Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:09:45 (3968681): wrapper (7.7.26015): starting
16:09:45 (3968681): wrapper: running run_atlas (--nthreads 9)
[2026-01-26 16:09:45] Arguments: --nthreads 9
[2026-01-26 16:09:45] Threads: 9
[2026-01-26 16:09:45] Checking for CVMFS
[2026-01-26 16:09:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 16:09:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 16:09:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 16:09:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 16:09:46] 2.13.3.0 2295398 41882 110016 155561 2 188 19514710 37030912 1008 16776704 0 28558234 99.970 1828308 34801 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 16:09:46] CVMFS is ok
[2026-01-26 16:09:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 16:09:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 16:09:46] Further information can be found at the LHC@home message board.
[2026-01-26 16:09:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 16:09:46] Checking for apptainer binary...
[2026-01-26 16:09:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 16:09:46] Running /usr/bin/apptainer --version
[2026-01-26 16:09:46] apptainer version 1.4.5-2.el9
[2026-01-26 16:09:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 16:09:46] c-205-36.aglt2.org
[2026-01-26 16:09:46] apptainer works
[2026-01-26 16:09:46] Set ATHENA_PROC_NUMBER=9
[2026-01-26 16:09:46] Set ATHENA_CORE_NUMBER=9
[2026-01-26 16:09:46] Starting ATLAS job with PandaID=6984043756
[2026-01-26 16:09:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 17:36:09]  *** The last 200 lines of the pilot log: ***
[2026-01-26 17:36:09]  is_tar=False
[2026-01-26 17:36:09]  lfn=log.48317872._002424.job.log.tgz.1
[2026-01-26 17:36:09]  mtime=0
[2026-01-26 17:36:09]  protocol_id=None
[2026-01-26 17:36:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 17:36:09]  replicas=None
[2026-01-26 17:36:09]  scope=mc23_13p6TeV
[2026-01-26 17:36:09]  status=None
[2026-01-26 17:36:09]  status_code=0
[2026-01-26 17:36:09]  storage_token=
[2026-01-26 17:36:09]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6984043756/log.48317872._002424.job.log.tgz.1
[2026-01-26 17:36:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/21/62/log.48317872._002424.job.log.tgz.1
[2026-01-26 17:36:09]  workdir=None
[2026-01-26 17:36:09] ]
[2026-01-26 17:36:09] 2026-01-26 22:34:57,804 | INFO     | transferring file log.48317872._002424.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6984043756/log.48317872._002424.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 17:36:09] 2026-01-26 22:34:57,804 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6984043756/log.48317872._002424.job.log.tgz.1 /tmp/boinchome/slots/1/log.48317872._002424.job
[2026-01-26 17:36:09] 2026-01-26 22:34:57,815 | INFO     | adding to output.list: log.48317872._002424.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/21/62/log.48317872._002424.job.log.tg
[2026-01-26 17:36:09] 2026-01-26 22:34:57,815 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 17:36:09] 2026-01-26 22:34:57,815 | INFO     | summary of transferred files:
[2026-01-26 17:36:09] 2026-01-26 22:34:57,815 | INFO     |  -- lfn=log.48317872._002424.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 17:36:09] 2026-01-26 22:34:57,815 | INFO     | stage-out finished correctly
[2026-01-26 17:36:09] 2026-01-26 22:34:57,894 | INFO     | time since job start (5102s) is within the limit (349056.0s)
[2026-01-26 17:36:09] 2026-01-26 22:34:59,025 | WARNING  | process 3976883 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 17:36:09] 2026-01-26 22:34:59,026 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6984043756/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 17:36:09] 2026-01-26 22:34:59,133 | INFO     | number of running child processes to parent process 3976883: 1
