Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
21:20:33 (197167): wrapper (7.7.26015): starting
21:20:33 (197167): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 21:20:33] Arguments: --nthreads 4
[2026-01-26 21:20:33] Threads: 4
[2026-01-26 21:20:33] Checking for CVMFS
[2026-01-26 21:20:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 21:20:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 21:20:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 21:20:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 21:20:33] 2.13.1.0 4237 464 59956 155561 1 11 8872779 10240001 1822 130560 0 506603 99.992 23066 524 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-01-26 21:20:33] CVMFS is ok
[2026-01-26 21:20:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 21:20:33] Checking for apptainer binary...
[2026-01-26 21:20:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 21:20:33] Running /usr/bin/apptainer --version
[2026-01-26 21:20:33] apptainer version 1.4.5
[2026-01-26 21:20:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 21:20:34] woolyvlneu
[2026-01-26 21:20:34] apptainer works
[2026-01-26 21:20:34] Set ATHENA_PROC_NUMBER=4
[2026-01-26 21:20:34] Set ATHENA_CORE_NUMBER=4
[2026-01-26 21:20:34] Starting ATLAS job with PandaID=6984043453
[2026-01-26 21:20:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 22:49:01]  *** The last 200 lines of the pilot log: ***
[2026-01-26 22:49:01]  filesize=313898
[2026-01-26 22:49:01]  filetype=log
[2026-01-26 22:49:01]  guid=9ce9e3d5-b3da-4b0b-99ef-f6cb881fcaf4
[2026-01-26 22:49:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 22:49:01]  is_altstaged=None
[2026-01-26 22:49:01]  is_tar=False
[2026-01-26 22:49:01]  lfn=log.48317911._000802.job.log.tgz.1
[2026-01-26 22:49:01]  mtime=0
[2026-01-26 22:49:01]  protocol_id=None
[2026-01-26 22:49:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 22:49:01]  replicas=None
[2026-01-26 22:49:01]  scope=mc23_13p6TeV
[2026-01-26 22:49:01]  status=None
[2026-01-26 22:49:01]  status_code=0
[2026-01-26 22:49:01]  storage_token=
[2026-01-26 22:49:01]  surl=/var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6984043453/log.48317911._000802.job.log.tgz.1
[2026-01-26 22:49:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/ba/log.48317911._000802.job.log.tgz.1
[2026-01-26 22:49:01]  workdir=None
[2026-01-26 22:49:01] ]
[2026-01-26 22:49:01] 2026-01-26 21:48:19,462 | INFO     | transferring file log.48317911._000802.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6984043453/log.48317911._000802.job.log.tgz.1 to /var/li
[2026-01-26 22:49:01] 2026-01-26 21:48:19,462 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6984043453/log.48317911._000802.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-01-26 22:49:01] 2026-01-26 21:48:19,481 | INFO     | adding to output.list: log.48317911._000802.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/ba/log.48317911._000802.job.log.tg
[2026-01-26 22:49:01] 2026-01-26 21:48:19,481 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 22:49:01] 2026-01-26 21:48:19,481 | INFO     | summary of transferred files:
[2026-01-26 22:49:01] 2026-01-26 21:48:19,481 | INFO     |  -- lfn=log.48317911._000802.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 22:49:01] 2026-01-26 21:48:19,481 | INFO     | stage-out finished correctly
[2026-01-26 22:49:01] 2026-01-26 21:48:19,945 | INFO     | monitor loop #403: job 0:6984043453 is in state 'finished'
[2026-01-26 22:49:01] 2026-01-26 21:48:19,945 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 22:49:01] 2026-01-26 21:48:20,306 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 22:49:01] 2026-01-26 21:48:20,526 | INFO     | time since job start (5250s) is within the limit (349056.0s)
[2026-01-26 22:49:01] 2026-01-26 21:48:21,152 | INFO     | job 6984043453 has state=finished
[2026-01-26 22:49:01] 2026-01-26 21:48:21,153 | INFO     | preparing for final server update for job 6984043453 in state='finished'
[2026-01-26 22:49:01] 2026-01-26 21:48:21,153 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6984043453/jobReport.json
