Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:16:32 (258822): wrapper (7.7.26015): starting
23:16:32 (258822): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 23:16:32] Arguments: --nthreads 4
[2026-01-26 23:16:32] Threads: 4
[2026-01-26 23:16:32] Checking for CVMFS
[2026-01-26 23:16:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 23:16:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 23:16:32] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 23:16:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 23:16:32] 2.13.1.0 4237 580 61636 155562 1 188 8878453 10240000 1822 130560 0 666006 99.993 24558 498 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-01-26 23:16:32] CVMFS is ok
[2026-01-26 23:16:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 23:16:32] Checking for apptainer binary...
[2026-01-26 23:16:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 23:16:32] Running /usr/bin/apptainer --version
[2026-01-26 23:16:32] apptainer version 1.4.5
[2026-01-26 23:16:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 23:16:33] woolyvlneu
[2026-01-26 23:16:33] apptainer works
[2026-01-26 23:16:33] Set ATHENA_PROC_NUMBER=4
[2026-01-26 23:16:33] Set ATHENA_CORE_NUMBER=4
[2026-01-26 23:16:33] Starting ATLAS job with PandaID=6983773565
[2026-01-26 23:16:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 00:33:57]  *** The last 200 lines of the pilot log: ***
[2026-01-27 00:33:57]  mtime=0
[2026-01-27 00:33:57]  protocol_id=None
[2026-01-27 00:33:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-27 00:33:57]  replicas=None
[2026-01-27 00:33:57]  scope=mc23_13p6TeV
[2026-01-27 00:33:57]  status=None
[2026-01-27 00:33:57]  status_code=0
[2026-01-27 00:33:57]  storage_token=
[2026-01-27 00:33:57]  surl=/var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6983773565/log.48318034._002693.job.log.tgz.1
[2026-01-27 00:33:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/df/log.48318034._002693.job.log.tgz.1
[2026-01-27 00:33:57]  workdir=None
[2026-01-27 00:33:57] ]
[2026-01-27 00:33:57] 2026-01-26 23:33:14,992 | INFO     | transferring file log.48318034._002693.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6983773565/log.48318034._002693.job.log.tgz.1 to /var/li
[2026-01-27 00:33:57] 2026-01-26 23:33:14,992 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6983773565/log.48318034._002693.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-01-27 00:33:57] 2026-01-26 23:33:15,011 | INFO     | adding to output.list: log.48318034._002693.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/df/log.48318034._002693.job.log.tg
[2026-01-27 00:33:57] 2026-01-26 23:33:15,012 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 00:33:57] 2026-01-26 23:33:15,012 | INFO     | summary of transferred files:
[2026-01-27 00:33:57] 2026-01-26 23:33:15,012 | INFO     |  -- lfn=log.48318034._002693.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 00:33:57] 2026-01-26 23:33:15,012 | INFO     | stage-out finished correctly
[2026-01-27 00:33:57] 2026-01-26 23:33:15,045 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 00:33:57] 2026-01-26 23:33:15,056 | INFO     | time since job start (4588s) is within the limit (349056.0s)
[2026-01-27 00:33:57] 2026-01-26 23:33:16,670 | INFO     | job 6983773565 has state=finished
[2026-01-27 00:33:57] 2026-01-26 23:33:16,670 | INFO     | preparing for final server update for job 6983773565 in state='finished'
[2026-01-27 00:33:57] 2026-01-26 23:33:16,670 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6983773565/jobReport.json
[2026-01-27 00:33:57] 2026-01-26 23:33:16,671 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/2/workernode_map.json
[2026-01-27 00:33:57] 2026-01-26 23:33:16,672 | INFO     | this job has now completed (state=finished)
