Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:40:28 (3007975): wrapper (7.7.26015): starting
16:40:28 (3007975): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 16:40:28] Arguments: --nthreads 8
[2026-01-26 16:40:28] Threads: 8
[2026-01-26 16:40:28] Checking for CVMFS
[2026-01-26 16:40:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 16:40:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 16:40:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 16:40:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 16:40:28] 2.13.3.0 11754 118397 257868 155562 1 698 25205492 32935936 28376 16776704 0 663216549 99.548 808692617 20058 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 16:40:28] CVMFS is ok
[2026-01-26 16:40:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 16:40:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 16:40:28] Further information can be found at the LHC@home message board.
[2026-01-26 16:40:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 16:40:28] Checking for apptainer binary...
[2026-01-26 16:40:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 16:40:28] Running /usr/bin/apptainer --version
[2026-01-26 16:40:28] apptainer version 1.4.5-2.el9
[2026-01-26 16:40:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 16:40:29] c7-2-38.aglt2.org
[2026-01-26 16:40:29] apptainer works
[2026-01-26 16:40:29] Set ATHENA_PROC_NUMBER=8
[2026-01-26 16:40:29] Set ATHENA_CORE_NUMBER=8
[2026-01-26 16:40:29] Starting ATLAS job with PandaID=6984043357
[2026-01-26 16:40:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 19:39:24]  *** The last 200 lines of the pilot log: ***
[2026-01-26 19:39:24] 2026-01-27 00:38:35,137 | INFO     | total number of processed events: 400 (read)
[2026-01-26 19:39:24] 2026-01-27 00:38:35,159 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6984043357/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 19:39:24] 2026-01-27 00:38:35,159 | INFO     | extracted standard info from prmon json
[2026-01-26 19:39:24] 2026-01-27 00:38:35,160 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 19:39:24] 2026-01-27 00:38:35,160 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 19:39:24] 2026-01-27 00:38:35,160 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 19:39:24] 2026-01-27 00:38:35,160 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 19:39:24] 2026-01-27 00:38:35,162 | INFO     | fitting pss+swap vs Time
[2026-01-26 19:39:24] 2026-01-27 00:38:35,163 | INFO     | sum of square deviations: 1661985435.4285681
[2026-01-26 19:39:24] 2026-01-27 00:38:35,163 | INFO     | sum of deviations: -13406538978.571419
[2026-01-26 19:39:24] 2026-01-27 00:38:35,164 | INFO     | mean x: 1769468987.2571428
[2026-01-26 19:39:24] 2026-01-27 00:38:35,164 | INFO     | mean y: 2510142.4571428574
[2026-01-26 19:39:24] 2026-01-27 00:38:35,164 | INFO     | intersect: 14276073823.187584
[2026-01-26 19:39:24] 2026-01-27 00:38:35,164 | INFO     | chi2: 2.085427692036867
[2026-01-26 19:39:24] 2026-01-27 00:38:35,164 | INFO     | sum of square deviations: 1523576587.1117628
[2026-01-26 19:39:24] 2026-01-27 00:38:35,165 | INFO     | sum of deviations: -1214204888.9411778
[2026-01-26 19:39:24] 2026-01-27 00:38:35,165 | INFO     | mean x: 1769468834.7588236
[2026-01-26 19:39:24] 2026-01-27 00:38:35,165 | INFO     | mean y: 2523275.294117647