[2026-01-26 17:36:09] 2026-01-26 22:34:59,133 | INFO     | maximum number of monitored processes: 6
[2026-01-26 17:36:09] 2026-01-26 22:34:59,860 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 17:36:09] 2026-01-26 22:34:59,901 | INFO     | time since job start (5104s) is within the limit (349056.0s)
[2026-01-26 17:36:09] 2026-01-26 22:35:00,901 | INFO     | job 6984043756 has state=finished
[2026-01-26 17:36:09] 2026-01-26 22:35:00,901 | INFO     | preparing for final server update for job 6984043756 in state='finished'
[2026-01-26 17:36:09] 2026-01-26 22:35:00,901 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-6984043756/jobReport.json
[2026-01-26 17:36:09] 2026-01-26 22:35:00,903 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-01-26 17:36:09] 2026-01-26 22:35:00,904 | INFO     | this job has now completed (state=finished)
[2026-01-26 17:36:09] 2026-01-26 22:35:00,904 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 17:36:09] 2026-01-26 22:35:00,904 | INFO     | log transfer has been attempted: DONE
[2026-01-26 17:36:09] 2026-01-26 22:35:00,904 | INFO     | job 6984043756 has finished - writing final server update
[2026-01-26 17:36:09] 2026-01-26 22:35:00,904 | INFO     | total number of processed events: 400 (read)
[2026-01-26 17:36:09] 2026-01-26 22:35:00,908 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6984043756/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 17:36:09] 2026-01-26 22:35:00,908 | INFO     | extracted standard info from prmon json
[2026-01-26 17:36:09] 2026-01-26 22:35:00,908 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 17:36:09] 2026-01-26 22:35:00,908 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 17:36:09] 2026-01-26 22:35:00,908 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 17:36:09] 2026-01-26 22:35:00,909 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 17:36:09] 2026-01-26 22:35:00,910 | INFO     | fitting pss+swap vs Time
[2026-01-26 17:36:09] 2026-01-26 22:35:00,910 | INFO     | sum of square deviations: 141539398.0
[2026-01-26 17:36:09] 2026-01-26 22:35:00,910 | INFO     | sum of deviations: 1176471925.0000002
[2026-01-26 17:36:09] 2026-01-26 22:35:00,910 | INFO     | mean x: 1769464436.0
[2026-01-26 17:36:09] 2026-01-26 22:35:00,910 | INFO     | mean y: 2576584.1298701297
[2026-01-26 17:36:09] 2026-01-26 22:35:00,910 | INFO     | intersect: -14705167412.633207
[2026-01-26 17:36:09] 2026-01-26 22:35:00,911 | INFO     | chi2: 0.0030613803585291684
[2026-01-26 17:36:09] 2026-01-26 22:35:00,911 | INFO     | current memory leak: 8.31 B/s (using 77 data points, chi2=0.00)
[2026-01-26 17:36:09] 2026-01-26 22:35:00,911 | INFO     | could have reported an average CPU frequency of 2746 MHz (6 samples)
[2026-01-26 17:36:09] 2026-01-26 22:35:00,911 | INFO     | ..............................
[2026-01-26 17:36:09] 2026-01-26 22:35:00,911 | INFO     | . Timing measurements:
[2026-01-26 17:36:09] 2026-01-26 22:35:00,911 | INFO     | . get job = 0 s
[2026-01-26 17:36:09] 2026-01-26 22:35:00,911 | INFO     | . initial setup = 4 s
[2026-01-26 17:36:09] 2026-01-26 22:35:00,911 | INFO     | . payload setup = 3 s
[2026-01-26 17:36:09] 2026-01-26 22:35:00,911 | INFO     | . stage-in = 0 s
[2026-01-26 17:36:09] 2026-01-26 22:35:00,911 | INFO     | . payload execution = 5084 s
[2026-01-26 17:36:09] 2026-01-26 22:35:00,911 | INFO     | . stage-out = 0 s
[2026-01-26 17:36:09] 2026-01-26 22:35:00,912 | INFO     | . log creation = 0 s
[2026-01-26 17:36:09] 2026-01-26 22:35:00,912 | INFO     | ..............................
