Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:34:02 (301822): wrapper (7.7.26015): starting
00:34:02 (301822): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 00:34:02] Arguments: --nthreads 4
[2026-01-27 00:34:02] Threads: 4
[2026-01-27 00:34:02] Checking for CVMFS
[2026-01-27 00:34:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 00:34:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 00:34:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 00:34:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 00:34:02] 2.13.1.0 4237 657 62652 155566 0 188 8901310 10240001 1822 130560 0 785132 99.992 30095 435 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-01-27 00:34:02] CVMFS is ok
[2026-01-27 00:34:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 00:34:02] Checking for apptainer binary...
[2026-01-27 00:34:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 00:34:02] Running /usr/bin/apptainer --version
[2026-01-27 00:34:02] apptainer version 1.4.5
[2026-01-27 00:34:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 00:34:02] woolyvlneu
[2026-01-27 00:34:02] apptainer works
[2026-01-27 00:34:02] Set ATHENA_PROC_NUMBER=4
[2026-01-27 00:34:02] Set ATHENA_CORE_NUMBER=4
[2026-01-27 00:34:02] Starting ATLAS job with PandaID=6984061967
[2026-01-27 00:34:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 01:53:27]  *** The last 200 lines of the pilot log: ***
[2026-01-27 01:53:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-27 01:53:27]  replicas=None
[2026-01-27 01:53:27]  scope=mc23_13p6TeV
[2026-01-27 01:53:27]  status=None
[2026-01-27 01:53:27]  status_code=0
[2026-01-27 01:53:27]  storage_token=
[2026-01-27 01:53:27]  surl=/var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6984061967/log.48317872._002982.job.log.tgz.1
[2026-01-27 01:53:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/e1/log.48317872._002982.job.log.tgz.1
[2026-01-27 01:53:27]  workdir=None
[2026-01-27 01:53:27] ]
[2026-01-27 01:53:27] 2026-01-27 00:52:24,898 | INFO     | monitor loop #359: job 0:6984061967 is in state 'stageout'
[2026-01-27 01:53:27] 2026-01-27 00:52:24,899 | WARNING  | aborting job monitor tasks since payload process 310363 is not running
[2026-01-27 01:53:27] 2026-01-27 00:52:24,913 | INFO     | transferring file log.48317872._002982.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6984061967/log.48317872._002982.job.log.tgz.1 to /var/li
[2026-01-27 01:53:27] 2026-01-27 00:52:24,913 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6984061967/log.48317872._002982.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-01-27 01:53:27] 2026-01-27 00:52:24,930 | INFO     | adding to output.list: log.48317872._002982.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/e1/log.48317872._002982.job.log.tg
[2026-01-27 01:53:27] 2026-01-27 00:52:24,930 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 01:53:27] 2026-01-27 00:52:24,930 | INFO     | summary of transferred files:
[2026-01-27 01:53:27] 2026-01-27 00:52:24,930 | INFO     |  -- lfn=log.48317872._002982.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 01:53:27] 2026-01-27 00:52:24,931 | INFO     | stage-out finished correctly
[2026-01-27 01:53:27] 2026-01-27 00:52:25,066 | INFO     | time since job start (4689s) is within the limit (349056.0s)
[2026-01-27 01:53:27] 2026-01-27 00:52:27,072 | INFO     | time since job start (4691s) is within the limit (349056.0s)
[2026-01-27 01:53:27] 2026-01-27 00:52:27,403 | INFO     | monitor loop #360: job 0:6984061967 is in state 'finished'