[2026-01-26 19:39:24] 2026-01-27 00:38:35,165 | INFO     | intersect: 1412690462.272299
[2026-01-26 19:39:24] 2026-01-27 00:38:35,166 | INFO     | chi2: 1.2856804348727409
[2026-01-26 19:39:24] 2026-01-27 00:38:35,166 | INFO     | current chi2=1.2856804348727409 (change=38.349316076406446 %)
[2026-01-26 19:39:24] 2026-01-27 00:38:35,166 | INFO     | sum of square deviations: 1393074741.7939432
[2026-01-26 19:39:24] 2026-01-27 00:38:35,167 | INFO     | sum of deviations: -1051063021.9272704
[2026-01-26 19:39:24] 2026-01-27 00:38:35,167 | INFO     | mean x: 1769468682.260606
[2026-01-26 19:39:24] 2026-01-27 00:38:35,167 | INFO     | mean y: 2523466.672727273
[2026-01-26 19:39:24] 2026-01-27 00:38:35,167 | INFO     | intersect: 1337572509.330335
[2026-01-26 19:39:24] 2026-01-27 00:38:35,167 | INFO     | chi2: 1.2858126384003794
[2026-01-26 19:39:24] 2026-01-27 00:38:35,167 | INFO     | current chi2=1.2858126384003794 (change=-0.01028276732325223 %)
[2026-01-26 19:39:24] 2026-01-27 00:38:35,167 | INFO     | right removable region: 164
[2026-01-26 19:39:24] 2026-01-27 00:38:35,167 | INFO     | sum of square deviations: 1523559812.5882351
[2026-01-26 19:39:24] 2026-01-27 00:38:35,168 | INFO     | sum of deviations: -34117059732.70587
[2026-01-26 19:39:24] 2026-01-27 00:38:35,168 | INFO     | mean x: 1769469139.764706
[2026-01-26 19:39:24] 2026-01-27 00:38:35,168 | INFO     | mean y: 2532569.682352941
[2026-01-26 19:39:24] 2026-01-27 00:38:35,168 | INFO     | intersect: 39626237420.47956
[2026-01-26 19:39:24] 2026-01-27 00:38:35,169 | INFO     | chi2: 0.8968004278689486
[2026-01-26 19:39:24] 2026-01-27 00:38:35,169 | INFO     | current chi2=0.8968004278689486 (change=56.99681023257964 %)
[2026-01-26 19:39:24] 2026-01-27 00:38:35,169 | INFO     | sum of square deviations: 1393041314.7272735
[2026-01-26 19:39:24] 2026-01-27 00:38:35,170 | INFO     | sum of deviations: -30709803504.999996
[2026-01-26 19:39:24] 2026-01-27 00:38:35,170 | INFO     | mean x: 1769469292.2727273
[2026-01-26 19:39:24] 2026-01-27 00:38:35,170 | INFO     | mean y: 2528581.0
[2026-01-26 19:39:24] 2026-01-27 00:38:35,170 | INFO     | intersect: 39010742981.63709
[2026-01-26 19:39:24] 2026-01-27 00:38:35,170 | INFO     | chi2: 0.8956262193917965
[2026-01-26 19:39:24] 2026-01-27 00:38:35,170 | INFO     | current chi2=0.8956262193917965 (change=0.13093308618756538 %)
[2026-01-26 19:39:24] 2026-01-27 00:38:35,170 | INFO     | left removable region: 20
[2026-01-26 19:39:24] 2026-01-27 00:38:35,171 | INFO     | sum of square deviations: 926011403.7500001
[2026-01-26 19:39:24] 2026-01-27 00:38:35,171 | INFO     | sum of deviations: -10547112412.75
[2026-01-26 19:39:24] 2026-01-27 00:38:35,171 | INFO     | mean x: 1769469261.7916667
[2026-01-26 19:39:24] 2026-01-27 00:38:35,171 | INFO     | mean y: 2533188.7083333335
[2026-01-26 19:39:24] 2026-01-27 00:38:35,172 | INFO     | intersect: 20156487167.50939
[2026-01-26 19:39:24] 2026-01-27 00:38:35,172 | INFO     | chi2: 0.054699526091230896
[2026-01-26 19:39:24] 2026-01-27 00:38:35,172 | INFO     | current memory leak: -11.39 B/s (using 144 data points, chi2=0.05)
[2026-01-26 19:39:24] 2026-01-27 00:38:35,172 | INFO     | could have reported an average CPU frequency of 3345 MHz (9 samples)
[2026-01-26 19:39:24] 2026-01-27 00:38:35,172 | INFO     | ..............................