[2026-01-26 17:36:09] 2026-01-26 22:35:01,135 | INFO     | PID=3972382 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 17:36:09] 2026-01-26 22:35:01,135 | INFO     | .. there are 3 such processes running
[2026-01-26 17:36:09] 2026-01-26 22:35:01,390 | INFO     | 
[2026-01-26 17:36:09] 2026-01-26 22:35:01,390 | INFO     | job summary report
[2026-01-26 17:36:09] 2026-01-26 22:35:01,390 | INFO     | --------------------------------------------------
[2026-01-26 17:36:09] 2026-01-26 22:35:01,390 | INFO     | PanDA job id: 6984043756
[2026-01-26 17:36:09] 2026-01-26 22:35:01,391 | INFO     | task id: 48317872
[2026-01-26 17:36:09] 2026-01-26 22:35:01,391 | INFO     | errors: (none)
[2026-01-26 17:36:09] 2026-01-26 22:35:01,391 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 17:36:09] 2026-01-26 22:35:01,391 | INFO     | pilot state: finished 
[2026-01-26 17:36:09] 2026-01-26 22:35:01,391 | INFO     | transexitcode: 0
[2026-01-26 17:36:09] 2026-01-26 22:35:01,391 | INFO     | exeerrorcode: 0
[2026-01-26 17:36:09] 2026-01-26 22:35:01,391 | INFO     | exeerrordiag: 
[2026-01-26 17:36:09] 2026-01-26 22:35:01,391 | INFO     | exitcode: 0
[2026-01-26 17:36:09] 2026-01-26 22:35:01,391 | INFO     | exitmsg: OK
[2026-01-26 17:36:09] 2026-01-26 22:35:01,391 | INFO     | cpuconsumptiontime: 43468 s
[2026-01-26 17:36:09] 2026-01-26 22:35:01,391 | INFO     | nevents: 400
[2026-01-26 17:36:09] 2026-01-26 22:35:01,391 | INFO     | neventsw: 0
[2026-01-26 17:36:09] 2026-01-26 22:35:01,391 | INFO     | pid: 3976883
[2026-01-26 17:36:09] 2026-01-26 22:35:01,391 | INFO     | pgrp: 3976883
[2026-01-26 17:36:09] 2026-01-26 22:35:01,391 | INFO     | corecount: 9
[2026-01-26 17:36:09] 2026-01-26 22:35:01,391 | INFO     | event service: False
[2026-01-26 17:36:09] 2026-01-26 22:35:01,391 | INFO     | sizes: {0: 2284230, 11: 2284230, 5090: 2310665, 5091: 2319663, 5093: 2319719, 5094: 2319913}
[2026-01-26 17:36:09] 2026-01-26 22:35:01,392 | INFO     | --------------------------------------------------
[2026-01-26 17:36:09] 2026-01-26 22:35:01,392 | INFO     | 
[2026-01-26 17:36:09] 2026-01-26 22:35:01,392 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-26 17:36:09] 2026-01-26 22:35:01,404 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 17:36:09] 2026-01-26 22:35:01,404 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 17:36:09] 2026-01-26 22:35:01,404 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 17:36:09] 2026-01-26 22:35:01,404 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 17:36:09] 2026-01-26 22:35:01,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 17:36:09] 2026-01-26 22:35:01,404 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 17:36:09] 2026-01-26 22:35:01,404 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 17:36:09] 2026-01-26 22:35:01,404 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 17:36:09] 2026-01-26 22:35:01,404 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 17:36:09] 2026-01-26 22:35:01,404 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 17:36:09] 2026-01-26 22:35:01,404 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 17:36:09] 2026-01-26 22:35:01,404 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 17:36:09] 2026-01-26 22:35:01,405 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 17:36:09] 2026-01-26 22:35:01,405 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 17:36:09] 2026-01-26 22:35:01,405 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 17:36:09] 2026-01-26 22:35:01,405 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 17:36:09] 2026-01-26 22:35:01,405 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 17:36:09] 2026-01-26 22:35:01,405 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 17:36:09] 2026-01-26 22:35:01,405 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 17:36:09] 2026-01-26 22:35:01,405 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 17:36:09] 2026-01-26 22:35:01,405 | INFO     | job 6984043756 has completed (purged errors)
