Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:46:27 (3830): wrapper (7.7.26015): starting
22:46:27 (3830): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 22:46:27] Arguments: --nthreads 8
[2026-01-26 22:46:27] Threads: 8
[2026-01-26 22:46:27] Checking for CVMFS
[2026-01-26 22:46:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 22:46:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 22:46:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 22:46:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 22:46:30] 2.11.2.0 10131 60454 134100 155562 3 54 15131592 25165825 899 130560 0 20658340 99.796 15578072 3717 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-26 22:46:30] CVMFS is ok
[2026-01-26 22:46:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 22:46:30] Checking for apptainer binary...
[2026-01-26 22:46:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 22:46:30] Running /usr/bin/apptainer --version
[2026-01-26 22:46:30] apptainer version 1.3.2-1.el7
[2026-01-26 22:46:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 22:46:46] cg-vwn460.simple-grid.lan
[2026-01-26 22:46:46] apptainer works
[2026-01-26 22:46:46] Set ATHENA_PROC_NUMBER=8
[2026-01-26 22:46:46] Set ATHENA_CORE_NUMBER=8
[2026-01-26 22:46:46] Starting ATLAS job with PandaID=6983771488
[2026-01-26 22:46:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 02:28:41]  *** The last 200 lines of the pilot log: ***
[2026-01-27 02:28:41] 2026-01-27 01:27:27,853 | INFO     | total number of processed events: 400 (read)
[2026-01-27 02:28:41] 2026-01-27 01:27:27,855 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6983771488/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 02:28:41] 2026-01-27 01:27:27,855 | INFO     | extracted standard info from prmon json
[2026-01-27 02:28:41] 2026-01-27 01:27:27,856 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 02:28:41] 2026-01-27 01:27:27,856 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 02:28:41] 2026-01-27 01:27:27,856 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 02:28:41] 2026-01-27 01:27:27,856 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 02:28:41] 2026-01-27 01:27:27,860 | INFO     | fitting pss+swap vs Time
[2026-01-27 02:28:41] 2026-01-27 01:27:27,861 | INFO     | sum of square deviations: 2710627567.5
[2026-01-27 02:28:41] 2026-01-27 01:27:27,862 | INFO     | sum of deviations: 84646243770.49998
[2026-01-27 02:28:41] 2026-01-27 01:27:27,866 | INFO     | mean x: 1769470951.5
[2026-01-27 02:28:41] 2026-01-27 01:27:27,867 | INFO     | mean y: 2418313.4126213593
[2026-01-27 02:28:41] 2026-01-27 01:27:27,867 | INFO     | intersect: -55253815077.45049
[2026-01-27 02:28:41] 2026-01-27 01:27:27,867 | INFO     | chi2: 6.0365594726269505
[2026-01-27 02:28:41] 2026-01-27 01:27:27,868 | INFO     | sum of square deviations: 2518000700.0
[2026-01-27 02:28:41] 2026-01-27 01:27:27,869 | INFO     | sum of deviations: 95770457927.0
[2026-01-27 02:28:41] 2026-01-27 01:27:27,869 | INFO     | mean x: 1769470799.0
[2026-01-27 02:28:41] 2026-01-27 01:27:27,869 | INFO     | mean y: 2426907.3333333335
[2026-01-27 02:28:41] 2026-01-27 01:27:27,869 | INFO     | intersect: -67298201209.523254