[2026-01-26 19:39:24] 2026-01-27 00:38:35,172 | INFO     | . Timing measurements:
[2026-01-26 19:39:24] 2026-01-27 00:38:35,173 | INFO     | . get job = 0 s
[2026-01-26 19:39:24] 2026-01-27 00:38:35,173 | INFO     | . initial setup = 11 s
[2026-01-26 19:39:24] 2026-01-27 00:38:35,173 | INFO     | . payload setup = 11 s
[2026-01-26 19:39:24] 2026-01-27 00:38:35,173 | INFO     | . stage-in = 0 s
[2026-01-26 19:39:24] 2026-01-27 00:38:35,173 | INFO     | . payload execution = 10631 s
[2026-01-26 19:39:24] 2026-01-27 00:38:35,173 | INFO     | . stage-out = 0 s
[2026-01-26 19:39:24] 2026-01-27 00:38:35,173 | INFO     | . log creation = 0 s
[2026-01-26 19:39:24] 2026-01-27 00:38:35,173 | INFO     | ..............................
[2026-01-26 19:39:24] 2026-01-27 00:38:35,245 | INFO     | 
[2026-01-26 19:39:24] 2026-01-27 00:38:35,245 | INFO     | job summary report
[2026-01-26 19:39:24] 2026-01-27 00:38:35,246 | INFO     | --------------------------------------------------
[2026-01-26 19:39:24] 2026-01-27 00:38:35,246 | INFO     | PanDA job id: 6984043357
[2026-01-26 19:39:24] 2026-01-27 00:38:35,246 | INFO     | task id: 48317911
[2026-01-26 19:39:24] 2026-01-27 00:38:35,246 | INFO     | errors: (none)
[2026-01-26 19:39:24] 2026-01-27 00:38:35,246 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 19:39:24] 2026-01-27 00:38:35,246 | INFO     | pilot state: finished 
[2026-01-26 19:39:24] 2026-01-27 00:38:35,246 | INFO     | transexitcode: 0
[2026-01-26 19:39:24] 2026-01-27 00:38:35,246 | INFO     | exeerrorcode: 0
[2026-01-26 19:39:24] 2026-01-27 00:38:35,246 | INFO     | exeerrordiag: 
[2026-01-26 19:39:24] 2026-01-27 00:38:35,246 | INFO     | exitcode: 0
[2026-01-26 19:39:24] 2026-01-27 00:38:35,246 | INFO     | exitmsg: OK
[2026-01-26 19:39:24] 2026-01-27 00:38:35,246 | INFO     | cpuconsumptiontime: 35167 s
[2026-01-26 19:39:24] 2026-01-27 00:38:35,246 | INFO     | nevents: 400
[2026-01-26 19:39:24] 2026-01-27 00:38:35,246 | INFO     | neventsw: 0
[2026-01-26 19:39:24] 2026-01-27 00:38:35,246 | INFO     | pid: 3016978
[2026-01-26 19:39:24] 2026-01-27 00:38:35,247 | INFO     | pgrp: 3016978
[2026-01-26 19:39:24] 2026-01-27 00:38:35,247 | INFO     | corecount: 8
[2026-01-26 19:39:24] 2026-01-27 00:38:35,247 | INFO     | event service: False
[2026-01-26 19:39:24] 2026-01-27 00:38:35,247 | INFO     | sizes: {0: 2284207, 1: 2284207, 10647: 2313182, 10648: 2322180, 10651: 2322236, 10654: 2322494}
[2026-01-26 19:39:24] 2026-01-27 00:38:35,247 | INFO     | --------------------------------------------------
[2026-01-26 19:39:24] 2026-01-27 00:38:35,247 | INFO     | 
[2026-01-26 19:39:24] 2026-01-27 00:38:35,247 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-26 19:39:24] 2026-01-27 00:38:35,302 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 19:39:24] 2026-01-27 00:38:35,303 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 19:39:24] 2026-01-27 00:38:35,303 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 19:39:24] 2026-01-27 00:38:35,303 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 19:39:24] 2026-01-27 00:38:35,303 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 19:39:24] 2026-01-27 00:38:35,303 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 19:39:24] 2026-01-27 00:38:35,303 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 19:39:24] 2026-01-27 00:38:35,303 