Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:33:58 (4747): wrapper (7.7.26015): starting
11:33:58 (4747): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 11:33:58] Arguments: --nthreads 8
[2026-01-26 11:33:58] Threads: 8
[2026-01-26 11:33:58] Checking for CVMFS
[2026-01-26 11:33:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 11:33:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 11:33:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 11:33:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 11:33:59] 2.11.2.0 7040 205768 146940 155553 3 188 11438027 18432000 1767 130560 0 138752147 99.981 7731417 30388 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 11:33:59] CVMFS is ok
[2026-01-26 11:33:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 11:33:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 11:33:59] Further information can be found at the LHC@home message board.
[2026-01-26 11:33:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 11:33:59] Checking for apptainer binary...
[2026-01-26 11:33:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 11:33:59] Running /usr/bin/apptainer --version
[2026-01-26 11:33:59] apptainer version 1.3.2-1.el7
[2026-01-26 11:33:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 11:33:59] c-206-7.aglt2.org
[2026-01-26 11:33:59] apptainer works
[2026-01-26 11:33:59] Set ATHENA_PROC_NUMBER=8
[2026-01-26 11:33:59] Set ATHENA_CORE_NUMBER=8
[2026-01-26 11:33:59] Starting ATLAS job with PandaID=6983773771
[2026-01-26 11:33:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 14:58:37]  *** The last 200 lines of the pilot log: ***
[2026-01-26 14:58:37] 2026-01-26 19:57:48,383 | INFO     | mean y: 2470565.015
[2026-01-26 14:58:37] 2026-01-26 19:57:48,383 | INFO     | intersect: -21261430279.53358
[2026-01-26 14:58:37] 2026-01-26 19:57:48,383 | INFO     | chi2: 1.2215901310655437
[2026-01-26 14:58:37] 2026-01-26 19:57:48,384 | INFO     | sum of square deviations: 2299168690.0
[2026-01-26 14:58:37] 2026-01-26 19:57:48,385 | INFO     | sum of deviations: 28910061352.0
[2026-01-26 14:58:37] 2026-01-26 19:57:48,385 | INFO     | mean x: 1769451189.0
[2026-01-26 14:58:37] 2026-01-26 19:57:48,385 | INFO     | mean y: 2469808.435897436
[2026-01-26 14:58:37] 2026-01-26 19:57:48,385 | INFO     | intersect: -22246851285.685017
[2026-01-26 14:58:37] 2026-01-26 19:57:48,385 | INFO     | chi2: 1.222092375622012
[2026-01-26 14:58:37] 2026-01-26 19:57:48,385 | INFO     | current chi2=1.222092375622012 (change=-0.04111399917991334 %)
[2026-01-26 14:58:37] 2026-01-26 19:57:48,385 | INFO     | right removable region: 194
[2026-01-26 14:58:37] 2026-01-26 19:57:48,386 | INFO     | sum of square deviations: 2299168690.0
[2026-01-26 14:58:37] 2026-01-26 19:57:48,387 | INFO     | sum of deviations: 4063832809.9999995
[2026-01-26 14:58:37] 2026-01-26 19:57:48,387 | INFO     | mean x: 1769451494.0
[2026-01-26 14:58:37] 2026-01-26 19:57:48,387 | INFO     | mean y: 2491922.6358974357
[2026-01-26 14:58:37] 2026-01-26 19:57:48,387 | INFO     | intersect: -3125053728.2318153
[2026-01-26 14:58:37] 2026-01-26 19:57:48,387 | INFO     | chi2: 0.00351727678859802
[2026-01-26 14:58:37] 2026-01-26 19:57:48,387 | INFO     | current chi2=0.00351727678859802 (change=99.71207390276393 %)
[2026-01-26 14:58:37] 2026-01-26 19:57:48,388 | INFO     | sum of square deviations: 2126802667.5
[2026-01-26 14:58:37] 2026-01-26 19:57:48,389 | INFO     | sum of deviations: 4887205991.000004