[2026-01-27 00:33:57] 2026-01-26 23:33:16,672 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 00:33:57] 2026-01-26 23:33:16,672 | INFO     | log transfer has been attempted: DONE
[2026-01-27 00:33:57] 2026-01-26 23:33:16,672 | INFO     | job 6983773565 has finished - writing final server update
[2026-01-27 00:33:57] 2026-01-26 23:33:16,672 | INFO     | total number of processed events: 400 (read)
[2026-01-27 00:33:57] 2026-01-26 23:33:16,674 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6983773565/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 00:33:57] 2026-01-26 23:33:16,674 | INFO     | extracted standard info from prmon json
[2026-01-27 00:33:57] 2026-01-26 23:33:16,674 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 00:33:57] 2026-01-26 23:33:16,674 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 00:33:57] 2026-01-26 23:33:16,674 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 00:33:57] 2026-01-26 23:33:16,674 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 00:33:57] 2026-01-26 23:33:16,675 | INFO     | fitting pss+swap vs Time
[2026-01-27 00:33:57] 2026-01-26 23:33:16,675 | INFO     | sum of square deviations: 97479037.0
[2026-01-27 00:33:57] 2026-01-26 23:33:16,675 | INFO     | sum of deviations: -1759903222.5000002
[2026-01-27 00:33:57] 2026-01-26 23:33:16,675 | INFO     | mean x: 1769468175.5
[2026-01-27 00:33:57] 2026-01-26 23:33:16,675 | INFO     | mean y: 2364511.9852941176
[2026-01-27 00:33:57] 2026-01-26 23:33:16,675 | INFO     | intersect: 31948645887.063362
[2026-01-27 00:33:57] 2026-01-26 23:33:16,675 | INFO     | chi2: 0.004500410746805929
[2026-01-27 00:33:57] 2026-01-26 23:33:16,676 | INFO     | current memory leak: -18.05 B/s (using 68 data points, chi2=0.00)
[2026-01-27 00:33:57] 2026-01-26 23:33:16,676 | INFO     | could have reported an average CPU frequency of 3700 MHz (6 samples)
[2026-01-27 00:33:57] 2026-01-26 23:33:16,676 | INFO     | ..............................
[2026-01-27 00:33:57] 2026-01-26 23:33:16,676 | INFO     | . Timing measurements:
[2026-01-27 00:33:57] 2026-01-26 23:33:16,676 | INFO     | . get job = 0 s
[2026-01-27 00:33:57] 2026-01-26 23:33:16,676 | INFO     | . initial setup = 5 s
[2026-01-27 00:33:57] 2026-01-26 23:33:16,676 | INFO     | . payload setup = 5 s
[2026-01-27 00:33:57] 2026-01-26 23:33:16,676 | INFO     | . stage-in = 0 s
[2026-01-27 00:33:57] 2026-01-26 23:33:16,676 | INFO     | . payload execution = 4567 s
[2026-01-27 00:33:57] 2026-01-26 23:33:16,676 | INFO     | . stage-out = 0 s
[2026-01-27 00:33:57] 2026-01-26 23:33:16,676 | INFO     | . log creation = 0 s
[2026-01-27 00:33:57] 2026-01-26 23:33:16,676 | INFO     | ..............................
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | 
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | job summary report
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | --------------------------------------------------
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | PanDA job id: 6983773565
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | task id: 48318034
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | errors: (none)
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | pilot state: finished 
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | transexitcode: 0
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | exeerrorcode: 0
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | exeerrordiag: 
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | exitcode: 0
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | exitmsg: OK
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | cpuconsumptiontime: 17370 s
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | nevents: 400
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | neventsw: 0
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | pid: 267357
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | pgrp: 267357