[2026-01-27 01:53:27] 2026-01-27 00:52:27,403 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 01:53:27] 2026-01-27 00:52:27,975 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 01:53:27] 2026-01-27 00:52:29,078 | INFO     | time since job start (4693s) is within the limit (349056.0s)
[2026-01-27 01:53:27] 2026-01-27 00:52:29,906 | INFO     | monitor loop #361: job 0:6984061967 is in state 'finished'
[2026-01-27 01:53:27] 2026-01-27 00:52:29,906 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 01:53:27] 2026-01-27 00:52:30,656 | INFO     | job 6984061967 has state=finished
[2026-01-27 01:53:27] 2026-01-27 00:52:30,656 | INFO     | preparing for final server update for job 6984061967 in state='finished'
[2026-01-27 01:53:27] 2026-01-27 00:52:30,656 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6984061967/jobReport.json
[2026-01-27 01:53:27] 2026-01-27 00:52:30,657 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/2/workernode_map.json
[2026-01-27 01:53:27] 2026-01-27 00:52:30,657 | INFO     | this job has now completed (state=finished)
[2026-01-27 01:53:27] 2026-01-27 00:52:30,657 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 01:53:27] 2026-01-27 00:52:30,658 | INFO     | log transfer has been attempted: DONE
[2026-01-27 01:53:27] 2026-01-27 00:52:30,658 | INFO     | job 6984061967 has finished - writing final server update
[2026-01-27 01:53:27] 2026-01-27 00:52:30,658 | INFO     | total number of processed events: 400 (read)
[2026-01-27 01:53:27] 2026-01-27 00:52:30,659 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6984061967/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 01:53:27] 2026-01-27 00:52:30,659 | INFO     | extracted standard info from prmon json
[2026-01-27 01:53:27] 2026-01-27 00:52:30,659 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 01:53:27] 2026-01-27 00:52:30,659 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 01:53:27] 2026-01-27 00:52:30,660 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 01:53:27] 2026-01-27 00:52:30,660 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 01:53:27] 2026-01-27 00:52:30,660 | INFO     | fitting pss+swap vs Time
[2026-01-27 01:53:27] 2026-01-27 00:52:30,660 | INFO     | sum of square deviations: 106336877.5
[2026-01-27 01:53:27] 2026-01-27 00:52:30,660 | INFO     | sum of deviations: -5717950503.5
[2026-01-27 01:53:27] 2026-01-27 00:52:30,661 | INFO     | mean x: 1769472886.5
[2026-01-27 01:53:27] 2026-01-27 00:52:30,661 | INFO     | mean y: 2406659.5
[2026-01-27 01:53:27] 2026-01-27 00:52:30,661 | INFO     | intersect: 95150568051.50883
[2026-01-27 01:53:27] 2026-01-27 00:52:30,661 | INFO     | chi2: 0.014706963809066437
[2026-01-27 01:53:27] 2026-01-27 00:52:30,661 | INFO     | current memory leak: -53.77 B/s (using 70 data points, chi2=0.01)
[2026-01-27 01:53:27] 2026-01-27 00:52:30,661 | INFO     | could have reported an average CPU frequency of 3700 MHz (6 samples)
[2026-01-27 01:53:27] 2026-01-27 00:52:30,661 | INFO     | ..............................
[2026-01-27 01:53:27] 2026-01-27 00:52:30,661 | INFO     | . Timing measurements:
[2026-01-27 01:53:27] 2026-01-27 00:52:30,661 | INFO     | . get job = 0 s
[2026-01-27 01:53:27] 2026-01-27 00:52:30,661 | INFO     | . initial setup = 5 s
[2026-01-27 01:53:27] 2026-01-27 00:52:30,661 | INFO     | . payload setup = 5 s
[2026-01-27 01:53:27] 2026-01-27 00:52:30,661 | INFO     | . stage-in = 0 s
[2026-01-27 01:53:27] 2026-01-27 00:52:30,661 | INFO     | . payload execution = 4668 s
[2026-01-27 01:53:27] 2026-01-27 00:52:30,661 | INFO     | . stage-out = 0 s
[2026-01-27 01:53:27] 2026-01-27 00:52:30,661 | INFO     | . log creation = 0 s
[2026-01-27 01:53:27] 2026-01-27 00:52:30,661 | INFO     | ..............................
