Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:46:25 (1569556): wrapper (7.7.26015): starting
13:46:25 (1569556): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 13:46:25] Arguments: --nthreads 8
[2026-01-26 13:46:25] Threads: 8
[2026-01-26 13:46:25] Checking for CVMFS
[2026-01-26 13:46:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 13:46:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 13:46:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 13:46:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 13:46:27] 2.13.3.0 11857 57520 374272 155556 0 278 31735112 32935936 16871 16776704 0 101021716 99.553 122964342 40278 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 13:46:27] CVMFS is ok
[2026-01-26 13:46:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 13:46:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 13:46:27] Further information can be found at the LHC@home message board.
[2026-01-26 13:46:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 13:46:27] Checking for apptainer binary...
[2026-01-26 13:46:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 13:46:27] Running /usr/bin/apptainer --version
[2026-01-26 13:46:27] apptainer version 1.4.5-2.el9
[2026-01-26 13:46:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 13:46:27] c6-6-39-3.aglt2.org
[2026-01-26 13:46:27] apptainer works
[2026-01-26 13:46:27] Set ATHENA_PROC_NUMBER=8
[2026-01-26 13:46:27] Set ATHENA_CORE_NUMBER=8
[2026-01-26 13:46:27] Starting ATLAS job with PandaID=6983774076
[2026-01-26 13:46:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 20:22:48]  *** The last 200 lines of the pilot log: ***
[2026-01-26 20:22:48] 2026-01-27 01:22:13,055 | INFO     | time since job start (23666s) is within the limit (349056.0s)
[2026-01-26 20:22:48] 2026-01-27 01:22:13,306 | INFO     | job 6983774076 has state=finished
[2026-01-26 20:22:48] 2026-01-27 01:22:13,306 | INFO     | preparing for final server update for job 6983774076 in state='finished'
[2026-01-26 20:22:48] 2026-01-27 01:22:13,306 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-6983774076/jobReport.json
[2026-01-26 20:22:48] 2026-01-27 01:22:13,308 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-01-26 20:22:48] 2026-01-27 01:22:13,309 | INFO     | this job has now completed (state=finished)
[2026-01-26 20:22:48] 2026-01-27 01:22:13,309 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 20:22:48] 2026-01-27 01:22:13,309 | INFO     | log transfer has been attempted: DONE
[2026-01-26 20:22:48] 2026-01-27 01:22:13,309 | INFO     | job 6983774076 has finished - writing final server update
[2026-01-26 20:22:48] 2026-01-27 01:22:13,309 | INFO     | total number of processed events: 400 (read)
[2026-01-26 20:22:48] 2026-01-27 01:22:13,328 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6983774076/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 20:22:48] 2026-01-27 01:22:13,329 | INFO     | extracted standard info from prmon json
[2026-01-26 20:22:48] 2026-01-27 01:22:13,329 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 20:22:48] 2026-01-27 01:22:13,329 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 20:22:48] 2026-01-27 01:22:13,333 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 20:22:48] 2026-01-27 01:22:13,333 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 20:22:48] 2026-01-27 01:22:13,343 | INFO     | fitting pss+swap vs Time
[2026-01-26 20:22:48] 2026-01-27 01:22:13,344 | INFO     | sum of square deviations: 17972798440.697536