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | corecount: 4
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | event service: False
[2026-01-27 00:33:57] 2026-01-26 23:33:16,708 | INFO     | sizes: {0: 2283956, 1: 2284246, 11: 2284246, 4576: 2310515, 4577: 2319597, 4579: 2319735}
[2026-01-27 00:33:57] 2026-01-26 23:33:16,709 | INFO     | --------------------------------------------------
[2026-01-27 00:33:57] 2026-01-26 23:33:16,709 | INFO     | 
[2026-01-27 00:33:57] 2026-01-26 23:33:16,709 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2026-01-27 00:33:57] 2026-01-26 23:33:16,727 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 00:33:57] 2026-01-26 23:33:16,727 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 00:33:57] 2026-01-26 23:33:16,727 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 00:33:57] 2026-01-26 23:33:16,727 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 00:33:57] 2026-01-26 23:33:16,727 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 00:33:57] 2026-01-26 23:33:16,727 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 00:33:57] 2026-01-26 23:33:16,727 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 00:33:57] 2026-01-26 23:33:16,727 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 00:33:57] 2026-01-26 23:33:16,727 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 00:33:57] 2026-01-26 23:33:16,727 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 00:33:57] 2026-01-26 23:33:16,727 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 00:33:57] 2026-01-26 23:33:16,727 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 00:33:57] 2026-01-26 23:33:16,727 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 00:33:57] 2026-01-26 23:33:16,727 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 00:33:57] 2026-01-26 23:33:16,727 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 00:33:57] 2026-01-26 23:33:16,728 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 00:33:57] 2026-01-26 23:33:16,728 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 00:33:57] 2026-01-26 23:33:16,728 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 00:33:57] 2026-01-26 23:33:16,728 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 00:33:57] 2026-01-26 23:33:16,728 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 00:33:57] 2026-01-26 23:33:16,728 | INFO     | job 6983773565 has completed (purged errors)
[2026-01-27 00:33:57] 2026-01-26 23:33:16,728 | INFO     | overall cleanup function is called
[2026-01-27 00:33:57] 2026-01-26 23:33:17,257 | WARNING  | process 267357 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 00:33:57] 2026-01-26 23:33:17,317 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 00:33:57] 2026-01-26 23:33:17,318 | INFO     | reaping zombies for max 20 seconds
[2026-01-27 00:33:57] 2026-01-26 23:33:17,327 | INFO     | checking for looping job (in state=finished)
[2026-01-27 00:33:57] 2026-01-26 23:33:17,327 | INFO     | using looping job limit: 7200 s
[2026-01-27 00:33:57] 2026-01-26 23:33:17,420 | INFO     | number of running child processes to parent process 267357: 1
[2026-01-27 00:33:57] 2026-01-26 23:33:17,421 | INFO     | maximum number of monitored processes: 6
[2026-01-27 00:33:57] 2026-01-26 23:33:17,421 | INFO     | aborting job monitoring since job object (job id=6983773565) has expired
[2026-01-27 00:33:57] 2026-01-26 23:33:17,735 | INFO     | --- collectZombieJob: --- 10, [267357]
[2026-01-27 00:33:57] 2026-01-26 23:33:17,736 | INFO     | zombie collector waiting for pid 267357
[2026-01-27 00:33:57] 2026-01-26 23:33:17,736 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 00:33:57] 2026-01-26 23:33:17,736 | INFO     | collected zombie processes
[2026-01-27 00:33:57] 2026-01-26 23:33:17,736 | INFO     | will attempt to kill all subprocesses of pid=267357