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 19:39:24] 2026-01-27 00:38:35,303 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 19:39:24] 2026-01-27 00:38:35,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 19:39:24] 2026-01-27 00:38:35,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 19:39:24] 2026-01-27 00:38:35,303 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 19:39:24] 2026-01-27 00:38:35,304 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 19:39:24] 2026-01-27 00:38:35,304 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 19:39:24] 2026-01-27 00:38:35,304 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 19:39:24] 2026-01-27 00:38:35,304 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 19:39:24] 2026-01-27 00:38:35,304 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 19:39:24] 2026-01-27 00:38:35,304 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 19:39:24] 2026-01-27 00:38:35,304 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 19:39:24] 2026-01-27 00:38:35,304 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 19:39:24] 2026-01-27 00:38:35,304 | INFO     | job 6984043357 has completed (purged errors)
[2026-01-26 19:39:24] 2026-01-27 00:38:35,304 | INFO     | overall cleanup function is called
[2026-01-26 19:39:24] 2026-01-27 00:38:36,313 | INFO     | --- collectZombieJob: --- 10, [3016978]
[2026-01-26 19:39:24] 2026-01-27 00:38:36,313 | INFO     | zombie collector waiting for pid 3016978
[2026-01-26 19:39:24] 2026-01-27 00:38:36,313 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 19:39:24] 2026-01-27 00:38:36,313 | INFO     | collected zombie processes
[2026-01-26 19:39:24] 2026-01-27 00:38:36,314 | INFO     | will attempt to kill all subprocesses of pid=3016978
[2026-01-26 19:39:24] 2026-01-27 00:38:36,832 | INFO     | process IDs to be killed: [3016978] (in reverse order)
[2026-01-26 19:39:24] 2026-01-27 00:38:36,965 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 19:39:24] 2026-01-27 00:38:36,965 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 19:39:24] 2026-01-27 00:38:36,983 | INFO     | did not find any defunct processes belonging to 3016978
[2026-01-26 19:39:24] 2026-01-27 00:38:37,003 | INFO     | did not find any defunct processes belonging to 3016978
[2026-01-26 19:39:24] 2026-01-27 00:38:37,004 | INFO     | ready for new job
[2026-01-26 19:39:24] 2026-01-27 00:38:37,004 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 19:39:24] 2026-01-27 00:38:37,005 | INFO     | **************************************
[2026-01-26 19:39:24] 2026-01-27 00:38:37,006 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 19:39:24] 2026-01-27 00:38:37,006 | INFO     | **************************************
[2026-01-26 19:39:24] 2026-01-27 00:38:37,006 | INFO     | 
[2026-01-26 19:39:24] 2026-01-27 00:38:37,011 | INFO     | architecture information:
[2026-01-26 19:39:24] 2026-01-27 00:38:37,011 | INFO     | executing command: cat /etc/os-release
[2026-01-26 19:39:24] 2026-01-27 00:38:37,060 | INFO     | cat /etc/os-release:
[2026-01-26 19:39:24] NAME="CentOS Linux"
[2026-01-26 19:39:24] VERSION="7 (Core)"
[2026-01-26 19:39:24] ID="centos"
[2026-01-26 19:39:24] ID_LIKE="rhel fedora"
[2026-01-26 19:39:24] VERSION_ID="7"
[2026-01-26 19:39:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 19:39:24] ANSI_COLOR="0;31"