[2026-01-26 22:49:01] 2026-01-26 21:48:21,154 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/1/workernode_map.json
[2026-01-26 22:49:01] 2026-01-26 21:48:21,154 | INFO     | this job has now completed (state=finished)
[2026-01-26 22:49:01] 2026-01-26 21:48:21,154 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 22:49:01] 2026-01-26 21:48:21,154 | INFO     | log transfer has been attempted: DONE
[2026-01-26 22:49:01] 2026-01-26 21:48:21,154 | INFO     | job 6984043453 has finished - writing final server update
[2026-01-26 22:49:01] 2026-01-26 21:48:21,154 | INFO     | total number of processed events: 400 (read)
[2026-01-26 22:49:01] 2026-01-26 21:48:21,156 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6984043453/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 22:49:01] 2026-01-26 21:48:21,156 | INFO     | extracted standard info from prmon json
[2026-01-26 22:49:01] 2026-01-26 21:48:21,156 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 22:49:01] 2026-01-26 21:48:21,156 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 22:49:01] 2026-01-26 21:48:21,156 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 22:49:01] 2026-01-26 21:48:21,156 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 22:49:01] 2026-01-26 21:48:21,157 | INFO     | fitting pss+swap vs Time
[2026-01-26 22:49:01] 2026-01-26 21:48:21,157 | INFO     | sum of square deviations: 152858680.0
[2026-01-26 22:49:01] 2026-01-26 21:48:21,157 | INFO     | sum of deviations: -17730693221.999996
[2026-01-26 22:49:01] 2026-01-26 21:48:21,157 | INFO     | mean x: 1769461556.0
[2026-01-26 22:49:01] 2026-01-26 21:48:21,157 | INFO     | mean y: 2573289.253164557
[2026-01-26 22:49:01] 2026-01-26 21:48:21,157 | INFO     | intersect: 205249537462.68948
[2026-01-26 22:49:01] 2026-01-26 21:48:21,158 | INFO     | chi2: 0.06982491856535172
[2026-01-26 22:49:01] 2026-01-26 21:48:21,158 | INFO     | current memory leak: -115.99 B/s (using 79 data points, chi2=0.07)
[2026-01-26 22:49:01] 2026-01-26 21:48:21,158 | INFO     | could have reported an average CPU frequency of 3700 MHz (6 samples)
[2026-01-26 22:49:01] 2026-01-26 21:48:21,158 | INFO     | ..............................
[2026-01-26 22:49:01] 2026-01-26 21:48:21,158 | INFO     | . Timing measurements:
[2026-01-26 22:49:01] 2026-01-26 21:48:21,158 | INFO     | . get job = 0 s
[2026-01-26 22:49:01] 2026-01-26 21:48:21,158 | INFO     | . initial setup = 6 s
[2026-01-26 22:49:01] 2026-01-26 21:48:21,158 | INFO     | . payload setup = 5 s
[2026-01-26 22:49:01] 2026-01-26 21:48:21,158 | INFO     | . stage-in = 0 s
[2026-01-26 22:49:01] 2026-01-26 21:48:21,158 | INFO     | . payload execution = 5227 s
[2026-01-26 22:49:01] 2026-01-26 21:48:21,158 | INFO     | . stage-out = 0 s
[2026-01-26 22:49:01] 2026-01-26 21:48:21,158 | INFO     | . log creation = 0 s
[2026-01-26 22:49:01] 2026-01-26 21:48:21,158 | INFO     | ..............................
[2026-01-26 22:49:01] 2026-01-26 21:48:21,354 | INFO     | 
[2026-01-26 22:49:01] 2026-01-26 21:48:21,354 | INFO     | job summary report
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | --------------------------------------------------
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | PanDA job id: 6984043453
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | task id: 48317911
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | errors: (none)
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | pilot state: finished 
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | transexitcode: 0
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | exeerrorcode: 0
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | exeerrordiag: 
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | exitcode: 0
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | exitmsg: OK
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | cpuconsumptiontime: 19885 s
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | nevents: 400
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | neventsw: 0
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | pid: 205705
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | pgrp: 205705
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | corecount: 4