[2026-01-27 00:33:57] 2026-01-26 23:33:17,829 | INFO     | process IDs to be killed: [267357] (in reverse order)
[2026-01-27 00:33:57] 2026-01-26 23:33:17,872 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 00:33:57] 2026-01-26 23:33:17,873 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 00:33:57] 2026-01-26 23:33:17,875 | INFO     | did not find any defunct processes belonging to 267357
[2026-01-27 00:33:57] 2026-01-26 23:33:17,877 | INFO     | did not find any defunct processes belonging to 267357
[2026-01-27 00:33:57] 2026-01-26 23:33:17,877 | INFO     | ready for new job
[2026-01-27 00:33:57] 2026-01-26 23:33:17,877 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 00:33:57] 2026-01-26 23:33:17,878 | INFO     | **************************************
[2026-01-27 00:33:57] 2026-01-26 23:33:17,878 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 00:33:57] 2026-01-26 23:33:17,878 | INFO     | **************************************
[2026-01-27 00:33:57] 2026-01-26 23:33:17,878 | INFO     | 
[2026-01-27 00:33:57] 2026-01-26 23:33:17,879 | INFO     | pilot is running in a VM
[2026-01-27 00:33:57] 2026-01-26 23:33:17,879 | INFO     | architecture information:
[2026-01-27 00:33:57] 2026-01-26 23:33:17,879 | INFO     | executing command: cat /etc/os-release
[2026-01-27 00:33:57] 2026-01-26 23:33:17,890 | INFO     | cat /etc/os-release:
[2026-01-27 00:33:57] NAME="CentOS Linux"
[2026-01-27 00:33:57] VERSION="7 (Core)"
[2026-01-27 00:33:57] ID="centos"
[2026-01-27 00:33:57] ID_LIKE="rhel fedora"
[2026-01-27 00:33:57] VERSION_ID="7"
[2026-01-27 00:33:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 00:33:57] ANSI_COLOR="0;31"
[2026-01-27 00:33:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 00:33:57] HOME_URL="https://www.centos.org/"
[2026-01-27 00:33:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 00:33:57] 
[2026-01-27 00:33:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 00:33:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 00:33:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 00:33:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 00:33:57] 
[2026-01-27 00:33:57] 2026-01-26 23:33:17,890 | INFO     | **************************************
[2026-01-27 00:33:57] 2026-01-26 23:33:18,393 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2026-01-27 00:33:57] 2026-01-26 23:33:18,404 | INFO     | sufficient remaining disk space (42153803776 B)
[2026-01-27 00:33:57] 2026-01-26 23:33:18,404 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 00:33:57] 2026-01-26 23:33:18,404 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 00:33:57] 2026-01-26 23:33:18,405 | INFO     | update_server=False
[2026-01-27 00:33:57] 2026-01-26 23:33:18,405 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 00:33:57] 2026-01-26 23:33:18,405 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 00:33:57] 2026-01-26 23:33:18,405 | INFO     | will abort loop
[2026-01-27 00:33:57] 2026-01-26 23:33:18,405 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 00:33:57] 2026-01-26 23:33:18,405 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 00:33:57] 2026-01-26 23:33:19,112 | INFO     | all job control threads have been joined
[2026-01-27 00:33:57] 2026-01-26 23:33:19,206 | INFO     | all payload control threads have been joined
[2026-01-27 00:33:57] 2026-01-26 23:33:19,318 | INFO     | all data control threads have been joined
[2026-01-27 00:33:57] 2026-01-26 23:33:19,410 | INFO     | [job] retrieve thread has finished
[2026-01-27 00:33:57] 2026-01-26 23:33:19,410 | INFO     | [job] job monitor thread has finished
[2026-01-27 00:33:57] 2026-01-26 23:33:19,411 | INFO     | [job] queue monitor thread has finished
[2026-01-27 00:33:57] 2026-01-26 23:33:19,608 | INFO     | job.realtimelogging is not enabled