[2026-01-26 17:36:09] 2026-01-26 22:35:01,405 | INFO     | overall cleanup function is called
[2026-01-26 17:36:09] 2026-01-26 22:35:02,412 | INFO     | --- collectZombieJob: --- 10, [3976883]
[2026-01-26 17:36:09] 2026-01-26 22:35:02,412 | INFO     | zombie collector waiting for pid 3976883
[2026-01-26 17:36:09] 2026-01-26 22:35:02,412 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 17:36:09] 2026-01-26 22:35:02,412 | INFO     | collected zombie processes
[2026-01-26 17:36:09] 2026-01-26 22:35:02,413 | INFO     | will attempt to kill all subprocesses of pid=3976883
[2026-01-26 17:36:09] 2026-01-26 22:35:02,528 | INFO     | process IDs to be killed: [3976883] (in reverse order)
[2026-01-26 17:36:09] 2026-01-26 22:35:02,562 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 17:36:09] 2026-01-26 22:35:02,562 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 17:36:09] 2026-01-26 22:35:02,565 | INFO     | did not find any defunct processes belonging to 3976883
[2026-01-26 17:36:09] 2026-01-26 22:35:02,567 | INFO     | did not find any defunct processes belonging to 3976883
[2026-01-26 17:36:09] 2026-01-26 22:35:02,567 | INFO     | ready for new job
[2026-01-26 17:36:09] 2026-01-26 22:35:02,567 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 17:36:09] 2026-01-26 22:35:02,569 | INFO     | **************************************
[2026-01-26 17:36:09] 2026-01-26 22:35:02,569 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 17:36:09] 2026-01-26 22:35:02,569 | INFO     | **************************************
[2026-01-26 17:36:09] 2026-01-26 22:35:02,569 | INFO     | 
[2026-01-26 17:36:09] 2026-01-26 22:35:02,570 | INFO     | architecture information:
[2026-01-26 17:36:09] 2026-01-26 22:35:02,570 | INFO     | executing command: cat /etc/os-release
[2026-01-26 17:36:09] 2026-01-26 22:35:02,577 | INFO     | cat /etc/os-release:
[2026-01-26 17:36:09] NAME="CentOS Linux"
[2026-01-26 17:36:09] VERSION="7 (Core)"
[2026-01-26 17:36:09] ID="centos"
[2026-01-26 17:36:09] ID_LIKE="rhel fedora"
[2026-01-26 17:36:09] VERSION_ID="7"
[2026-01-26 17:36:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 17:36:09] ANSI_COLOR="0;31"
[2026-01-26 17:36:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 17:36:09] HOME_URL="https://www.centos.org/"
[2026-01-26 17:36:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 17:36:09] 
[2026-01-26 17:36:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 17:36:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 17:36:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 17:36:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 17:36:09] 
[2026-01-26 17:36:09] 2026-01-26 22:35:02,578 | INFO     | **************************************
[2026-01-26 17:36:09] 2026-01-26 22:35:03,080 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-26 17:36:09] 2026-01-26 22:35:03,089 | INFO     | sufficient remaining disk space (39286996992 B)
[2026-01-26 17:36:09] 2026-01-26 22:35:03,089 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 17:36:09] 2026-01-26 22:35:03,089 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 17:36:09] 2026-01-26 22:35:03,090 | INFO     | update_server=False
[2026-01-26 17:36:09] 2026-01-26 22:35:03,090 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 17:36:09] 2026-01-26 22:35:03,090 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 17:36:09] 2026-01-26 22:35:03,090 | INFO     | aborting loop
[2026-01-26 17:36:09] 2026-01-26 22:35:03,136 | INFO     | job.realtimelogging is not enabled
[2026-01-26 17:36:09] 2026-01-26 22:35:03,375 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 17:36:09] 2026-01-26 22:35:04,095 | INFO     | [job] job monitor thread has finished
[2026-01-26 17:36:09] 2026-01-26 22:35:04,095 | INFO     | [job] retrieve thread has finished
[2026-01-26 17:36:09] 2026-01-26 22:35:04,111 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 17:36:09] 2026-01-26 22:35:04,141 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 17:36:09] 2026-01-26 22:35:04,191 | INFO     | all data control threads have been joined