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | 
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | job summary report
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | --------------------------------------------------
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | PanDA job id: 6984061967
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | task id: 48317872
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | errors: (none)
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | pilot state: finished 
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | transexitcode: 0
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | exeerrorcode: 0
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | exeerrordiag: 
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | exitcode: 0
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | exitmsg: OK
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | cpuconsumptiontime: 17808 s
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | nevents: 400
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | neventsw: 0
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | pid: 310363
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | pgrp: 310363
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | corecount: 4
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | event service: False
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | sizes: {0: 2284246, 11: 2284246, 4677: 2319564, 4680: 2319564, 4683: 2319758}
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | --------------------------------------------------
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | 
[2026-01-27 01:53:27] 2026-01-27 00:52:30,690 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2026-01-27 01:53:27] 2026-01-27 00:52:30,710 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 01:53:27] 2026-01-27 00:52:30,710 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 01:53:27] 2026-01-27 00:52:30,710 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 01:53:27] 2026-01-27 00:52:30,710 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 01:53:27] 2026-01-27 00:52:30,710 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 01:53:27] 2026-01-27 00:52:30,710 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 01:53:27] 2026-01-27 00:52:30,710 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 01:53:27] 2026-01-27 00:52:30,710 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 01:53:27] 2026-01-27 00:52:30,711 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 01:53:27] 2026-01-27 00:52:30,711 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 01:53:27] 2026-01-27 00:52:30,711 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 01:53:27] 2026-01-27 00:52:30,711 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 01:53:27] 2026-01-27 00:52:30,711 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 01:53:27] 2026-01-27 00:52:30,711 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 01:53:27] 2026-01-27 00:52:30,711 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 01:53:27] 2026-01-27 00:52:30,711 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 01:53:27] 2026-01-27 00:52:30,711 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 01:53:27] 2026-01-27 00:52:30,711 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 01:53:27] 2026-01-27 00:52:30,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 01:53:27] 2026-01-27 00:52:30,711 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 01:53:27] 2026-01-27 00:52:30,711 | INFO     | job 6984061967 has completed (purged errors)
[2026-01-27 01:53:27] 2026-01-27 00:52:30,711 | INFO     | overall cleanup function is called
[2026-01-27 01:53:27] 2026-01-27 00:52:31,719 | INFO     | --- collectZombieJob: --- 10, [310363]
[2026-01-27 01:53:27] 2026-01-27 00:52:31,719 | INFO     | zombie collector waiting for pid 310363