[2026-01-26 19:39:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 19:39:24] HOME_URL="https://www.centos.org/"
[2026-01-26 19:39:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 19:39:24] 
[2026-01-26 19:39:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 19:39:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 19:39:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 19:39:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 19:39:24] 
[2026-01-26 19:39:24] 2026-01-27 00:38:37,061 | INFO     | **************************************
[2026-01-26 19:39:24] 2026-01-27 00:38:37,564 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-26 19:39:24] 2026-01-27 00:38:37,588 | INFO     | sufficient remaining disk space (71164755968 B)
[2026-01-26 19:39:24] 2026-01-27 00:38:37,589 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 19:39:24] 2026-01-27 00:38:37,589 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 19:39:24] 2026-01-27 00:38:37,589 | INFO     | update_server=False
[2026-01-26 19:39:24] 2026-01-27 00:38:37,589 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 19:39:24] 2026-01-27 00:38:37,589 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 19:39:24] 2026-01-27 00:38:37,706 | INFO     | all payload control threads have been joined
[2026-01-26 19:39:24] 2026-01-27 00:38:37,857 | INFO     | all job control threads have been joined
[2026-01-26 19:39:24] 2026-01-27 00:38:38,029 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 19:39:24] 2026-01-27 00:38:38,029 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 19:39:24] 2026-01-27 00:38:38,029 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 19:39:24] 2026-01-27 00:38:38,030 | INFO     | will abort loop
[2026-01-26 19:39:24] 2026-01-27 00:38:38,342 | INFO     | all data control threads have been joined
[2026-01-26 19:39:24] 2026-01-27 00:38:38,547 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 19:39:24] 2026-01-27 00:38:38,595 | INFO     | [job] retrieve thread has finished
[2026-01-26 19:39:24] 2026-01-27 00:38:38,719 | INFO     | [payload] control thread has finished
[2026-01-26 19:39:24] 2026-01-27 00:38:38,864 | INFO     | [job] control thread has finished
[2026-01-26 19:39:24] 2026-01-27 00:38:39,035 | INFO     | [job] job monitor thread has finished
[2026-01-26 19:39:24] 2026-01-27 00:38:39,113 | INFO     | [payload] validate_post thread has finished
[2026-01-26 19:39:24] 2026-01-27 00:38:39,191 | INFO     | [job] validate thread has finished
[2026-01-26 19:39:24] 2026-01-27 00:38:39,348 | INFO     | [data] control thread has finished
[2026-01-26 19:39:24] 2026-01-27 00:38:39,616 | INFO     | [data] copytool_out thread has finished
[2026-01-26 19:39:24] 2026-01-27 00:38:39,930 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 19:39:24] 2026-01-27 00:38:39,997 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 19:39:24] 2026-01-27 00:38:40,027 | INFO     | [data] copytool_in thread has finished
[2026-01-26 19:39:24] 2026-01-27 00:38:40,053 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 19:39:24] 2026-01-27 00:38:40,132 | INFO     | [payload] failed_post thread has finished
[2026-01-26 19:39:24] 2026-01-27 00:38:40,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 19:39:24] 2026-01-27 00:38:41,265 | INFO     | [job] queue monitor thread has finished