[2026-01-27 00:33:57] 2026-01-26 23:33:19,926 | INFO     | [payload] failed_post thread has finished
[2026-01-27 00:33:57] 2026-01-26 23:33:20,116 | INFO     | [job] control thread has finished
[2026-01-27 00:33:57] 2026-01-26 23:33:20,212 | INFO     | [payload] control thread has finished
[2026-01-27 00:33:57] 2026-01-26 23:33:20,324 | INFO     | [data] control thread has finished
[2026-01-27 00:33:57] 2026-01-26 23:33:20,411 | INFO     | [data] copytool_out thread has finished
[2026-01-27 00:33:57] 2026-01-26 23:33:20,411 | INFO     | [job] validate thread has finished
[2026-01-27 00:33:57] 2026-01-26 23:33:20,421 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 00:33:57] 2026-01-26 23:33:20,534 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 00:33:57] 2026-01-26 23:33:20,614 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 00:33:57] 2026-01-26 23:33:20,619 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 00:33:57] 2026-01-26 23:33:20,762 | INFO     | [data] copytool_in thread has finished
[2026-01-27 00:33:57] 2026-01-26 23:33:20,866 | INFO     | [payload] validate_post thread has finished
[2026-01-27 00:33:57] 2026-01-26 23:33:21,083 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 00:33:57] 2026-01-26 23:33:25,090 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 00:33:57] 2026-01-26 23:33:48,241 | INFO     | PID=262827 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 00:33:57] 2026-01-26 23:33:48,241 | INFO     | .. there are 3 such processes running
[2026-01-27 00:33:57] 2026-01-26 23:33:48,242 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 00:33:57] 2026-01-26 23:33:48,242 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 00:33:57] 2026-01-26 23:33:48,242 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 00:33:57] 2026-01-26 23:33:51,789 | INFO     | [monitor] cgroup control has ended
[2026-01-27 00:33:57] 2026-01-26 23:33:52,022 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126363162818368)>', '<ExcThread(monitor, started 126362056632064)>']
[2026-01-27 00:33:57] 2026-01-26 23:33:52,263 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 00:33:57] 2026-01-26 23:33:52,263 | INFO     | [monitor] control thread has ended
[2026-01-27 00:33:57] 2026-01-26 23:33:57,048 | INFO     | all workflow threads have been joined
[2026-01-27 00:33:57] 2026-01-26 23:33:57,048 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 00:33:57] 2026-01-26 23:33:57,049 | INFO     | traces error code: 0
[2026-01-27 00:33:57] 2026-01-26 23:33:57,049 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 00:33:57] 2026-01-26 23:33:57,107 [wrapper] ==== pilot stdout END ====
[2026-01-27 00:33:57] 2026-01-26 23:33:57,110 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 00:33:57] 2026-01-26 23:33:57,113 [wrapper] pilotpid: 262827
[2026-01-27 00:33:57] 2026-01-26 23:33:57,116 [wrapper] Pilot exit status: 0
[2026-01-27 00:33:57] 2026-01-26 23:33:57,129 [wrapper] pandaids: 6983773565
[2026-01-27 00:33:57] 2026-01-26 23:33:57,162 [wrapper] cleanup supervisor_pilot  301517 262828
[2026-01-27 00:33:57] 2026-01-26 23:33:57,166 [wrapper] Test setup, not cleaning
[2026-01-27 00:33:57] 2026-01-26 23:33:57,169 [wrapper] apfmon messages muted
[2026-01-27 00:33:57] 2026-01-26 23:33:57,172 [wrapper] ==== wrapper stdout END ====
[2026-01-27 00:33:57] 2026-01-26 23:33:57,176 [wrapper] ==== wrapper stderr END ====
[2026-01-27 00:33:57]  *** Error codes and diagnostics ***
[2026-01-27 00:33:57]     "exeErrorCode": 0,
[2026-01-27 00:33:57]     "exeErrorDiag": "",
[2026-01-27 00:33:57]     "pilotErrorCode": 0,
[2026-01-27 00:33:57]     "pilotErrorDiag": "",
[2026-01-27 00:33:57]  *** Listing of results directory ***
[2026-01-27 00:33:57] insgesamt 660272
[2026-01-27 00:33:57] -rw-r--r-- 1 yeti boinc    584422 Jan 26 06:14 pilot3.tar.gz
[2026-01-27 00:33:57] -rwx------ 1 yeti boinc     36322 Jan 26 06:17 runpilot2-wrapper.sh