[2026-01-27 01:53:27] 2026-01-27 00:52:31,719 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 01:53:27] 2026-01-27 00:52:31,719 | INFO     | collected zombie processes
[2026-01-27 01:53:27] 2026-01-27 00:52:31,719 | INFO     | will attempt to kill all subprocesses of pid=310363
[2026-01-27 01:53:27] 2026-01-27 00:52:31,802 | INFO     | process IDs to be killed: [310363] (in reverse order)
[2026-01-27 01:53:27] 2026-01-27 00:52:31,841 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 01:53:27] 2026-01-27 00:52:31,841 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 01:53:27] 2026-01-27 00:52:31,843 | INFO     | did not find any defunct processes belonging to 310363
[2026-01-27 01:53:27] 2026-01-27 00:52:31,845 | INFO     | did not find any defunct processes belonging to 310363
[2026-01-27 01:53:27] 2026-01-27 00:52:31,845 | INFO     | ready for new job
[2026-01-27 01:53:27] 2026-01-27 00:52:31,845 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 01:53:27] 2026-01-27 00:52:31,846 | INFO     | **************************************
[2026-01-27 01:53:27] 2026-01-27 00:52:31,846 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 01:53:27] 2026-01-27 00:52:31,846 | INFO     | **************************************
[2026-01-27 01:53:27] 2026-01-27 00:52:31,846 | INFO     | 
[2026-01-27 01:53:27] 2026-01-27 00:52:31,847 | INFO     | pilot is running in a VM
[2026-01-27 01:53:27] 2026-01-27 00:52:31,847 | INFO     | architecture information:
[2026-01-27 01:53:27] 2026-01-27 00:52:31,847 | INFO     | executing command: cat /etc/os-release
[2026-01-27 01:53:27] 2026-01-27 00:52:31,860 | INFO     | cat /etc/os-release:
[2026-01-27 01:53:27] NAME="CentOS Linux"
[2026-01-27 01:53:27] VERSION="7 (Core)"
[2026-01-27 01:53:27] ID="centos"
[2026-01-27 01:53:27] ID_LIKE="rhel fedora"
[2026-01-27 01:53:27] VERSION_ID="7"
[2026-01-27 01:53:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 01:53:27] ANSI_COLOR="0;31"
[2026-01-27 01:53:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 01:53:27] HOME_URL="https://www.centos.org/"
[2026-01-27 01:53:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 01:53:27] 
[2026-01-27 01:53:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 01:53:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 01:53:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 01:53:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 01:53:27] 
[2026-01-27 01:53:27] 2026-01-27 00:52:31,860 | INFO     | **************************************
[2026-01-27 01:53:27] 2026-01-27 00:52:32,363 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2026-01-27 01:53:27] 2026-01-27 00:52:32,375 | INFO     | sufficient remaining disk space (43461378048 B)
[2026-01-27 01:53:27] 2026-01-27 00:52:32,375 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 01:53:27] 2026-01-27 00:52:32,375 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 01:53:27] 2026-01-27 00:52:32,375 | INFO     | update_server=False
[2026-01-27 01:53:27] 2026-01-27 00:52:32,375 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 01:53:27] 2026-01-27 00:52:32,375 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 01:53:27] 2026-01-27 00:52:32,408 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 01:53:27] 2026-01-27 00:52:32,408 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 01:53:27] 2026-01-27 00:52:32,408 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 01:53:27] 2026-01-27 00:52:32,408 | INFO     | will abort loop
[2026-01-27 01:53:27] 2026-01-27 00:52:32,977 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 01:53:27] 2026-01-27 00:52:33,381 | INFO     | [job] retrieve thread has finished
[2026-01-27 01:53:27] 2026-01-27 00:52:33,381 | INFO     | [job] queue monitor thread has finished
[2026-01-27 01:53:27] 2026-01-27 00:52:33,414 | INFO     | [job] job monitor thread has finished
[2026-01-27 01:53:27] 2026-01-27 00:52:33,438 | INFO     | all payload control threads have been joined
[2026-01-27 01:53:27] 2026-01-27 00:52:33,438 | INFO     | all data control threads have been joined