[2026-01-26 19:39:24] 2026-01-27 00:38:42,555 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 19:39:24] 2026-01-27 00:38:47,645 | INFO     | job.realtimelogging is not enabled
[2026-01-26 19:39:24] 2026-01-27 00:38:48,651 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 19:39:24] 2026-01-27 00:39:08,590 | INFO     | PID=3011823 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 19:39:24] 2026-01-27 00:39:08,591 | INFO     | .. there are 31 such processes running
[2026-01-26 19:39:24] 2026-01-27 00:39:08,591 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 19:39:24] 2026-01-27 00:39:08,591 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 19:39:24] 2026-01-27 00:39:08,591 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 19:39:24] 2026-01-27 00:39:17,180 | INFO     | [monitor] cgroup control has ended
[2026-01-26 19:39:24] 2026-01-27 00:39:18,753 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140010905315136)>', '<ExcThread(monitor, started 140010397349632)>']
[2026-01-26 19:39:24] 2026-01-27 00:39:19,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 19:39:24] 2026-01-27 00:39:19,661 | INFO     | [monitor] control thread has ended
[2026-01-26 19:39:24] 2026-01-27 00:39:23,778 | INFO     | all workflow threads have been joined
[2026-01-26 19:39:24] 2026-01-27 00:39:23,779 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 19:39:24] 2026-01-27 00:39:23,779 | INFO     | traces error code: 0
[2026-01-26 19:39:24] 2026-01-27 00:39:23,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 19:39:24] 2026-01-27 00:39:23,895 [wrapper] ==== pilot stdout END ====
[2026-01-26 19:39:24] 2026-01-27 00:39:23,897 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 19:39:24] 2026-01-27 00:39:23,900 [wrapper] pilotpid: 3011823
[2026-01-26 19:39:24] 2026-01-27 00:39:23,902 [wrapper] Pilot exit status: 0
[2026-01-26 19:39:24] 2026-01-27 00:39:23,932 [wrapper] pandaids: 6984043357
[2026-01-26 19:39:24] 2026-01-27 00:39:24,106 [wrapper] cleanup supervisor_pilot 3701952 3011824
[2026-01-26 19:39:24] 2026-01-27 00:39:24,117 [wrapper] Test setup, not cleaning
[2026-01-26 19:39:24] 2026-01-27 00:39:24,119 [wrapper] apfmon messages muted
[2026-01-26 19:39:24] 2026-01-27 00:39:24,121 [wrapper] ==== wrapper stdout END ====
[2026-01-26 19:39:24] 2026-01-27 00:39:24,123 [wrapper] ==== wrapper stderr END ====
[2026-01-26 19:39:24]  *** Error codes and diagnostics ***
[2026-01-26 19:39:24]     "exeErrorCode": 0,
[2026-01-26 19:39:24]     "exeErrorDiag": "",
[2026-01-26 19:39:24]     "pilotErrorCode": 0,
[2026-01-26 19:39:24]     "pilotErrorDiag": "",
[2026-01-26 19:39:24]  *** Listing of results directory ***
[2026-01-26 19:39:24] total 743488
[2026-01-26 19:39:24] -rw-r--r--. 1 boincer umatlas    584422 Jan 26 00:14 pilot3.tar.gz
[2026-01-26 19:39:24] -rwx------. 1 boincer umatlas     36322 Jan 26 00:17 runpilot2-wrapper.sh
[2026-01-26 19:39:24] -rw-r--r--. 1 boincer umatlas      5111 Jan 26 00:21 queuedata.json
[2026-01-26 19:39:24] -rw-r--r--. 1 boincer umatlas       100 Jan 26 16:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 19:39:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 16:40 run_atlas
[2026-01-26 19:39:24] -rw-r--r--. 1 boincer umatlas       105 Jan 26 16:40 job.xml
[2026-01-26 19:39:24] -rw-r--r--. 2 boincer umatlas 544183965 Jan 26 16:40 EVNT.48317909._000023.pool.root.1
[2026-01-26 19:39:24] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 16:40 start_atlas.sh