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | event service: False
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | sizes: {0: 2284220, 11: 2284220, 5236: 2310604, 5238: 2319630, 5239: 2319880}
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | --------------------------------------------------
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | 
[2026-01-26 22:49:01] 2026-01-26 21:48:21,355 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | job 6984043453 has completed (purged errors)
[2026-01-26 22:49:01] 2026-01-26 21:48:21,373 | INFO     | overall cleanup function is called
[2026-01-26 22:49:01] 2026-01-26 21:48:22,381 | INFO     | --- collectZombieJob: --- 10, [205705]
[2026-01-26 22:49:01] 2026-01-26 21:48:22,381 | INFO     | zombie collector waiting for pid 205705
[2026-01-26 22:49:01] 2026-01-26 21:48:22,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 22:49:01] 2026-01-26 21:48:22,381 | INFO     | collected zombie processes
[2026-01-26 22:49:01] 2026-01-26 21:48:22,381 | INFO     | will attempt to kill all subprocesses of pid=205705
[2026-01-26 22:49:01] 2026-01-26 21:48:22,475 | INFO     | process IDs to be killed: [205705] (in reverse order)
[2026-01-26 22:49:01] 2026-01-26 21:48:22,521 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 22:49:01] 2026-01-26 21:48:22,521 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 22:49:01] 2026-01-26 21:48:22,523 | INFO     | did not find any defunct processes belonging to 205705
[2026-01-26 22:49:01] 2026-01-26 21:48:22,526 | INFO     | did not find any defunct processes belonging to 205705
[2026-01-26 22:49:01] 2026-01-26 21:48:22,526 | INFO     | ready for new job
[2026-01-26 22:49:01] 2026-01-26 21:48:22,526 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 22:49:01] 2026-01-26 21:48:22,527 | INFO     | **************************************
[2026-01-26 22:49:01] 2026-01-26 21:48:22,527 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 22:49:01] 2026-01-26 21:48:22,527 | INFO     | **************************************
[2026-01-26 22:49:01] 2026-01-26 21:48:22,527 | INFO     | 
[2026-01-26 22:49:01] 2026-01-26 21:48:22,528 | INFO     | pilot is running in a VM
[2026-01-26 22:49:01] 2026-01-26 21:48:22,528 | INFO     | architecture information:
[2026-01-26 22:49:01] 2026-01-26 21:48:22,528 | INFO     | executing command: cat /etc/os-release
[2026-01-26 22:49:01] 2026-01-26 21:48:22,540 | INFO     | cat /etc/os-release:
[2026-01-26 22:49:01] NAME="CentOS Linux"
[2026-01-26 22:49:01] VERSION="7 (Core)"
[2026-01-26 22:49:01] ID="centos"
[2026-01-26 22:49:01] ID_LIKE="rhel fedora"
[2026-01-26 22:49:01] VERSION_ID="7"
[2026-01-26 22:49:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 22:49:01] ANSI_COLOR="0;31"
[2026-01-26 22:49:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 22:49:01] HOME_URL="https://www.centos.org/"
[2026-01-26 22:49:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 22:49:01] 
[2026-01-26 22:49:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 22:49:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 22:49:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 22:49:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 22:49:01] 
[2026-01-26 22:49:01] 2026-01-26 21:48:22,540 | INFO     | **************************************
[2026-01-26 22:49:01] 2026-01-26 21:48:23,043 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2026-01-26 22:49:01] 2026-01-26 21:48:23,054 | INFO     | sufficient remaining disk space (42086694912 B)
[2026-01-26 22:49:01] 2026-01-26 21:48:23,055 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 22:49:01] 2026-01-26 21:48:23,055 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 22:49:01] 2026-01-26 21:48:23,055 | INFO     | update_server=False
[2026-01-26 22:49:01] 2026-01-26 21:48:23,055 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 22:49:01] 2026-01-26 21:48:23,055 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 22:49:01] 2026-01-26 21:48:23,055 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 22:49:01] 2026-01-26 21:48:23,283 | INFO     | all job control threads have been joined