[2026-01-26 20:22:48] 2026-01-27 01:22:13,351 | INFO     | sum of deviations: 62153470333.55815
[2026-01-26 20:22:48] 2026-01-27 01:22:13,352 | INFO     | mean x: 1769465101.8449612
[2026-01-26 20:22:48] 2026-01-27 01:22:13,352 | INFO     | mean y: 2491803.8759689922
[2026-01-26 20:22:48] 2026-01-27 01:22:13,352 | INFO     | intersect: -6116666382.684037
[2026-01-26 20:22:48] 2026-01-27 01:22:13,352 | INFO     | chi2: 2.8024423433423116
[2026-01-26 20:22:48] 2026-01-27 01:22:13,357 | INFO     | sum of square deviations: 17285153764.387394
[2026-01-26 20:22:48] 2026-01-27 01:22:13,360 | INFO     | sum of deviations: 85580604191.55493
[2026-01-26 20:22:48] 2026-01-27 01:22:13,360 | INFO     | mean x: 1769464949.3455498
[2026-01-26 20:22:48] 2026-01-27 01:22:13,360 | INFO     | mean y: 2496943.2382198954
[2026-01-26 20:22:48] 2026-01-27 01:22:13,369 | INFO     | intersect: -8758309094.412796
[2026-01-26 20:22:48] 2026-01-27 01:22:13,369 | INFO     | chi2: 2.1182273438165096
[2026-01-26 20:22:48] 2026-01-27 01:22:13,370 | INFO     | current chi2=2.1182273438165096 (change=24.41495366180409 %)
[2026-01-26 20:22:48] 2026-01-27 01:22:13,370 | INFO     | right removable region: 381
[2026-01-26 20:22:48] 2026-01-27 01:22:13,370 | INFO     | sum of square deviations: 17285048599.581165
[2026-01-26 20:22:48] 2026-01-27 01:22:13,381 | INFO     | sum of deviations: -23107348696.863876
[2026-01-26 20:22:48] 2026-01-27 01:22:13,382 | INFO     | mean x: 1769465254.356021
[2026-01-26 20:22:48] 2026-01-27 01:22:13,382 | INFO     | mean y: 2510653.4842931936
[2026-01-26 20:22:48] 2026-01-27 01:22:13,382 | INFO     | intersect: 2368003027.0712705
[2026-01-26 20:22:48] 2026-01-27 01:22:13,382 | INFO     | chi2: 0.7734903022752831
[2026-01-26 20:22:48] 2026-01-27 01:22:13,382 | INFO     | current chi2=0.7734903022752831 (change=72.39942137925357 %)
[2026-01-26 20:22:48] 2026-01-27 01:22:13,383 | INFO     | sum of square deviations: 16615066533.368721
[2026-01-26 20:22:48] 2026-01-27 01:22:13,394 | INFO     | sum of deviations: -24762080241.281162
[2026-01-26 20:22:48] 2026-01-27 01:22:13,394 | INFO     | mean x: 1769465406.867374
[2026-01-26 20:22:48] 2026-01-27 01:22:13,394 | INFO     | mean y: 2511010.554376658
[2026-01-26 20:22:48] 2026-01-27 01:22:13,395 | INFO     | intersect: 2639614166.3572364
[2026-01-26 20:22:48] 2026-01-27 01:22:13,395 | INFO     | chi2: 0.7353848158230097
[2026-01-26 20:22:48] 2026-01-27 01:22:13,395 | INFO     | current chi2=0.7353848158230097 (change=4.926433639850829 %)
[2026-01-26 20:22:48] 2026-01-27 01:22:13,395 | INFO     | left removable region: 20
[2026-01-26 20:22:48] 2026-01-27 01:22:13,396 | INFO     | sum of square deviations: 14587942094.786669
[2026-01-26 20:22:48] 2026-01-27 01:22:13,407 | INFO     | sum of deviations: 13990930099.390585
[2026-01-26 20:22:48] 2026-01-27 01:22:13,407 | INFO     | mean x: 1769465528.8919668
[2026-01-26 20:22:48] 2026-01-27 01:22:13,407 | INFO     | mean y: 2512970.5484764543
[2026-01-26 20:22:48] 2026-01-27 01:22:13,407 | INFO     | intersect: -1694537125.15049
[2026-01-26 20:22:48] 2026-01-27 01:22:13,407 | INFO     | chi2: 0.007250648054843419
[2026-01-26 20:22:48] 2026-01-27 01:22:13,408 | INFO     | current memory leak: 0.96 B/s (using 361 data points, chi2=0.01)
[2026-01-26 20:22:48] 2026-01-27 01:22:13,408 | INFO     | could have reported an average CPU frequency of 2938 MHz (17 samples)
[2026-01-26 20:22:48] 2026-01-27 01:22:13,408 | INFO     | ..............................