[2026-01-26 19:39:24] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 16:40 shared
[2026-01-26 19:39:24] -rw-r--r--. 2 boincer umatlas    597758 Jan 26 16:40 input.tar.gz
[2026-01-26 19:39:24] -rw-r--r--. 1 boincer umatlas         0 Jan 26 16:40 boinc_lockfile
[2026-01-26 19:39:24] -rw-r--r--. 1 boincer umatlas      2499 Jan 26 16:40 pandaJob.out
[2026-01-26 19:39:24] -rw-------. 1 boincer umatlas        57 Jan 26 16:40 setup.sh.local
[2026-01-26 19:39:24] -rw-------. 1 boincer umatlas   1006433 Jan 26 16:40 agis_schedconf.cvmfs.json
[2026-01-26 19:39:24] -rw-------. 1 boincer umatlas   1516246 Jan 26 16:40 agis_ddmendpoints.agis.ALL.json
[2026-01-26 19:39:24] -rw-------. 1 boincer umatlas       429 Jan 26 16:40 workernode_map.json
[2026-01-26 19:39:24] drwx------. 5 boincer umatlas      4096 Jan 26 16:40 pilot3
[2026-01-26 19:39:24] -rw-------. 1 boincer umatlas 209469088 Jan 26 19:37 HITS.48317911._000706.pool.root.1
[2026-01-26 19:39:24] -rw-r--r--. 1 boincer umatlas       530 Jan 26 19:37 boinc_task_state.xml
[2026-01-26 19:39:24] -rw-------. 1 boincer umatlas        95 Jan 26 19:38 pilot_heartbeat.json
[2026-01-26 19:39:24] -rw-------. 1 boincer umatlas      1034 Jan 26 19:38 memory_monitor_summary.json
[2026-01-26 19:39:24] -rw-------. 1 boincer umatlas    437164 Jan 26 19:38 log.48317911._000706.job.log.tgz.1
[2026-01-26 19:39:24] -rw-------. 1 boincer umatlas      6326 Jan 26 19:38 heartbeat.json
[2026-01-26 19:39:24] -rw-r--r--. 1 boincer umatlas      6942 Jan 26 19:39 init_data.xml
[2026-01-26 19:39:24] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 19:39 boinc_mmap_file
[2026-01-26 19:39:24] -rw-r--r--. 1 boincer umatlas        27 Jan 26 19:39 wrapper_checkpoint.txt
[2026-01-26 19:39:24] -rw-------. 1 boincer umatlas      5078 Jan 26 19:39 pilotlog.txt
[2026-01-26 19:39:24] -rw-------. 1 boincer umatlas   1430905 Jan 26 19:39 log.48317911._000706.job.log.1
[2026-01-26 19:39:24] -rw-------. 1 boincer umatlas       357 Jan 26 19:39 output.list
[2026-01-26 19:39:24] -rw-r--r--. 1 boincer umatlas       620 Jan 26 19:39 runtime_log
[2026-01-26 19:39:24] -rw-------. 1 boincer umatlas   1884160 Jan 26 19:39 result.tar.gz
[2026-01-26 19:39:24] -rw-r--r--. 1 boincer umatlas      9337 Jan 26 19:39 runtime_log.err
[2026-01-26 19:39:24] -rw-------. 1 boincer umatlas       653 Jan 26 19:39 Lk0LDm59T48n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3f2KDmECBCYo.diag
[2026-01-26 19:39:24] -rw-r--r--. 1 boincer umatlas     21109 Jan 26 19:39 stderr.txt
[2026-01-26 19:39:24] HITS file was successfully produced:
[2026-01-26 19:39:24] -rw-------. 1 boincer umatlas 209469088 Jan 26 19:37 shared/HITS.pool.root.1
[2026-01-26 19:39:24]  *** Contents of shared directory: ***
[2026-01-26 19:39:24] total 738440
[2026-01-26 19:39:24] -rw-r--r--. 2 boincer umatlas 544183965 Jan 26 16:40 ATLAS.root_0
[2026-01-26 19:39:24] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 16:40 start_atlas.sh
[2026-01-26 19:39:24] -rw-r--r--. 2 boincer umatlas    597758 Jan 26 16:40 input.tar.gz
[2026-01-26 19:39:24] -rw-------. 1 boincer umatlas 209469088 Jan 26 19:37 HITS.pool.root.1
[2026-01-26 19:39:24] -rw-------. 1 boincer umatlas   1884160 Jan 26 19:39 result.tar.gz
19:39:45 (3007975): run_atlas exited; CPU time 35560.803944
19:39:45 (3007975): called boinc_finish(0)

</stderr_txt>
]]>

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