[2026-01-27 02:28:41] 2026-01-27 01:27:27,870 | INFO     | chi2: 5.313825173327693
[2026-01-27 02:28:41] 2026-01-27 01:27:27,870 | INFO     | current chi2=5.313825173327693 (change=11.972619545562807 %)
[2026-01-27 02:28:41] 2026-01-27 01:27:27,870 | INFO     | right removable region: 200
[2026-01-27 02:28:41] 2026-01-27 01:27:27,870 | INFO     | sum of square deviations: 2518000700.0
[2026-01-27 02:28:41] 2026-01-27 01:27:27,872 | INFO     | sum of deviations: 17099845984.000004
[2026-01-27 02:28:41] 2026-01-27 01:27:27,872 | INFO     | mean x: 1769471104.0
[2026-01-27 02:28:41] 2026-01-27 01:27:27,872 | INFO     | mean y: 2471722.6716417912
[2026-01-27 02:28:41] 2026-01-27 01:27:27,872 | INFO     | intersect: -12014079087.476446
[2026-01-27 02:28:41] 2026-01-27 01:27:27,873 | INFO     | chi2: 1.6902759284676643
[2026-01-27 02:28:41] 2026-01-27 01:27:27,873 | INFO     | current chi2=1.6902759284676643 (change=71.99934936229327 %)
[2026-01-27 02:28:41] 2026-01-27 01:27:27,873 | INFO     | sum of square deviations: 2334722845.0
[2026-01-27 02:28:41] 2026-01-27 01:27:27,874 | INFO     | sum of deviations: -8023872351.0
[2026-01-27 02:28:41] 2026-01-27 01:27:27,875 | INFO     | mean x: 1769471256.5
[2026-01-27 02:28:41] 2026-01-27 01:27:27,875 | INFO     | mean y: 2492414.1938775512
[2026-01-27 02:28:41] 2026-01-27 01:27:27,875 | INFO     | intersect: 6083733072.512608
[2026-01-27 02:28:41] 2026-01-27 01:27:27,875 | INFO     | chi2: 0.8211765291895468
[2026-01-27 02:28:41] 2026-01-27 01:27:27,875 | INFO     | current chi2=0.8211765291895468 (change=51.41760493897631 %)
[2026-01-27 02:28:41] 2026-01-27 01:27:27,876 | INFO     | sum of square deviations: 2160561440.0
[2026-01-27 02:28:41] 2026-01-27 01:27:27,877 | INFO     | sum of deviations: -5094554202.000001
[2026-01-27 02:28:41] 2026-01-27 01:27:27,877 | INFO     | mean x: 1769471409.0
[2026-01-27 02:28:41] 2026-01-27 01:27:27,877 | INFO     | mean y: 2489801.780104712
[2026-01-27 02:28:41] 2026-01-27 01:27:27,877 | INFO     | intersect: 4174862702.2424083
[2026-01-27 02:28:41] 2026-01-27 01:27:27,878 | INFO     | chi2: 0.7976140621182505
[2026-01-27 02:28:41] 2026-01-27 01:27:27,878 | INFO     | current chi2=0.7976140621182505 (change=2.869354667814368 %)
[2026-01-27 02:28:41] 2026-01-27 01:27:27,878 | INFO     | left removable region: 30
[2026-01-27 02:28:41] 2026-01-27 01:27:27,878 | INFO     | sum of square deviations: 1523386702.5
[2026-01-27 02:28:41] 2026-01-27 01:27:27,879 | INFO     | sum of deviations: 3231023996.5
[2026-01-27 02:28:41] 2026-01-27 01:27:27,880 | INFO     | mean x: 1769471683.5
[2026-01-27 02:28:41] 2026-01-27 01:27:27,880 | INFO     | mean y: 2505029.7470588237
[2026-01-27 02:28:41] 2026-01-27 01:27:27,880 | INFO     | intersect: -3750452417.7174354
[2026-01-27 02:28:41] 2026-01-27 01:27:27,880 | INFO     | chi2: 0.001037147290796886
[2026-01-27 02:28:41] 2026-01-27 01:27:27,880 | INFO     | current memory leak: 2.12 B/s (using 170 data points, chi2=0.00)
[2026-01-27 02:28:41] 2026-01-27 01:27:27,881 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2026-01-27 02:28:41] 2026-01-27 01:27:27,881 | INFO     | ..............................