[2026-01-26 14:58:37] 2026-01-26 19:57:48,389 | INFO     | mean x: 1769451646.5
[2026-01-26 14:58:37] 2026-01-26 19:57:48,389 | INFO     | mean y: 2491188.094736842
[2026-01-26 14:58:37] 2026-01-26 19:57:48,389 | INFO     | intersect: -4063553499.410161
[2026-01-26 14:58:37] 2026-01-26 19:57:48,389 | INFO     | chi2: 0.0020198144854364454
[2026-01-26 14:58:37] 2026-01-26 19:57:48,389 | INFO     | current chi2=0.0020198144854364454 (change=42.574480007257556 %)
[2026-01-26 14:58:37] 2026-01-26 19:57:48,390 | INFO     | sum of square deviations: 1963274020.0
[2026-01-26 14:58:37] 2026-01-26 19:57:48,390 | INFO     | sum of deviations: 4909695776.0
[2026-01-26 14:58:37] 2026-01-26 19:57:48,390 | INFO     | mean x: 1769451799.0
[2026-01-26 14:58:37] 2026-01-26 19:57:48,391 | INFO     | mean y: 2491181.762162162
[2026-01-26 14:58:37] 2026-01-26 19:57:48,391 | INFO     | intersect: -4422499896.857572
[2026-01-26 14:58:37] 2026-01-26 19:57:48,391 | INFO     | chi2: 0.00021646594639884156
[2026-01-26 14:58:37] 2026-01-26 19:57:48,391 | INFO     | current chi2=0.00021646594639884156 (change=89.28287979120681 %)
[2026-01-26 14:58:37] 2026-01-26 19:57:48,391 | INFO     | sum of square deviations: 1808350185.0
[2026-01-26 14:58:37] 2026-01-26 19:57:48,392 | INFO     | sum of deviations: 4271331233.5000005
[2026-01-26 14:58:37] 2026-01-26 19:57:48,392 | INFO     | mean x: 1769451951.5
[2026-01-26 14:58:37] 2026-01-26 19:57:48,392 | INFO     | mean y: 2491809.0166666666
[2026-01-26 14:58:37] 2026-01-26 19:57:48,393 | INFO     | intersect: -4176961622.7971926
[2026-01-26 14:58:37] 2026-01-26 19:57:48,393 | INFO     | chi2: 0.0001376883038183898
[2026-01-26 14:58:37] 2026-01-26 19:57:48,393 | INFO     | current chi2=0.0001376883038183898 (change=36.39262613404458 %)
[2026-01-26 14:58:37] 2026-01-26 19:57:48,393 | INFO     | sum of square deviations: 1661798600.0
[2026-01-26 14:58:37] 2026-01-26 19:57:48,394 | INFO     | sum of deviations: 3923885084.9999995
[2026-01-26 14:58:37] 2026-01-26 19:57:48,394 | INFO     | mean x: 1769452104.0
[2026-01-26 14:58:37] 2026-01-26 19:57:48,394 | INFO     | mean y: 2492169.982857143
[2026-01-26 14:58:37] 2026-01-26 19:57:48,394 | INFO     | intersect: -4175587363.5463367
[2026-01-26 14:58:37] 2026-01-26 19:57:48,395 | INFO     | chi2: 0.0001348881072788212
[2026-01-26 14:58:37] 2026-01-26 19:57:48,395 | INFO     | current chi2=0.0001348881072788212 (change=2.033721428700341 %)
[2026-01-26 14:58:37] 2026-01-26 19:57:48,395 | INFO     | left removable region: 50
[2026-01-26 14:58:37] 2026-01-26 19:57:48,395 | INFO     | sum of square deviations: 925859220.0
[2026-01-26 14:58:37] 2026-01-26 19:57:48,396 | INFO     | sum of deviations: 2272352540.9999995
[2026-01-26 14:58:37] 2026-01-26 19:57:48,396 | INFO     | mean x: 1769452683.5
[2026-01-26 14:58:37] 2026-01-26 19:57:48,396 | INFO     | mean y: 2493770.1805555555
[2026-01-26 14:58:37] 2026-01-26 19:57:48,396 | INFO     | intersect: -4340305021.120019
[2026-01-26 14:58:37] 2026-01-26 19:57:48,396 | INFO     | chi2: 0.00010898181182671904
[2026-01-26 14:58:37] 2026-01-26 19:57:48,396 | INFO     | current memory leak: 2.45 B/s (using 144 data points, chi2=0.00)
[2026-01-26 14:58:37] 2026-01-26 19:57:48,397 | INFO     | could have reported an average CPU frequency of 2084 MHz (10 samples)
[2026-01-26 14:58:37] 2026-01-26 19:57:48,397 | INFO     | ..............................