[2026-01-27 01:53:27] 2026-01-27 00:52:33,493 | INFO     | [payload] validate_post thread has finished
[2026-01-27 01:53:27] 2026-01-27 00:52:33,635 | INFO     | all job control threads have been joined
[2026-01-27 01:53:27] 2026-01-27 00:52:33,998 | INFO     | [job] validate thread has finished
[2026-01-27 01:53:27] 2026-01-27 00:52:34,012 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 01:53:27] 2026-01-27 00:52:34,086 | INFO     | [payload] failed_post thread has finished
[2026-01-27 01:53:27] 2026-01-27 00:52:34,099 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 01:53:27] 2026-01-27 00:52:34,144 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 01:53:27] 2026-01-27 00:52:34,255 | INFO     | [data] copytool_in thread has finished
[2026-01-27 01:53:27] 2026-01-27 00:52:34,443 | INFO     | [data] control thread has finished
[2026-01-27 01:53:27] 2026-01-27 00:52:34,443 | INFO     | [payload] control thread has finished
[2026-01-27 01:53:27] 2026-01-27 00:52:34,470 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 01:53:27] 2026-01-27 00:52:34,641 | INFO     | [job] control thread has finished
[2026-01-27 01:53:27] 2026-01-27 00:52:34,983 | INFO     | [data] copytool_out thread has finished
[2026-01-27 01:53:27] 2026-01-27 00:52:38,019 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 01:53:27] 2026-01-27 00:52:42,845 | INFO     | job.realtimelogging is not enabled
[2026-01-27 01:53:27] 2026-01-27 00:52:43,851 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 01:53:27] 2026-01-27 00:53:02,254 | INFO     | PID=305833 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 01:53:27] 2026-01-27 00:53:02,254 | INFO     | .. there are 2 such processes running
[2026-01-27 01:53:27] 2026-01-27 00:53:02,254 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 01:53:27] 2026-01-27 00:53:02,254 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 01:53:27] 2026-01-27 00:53:02,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 01:53:27] 2026-01-27 00:53:21,535 | INFO     | [monitor] cgroup control has ended
[2026-01-27 01:53:27] 2026-01-27 00:53:22,540 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134344941315904)>', '<ExcThread(monitor, started 134344161097472)>']
[2026-01-27 01:53:27] 2026-01-27 00:53:23,366 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 01:53:27] 2026-01-27 00:53:23,367 | INFO     | [monitor] control thread has ended
[2026-01-27 01:53:27] 2026-01-27 00:53:27,566 | INFO     | all workflow threads have been joined
[2026-01-27 01:53:27] 2026-01-27 00:53:27,566 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 01:53:27] 2026-01-27 00:53:27,566 | INFO     | traces error code: 0
[2026-01-27 01:53:27] 2026-01-27 00:53:27,566 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 01:53:27] 2026-01-27 00:53:27,624 [wrapper] ==== pilot stdout END ====
[2026-01-27 01:53:27] 2026-01-27 00:53:27,627 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 01:53:27] 2026-01-27 00:53:27,630 [wrapper] pilotpid: 305833
[2026-01-27 01:53:27] 2026-01-27 00:53:27,633 [wrapper] Pilot exit status: 0
[2026-01-27 01:53:27] 2026-01-27 00:53:27,644 [wrapper] pandaids: 6984061967
[2026-01-27 01:53:27] 2026-01-27 00:53:27,682 [wrapper] cleanup supervisor_pilot  333135 305834
[2026-01-27 01:53:27] 2026-01-27 00:53:27,685 [wrapper] Test setup, not cleaning
[2026-01-27 01:53:27] 2026-01-27 00:53:27,688 [wrapper] apfmon messages muted
[2026-01-27 01:53:27] 2026-01-27 00:53:27,691 [wrapper] ==== wrapper stdout END ====
[2026-01-27 01:53:27] 2026-01-27 00:53:27,694 [wrapper] ==== wrapper stderr END ====
[2026-01-27 01:53:27]  *** Error codes and diagnostics ***
[2026-01-27 01:53:27]     "exeErrorCode": 0,
[2026-01-27 01:53:27]     "exeErrorDiag": "",
[2026-01-27 01:53:27]     "pilotErrorCode": 0,
[2026-01-27 01:53:27]     "pilotErrorDiag": "",
[2026-01-27 01:53:27]  *** Listing of results directory ***
[2026-01-27 01:53:27] insgesamt 660012