[2026-01-26 22:49:01] 2026-01-26 21:48:23,455 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 22:49:01] 2026-01-26 21:48:23,455 | INFO     | aborting loop
[2026-01-26 22:49:01] 2026-01-26 21:48:23,706 | INFO     | all data control threads have been joined
[2026-01-26 22:49:01] 2026-01-26 21:48:23,988 | INFO     | all payload control threads have been joined
[2026-01-26 22:49:01] 2026-01-26 21:48:24,059 | INFO     | [job] queue monitor thread has finished
[2026-01-26 22:49:01] 2026-01-26 21:48:24,060 | INFO     | [job] retrieve thread has finished
[2026-01-26 22:49:01] 2026-01-26 21:48:24,073 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 22:49:01] 2026-01-26 21:48:24,163 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 22:49:01] 2026-01-26 21:48:24,276 | INFO     | [data] copytool_in thread has finished
[2026-01-26 22:49:01] 2026-01-26 21:48:24,289 | INFO     | [job] control thread has finished
[2026-01-26 22:49:01] 2026-01-26 21:48:24,320 | INFO     | [payload] failed_post thread has finished
[2026-01-26 22:49:01] 2026-01-26 21:48:24,460 | INFO     | [job] job monitor thread has finished
[2026-01-26 22:49:01] 2026-01-26 21:48:24,712 | INFO     | [data] control thread has finished
[2026-01-26 22:49:01] 2026-01-26 21:48:24,835 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 22:49:01] 2026-01-26 21:48:24,993 | INFO     | [payload] control thread has finished
[2026-01-26 22:49:01] 2026-01-26 21:48:25,058 | INFO     | [data] copytool_out thread has finished
[2026-01-26 22:49:01] 2026-01-26 21:48:25,271 | INFO     | [payload] validate_post thread has finished
[2026-01-26 22:49:01] 2026-01-26 21:48:25,482 | INFO     | [job] validate thread has finished
[2026-01-26 22:49:01] 2026-01-26 21:48:25,527 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 22:49:01] 2026-01-26 21:48:26,346 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 22:49:01] 2026-01-26 21:48:30,353 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 22:49:01] 2026-01-26 21:48:53,708 | INFO     | PID=201179 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 22:49:01] 2026-01-26 21:48:53,708 | INFO     | .. there are 3 such processes running
[2026-01-26 22:49:01] 2026-01-26 21:48:53,709 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 22:49:01] 2026-01-26 21:48:53,709 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 22:49:01] 2026-01-26 21:48:53,709 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 22:49:01] 2026-01-26 21:48:56,188 | INFO     | [monitor] cgroup control has ended
[2026-01-26 22:49:01] 2026-01-26 21:48:56,374 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124151141504832)>', '<ExcThread(monitor, started 124149896824576)>']
[2026-01-26 22:49:01] 2026-01-26 21:48:56,725 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 22:49:01] 2026-01-26 21:48:56,725 | INFO     | [monitor] control thread has ended
[2026-01-26 22:49:01] 2026-01-26 21:49:01,387 | INFO     | all workflow threads have been joined
[2026-01-26 22:49:01] 2026-01-26 21:49:01,387 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 22:49:01] 2026-01-26 21:49:01,387 | INFO     | traces error code: 0
[2026-01-26 22:49:01] 2026-01-26 21:49:01,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 22:49:01] 2026-01-26 21:49:01,446 [wrapper] ==== pilot stdout END ====
[2026-01-26 22:49:01] 2026-01-26 21:49:01,450 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 22:49:01] 2026-01-26 21:49:01,453 [wrapper] pilotpid: 201179
[2026-01-26 22:49:01] 2026-01-26 21:49:01,456 [wrapper] Pilot exit status: 0
[2026-01-26 22:49:01] 2026-01-26 21:49:01,470 [wrapper] pandaids: 6984043453
[2026-01-26 22:49:01] 2026-01-26 21:49:01,503 [wrapper] cleanup supervisor_pilot  243266 201180
[2026-01-26 22:49:01] 2026-01-26 21:49:01,507 [wrapper] Test setup, not cleaning
[2026-01-26 22:49:01] 2026-01-26 21:49:01,510 [wrapper] apfmon messages muted
[2026-01-26 22:49:01] 2026-01-26 21:49:01,514 [wrapper] ==== wrapper stdout END ====
[2026-01-26 22:49:01] 2026-01-26 21:49:01,517 [wrapper] ==== wrapper stderr END ====
[2026-01-26 22:49:01]  *** Error codes and diagnostics ***
[2026-01-26 22:49:01]     "exeErrorCode": 0,
[2026-01-26 22:49:01]     "exeErrorDiag": "",