[2026-01-26 14:58:37] 2026-01-26 19:57:48,397 | INFO     | . Timing measurements:
[2026-01-26 14:58:37] 2026-01-26 19:57:48,397 | INFO     | . get job = 0 s
[2026-01-26 14:58:37] 2026-01-26 19:57:48,397 | INFO     | . initial setup = 5 s
[2026-01-26 14:58:37] 2026-01-26 19:57:48,397 | INFO     | . payload setup = 4 s
[2026-01-26 14:58:37] 2026-01-26 19:57:48,397 | INFO     | . stage-in = 0 s
[2026-01-26 14:58:37] 2026-01-26 19:57:48,397 | INFO     | . payload execution = 12190 s
[2026-01-26 14:58:37] 2026-01-26 19:57:48,397 | INFO     | . stage-out = 2 s
[2026-01-26 14:58:37] 2026-01-26 19:57:48,398 | INFO     | . log creation = 0 s
[2026-01-26 14:58:37] 2026-01-26 19:57:48,398 | INFO     | ..............................
[2026-01-26 14:58:37] 2026-01-26 19:57:48,473 | INFO     | 
[2026-01-26 14:58:37] 2026-01-26 19:57:48,473 | INFO     | job summary report
[2026-01-26 14:58:37] 2026-01-26 19:57:48,473 | INFO     | --------------------------------------------------
[2026-01-26 14:58:37] 2026-01-26 19:57:48,473 | INFO     | PanDA job id: 6983773771
[2026-01-26 14:58:37] 2026-01-26 19:57:48,473 | INFO     | task id: 48318042
[2026-01-26 14:58:37] 2026-01-26 19:57:48,474 | INFO     | errors: (none)
[2026-01-26 14:58:37] 2026-01-26 19:57:48,474 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 14:58:37] 2026-01-26 19:57:48,474 | INFO     | pilot state: finished 
[2026-01-26 14:58:37] 2026-01-26 19:57:48,474 | INFO     | transexitcode: 0
[2026-01-26 14:58:37] 2026-01-26 19:57:48,474 | INFO     | exeerrorcode: 0
[2026-01-26 14:58:37] 2026-01-26 19:57:48,474 | INFO     | exeerrordiag: 
[2026-01-26 14:58:37] 2026-01-26 19:57:48,474 | INFO     | exitcode: 0
[2026-01-26 14:58:37] 2026-01-26 19:57:48,474 | INFO     | exitmsg: OK
[2026-01-26 14:58:37] 2026-01-26 19:57:48,474 | INFO     | cpuconsumptiontime: 93702 s
[2026-01-26 14:58:37] 2026-01-26 19:57:48,474 | INFO     | nevents: 400
[2026-01-26 14:58:37] 2026-01-26 19:57:48,475 | INFO     | neventsw: 0
[2026-01-26 14:58:37] 2026-01-26 19:57:48,475 | INFO     | pid: 13043
[2026-01-26 14:58:37] 2026-01-26 19:57:48,475 | INFO     | pgrp: 13043
[2026-01-26 14:58:37] 2026-01-26 19:57:48,475 | INFO     | corecount: 8
[2026-01-26 14:58:37] 2026-01-26 19:57:48,475 | INFO     | event service: False
[2026-01-26 14:58:37] 2026-01-26 19:57:48,475 | INFO     | sizes: {0: 2284046, 1: 2284252, 11: 2284280, 12198: 2313916, 12199: 2313915, 12202: 2322969, 12204: 2323153, 12205: 2323347}
[2026-01-26 14:58:37] 2026-01-26 19:57:48,475 | INFO     | --------------------------------------------------
[2026-01-26 14:58:37] 2026-01-26 19:57:48,475 | INFO     | 
[2026-01-26 14:58:37] 2026-01-26 19:57:48,475 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-26 14:58:37] 2026-01-26 19:57:48,492 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 14:58:37] 2026-01-26 19:57:48,492 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 14:58:37] 2026-01-26 19:57:48,493 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 14:58:37] 2026-01-26 19:57:48,493 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 14:58:37] 2026-01-26 19:57:48,493 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 14:58:37] 2026-01-26 19:57:48,493 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 14:58:37] 2026-01-26 19:57:48,493 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 