[2026-01-26 17:36:09] 2026-01-26 22:35:04,199 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 17:36:09] 2026-01-26 22:35:04,240 | INFO     | all payload control threads have been joined
[2026-01-26 17:36:09] 2026-01-26 22:35:04,284 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 17:36:09] 2026-01-26 22:35:04,396 | INFO     | all job control threads have been joined
[2026-01-26 17:36:09] 2026-01-26 22:35:04,444 | INFO     | [data] copytool_in thread has finished
[2026-01-26 17:36:09] 2026-01-26 22:35:04,729 | INFO     | [payload] validate_post thread has finished
[2026-01-26 17:36:09] 2026-01-26 22:35:05,197 | INFO     | [data] control thread has finished
[2026-01-26 17:36:09] 2026-01-26 22:35:05,246 | INFO     | [payload] control thread has finished
[2026-01-26 17:36:09] 2026-01-26 22:35:05,381 | INFO     | [data] copytool_out thread has finished
[2026-01-26 17:36:09] 2026-01-26 22:35:05,385 | INFO     | [payload] failed_post thread has finished
[2026-01-26 17:36:09] 2026-01-26 22:35:05,401 | INFO     | [job] control thread has finished
[2026-01-26 17:36:09] 2026-01-26 22:35:05,422 | INFO     | [job] validate thread has finished
[2026-01-26 17:36:09] 2026-01-26 22:35:05,952 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 17:36:09] 2026-01-26 22:35:05,975 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 17:36:09] 2026-01-26 22:35:06,980 | INFO     | [job] queue monitor thread has finished
[2026-01-26 17:36:09] 2026-01-26 22:35:09,958 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 17:36:09] 2026-01-26 22:35:33,339 | INFO     | PID=3972382 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 17:36:09] 2026-01-26 22:35:33,339 | INFO     | .. there are 3 such processes running
[2026-01-26 17:36:09] 2026-01-26 22:35:33,339 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 17:36:09] 2026-01-26 22:35:33,339 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 17:36:09] 2026-01-26 22:35:33,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 17:36:09] 2026-01-26 22:36:02,941 | INFO     | [monitor] cgroup control has ended
[2026-01-26 17:36:09] 2026-01-26 22:36:04,451 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140657828718400)>', '<ExcThread(monitor, started 140657326798592)>']
[2026-01-26 17:36:09] 2026-01-26 22:36:04,483 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 17:36:09] 2026-01-26 22:36:04,483 | INFO     | [monitor] control thread has ended
[2026-01-26 17:36:09] 2026-01-26 22:36:09,476 | INFO     | all workflow threads have been joined
[2026-01-26 17:36:09] 2026-01-26 22:36:09,477 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 17:36:09] 2026-01-26 22:36:09,477 | INFO     | traces error code: 0
[2026-01-26 17:36:09] 2026-01-26 22:36:09,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 17:36:09] 2026-01-26 22:36:09,546 [wrapper] ==== pilot stdout END ====
[2026-01-26 17:36:09] 2026-01-26 22:36:09,548 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 17:36:09] 2026-01-26 22:36:09,550 [wrapper] pilotpid: 3972382
[2026-01-26 17:36:09] 2026-01-26 22:36:09,552 [wrapper] Pilot exit status: 0
[2026-01-26 17:36:09] 2026-01-26 22:36:09,558 [wrapper] pandaids: 6984043756
[2026-01-26 17:36:09] 2026-01-26 22:36:09,582 [wrapper] cleanup supervisor_pilot 4046578 3972383
[2026-01-26 17:36:09] 2026-01-26 22:36:09,584 [wrapper] Test setup, not cleaning
[2026-01-26 17:36:09] 2026-01-26 22:36:09,586 [wrapper] apfmon messages muted
[2026-01-26 17:36:09] 2026-01-26 22:36:09,587 [wrapper] ==== wrapper stdout END ====
[2026-01-26 17:36:09] 2026-01-26 22:36:09,589 [wrapper] ==== wrapper stderr END ====
[2026-01-26 17:36:09]  *** Error codes and diagnostics ***
[2026-01-26 17:36:09]     "exeErrorCode": 0,
[2026-01-26 17:36:09]     "exeErrorDiag": "",
[2026-01-26 17:36:09]     "pilotErrorCode": 0,
[2026-01-26 17:36:09]     "pilotErrorDiag": "",
[2026-01-26 17:36:09]  *** Listing of results directory ***
[2026-01-26 17:36:09] total 672808