[2026-01-27 01:53:27] -rw-r--r-- 1 yeti boinc    584422 Jan 26 08:37 pilot3.tar.gz
[2026-01-27 01:53:27] -rw-r--r-- 1 yeti boinc      5111 Jan 26 08:38 queuedata.json
[2026-01-27 01:53:27] -rwx------ 1 yeti boinc     36322 Jan 26 08:38 runpilot2-wrapper.sh
[2026-01-27 01:53:27] -rw-r--r-- 1 yeti boinc       100 Jan 27 00:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 01:53:27] -rwxr-xr-x 1 yeti boinc      7986 Jan 27 00:34 run_atlas
[2026-01-27 01:53:27] -rw-r--r-- 1 yeti boinc       105 Jan 27 00:34 job.xml
[2026-01-27 01:53:27] -rw-r--r-- 2 yeti boinc 489781556 Jan 27 00:34 EVNT.48317869._000060.pool.root.1
[2026-01-27 01:53:27] -rw-r--r-- 2 yeti boinc     15845 Jan 27 00:34 start_atlas.sh
[2026-01-27 01:53:27] drwxrwx--x 2 yeti boinc      4096 Jan 27 00:34 shared
[2026-01-27 01:53:27] -rw-r--r-- 2 yeti boinc    597751 Jan 27 00:34 input.tar.gz
[2026-01-27 01:53:27] -rw-r--r-- 1 yeti boinc      6560 Jan 27 00:34 init_data.xml
[2026-01-27 01:53:27] -rw-r--r-- 1 yeti boinc         0 Jan 27 00:34 boinc_setup_complete
[2026-01-27 01:53:27] -rw-r--r-- 1 yeti boinc         0 Jan 27 00:34 boinc_lockfile
[2026-01-27 01:53:27] -rw-r--r-- 1 yeti boinc      2514 Jan 27 00:34 pandaJob.out
[2026-01-27 01:53:27] -rw------- 1 yeti boinc        52 Jan 27 00:34 setup.sh.local
[2026-01-27 01:53:27] -rw------- 1 yeti boinc   1006441 Jan 27 00:34 agis_schedconf.cvmfs.json
[2026-01-27 01:53:27] -rw------- 1 yeti boinc   1516246 Jan 27 00:34 agis_ddmendpoints.agis.ALL.json
[2026-01-27 01:53:27] -rw------- 1 yeti boinc       423 Jan 27 00:34 workernode_map.json
[2026-01-27 01:53:27] drwx------ 5 yeti boinc      4096 Jan 27 00:34 pilot3
[2026-01-27 01:53:27] -rw-r--r-- 1 yeti boinc       530 Jan 27 01:52 boinc_task_state.xml
[2026-01-27 01:53:27] -rw------- 1 yeti boinc 180167327 Jan 27 01:52 HITS.48317872._002982.pool.root.1
[2026-01-27 01:53:27] -rw------- 1 yeti boinc      1014 Jan 27 01:52 memory_monitor_summary.json
[2026-01-27 01:53:27] -rw------- 1 yeti boinc    272249 Jan 27 01:52 log.48317872._002982.job.log.tgz.1
[2026-01-27 01:53:27] -rw------- 1 yeti boinc      6276 Jan 27 01:52 heartbeat.json
[2026-01-27 01:53:27] -rw------- 1 yeti boinc        95 Jan 27 01:53 pilot_heartbeat.json
[2026-01-27 01:53:27] -rw-r--r-- 1 yeti boinc      8192 Jan 27 01:53 boinc_mmap_file
[2026-01-27 01:53:27] -rw-r--r-- 1 yeti boinc        27 Jan 27 01:53 wrapper_checkpoint.txt
[2026-01-27 01:53:27] -rw------- 1 yeti boinc      5152 Jan 27 01:53 pilotlog.txt
[2026-01-27 01:53:27] -rw------- 1 yeti boinc    707026 Jan 27 01:53 log.48317872._002982.job.log.1
[2026-01-27 01:53:27] -rw------- 1 yeti boinc       357 Jan 27 01:53 output.list
[2026-01-27 01:53:27] -rw-r--r-- 1 yeti boinc       620 Jan 27 01:53 runtime_log
[2026-01-27 01:53:27] -rw------- 1 yeti boinc    993280 Jan 27 01:53 result.tar.gz
[2026-01-27 01:53:27] -rw-r--r-- 1 yeti boinc      9551 Jan 27 01:53 runtime_log.err
[2026-01-27 01:53:27] -rw------- 1 yeti boinc       638 Jan 27 01:53 DGjNDmeMW48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZI9KDm1dZi2n.diag
[2026-01-27 01:53:27] -rw-r--r-- 1 yeti boinc     21552 Jan 27 01:53 stderr.txt
[2026-01-27 01:53:27] HITS file was successfully produced:
[2026-01-27 01:53:27] -rw------- 1 yeti boinc 180167327 Jan 27 01:52 shared/HITS.pool.root.1
[2026-01-27 01:53:27]  *** Contents of shared directory: ***
[2026-01-27 01:53:27] insgesamt 655832
[2026-01-27 01:53:27] -rw-r--r-- 2 yeti boinc 489781556 Jan 27 00:34 ATLAS.root_0
[2026-01-27 01:53:27] -rw-r--r-- 2 yeti boinc     15845 Jan 27 00:34 start_atlas.sh
[2026-01-27 01:53:27] -rw-r--r-- 2 yeti boinc    597751 Jan 27 00:34 input.tar.gz
[2026-01-27 01:53:27] -rw------- 1 yeti boinc 180167327 Jan 27 01:52 HITS.pool.root.1
[2026-01-27 01:53:27] -rw------- 1 yeti boinc    993280 Jan 27 01:53 result.tar.gz
01:53:29 (301822): run_atlas exited; CPU time 17863.315040
01:53:29 (301822): called boinc_finish(0)

</stderr_txt>
]]>

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