[2026-01-27 00:33:57] -rw-r--r-- 1 yeti boinc      5111 Jan 26 06:22 queuedata.json
[2026-01-27 00:33:57] -rw-r--r-- 1 yeti boinc       100 Jan 26 23:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 00:33:57] -rwxr-xr-x 1 yeti boinc      7986 Jan 26 23:16 run_atlas
[2026-01-27 00:33:57] -rw-r--r-- 1 yeti boinc       105 Jan 26 23:16 job.xml
[2026-01-27 00:33:57] -rw-r--r-- 2 yeti boinc 491357521 Jan 26 23:16 EVNT.48318032._000067.pool.root.1
[2026-01-27 00:33:57] -rw-r--r-- 2 yeti boinc     15845 Jan 26 23:16 start_atlas.sh
[2026-01-27 00:33:57] drwxrwx--x 2 yeti boinc      4096 Jan 26 23:16 shared
[2026-01-27 00:33:57] -rw-r--r-- 2 yeti boinc    597770 Jan 26 23:16 input.tar.gz
[2026-01-27 00:33:57] -rw-r--r-- 1 yeti boinc      6560 Jan 26 23:16 init_data.xml
[2026-01-27 00:33:57] -rw-r--r-- 1 yeti boinc         0 Jan 26 23:16 boinc_setup_complete
[2026-01-27 00:33:57] -rw-r--r-- 1 yeti boinc         0 Jan 26 23:16 boinc_lockfile
[2026-01-27 00:33:57] -rw-r--r-- 1 yeti boinc      2535 Jan 26 23:16 pandaJob.out
[2026-01-27 00:33:57] -rw------- 1 yeti boinc        52 Jan 26 23:16 setup.sh.local
[2026-01-27 00:33:57] -rw------- 1 yeti boinc   1006433 Jan 26 23:16 agis_schedconf.cvmfs.json
[2026-01-27 00:33:57] -rw------- 1 yeti boinc   1516246 Jan 26 23:16 agis_ddmendpoints.agis.ALL.json
[2026-01-27 00:33:57] -rw------- 1 yeti boinc       423 Jan 26 23:16 workernode_map.json
[2026-01-27 00:33:57] drwx------ 5 yeti boinc      4096 Jan 26 23:16 pilot3
[2026-01-27 00:33:57] -rw-r--r-- 1 yeti boinc       531 Jan 27 00:32 boinc_task_state.xml
[2026-01-27 00:33:57] -rw------- 1 yeti boinc 178819702 Jan 27 00:32 HITS.48318034._002693.pool.root.1
[2026-01-27 00:33:57] -rw------- 1 yeti boinc      1022 Jan 27 00:33 memory_monitor_summary.json
[2026-01-27 00:33:57] -rw------- 1 yeti boinc    299043 Jan 27 00:33 log.48318034._002693.job.log.tgz.1
[2026-01-27 00:33:57] -rw------- 1 yeti boinc      6285 Jan 27 00:33 heartbeat.json
[2026-01-27 00:33:57] -rw------- 1 yeti boinc        95 Jan 27 00:33 pilot_heartbeat.json
[2026-01-27 00:33:57] -rw-r--r-- 1 yeti boinc      8192 Jan 27 00:33 boinc_mmap_file
[2026-01-27 00:33:57] -rw-r--r-- 1 yeti boinc        27 Jan 27 00:33 wrapper_checkpoint.txt
[2026-01-27 00:33:57] -rw------- 1 yeti boinc      4968 Jan 27 00:33 pilotlog.txt
[2026-01-27 00:33:57] -rw------- 1 yeti boinc    693207 Jan 27 00:33 log.48318034._002693.job.log.1
[2026-01-27 00:33:57] -rw------- 1 yeti boinc       357 Jan 27 00:33 output.list
[2026-01-27 00:33:57] -rw-r--r-- 1 yeti boinc       620 Jan 27 00:33 runtime_log
[2026-01-27 00:33:57] -rw------- 1 yeti boinc   1013760 Jan 27 00:33 result.tar.gz
[2026-01-27 00:33:57] -rw-r--r-- 1 yeti boinc      9551 Jan 27 00:33 runtime_log.err
[2026-01-27 00:33:57] -rw------- 1 yeti boinc       639 Jan 27 00:33 kvANDmFAU48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPg2KDmnT4RLm.diag
[2026-01-27 00:33:57] -rw-r--r-- 1 yeti boinc     21350 Jan 27 00:33 stderr.txt
[2026-01-27 00:33:57] HITS file was successfully produced:
[2026-01-27 00:33:57] -rw------- 1 yeti boinc 178819702 Jan 27 00:32 shared/HITS.pool.root.1
[2026-01-27 00:33:57]  *** Contents of shared directory: ***
[2026-01-27 00:33:57] insgesamt 656076
[2026-01-27 00:33:57] -rw-r--r-- 2 yeti boinc 491357521 Jan 26 23:16 ATLAS.root_0
[2026-01-27 00:33:57] -rw-r--r-- 2 yeti boinc     15845 Jan 26 23:16 start_atlas.sh
[2026-01-27 00:33:57] -rw-r--r-- 2 yeti boinc    597770 Jan 26 23:16 input.tar.gz
[2026-01-27 00:33:57] -rw------- 1 yeti boinc 178819702 Jan 27 00:32 HITS.pool.root.1
[2026-01-27 00:33:57] -rw------- 1 yeti boinc   1013760 Jan 27 00:33 result.tar.gz
00:33:58 (258822): run_atlas exited; CPU time 17417.443082
00:33:58 (258822): called boinc_finish(0)

</stderr_txt>
]]>

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