[2026-01-26 17:36:09] -rw-r--r--. 1 boincer umatlas    584422 Jan 26 00:14 pilot3.tar.gz
[2026-01-26 17:36:09] -rwx------. 1 boincer umatlas     36322 Jan 26 00:17 runpilot2-wrapper.sh
[2026-01-26 17:36:09] -rw-r--r--. 1 boincer umatlas      5111 Jan 26 00:21 queuedata.json
[2026-01-26 17:36:09] -rw-r--r--. 1 boincer umatlas       100 Jan 26 16:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 17:36:09] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 16:09 run_atlas
[2026-01-26 17:36:09] -rw-r--r--. 1 boincer umatlas       105 Jan 26 16:09 job.xml
[2026-01-26 17:36:09] -rw-r--r--. 2 boincer umatlas 497233968 Jan 26 16:09 EVNT.48317869._000049.pool.root.1
[2026-01-26 17:36:09] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 16:09 start_atlas.sh
[2026-01-26 17:36:09] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 16:09 shared
[2026-01-26 17:36:09] -rw-r--r--. 2 boincer umatlas    597751 Jan 26 16:09 input.tar.gz
[2026-01-26 17:36:09] -rw-r--r--. 1 boincer umatlas         0 Jan 26 16:09 boinc_lockfile
[2026-01-26 17:36:09] -rw-r--r--. 1 boincer umatlas      2513 Jan 26 16:09 pandaJob.out
[2026-01-26 17:36:09] -rw-------. 1 boincer umatlas   1006457 Jan 26 16:09 agis_schedconf.cvmfs.json
[2026-01-26 17:36:09] -rw-------. 1 boincer umatlas   1516246 Jan 26 16:09 agis_ddmendpoints.agis.ALL.json
[2026-01-26 17:36:09] -rw-------. 1 boincer umatlas       435 Jan 26 16:09 workernode_map.json
[2026-01-26 17:36:09] drwx------. 5 boincer umatlas      4096 Jan 26 16:09 pilot3
[2026-01-26 17:36:09] -rw-r--r--. 1 boincer umatlas      6530 Jan 26 17:30 init_data.xml
[2026-01-26 17:36:09] -rw-r--r--. 1 boincer umatlas       530 Jan 26 17:34 boinc_task_state.xml
[2026-01-26 17:36:09] -rw-------. 1 boincer umatlas 185574896 Jan 26 17:34 HITS.48317872._002424.pool.root.1
[2026-01-26 17:36:09] -rw-------. 1 boincer umatlas      1033 Jan 26 17:34 memory_monitor_summary.json
[2026-01-26 17:36:09] -rw-------. 1 boincer umatlas    344129 Jan 26 17:34 log.48317872._002424.job.log.tgz.1
[2026-01-26 17:36:09] -rw-------. 1 boincer umatlas        95 Jan 26 17:34 pilot_heartbeat.json
[2026-01-26 17:36:09] -rw-------. 1 boincer umatlas      6369 Jan 26 17:35 heartbeat.json
[2026-01-26 17:36:09] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 17:36 boinc_mmap_file
[2026-01-26 17:36:09] -rw-r--r--. 1 boincer umatlas        27 Jan 26 17:36 wrapper_checkpoint.txt
[2026-01-26 17:36:09] -rw-------. 1 boincer umatlas      4891 Jan 26 17:36 pilotlog.txt
[2026-01-26 17:36:09] -rw-------. 1 boincer umatlas    754305 Jan 26 17:36 log.48317872._002424.job.log.1
[2026-01-26 17:36:09] -rw-------. 1 boincer umatlas       357 Jan 26 17:36 output.list
[2026-01-26 17:36:09] -rw-r--r--. 1 boincer umatlas       620 Jan 26 17:36 runtime_log
[2026-01-26 17:36:09] -rw-------. 1 boincer umatlas   1116160 Jan 26 17:36 result.tar.gz
[2026-01-26 17:36:09] -rw-r--r--. 1 boincer umatlas      8816 Jan 26 17:36 runtime_log.err
[2026-01-26 17:36:09] -rw-------. 1 boincer umatlas       651 Jan 26 17:36 EBLKDm59T48n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3e2KDmBawoPm.diag
[2026-01-26 17:36:09] -rw-r--r--. 1 boincer umatlas     21639 Jan 26 17:36 stderr.txt
[2026-01-26 17:36:09] HITS file was successfully produced:
[2026-01-26 17:36:09] -rw-------. 1 boincer umatlas 185574896 Jan 26 17:34 shared/HITS.pool.root.1
[2026-01-26 17:36:09]  *** Contents of shared directory: ***
[2026-01-26 17:36:09] total 668512
[2026-01-26 17:36:09] -rw-r--r--. 2 boincer umatlas 497233968 Jan 26 16:09 ATLAS.root_0
[2026-01-26 17:36:09] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 16:09 start_atlas.sh
[2026-01-26 17:36:09] -rw-r--r--. 2 boincer umatlas    597751 Jan 26 16:09 input.tar.gz
[2026-01-26 17:36:09] -rw-------. 1 boincer umatlas 185574896 Jan 26 17:34 HITS.pool.root.1
[2026-01-26 17:36:09] -rw-------. 1 boincer umatlas   1116160 Jan 26 17:36 result.tar.gz
17:36:11 (3968681): run_atlas exited; CPU time 43566.296910
17:36:11 (3968681): called boinc_finish(0)

</stderr_txt>
]]>

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