[2026-01-26 22:49:01]     "pilotErrorCode": 0,
[2026-01-26 22:49:01]     "pilotErrorDiag": "",
[2026-01-26 22:49:01]  *** Listing of results directory ***
[2026-01-26 22:49:01] insgesamt 727820
[2026-01-26 22:49:01] -rw-r--r-- 1 yeti boinc    584422 Jan 26 06:14 pilot3.tar.gz
[2026-01-26 22:49:01] -rwx------ 1 yeti boinc     36322 Jan 26 06:15 runpilot2-wrapper.sh
[2026-01-26 22:49:01] -rw-r--r-- 1 yeti boinc      5111 Jan 26 06:16 queuedata.json
[2026-01-26 22:49:01] -rw-r--r-- 1 yeti boinc       100 Jan 26 21:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 22:49:01] -rwxr-xr-x 1 yeti boinc      7986 Jan 26 21:20 run_atlas
[2026-01-26 22:49:01] -rw-r--r-- 1 yeti boinc       105 Jan 26 21:20 job.xml
[2026-01-26 22:49:01] -rw-r--r-- 2 yeti boinc 535373211 Jan 26 21:20 EVNT.48317909._000027.pool.root.1
[2026-01-26 22:49:01] -rw-r--r-- 2 yeti boinc     15845 Jan 26 21:20 start_atlas.sh
[2026-01-26 22:49:01] drwxrwx--x 2 yeti boinc      4096 Jan 26 21:20 shared
[2026-01-26 22:49:01] -rw-r--r-- 2 yeti boinc    597757 Jan 26 21:20 input.tar.gz
[2026-01-26 22:49:01] -rw-r--r-- 1 yeti boinc      6560 Jan 26 21:20 init_data.xml
[2026-01-26 22:49:01] -rw-r--r-- 1 yeti boinc         0 Jan 26 21:20 boinc_setup_complete
[2026-01-26 22:49:01] -rw-r--r-- 1 yeti boinc         0 Jan 26 21:20 boinc_lockfile
[2026-01-26 22:49:01] -rw-r--r-- 1 yeti boinc      2498 Jan 26 21:20 pandaJob.out
[2026-01-26 22:49:01] -rw------- 1 yeti boinc        52 Jan 26 21:20 setup.sh.local
[2026-01-26 22:49:01] -rw------- 1 yeti boinc   1006457 Jan 26 21:20 agis_schedconf.cvmfs.json
[2026-01-26 22:49:01] -rw------- 1 yeti boinc   1516246 Jan 26 21:20 agis_ddmendpoints.agis.ALL.json
[2026-01-26 22:49:01] -rw------- 1 yeti boinc       423 Jan 26 21:20 workernode_map.json
[2026-01-26 22:49:01] drwx------ 5 yeti boinc      4096 Jan 26 21:20 pilot3
[2026-01-26 22:49:01] -rw------- 1 yeti boinc 203769249 Jan 26 22:47 HITS.48317911._000802.pool.root.1
[2026-01-26 22:49:01] -rw-r--r-- 1 yeti boinc       530 Jan 26 22:47 boinc_task_state.xml
[2026-01-26 22:49:01] -rw------- 1 yeti boinc      1016 Jan 26 22:48 memory_monitor_summary.json
[2026-01-26 22:49:01] -rw------- 1 yeti boinc    313898 Jan 26 22:48 log.48317911._000802.job.log.tgz.1
[2026-01-26 22:49:01] -rw------- 1 yeti boinc      6283 Jan 26 22:48 heartbeat.json
[2026-01-26 22:49:01] -rw------- 1 yeti boinc        95 Jan 26 22:48 pilot_heartbeat.json
[2026-01-26 22:49:01] -rw-r--r-- 1 yeti boinc        27 Jan 26 22:48 wrapper_checkpoint.txt
[2026-01-26 22:49:01] -rw-r--r-- 1 yeti boinc      8192 Jan 26 22:48 boinc_mmap_file
[2026-01-26 22:49:01] -rw------- 1 yeti boinc      4894 Jan 26 22:49 pilotlog.txt
[2026-01-26 22:49:01] -rw------- 1 yeti boinc    784759 Jan 26 22:49 log.48317911._000802.job.log.1
[2026-01-26 22:49:01] -rw------- 1 yeti boinc       357 Jan 26 22:49 output.list
[2026-01-26 22:49:01] -rw-r--r-- 1 yeti boinc       620 Jan 26 22:49 runtime_log
[2026-01-26 22:49:01] -rw------- 1 yeti boinc   1116160 Jan 26 22:49 result.tar.gz
[2026-01-26 22:49:01] -rw-r--r-- 1 yeti boinc      9551 Jan 26 22:49 runtime_log.err
[2026-01-26 22:49:01] -rw------- 1 yeti boinc       640 Jan 26 22:49 NEiLDm07T48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVd2KDmQnZwdm.diag
[2026-01-26 22:49:01] -rw-r--r-- 1 yeti boinc     20923 Jan 26 22:49 stderr.txt
[2026-01-26 22:49:01] HITS file was successfully produced:
[2026-01-26 22:49:01] -rw------- 1 yeti boinc 203769249 Jan 26 22:47 shared/HITS.pool.root.1
[2026-01-26 22:49:01]  *** Contents of shared directory: ***
[2026-01-26 22:49:01] insgesamt 723524
[2026-01-26 22:49:01] -rw-r--r-- 2 yeti boinc 535373211 Jan 26 21:20 ATLAS.root_0
[2026-01-26 22:49:01] -rw-r--r-- 2 yeti boinc     15845 Jan 26 21:20 start_atlas.sh
[2026-01-26 22:49:01] -rw-r--r-- 2 yeti boinc    597757 Jan 26 21:20 input.tar.gz
[2026-01-26 22:49:01] -rw------- 1 yeti boinc 203769249 Jan 26 22:47 HITS.pool.root.1
[2026-01-26 22:49:01] -rw------- 1 yeti boinc   1116160 Jan 26 22:49 result.tar.gz
22:49:03 (197167): run_atlas exited; CPU time 19939.623692
22:49:03 (197167): called boinc_finish(0)

</stderr_txt>
]]>

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