14:58:37] 2026-01-26 19:57:48,493 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 14:58:37] 2026-01-26 19:57:48,493 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 14:58:37] 2026-01-26 19:57:48,493 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 14:58:37] 2026-01-26 19:57:48,493 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 14:58:37] 2026-01-26 19:57:48,494 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 14:58:37] 2026-01-26 19:57:48,494 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 14:58:37] 2026-01-26 19:57:48,494 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 14:58:37] 2026-01-26 19:57:48,494 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 14:58:37] 2026-01-26 19:57:48,494 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 14:58:37] 2026-01-26 19:57:48,494 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 14:58:37] 2026-01-26 19:57:48,494 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 14:58:37] 2026-01-26 19:57:48,494 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 14:58:37] 2026-01-26 19:57:48,494 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 14:58:37] 2026-01-26 19:57:48,495 | INFO     | job 6983773771 has completed (purged errors)
[2026-01-26 14:58:37] 2026-01-26 19:57:48,495 | INFO     | overall cleanup function is called
[2026-01-26 14:58:37] 2026-01-26 19:57:49,502 | INFO     | --- collectZombieJob: --- 10, [13043]
[2026-01-26 14:58:37] 2026-01-26 19:57:49,502 | INFO     | zombie collector waiting for pid 13043
[2026-01-26 14:58:37] 2026-01-26 19:57:49,502 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 14:58:37] 2026-01-26 19:57:49,502 | INFO     | collected zombie processes
[2026-01-26 14:58:37] 2026-01-26 19:57:49,502 | INFO     | will attempt to kill all subprocesses of pid=13043
[2026-01-26 14:58:37] 2026-01-26 19:57:49,671 | INFO     | process IDs to be killed: [13043] (in reverse order)
[2026-01-26 14:58:37] 2026-01-26 19:57:49,727 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 14:58:37] 2026-01-26 19:57:49,727 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 14:58:37] 2026-01-26 19:57:49,732 | INFO     | did not find any defunct processes belonging to 13043
[2026-01-26 14:58:37] 2026-01-26 19:57:49,737 | INFO     | did not find any defunct processes belonging to 13043
[2026-01-26 14:58:37] 2026-01-26 19:57:49,737 | INFO     | ready for new job
[2026-01-26 14:58:37] 2026-01-26 19:57:49,738 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 14:58:37] 2026-01-26 19:57:49,740 | INFO     | **************************************
[2026-01-26 14:58:37] 2026-01-26 19:57:49,740 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 14:58:37] 2026-01-26 19:57:49,740 | INFO     | **************************************
[2026-01-26 14:58:37] 2026-01-26 19:57:49,740 | INFO     | 
[2026-01-26 14:58:37] 2026-01-26 19:57:49,741 | INFO     | architecture information:
[2026-01-26 14:58:37] 2026-01-26 19:57:49,742 | INFO     | executing command: cat /etc/os-release
[2026-01-26 14:58:37] 2026-01-26 19:57:49,760 | INFO     | cat /etc/os-release:
[2026-01-26 14:58:37] NAME="CentOS Linux"
[2026-01-26 14:58:37] VERSION="7 (Core)"
[2026-01-26 14:58:37] ID="centos"
[2026-01-26 14:58:37] ID_LIKE="rhel fedora"
[2026-01-26 14:58:37] VERSION_ID="7"