[2026-01-26 20:22:48] 2026-01-27 01:22:13,408 | INFO     | . Timing measurements:
[2026-01-26 20:22:48] 2026-01-27 01:22:13,417 | INFO     | . get job = 0 s
[2026-01-26 20:22:48] 2026-01-27 01:22:13,417 | INFO     | . initial setup = 30 s
[2026-01-26 20:22:48] 2026-01-27 01:22:13,417 | INFO     | . payload setup = 25 s
[2026-01-26 20:22:48] 2026-01-27 01:22:13,417 | INFO     | . stage-in = 0 s
[2026-01-26 20:22:48] 2026-01-27 01:22:13,417 | INFO     | . payload execution = 23611 s
[2026-01-26 20:22:48] 2026-01-27 01:22:13,417 | INFO     | . stage-out = 4 s
[2026-01-26 20:22:48] 2026-01-27 01:22:13,417 | INFO     | . log creation = 0 s
[2026-01-26 20:22:48] 2026-01-27 01:22:13,417 | INFO     | ..............................
[2026-01-26 20:22:48] 2026-01-27 01:22:13,752 | INFO     | 
[2026-01-26 20:22:48] 2026-01-27 01:22:13,753 | INFO     | job summary report
[2026-01-26 20:22:48] 2026-01-27 01:22:13,753 | INFO     | --------------------------------------------------
[2026-01-26 20:22:48] 2026-01-27 01:22:13,753 | INFO     | PanDA job id: 6983774076
[2026-01-26 20:22:48] 2026-01-27 01:22:13,753 | INFO     | task id: 48318042
[2026-01-26 20:22:48] 2026-01-27 01:22:13,753 | INFO     | errors: (none)
[2026-01-26 20:22:48] 2026-01-27 01:22:13,753 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 20:22:48] 2026-01-27 01:22:13,753 | INFO     | pilot state: finished 
[2026-01-26 20:22:48] 2026-01-27 01:22:13,753 | INFO     | transexitcode: 0
[2026-01-26 20:22:48] 2026-01-27 01:22:13,753 | INFO     | exeerrorcode: 0
[2026-01-26 20:22:48] 2026-01-27 01:22:13,753 | INFO     | exeerrordiag: 
[2026-01-26 20:22:48] 2026-01-27 01:22:13,753 | INFO     | exitcode: 0
[2026-01-26 20:22:48] 2026-01-27 01:22:13,753 | INFO     | exitmsg: OK
[2026-01-26 20:22:48] 2026-01-27 01:22:13,753 | INFO     | cpuconsumptiontime: 43001 s
[2026-01-26 20:22:48] 2026-01-27 01:22:13,753 | INFO     | nevents: 400
[2026-01-26 20:22:48] 2026-01-27 01:22:13,754 | INFO     | neventsw: 0
[2026-01-26 20:22:48] 2026-01-27 01:22:13,754 | INFO     | pid: 1581741
[2026-01-26 20:22:48] 2026-01-27 01:22:13,754 | INFO     | pgrp: 1581741
[2026-01-26 20:22:48] 2026-01-27 01:22:13,754 | INFO     | corecount: 8
[2026-01-26 20:22:48] 2026-01-27 01:22:13,754 | INFO     | event service: False
[2026-01-26 20:22:48] 2026-01-27 01:22:13,754 | INFO     | sizes: {0: 2283762, 1: 2283846, 2: 2284307, 13: 2284307, 23641: 2319268, 23642: 2319267, 23648: 2328449, 23651: 2328505, 23654: 2328763}
[2026-01-26 20:22:48] 2026-01-27 01:22:13,754 | INFO     | --------------------------------------------------
[2026-01-26 20:22:48] 2026-01-27 01:22:13,754 | INFO     | 
[2026-01-26 20:22:48] 2026-01-27 01:22:13,754 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-26 20:22:48] 2026-01-27 01:22:13,793 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 20:22:48] 2026-01-27 01:22:13,794 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 20:22:48] 2026-01-27 01:22:13,794 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 20:22:48] 2026-01-27 01:22:13,794 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 20:22:48] 2026-01-27 01:22:13,794 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 20:22:48] 2026-01-27 01:22:13,794 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 20:22:48] 2026-01-27 01:22:13,794 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 