[2026-01-27 02:28:41] 2026-01-27 01:27:27,881 | INFO     | . Timing measurements:
[2026-01-27 02:28:41] 2026-01-27 01:27:27,881 | INFO     | . get job = 0 s
[2026-01-27 02:28:41] 2026-01-27 01:27:27,881 | INFO     | . initial setup = 134 s
[2026-01-27 02:28:41] 2026-01-27 01:27:27,881 | INFO     | . payload setup = 165 s
[2026-01-27 02:28:41] 2026-01-27 01:27:27,882 | INFO     | . stage-in = 0 s
[2026-01-27 02:28:41] 2026-01-27 01:27:27,882 | INFO     | . payload execution = 12664 s
[2026-01-27 02:28:41] 2026-01-27 01:27:27,882 | INFO     | . stage-out = 8 s
[2026-01-27 02:28:41] 2026-01-27 01:27:27,882 | INFO     | . log creation = 1 s
[2026-01-27 02:28:41] 2026-01-27 01:27:27,882 | INFO     | ..............................
[2026-01-27 02:28:41] 2026-01-27 01:27:28,017 | INFO     | 
[2026-01-27 02:28:41] 2026-01-27 01:27:28,018 | INFO     | job summary report
[2026-01-27 02:28:41] 2026-01-27 01:27:28,018 | INFO     | --------------------------------------------------
[2026-01-27 02:28:41] 2026-01-27 01:27:28,018 | INFO     | PanDA job id: 6983771488
[2026-01-27 02:28:41] 2026-01-27 01:27:28,018 | INFO     | task id: 48310670
[2026-01-27 02:28:41] 2026-01-27 01:27:28,018 | INFO     | errors: (none)
[2026-01-27 02:28:41] 2026-01-27 01:27:28,018 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 02:28:41] 2026-01-27 01:27:28,018 | INFO     | pilot state: finished 
[2026-01-27 02:28:41] 2026-01-27 01:27:28,018 | INFO     | transexitcode: 0
[2026-01-27 02:28:41] 2026-01-27 01:27:28,019 | INFO     | exeerrorcode: 0
[2026-01-27 02:28:41] 2026-01-27 01:27:28,019 | INFO     | exeerrordiag: 
[2026-01-27 02:28:41] 2026-01-27 01:27:28,019 | INFO     | exitcode: 0
[2026-01-27 02:28:41] 2026-01-27 01:27:28,019 | INFO     | exitmsg: OK
[2026-01-27 02:28:41] 2026-01-27 01:27:28,019 | INFO     | cpuconsumptiontime: 47513 s
[2026-01-27 02:28:41] 2026-01-27 01:27:28,019 | INFO     | nevents: 400
[2026-01-27 02:28:41] 2026-01-27 01:27:28,019 | INFO     | neventsw: 0
[2026-01-27 02:28:41] 2026-01-27 01:27:28,019 | INFO     | pid: 12307
[2026-01-27 02:28:41] 2026-01-27 01:27:28,019 | INFO     | pgrp: 12307
[2026-01-27 02:28:41] 2026-01-27 01:27:28,019 | INFO     | corecount: 8
[2026-01-27 02:28:41] 2026-01-27 01:27:28,020 | INFO     | event service: False
[2026-01-27 02:28:41] 2026-01-27 01:27:28,020 | INFO     | sizes: {0: 2283101, 1: 2283786, 2: 2284247, 12: 2284247, 12834: 2314181, 12835: 2314180, 12844: 2323362, 12848: 2323612}
[2026-01-27 02:28:41] 2026-01-27 01:27:28,020 | INFO     | --------------------------------------------------
[2026-01-27 02:28:41] 2026-01-27 01:27:28,020 | INFO     | 
[2026-01-27 02:28:41] 2026-01-27 01:27:28,020 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-27 02:28:41] 2026-01-27 01:27:28,467 | INFO     | time since job start (12861s) is within the limit (349056.0s)