[2026-01-26 14:58:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 14:58:37] ANSI_COLOR="0;31"
[2026-01-26 14:58:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 14:58:37] HOME_URL="https://www.centos.org/"
[2026-01-26 14:58:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 14:58:37] 
[2026-01-26 14:58:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 14:58:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 14:58:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 14:58:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 14:58:37] 
[2026-01-26 14:58:37] 2026-01-26 19:57:49,760 | INFO     | **************************************
[2026-01-26 14:58:37] 2026-01-26 19:57:50,263 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-26 14:58:37] 2026-01-26 19:57:50,276 | INFO     | sufficient remaining disk space (26856128512 B)
[2026-01-26 14:58:37] 2026-01-26 19:57:50,277 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 14:58:37] 2026-01-26 19:57:50,277 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 14:58:37] 2026-01-26 19:57:50,277 | INFO     | update_server=False
[2026-01-26 14:58:37] 2026-01-26 19:57:50,278 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 14:58:37] 2026-01-26 19:57:50,278 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 14:58:37] 2026-01-26 19:57:50,278 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:58:37] 2026-01-26 19:57:50,279 | INFO     | all payload control threads have been joined
[2026-01-26 14:58:37] 2026-01-26 19:57:50,380 | INFO     | all data control threads have been joined
[2026-01-26 14:58:37] 2026-01-26 19:57:50,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:58:37] 2026-01-26 19:57:50,970 | INFO     | aborting loop
[2026-01-26 14:58:37] 2026-01-26 19:57:51,283 | INFO     | [job] retrieve thread has finished
[2026-01-26 14:58:37] 2026-01-26 19:57:51,284 | INFO     | [payload] control thread has finished
[2026-01-26 14:58:37] 2026-01-26 19:57:51,284 | INFO     | [job] queue monitor thread has finished
[2026-01-26 14:58:37] 2026-01-26 19:57:51,361 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 14:58:37] 2026-01-26 19:57:51,385 | INFO     | [data] control thread has finished
[2026-01-26 14:58:37] 2026-01-26 19:57:51,458 | INFO     | [payload] validate_post thread has finished
[2026-01-26 14:58:37] 2026-01-26 19:57:51,494 | INFO     | all job control threads have been joined
[2026-01-26 14:58:37] 2026-01-26 19:57:51,541 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 14:58:37] 2026-01-26 19:57:51,640 | INFO     | [data] copytool_in thread has finished
[2026-01-26 14:58:37] 2026-01-26 19:57:51,648 | INFO     | [payload] failed_post thread has finished
[2026-01-26 14:58:37] 2026-01-26 19:57:51,975 | INFO     | [job] job monitor thread has finished
[2026-01-26 14:58:37] 2026-01-26 19:57:52,341 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 14:58:37] 2026-01-26 19:57:52,499 | INFO     | [job] control thread has finished
[2026-01-26 14:58:37] 2026-01-26 19:57:52,501 | INFO     | [job] validate thread has finished
[2026-01-26 14:58:37] 2026-01-26 19:57:52,533 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 14:58:37] 2026-01-26 19:57:52,549 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 14:58:37] 2026-01-26 19:57:53,547 | INFO     | [data] copytool_out thread has finished