20:22:48] 2026-01-27 01:22:13,794 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 20:22:48] 2026-01-27 01:22:13,794 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 20:22:48] 2026-01-27 01:22:13,794 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 20:22:48] 2026-01-27 01:22:13,794 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 20:22:48] 2026-01-27 01:22:13,794 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 20:22:48] 2026-01-27 01:22:13,794 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 20:22:48] 2026-01-27 01:22:13,795 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 20:22:48] 2026-01-27 01:22:13,795 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 20:22:48] 2026-01-27 01:22:13,795 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 20:22:48] 2026-01-27 01:22:13,795 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 20:22:48] 2026-01-27 01:22:13,795 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 20:22:48] 2026-01-27 01:22:13,795 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 20:22:48] 2026-01-27 01:22:13,795 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 20:22:48] 2026-01-27 01:22:13,795 | INFO     | job 6983774076 has completed (purged errors)
[2026-01-26 20:22:48] 2026-01-27 01:22:13,795 | INFO     | overall cleanup function is called
[2026-01-26 20:22:48] 2026-01-27 01:22:14,805 | INFO     | --- collectZombieJob: --- 10, [1581741]
[2026-01-26 20:22:48] 2026-01-27 01:22:14,805 | INFO     | zombie collector waiting for pid 1581741
[2026-01-26 20:22:48] 2026-01-27 01:22:14,805 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 20:22:48] 2026-01-27 01:22:14,805 | INFO     | collected zombie processes
[2026-01-26 20:22:48] 2026-01-27 01:22:14,805 | INFO     | will attempt to kill all subprocesses of pid=1581741
[2026-01-26 20:22:48] 2026-01-27 01:22:16,117 | INFO     | process IDs to be killed: [1581741] (in reverse order)
[2026-01-26 20:22:48] 2026-01-27 01:22:17,105 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 20:22:48] 2026-01-27 01:22:17,105 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 20:22:48] 2026-01-27 01:22:17,175 | INFO     | did not find any defunct processes belonging to 1581741
[2026-01-26 20:22:48] 2026-01-27 01:22:17,272 | INFO     | did not find any defunct processes belonging to 1581741
[2026-01-26 20:22:48] 2026-01-27 01:22:17,272 | INFO     | ready for new job
[2026-01-26 20:22:48] 2026-01-27 01:22:17,272 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 20:22:48] 2026-01-27 01:22:17,275 | INFO     | **************************************
[2026-01-26 20:22:48] 2026-01-27 01:22:17,275 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 20:22:48] 2026-01-27 01:22:17,275 | INFO     | **************************************
[2026-01-26 20:22:48] 2026-01-27 01:22:17,275 | INFO     | 
[2026-01-26 20:22:48] 2026-01-27 01:22:17,302 | INFO     | architecture information:
[2026-01-26 20:22:48] 2026-01-27 01:22:17,322 | INFO     | executing command: cat /etc/os-release
[2026-01-26 20:22:48] 2026-01-27 01:22:17,559 | INFO     | cat /etc/os-release:
[2026-01-26 20:22:48] NAME="CentOS Linux"
[2026-01-26 20:22:48] VERSION="7 (Core)"
[2026-01-26 20:22:48] ID="centos"
[2026-01-26 20:22:48] ID_LIKE="rhel fedora"
[2026-01-26 20:22:48] VERSION_ID="7"