[2026-01-27 02:28:41] 2026-01-27 01:27:28,618 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 02:28:41] 2026-01-27 01:27:28,619 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 02:28:41] 2026-01-27 01:27:28,619 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 02:28:41] 2026-01-27 01:27:28,619 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 02:28:41] 2026-01-27 01:27:28,619 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 02:28:41] 2026-01-27 01:27:28,619 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 02:28:41] 2026-01-27 01:27:28,619 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 02:28:41] 2026-01-27 01:27:28,619 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 02:28:41] 2026-01-27 01:27:28,619 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 02:28:41] 2026-01-27 01:27:28,619 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 02:28:41] 2026-01-27 01:27:28,619 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 02:28:41] 2026-01-27 01:27:28,620 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 02:28:41] 2026-01-27 01:27:28,620 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 02:28:41] 2026-01-27 01:27:28,620 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 02:28:41] 2026-01-27 01:27:28,620 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 02:28:41] 2026-01-27 01:27:28,620 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 02:28:41] 2026-01-27 01:27:28,620 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 02:28:41] 2026-01-27 01:27:28,620 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 02:28:41] 2026-01-27 01:27:28,620 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 02:28:41] 2026-01-27 01:27:28,620 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 02:28:41] 2026-01-27 01:27:28,621 | INFO     | job 6983771488 has completed (purged errors)
[2026-01-27 02:28:41] 2026-01-27 01:27:28,621 | INFO     | overall cleanup function is called
[2026-01-27 02:28:41] 2026-01-27 01:27:29,630 | INFO     | --- collectZombieJob: --- 10, [12307]
[2026-01-27 02:28:41] 2026-01-27 01:27:29,630 | INFO     | zombie collector waiting for pid 12307
[2026-01-27 02:28:41] 2026-01-27 01:27:29,630 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 02:28:41] 2026-01-27 01:27:29,630 | INFO     | collected zombie processes
[2026-01-27 02:28:41] 2026-01-27 01:27:29,630 | INFO     | will attempt to kill all subprocesses of pid=12307
[2026-01-27 02:28:41] 2026-01-27 01:27:29,720 | INFO     | process IDs to be killed: [12307] (in reverse order)
[2026-01-27 02:28:41] 2026-01-27 01:27:30,706 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 02:28:41] 2026-01-27 01:27:30,706 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 02:28:41] 2026-01-27 01:27:30,708 | INFO     | did not find any defunct processes belonging to 12307
[2026-01-27 02:28:41] 2026-01-27 01:27:30,710 | INFO     | did not find any defunct processes belonging to 12307
[2026-01-27 02:28:41] 2026-01-27 01:27:30,710 | INFO     | ready for new job
[2026-01-27 02:28:41] 2026-01-27 01:27:30,710 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 02:28:41] 2026-01-27 01:27:30,716 | INFO     | **************************************
[2026-01-27 02:28:41] 2026-01-27 01:27:30,716 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 02:28:41] 2026-01-27 01:27:30,717 | INFO     | **************************************
[2026-01-27 02:28:41] 2026-01-27 01:27:30,717 | INFO     | 
[2026-01-27 02:28:41] 2026-01-27 01:27:30,717 | INFO     | pilot is running in a VM
[2026-01-27 02:28:41] 2026-01-27 01:27:30,717 | INFO     | architecture information:
[2026-01-27 02:28:41] 2026-01-27 01:27:30,726 | INFO     | executing command: cat /etc/os-release
[2026-01-27 02:28:41] 2026-01-27 01:27:31,084 | INFO     | cat /etc/os-release:
[2026-01-27 02:28:41] NAME="CentOS Linux"