[2026-01-26 14:58:37] 2026-01-26 19:57:54,284 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 14:58:37] 2026-01-26 19:58:21,459 | INFO     | PID=8566 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-26 14:58:37] 2026-01-26 19:58:21,459 | INFO     | .. there are 3 such processes running
[2026-01-26 14:58:37] 2026-01-26 19:58:21,459 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 14:58:37] 2026-01-26 19:58:21,459 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 14:58:37] 2026-01-26 19:58:21,459 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 14:58:37] 2026-01-26 19:58:31,846 | INFO     | [monitor] cgroup control has ended
[2026-01-26 14:58:37] 2026-01-26 19:58:32,546 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140095232886592)>', '<ExcThread(monitor, started 140094585435904)>']
[2026-01-26 14:58:37] 2026-01-26 19:58:33,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 14:58:37] 2026-01-26 19:58:33,513 | INFO     | [monitor] control thread has ended
[2026-01-26 14:58:37] 2026-01-26 19:58:37,571 | INFO     | all workflow threads have been joined
[2026-01-26 14:58:37] 2026-01-26 19:58:37,571 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 14:58:37] 2026-01-26 19:58:37,571 | INFO     | traces error code: 0
[2026-01-26 14:58:37] 2026-01-26 19:58:37,571 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 14:58:37] 2026-01-26 19:58:37,704 [wrapper] ==== pilot stdout END ====
[2026-01-26 14:58:37] 2026-01-26 19:58:37,706 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 14:58:37] 2026-01-26 19:58:37,709 [wrapper] pilotpid: 8566
[2026-01-26 14:58:37] 2026-01-26 19:58:37,711 [wrapper] Pilot exit status: 0
[2026-01-26 14:58:37] 2026-01-26 19:58:37,719 [wrapper] pandaids: 6983773771
[2026-01-26 14:58:37] 2026-01-26 19:58:37,757 [wrapper] cleanup supervisor_pilot 25418 8567
[2026-01-26 14:58:37] 2026-01-26 19:58:37,759 [wrapper] Test setup, not cleaning
[2026-01-26 14:58:37] 2026-01-26 19:58:37,761 [wrapper] apfmon messages muted
[2026-01-26 14:58:37] 2026-01-26 19:58:37,763 [wrapper] ==== wrapper stdout END ====
[2026-01-26 14:58:37] 2026-01-26 19:58:37,765 [wrapper] ==== wrapper stderr END ====
[2026-01-26 14:58:37]  *** Error codes and diagnostics ***
[2026-01-26 14:58:37]     "exeErrorCode": 0,
[2026-01-26 14:58:37]     "exeErrorDiag": "",
[2026-01-26 14:58:37]     "pilotErrorCode": 0,
[2026-01-26 14:58:37]     "pilotErrorDiag": "",
[2026-01-26 14:58:37]  *** Listing of results directory ***
[2026-01-26 14:58:37] total 674452
[2026-01-26 14:58:37] -rw-r--r-- 1 boincer umatlas    584422 Jan 26 00:14 pilot3.tar.gz
[2026-01-26 14:58:37] -rwx------ 1 boincer umatlas     36322 Jan 26 00:15 runpilot2-wrapper.sh
[2026-01-26 14:58:37] -rw-r--r-- 1 boincer umatlas      5111 Jan 26 00:15 queuedata.json
[2026-01-26 14:58:37] -rw-r--r-- 1 boincer umatlas       100 Jan 26 11:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 14:58:37] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 11:33 run_atlas
[2026-01-26 14:58:37] -rw-r--r-- 1 boincer umatlas       105 Jan 26 11:33 job.xml
[2026-01-26 14:58:37] -rw-r--r-- 2 boincer umatlas 492261357 Jan 26 11:33 EVNT.48318040._000042.pool.root.1
[2026-01-26 14:58:37] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 11:33 start_atlas.sh
[2026-01-26 14:58:37] drwxrwx--x 2 boincer umatlas      4096 Jan 26 11:33 shared
[2026-01-26 14:58:37] -rw-r--r-- 2 boincer umatlas    597765 Jan 26 11:33 input.tar.gz
[2026-01-26 14:58:37] -rw-r--r-- 1 boincer umatlas         0 Jan 26 11:33 boinc_lockfile
[2026-01-26 14:58:37] -rw-r--r-- 1 boincer umatlas      2534 Jan 26 11:33 pandaJob.out
[2026-01-26 14:58:37] -rw------- 1 boincer umatlas        57 Jan 26 11:34 setup.sh.local
[2026-01-26 14:58:37] -rw------- 1 boincer umatlas   1006276 Jan 26 11:34 agis_schedconf.cvmfs.json
[2026-01-26 14:58:37] -rw------- 1 boincer umatlas       434 Jan 26 11:34 workernode_map.json
[2026-01-26 14:58:37] drwx------ 5 boincer umatlas      4096 Jan 26 11:34 pilot3
[2026-01-26 14:58:37] -rw-r--r-- 1 boincer umatlas      5951 Jan 26 14:55 init_data.xml
[2026-01-26 14:58:37] -rw------- 1 boincer umatlas 190064121 Jan 26 14:57 HITS.48318042._002098.pool.root.1
[2026-01-26 14:58:37] -rw-r--r-- 1 boincer umatlas       531 Jan 26 14:57 boinc_task_state.xml
[2026-01-26 14:58:37] -rw------- 1 boincer umatlas        95 Jan 26 14:57 pilot_heartbeat.json
[2026-01-26 14:58:37] -rw------- 1 boincer umatlas      1054 Jan 26 14:57 memory_monitor_summary.json
[2026-01-26 14:58:37] -rw------- 1 boincer umatlas   1516246 Jan 26 14:57 agis_ddmendpoints.agis.ALL.json
[2026-01-26 14:58:37] -rw------- 1 boincer umatlas    460182 Jan 26 14:57 log.48318042._002098.job.log.tgz.1
[2026-01-26 14:58:37] -rw------- 1 boincer umatlas      6409 Jan 26 14:57 heartbeat.json
[2026-01-26 14:58:37] -rw-r--r-- 1 boincer umatlas        28 Jan 26 14:58 wrapper_checkpoint.txt
[2026-01-26 14:58:37] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 14:58 boinc_mmap_file
[2026-01-26 14:58:37] -rw------- 1 boincer umatlas      4816 Jan 26 14:58 pilotlog.txt
[2026-01-26 14:58:37] -rw------- 1 boincer umatlas   1721571 Jan 26 14:58 log.48318042._002098.job.log.1
[2026-01-26 14:58:37] -rw------- 1 boincer umatlas       357 Jan 26 14:58 output.list
[2026-01-26 14:58:37] -rw-r--r-- 1 boincer umatlas       620 Jan 26 14:58 runtime_log
[2026-01-26 14:58:37] -rw------- 1 boincer umatlas   2201600 Jan 26 14:58 result.tar.gz
[2026-01-26 14:58:37] -rw-r--r-- 1 boincer umatlas      9337 Jan 26 14:58 runtime_log.err
[2026-01-26 14:58:37] -rw------- 1 boincer umatlas       660 Jan 26 14:58 4HBMDmU7T48n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9Z2KDmX1E2Gn.diag
[2026-01-26 14:58:37] -rw-r--r-- 1 boincer umatlas     20903 Jan 26 14:58 stderr.txt
[2026-01-26 14:58:37] HITS file was successfully produced:
[2026-01-26 14:58:37] -rw------- 1 boincer umatlas 190064121 Jan 26 14:57 shared/HITS.pool.root.1
[2026-01-26 14:58:37]  *** Contents of shared directory: ***
[2026-01-26 14:58:37] total 669096
[2026-01-26 14:58:37] -rw-r--r-- 2 boincer umatlas 492261357 Jan 26 11:33 ATLAS.root_0
[2026-01-26 14:58:37] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 11:33 start_atlas.sh
[2026-01-26 14:58:37] -rw-r--r-- 2 boincer umatlas    597765 Jan 26 11:33 input.tar.gz
[2026-01-26 14:58:37] -rw------- 1 boincer umatlas 190064121 Jan 26 14:57 HITS.pool.root.1
[2026-01-26 14:58:37] -rw------- 1 boincer umatlas   2201600 Jan 26 14:58 result.tar.gz
14:58:39 (4747): run_atlas exited; CPU time 93869.334782
14:58:39 (4747): called boinc_finish(0)

</stderr_txt>
]]>

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