[2026-01-26 20:22:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 20:22:48] ANSI_COLOR="0;31"
[2026-01-26 20:22:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 20:22:48] HOME_URL="https://www.centos.org/"
[2026-01-26 20:22:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 20:22:48] 
[2026-01-26 20:22:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 20:22:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 20:22:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 20:22:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 20:22:48] 
[2026-01-26 20:22:48] 2026-01-27 01:22:17,559 | INFO     | **************************************
[2026-01-26 20:22:48] 2026-01-27 01:22:18,063 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-26 20:22:48] 2026-01-27 01:22:18,281 | INFO     | sufficient remaining disk space (73650929664 B)
[2026-01-26 20:22:48] 2026-01-27 01:22:18,281 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 20:22:48] 2026-01-27 01:22:18,282 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 20:22:48] 2026-01-27 01:22:18,282 | INFO     | update_server=False
[2026-01-26 20:22:48] 2026-01-27 01:22:18,282 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 20:22:48] 2026-01-27 01:22:18,282 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 20:22:48] 2026-01-27 01:22:18,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:22:48] 2026-01-27 01:22:18,282 | INFO     | aborting loop
[2026-01-26 20:22:48] 2026-01-27 01:22:18,389 | INFO     | all job control threads have been joined
[2026-01-26 20:22:48] 2026-01-27 01:22:18,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:22:48] 2026-01-27 01:22:19,016 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 20:22:48] 2026-01-27 01:22:19,061 | INFO     | all data control threads have been joined
[2026-01-26 20:22:48] 2026-01-27 01:22:19,305 | INFO     | [job] retrieve thread has finished
[2026-01-26 20:22:48] 2026-01-27 01:22:19,306 | INFO     | [job] job monitor thread has finished
[2026-01-26 20:22:48] 2026-01-27 01:22:19,380 | INFO     | [payload] validate_post thread has finished
[2026-01-26 20:22:48] 2026-01-27 01:22:19,395 | INFO     | [job] control thread has finished
[2026-01-26 20:22:48] 2026-01-27 01:22:19,495 | INFO     | [payload] failed_post thread has finished
[2026-01-26 20:22:48] 2026-01-27 01:22:19,519 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 20:22:48] 2026-01-27 01:22:19,519 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 20:22:48] 2026-01-27 01:22:19,599 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 20:22:48] 2026-01-27 01:22:19,599 | INFO     | [data] copytool_in thread has finished
[2026-01-26 20:22:48] 2026-01-27 01:22:19,633 | INFO     | all payload control threads have been joined
[2026-01-26 20:22:48] 2026-01-27 01:22:19,796 | INFO     | [job] queue monitor thread has finished
[2026-01-26 20:22:48] 2026-01-27 01:22:20,067 | INFO     | [data] control thread has finished
[2026-01-26 20:22:48] 2026-01-27 01:22:20,157 | INFO     | [job] validate thread has finished
[2026-01-26 20:22:48] 2026-01-27 01:22:20,639 | INFO     | [payload] control thread has finished
[2026-01-26 20:22:48] 2026-01-27 01:22:20,691 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 20:22:48] 2026-01-27 01:22:21,023 | INFO     | [data] copytool_out thread has finished