[2026-01-27 02:28:41] VERSION="7 (Core)"
[2026-01-27 02:28:41] ID="centos"
[2026-01-27 02:28:41] ID_LIKE="rhel fedora"
[2026-01-27 02:28:41] VERSION_ID="7"
[2026-01-27 02:28:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 02:28:41] ANSI_COLOR="0;31"
[2026-01-27 02:28:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 02:28:41] HOME_URL="https://www.centos.org/"
[2026-01-27 02:28:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 02:28:41] 
[2026-01-27 02:28:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 02:28:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 02:28:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 02:28:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 02:28:41] 
[2026-01-27 02:28:41] 2026-01-27 01:27:31,084 | INFO     | **************************************
[2026-01-27 02:28:41] 2026-01-27 01:27:31,591 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-27 02:28:41] 2026-01-27 01:27:31,862 | INFO     | sufficient remaining disk space (495492005888 B)
[2026-01-27 02:28:41] 2026-01-27 01:27:31,862 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 02:28:41] 2026-01-27 01:27:31,863 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 02:28:41] 2026-01-27 01:27:31,863 | INFO     | update_server=False
[2026-01-27 02:28:41] 2026-01-27 01:27:31,863 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 02:28:41] 2026-01-27 01:27:32,124 | INFO     | all data control threads have been joined
[2026-01-27 02:28:41] 2026-01-27 01:27:32,236 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 02:28:41] 2026-01-27 01:27:32,413 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 02:28:41] 2026-01-27 01:27:32,413 | INFO     | aborting loop
[2026-01-27 02:28:41] 2026-01-27 01:27:32,469 | INFO     | all payload control threads have been joined
[2026-01-27 02:28:41] 2026-01-27 01:27:32,774 | INFO     | all job control threads have been joined
[2026-01-27 02:28:41] 2026-01-27 01:27:32,869 | INFO     | [job] retrieve thread has finished
[2026-01-27 02:28:41] 2026-01-27 01:27:33,032 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 02:28:41] 2026-01-27 01:27:33,077 | INFO     | [payload] validate_post thread has finished
[2026-01-27 02:28:41] 2026-01-27 01:27:33,130 | INFO     | [data] control thread has finished
[2026-01-27 02:28:41] 2026-01-27 01:27:33,167 | INFO     | [data] copytool_in thread has finished
[2026-01-27 02:28:41] 2026-01-27 01:27:33,195 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 02:28:41] 2026-01-27 01:27:33,419 | INFO     | [job] job monitor thread has finished
[2026-01-27 02:28:41] 2026-01-27 01:27:33,452 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 02:28:41] 2026-01-27 01:27:33,458 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 02:28:41] 2026-01-27 01:27:33,475 | INFO     | [payload] control thread has finished
[2026-01-27 02:28:41] 2026-01-27 01:27:33,553 | INFO     | [payload] failed_post thread has finished
[2026-01-27 02:28:41] 2026-01-27 01:27:33,603 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 02:28:41] 2026-01-27 01:27:33,634 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 02:28:41] 2026-01-27 01:27:33,781 | INFO     | [job] control thread has finished
[2026-01-27 02:28:41] 2026-01-27 01:27:33,894 | INFO     | [job] validate thread has finished
[2026-01-27 02:28:41] 2026-01-27 01:27:34,038 | INFO     | [job] queue monitor thread has finished
[2026-01-27 02:28:41] 2026-01-27 01:27:34,243 | INFO     | [data] copytool_out thread has finished
[2026-01-27 02:28:41] 2026-01-27 01:27:37,461 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 02:28:41] 2026-01-27 01:28:00,489 | INFO     | 12997s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-27 02:28:41] 2026-01-27 01:28:01,593 | INFO     | PID=7810 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-27 02:28:41] 2026-01-27 01:28:01,593 | INFO     | .. there are 2 such processes running
[2026-01-27 02:28:41] 2026-01-27 01:28:01,594 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 02:28:41] 2026-01-27 01:28:01,594 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 02:28:41] 2026-01-27 01:28:01,594 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 02:28:41] 2026-01-27 01:28:29,243 | INFO     | [monitor] cgroup control has ended
[2026-01-27 02:28:41] 2026-01-27 01:28:31,297 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140183544502080)>', '<ExcThread(monitor, started 140182833592064)>']
[2026-01-27 02:28:41] 2026-01-27 01:28:31,773 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 02:28:41] 2026-01-27 01:28:31,774 | INFO     | [monitor] control thread has ended
[2026-01-27 02:28:41] 2026-01-27 01:28:36,323 | INFO     | all workflow threads have been joined
[2026-01-27 02:28:41] 2026-01-27 01:28:36,323 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 02:28:41] 2026-01-27 01:28:36,323 | INFO     | traces error code: 0
[2026-01-27 02:28:41] 2026-01-27 01:28:36,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 02:28:41] 2026-01-27 01:28:36,727 [wrapper] ==== pilot stdout END ====
[2026-01-27 02:28:41] 2026-01-27 01:28:36,811 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 02:28:41] 2026-01-27 01:28:36,904 [wrapper] pilotpid: 7810
[2026-01-27 02:28:41] 2026-01-27 01:28:37,009 [wrapper] Pilot exit status: 0
[2026-01-27 02:28:41] 2026-01-27 01:28:37,481 [wrapper] pandaids: 6983771488
[2026-01-27 02:28:41] 2026-01-27 01:28:38,408 [wrapper] cleanup supervisor_pilot 18246 7811
[2026-01-27 02:28:41] 2026-01-27 01:28:38,514 [wrapper] Test setup, not cleaning
[2026-01-27 02:28:41] 2026-01-27 01:28:38,613 [wrapper] apfmon messages muted
[2026-01-27 02:28:41] 2026-01-27 01:28:38,705 [wrapper] ==== wrapper stdout END ====
[2026-01-27 02:28:41] 2026-01-27 01:28:38,796 [wrapper] ==== wrapper stderr END ====
[2026-01-27 02:28:41]  *** Error codes and diagnostics ***
[2026-01-27 02:28:41]     "exeErrorCode": 0,
[2026-01-27 02:28:41]     "exeErrorDiag": "",
[2026-01-27 02:28:41]     "pilotErrorCode": 0,
[2026-01-27 02:28:41]     "pilotErrorDiag": "",
[2026-01-27 02:28:41]  *** Listing of results directory ***
[2026-01-27 02:28:41] total 667208
[2026-01-27 02:28:41] -rw-r--r--. 1 boinc boinc      5111 Jan 26 02:12 queuedata.json
[2026-01-27 02:28:41] -rw-r--r--. 1 boinc boinc    584422 Jan 26 02:12 pilot3.tar.gz
[2026-01-27 02:28:41] -rwx------. 1 boinc boinc     36322 Jan 26 02:12 runpilot2-wrapper.sh
[2026-01-27 02:28:41] -rw-r--r--. 1 boinc boinc       100 Jan 26 22:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 02:28:41] -rwxr-xr-x. 1 boinc boinc      7986 Jan 26 22:46 run_atlas
[2026-01-27 02:28:41] -rw-r--r--. 1 boinc boinc       105 Jan 26 22:46 job.xml
[2026-01-27 02:28:41] -rw-r--r--. 1 boinc boinc      6391 Jan 26 22:46 init_data.xml
[2026-01-27 02:28:41] -rw-r--r--. 2 boinc boinc 494981762 Jan 26 22:46 EVNT.48310665._000182.pool.root.1
[2026-01-27 02:28:41] -rw-r--r--. 2 boinc boinc     15845 Jan 26 22:46 start_atlas.sh
[2026-01-27 02:28:41] drwxrwx--x. 2 boinc boinc        68 Jan 26 22:46 shared
[2026-01-27 02:28:41] -rw-r--r--. 2 boinc boinc    597774 Jan 26 22:46 input.tar.gz
[2026-01-27 02:28:41] -rw-r--r--. 1 boinc boinc         0 Jan 26 22:46 boinc_lockfile
[2026-01-27 02:28:41] -rw-r--r--. 1 boinc boinc      2522 Jan 26 22:46 pandaJob.out
[2026-01-27 02:28:41] -rw-------. 1 boinc boinc       413 Jan 26 22:52 workernode_map.json
[2026-01-27 02:28:41] -rw-------. 1 boinc boinc   1006433 Jan 26 22:53 agis_schedconf.cvmfs.json
[2026-01-27 02:28:41] drwx------. 5 boinc boinc      4096 Jan 26 22:53 pilot3
[2026-01-27 02:28:41] -rw-------. 1 boinc boinc 179728366 Jan 27 02:25 HITS.48310670._010702.pool.root.1
[2026-01-27 02:28:41] -rw-r--r--. 1 boinc boinc       532 Jan 27 02:26 boinc_task_state.xml
[2026-01-27 02:28:41] -rw-------. 1 boinc boinc      1011 Jan 27 02:27 memory_monitor_summary.json
[2026-01-27 02:28:41] -rw-------. 1 boinc boinc   1516246 Jan 27 02:27 agis_ddmendpoints.agis.ALL.json
[2026-01-27 02:28:41] -rw-------. 1 boinc boinc    470801 Jan 27 02:27 log.48310670._010702.job.log.tgz.1
[2026-01-27 02:28:41] -rw-------. 1 boinc boinc        95 Jan 27 02:27 pilot_heartbeat.json
[2026-01-27 02:28:41] -rw-------. 1 boinc boinc      6314 Jan 27 02:27 heartbeat.json
[2026-01-27 02:28:41] -rw-------. 1 boinc boinc      4995 Jan 27 02:28 pilotlog.txt
[2026-01-27 02:28:41] -rw-------. 1 boinc boinc   1822455 Jan 27 02:28 log.48310670._010702.job.log.1
[2026-01-27 02:28:41] -rw-------. 1 boinc boinc       357 Jan 27 02:28 output.list
[2026-01-27 02:28:41] -rw-r--r--. 1 boinc boinc       620 Jan 27 02:28 runtime_log
[2026-01-27 02:28:41] -rw-------. 1 boinc boinc   2314240 Jan 27 02:28 result.tar.gz
[2026-01-27 02:28:41] -rw-r--r--. 1 boinc boinc        28 Jan 27 02:28 wrapper_checkpoint.txt
[2026-01-27 02:28:41] -rw-------. 1 boinc boinc       654 Jan 27 02:28 v6EMDmIKQ48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmM71KDmnV8CBn.diag
[2026-01-27 02:28:41] -rw-r--r--. 1 boinc boinc      8816 Jan 27 02:28 runtime_log.err
[2026-01-27 02:28:41] -rw-r--r--. 1 boinc boinc      8192 Jan 27 02:28 boinc_mmap_file
[2026-01-27 02:28:41] -rw-r--r--. 1 boinc boinc     20746 Jan 27 02:28 stderr.txt
[2026-01-27 02:28:41] HITS file was successfully produced:
[2026-01-27 02:28:41] -rw-------. 1 boinc boinc 179728366 Jan 27 02:25 shared/HITS.pool.root.1
[2026-01-27 02:28:41]  *** Contents of shared directory: ***
[2026-01-27 02:28:42] total 661760
[2026-01-27 02:28:42] -rw-r--r--. 2 boinc boinc 494981762 Jan 26 22:46 ATLAS.root_0
[2026-01-27 02:28:42] -rw-r--r--. 2 boinc boinc     15845 Jan 26 22:46 start_atlas.sh
[2026-01-27 02:28:42] -rw-r--r--. 2 boinc boinc    597774 Jan 26 22:46 input.tar.gz
[2026-01-27 02:28:42] -rw-------. 1 boinc boinc 179728366 Jan 27 02:25 HITS.pool.root.1
[2026-01-27 02:28:42] -rw-------. 1 boinc boinc   2314240 Jan 27 02:28 result.tar.gz
02:28:43 (3830): run_atlas exited; CPU time 47644.008381
02:28:43 (3830): called boinc_finish(0)

</stderr_txt>
]]>

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