[2026-01-26 20:22:48] 2026-01-27 01:22:22,291 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 20:22:48] 2026-01-27 01:22:28,681 | INFO     | [monitor] cgroup control has ended
[2026-01-26 20:22:48] 2026-01-27 01:22:30,538 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139986074134336)>', '<ExcThread(monitor, started 139985726465792)>']
[2026-01-26 20:22:48] 2026-01-27 01:22:35,564 | INFO     | all workflow threads have been joined
[2026-01-26 20:22:48] 2026-01-27 01:22:35,564 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 20:22:48] 2026-01-27 01:22:35,564 | INFO     | traces error code: 0
[2026-01-26 20:22:48] 2026-01-27 01:22:35,565 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 20:22:48] 2026-01-27 01:22:46,655 | INFO     | PID=1573584 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 20:22:48] 2026-01-27 01:22:46,656 | INFO     | .. there are 17 such processes running
[2026-01-26 20:22:48] 2026-01-27 01:22:46,656 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 20:22:48] 2026-01-27 01:22:46,657 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 20:22:48] 2026-01-27 01:22:46,657 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 20:22:48] 2026-01-27 01:22:46,657 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 20:22:48] 2026-01-27 01:22:46,657 | CRITICAL | thread 'MainThread' is not alive
[2026-01-26 20:22:48] 2026-01-27 01:22:46,657 | INFO     | [monitor] control thread has ended
[2026-01-26 20:22:48] 2026-01-27 01:22:46,825 [wrapper] ==== pilot stdout END ====
[2026-01-26 20:22:48] 2026-01-27 01:22:46,828 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 20:22:48] 2026-01-27 01:22:46,831 [wrapper] pilotpid: 1573584
[2026-01-26 20:22:48] 2026-01-27 01:22:46,834 [wrapper] Pilot exit status: 0
[2026-01-26 20:22:48] 2026-01-27 01:22:47,001 [wrapper] pandaids: 6983774076
[2026-01-26 20:22:48] 2026-01-27 01:22:47,256 [wrapper] cleanup supervisor_pilot 2730400 1573585
[2026-01-26 20:22:48] 2026-01-27 01:22:47,270 [wrapper] Test setup, not cleaning
[2026-01-26 20:22:48] 2026-01-27 01:22:47,342 [wrapper] apfmon messages muted
[2026-01-26 20:22:48] 2026-01-27 01:22:47,420 [wrapper] ==== wrapper stdout END ====
[2026-01-26 20:22:48] 2026-01-27 01:22:47,455 [wrapper] ==== wrapper stderr END ====
[2026-01-26 20:22:48]  *** Error codes and diagnostics ***
[2026-01-26 20:22:48]     "exeErrorCode": 0,
[2026-01-26 20:22:48]     "exeErrorDiag": "",
[2026-01-26 20:22:48]     "pilotErrorCode": 0,
[2026-01-26 20:22:48]     "pilotErrorDiag": "",
[2026-01-26 20:22:48]  *** Listing of results directory ***
[2026-01-26 20:22:48] total 676556
[2026-01-26 20:22:48] -rw-r--r--. 1 boincer umatlas    584422 Jan 26 00:14 pilot3.tar.gz
[2026-01-26 20:22:48] -rwx------. 1 boincer umatlas     36322 Jan 26 00:15 runpilot2-wrapper.sh
[2026-01-26 20:22:48] -rw-r--r--. 1 boincer umatlas      5111 Jan 26 00:16 queuedata.json
[2026-01-26 20:22:48] -rw-r--r--. 1 boincer umatlas       100 Jan 26 13:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 20:22:48] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 13:46 run_atlas
[2026-01-26 20:22:48] -rw-r--r--. 1 boincer umatlas       105 Jan 26 13:46 job.xml
[2026-01-26 20:22:48] -rw-r--r--. 2 boincer umatlas 501229944 Jan 26 13:46 EVNT.48318040._000048.pool.root.1
[2026-01-26 20:22:48] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 13:46 start_atlas.sh
[2026-01-26 20:22:48] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 13:46 shared
[2026-01-26 20:22:48] -rw-r--r--. 2 boincer umatlas    597764 Jan 26 13:46 input.tar.gz
[2026-01-26 20:22:48] -rw-r--r--. 1 boincer umatlas         0 Jan 26 13:46 boinc_lockfile
[2026-01-26 20:22:48] -rw-r--r--. 1 boincer umatlas      2533 Jan 26 13:46 pandaJob.out
[2026-01-26 20:22:48] -rw-------. 1 boincer umatlas        57 Jan 26 13:46 setup.sh.local
[2026-01-26 20:22:48] -rw-------. 1 boincer umatlas   1006384 Jan 26 13:47 agis_schedconf.cvmfs.json
[2026-01-26 20:22:48] -rw-------. 1 boincer umatlas       441 Jan 26 13:47 workernode_map.json
[2026-01-26 20:22:48] drwx------. 5 boincer umatlas      4096 Jan 26 13:47 pilot3
[2026-01-26 20:22:48] -rw-r--r--. 1 boincer umatlas      6841 Jan 26 20:18 init_data.xml
[2026-01-26 20:22:48] -rw-------. 1 boincer umatlas 180324552 Jan 26 20:20 HITS.48318042._002403.pool.root.1
[2026-01-26 20:22:48] -rw-r--r--. 1 boincer umatlas       531 Jan 26 20:20 boinc_task_state.xml
[2026-01-26 20:22:48] -rw-------. 1 boincer umatlas      1039 Jan 26 20:21 memory_monitor_summary.json
[2026-01-26 20:22:48] -rw-------. 1 boincer umatlas   1516246 Jan 26 20:22 agis_ddmendpoints.agis.ALL.json
[2026-01-26 20:22:48] -rw-------. 1 boincer umatlas    606205 Jan 26 20:22 log.48318042._002403.job.log.tgz.1
[2026-01-26 20:22:48] -rw-------. 1 boincer umatlas        95 Jan 26 20:22 pilot_heartbeat.json
[2026-01-26 20:22:48] -rw-------. 1 boincer umatlas      6382 Jan 26 20:22 heartbeat.json
[2026-01-26 20:22:48] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 20:22 boinc_mmap_file
[2026-01-26 20:22:48] -rw-r--r--. 1 boincer umatlas        28 Jan 26 20:22 wrapper_checkpoint.txt
[2026-01-26 20:22:48] -rw-------. 1 boincer umatlas       893 Jan 26 20:22 pilotlog.txt
[2026-01-26 20:22:48] -rw-------. 1 boincer umatlas   3046521 Jan 26 20:22 log.48318042._002403.job.log.1
[2026-01-26 20:22:48] -rw-------. 1 boincer umatlas       357 Jan 26 20:22 output.list
[2026-01-26 20:22:48] -rw-r--r--. 1 boincer umatlas       620 Jan 26 20:22 runtime_log
[2026-01-26 20:22:48] -rw-------. 1 boincer umatlas   3665920 Jan 26 20:22 result.tar.gz
[2026-01-26 20:22:48] -rw-------. 1 boincer umatlas       657 Jan 26 20:22 yyENDme7T48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkb2KDm5AbJrm.diag
[2026-01-26 20:22:48] -rw-r--r--. 1 boincer umatlas      9347 Jan 26 20:22 runtime_log.err
[2026-01-26 20:22:48] -rw-r--r--. 1 boincer umatlas     21341 Jan 26 20:22 stderr.txt
[2026-01-26 20:22:48] HITS file was successfully produced:
[2026-01-26 20:22:48] -rw-------. 1 boincer umatlas 180324552 Jan 26 20:20 shared/HITS.pool.root.1
[2026-01-26 20:22:48]  *** Contents of shared directory: ***
[2026-01-26 20:22:48] total 669772
[2026-01-26 20:22:48] -rw-r--r--. 2 boincer umatlas 501229944 Jan 26 13:46 ATLAS.root_0
[2026-01-26 20:22:48] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 13:46 start_atlas.sh
[2026-01-26 20:22:48] -rw-r--r--. 2 boincer umatlas    597764 Jan 26 13:46 input.tar.gz
[2026-01-26 20:22:48] -rw-------. 1 boincer umatlas 180324552 Jan 26 20:20 HITS.pool.root.1
[2026-01-26 20:22:48] -rw-------. 1 boincer umatlas   3665920 Jan 26 20:22 result.tar.gz
20:22:50 (1569556): run_atlas exited; CPU time 43829.068287
20:22:50 (1569556): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN