Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:07:49 (9191): wrapper (7.7.26015): starting
00:07:49 (9191): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 00:07:49] Arguments: --nthreads 8
[2026-01-27 00:07:49] Threads: 8
[2026-01-27 00:07:49] Checking for CVMFS
[2026-01-27 00:07:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 00:07:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 00:07:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 00:07:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 00:07:49] 2.11.2.0 14729 206507 145904 155573 1 188 11669822 18432000 1833 130560 0 139530861 99.981 7772350 29095 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-27 00:07:49] CVMFS is ok
[2026-01-27 00:07:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 00:07:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 00:07:49] Further information can be found at the LHC@home message board.
[2026-01-27 00:07:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 00:07:49] Checking for apptainer binary...
[2026-01-27 00:07:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 00:07:49] Running /usr/bin/apptainer --version
[2026-01-27 00:07:50] apptainer version 1.3.2-1.el7
[2026-01-27 00:07:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 00:07:50] c-206-30.aglt2.org
[2026-01-27 00:07:50] apptainer works
[2026-01-27 00:07:50] Set ATHENA_PROC_NUMBER=8
[2026-01-27 00:07:50] Set ATHENA_CORE_NUMBER=8
[2026-01-27 00:07:50] Starting ATLAS job with PandaID=6984225582
[2026-01-27 00:07:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 03:08:28]  *** The last 200 lines of the pilot log: ***
[2026-01-27 03:08:28] 2026-01-27 08:07:31,970 | INFO     | total number of processed events: 400 (read)
[2026-01-27 03:08:28] 2026-01-27 08:07:31,975 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6984225582/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 03:08:28] 2026-01-27 08:07:31,976 | INFO     | extracted standard info from prmon json
[2026-01-27 03:08:28] 2026-01-27 08:07:31,976 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 03:08:28] 2026-01-27 08:07:31,976 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 03:08:28] 2026-01-27 08:07:31,976 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 03:08:28] 2026-01-27 08:07:31,977 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 03:08:28] 2026-01-27 08:07:31,982 | INFO     | fitting pss+swap vs Time
[2026-01-27 03:08:28] 2026-01-27 08:07:31,982 | INFO     | sum of square deviations: 1719429448.0
[2026-01-27 03:08:28] 2026-01-27 08:07:31,984 | INFO     | sum of deviations: 27965139144.0
[2026-01-27 03:08:28] 2026-01-27 08:07:31,984 | INFO     | mean x: 1769495864.0
[2026-01-27 03:08:28] 2026-01-27 08:07:31,984 | INFO     | mean y: 2434902.350282486
[2026-01-27 03:08:28] 2026-01-27 08:07:31,984 | INFO     | intersect: -28776994290.89249
[2026-01-27 03:08:28] 2026-01-27 08:07:31,985 | INFO     | chi2: 2.306837477193369
[2026-01-27 03:08:28] 2026-01-27 08:07:31,985 | INFO     | sum of square deviations: 1577789583.0
[2026-01-27 03:08:28] 2026-01-27 08:07:31,987 | INFO     | sum of deviations: 38862704811.49999
[2026-01-27 03:08:28] 2026-01-27 08:07:31,987 | INFO     | mean x: 1769495711.5
[2026-01-27 03:08:28] 2026-01-27 08:07:31,987 | INFO     | mean y: 2446338.738372093
[2026-01-27 03:08:28] 2026-01-27 08:07:31,987 | INFO     | intersect: -43582192729.85387
[2026-01-27 03:08:28] 2026-01-27 08:07:31,987 | INFO     | chi2: 1.47629076549246
[2026-01-27 03:08:28] 2026-01-27 08:07:31,988 | INFO     | current chi2=1.47629076549246 (change=36.00369423126418 %)
[2026-01-27 03:08:28] 2026-01-27 08:07:31,988 | INFO     | sum of square deviations: 1444149868.0
[2026-01-27 03:08:28] 2026-01-27 08:07:31,989 | INFO     | sum of deviations: 37514290875.00002
[2026-01-27 03:08:28] 2026-01-27 08:07:31,990 | INFO     | mean x: 1769495559.0
[2026-01-27 03:08:28] 2026-01-27 08:07:31,990 | INFO     | mean y: 2444799.51497006
[2026-01-27 03:08:28] 2026-01-27 08:07:31,990 | INFO     | intersect: -45963263173.909
[2026-01-27 03:08:28] 2026-01-27 08:07:31,990 | INFO     | chi2: 1.4759628788220114
[2026-01-27 03:08:28] 2026-01-27 08:07:31,991 | INFO     | current chi2=1.4759628788220114 (change=0.02221016876300847 %)
[2026-01-27 03:08:28] 2026-01-27 08:07:31,991 | INFO     | right removable region: 166
[2026-01-27 03:08:28] 2026-01-27 08:07:31,991 | INFO     | sum of square deviations: 1577789583.0
[2026-01-27 03:08:28] 2026-01-27 08:07:31,993 | INFO     | sum of deviations: 237940199.0
[2026-01-27 03:08:28] 2026-01-27 08:07:31,993 | INFO     | mean x: 1769496016.5
[2026-01-27 03:08:28] 2026-01-27 08:07:31,993 | INFO     | mean y: 2464415.8139534886
[2026-01-27 03:08:28] 2026-01-27 08:07:31,993 | INFO     | intersect: -264386271.26889896
[2026-01-27 03:08:28] 2026-01-27 08:07:31,994 | INFO     | chi2: 0.8919315808242235
[2026-01-27 03:08:28] 2026-01-27 08:07:31,994 | INFO     | current chi2=0.8919315808242235 (change=61.33530906956659 %)
[2026-01-27 03:08:28] 2026-01-27 08:07:31,994 | INFO     | sum of square deviations: 1444149868.0
[2026-01-27 03:08:28] 2026-01-27 08:07:31,995 | INFO     | sum of deviations: -4960837566.0
[2026-01-27 03:08:28] 2026-01-27 08:07:31,996 | INFO     | mean x: 1769496169.0
[2026-01-27 03:08:28] 2026-01-27 08:07:31,996 | INFO     | mean y: 2470311.1796407187
[2026-01-27 03:08:28] 2026-01-27 08:07:31,996 | INFO     | intersect: 6080913596.44973
[2026-01-27 03:08:28] 2026-01-27 08:07:31,996 | INFO     | chi2: 0.8546290032156847
[2026-01-27 03:08:28] 2026-01-27 08:07:31,997 | INFO     | current chi2=0.8546290032156847 (change=4.182224108946558 %)
[2026-01-27 03:08:28] 2026-01-27 08:07:31,997 | INFO     | left removable region: 20
[2026-01-27 03:08:28] 2026-01-27 08:07:31,997 | INFO     | sum of square deviations: 964976232.5
[2026-01-27 03:08:28] 2026-01-27 08:07:31,998 | INFO     | sum of deviations: 3459456766.0000005
[2026-01-27 03:08:28] 2026-01-27 08:07:31,998 | INFO     | mean x: 1769496138.5
[2026-01-27 03:08:28] 2026-01-27 08:07:31,999 | INFO     | mean y: 2486355.02739726
[2026-01-27 03:08:28] 2026-01-27 08:07:31,999 | INFO     | intersect: -6341188424.283501
[2026-01-27 03:08:28] 2026-01-27 08:07:31,999 | INFO     | chi2: 0.00044764117702054864
[2026-01-27 03:08:28] 2026-01-27 08:07:32,000 | INFO     | current memory leak: 3.59 B/s (using 146 data points, chi2=0.00)
[2026-01-27 03:08:28] 2026-01-27 08:07:32,000 | INFO     | could have reported an average CPU frequency of 2483 MHz (9 samples)
[2026-01-27 03:08:28] 2026-01-27 08:07:32,000 | INFO     | ..............................
[2026-01-27 03:08:28] 2026-01-27 08:07:32,001 | INFO     | . Timing measurements:
[2026-01-27 03:08:28] 2026-01-27 08:07:32,001 | INFO     | . get job = 0 s
[2026-01-27 03:08:28] 2026-01-27 08:07:32,001 | INFO     | . initial setup = 6 s
[2026-01-27 03:08:28] 2026-01-27 08:07:32,001 | INFO     | . payload setup = 4 s
[2026-01-27 03:08:28] 2026-01-27 08:07:32,001 | INFO     | . stage-in = 0 s
[2026-01-27 03:08:28] 2026-01-27 08:07:32,001 | INFO     | . payload execution = 10752 s
[2026-01-27 03:08:28] 2026-01-27 08:07:32,002 | INFO     | . stage-out = 1 s
[2026-01-27 03:08:28] 2026-01-27 08:07:32,002 | INFO     | . log creation = 0 s
[2026-01-27 03:08:28] 2026-01-27 08:07:32,002 | INFO     | ..............................
[2026-01-27 03:08:28] 2026-01-27 08:07:32,177 | INFO     | time since job start (10767s) is within the limit (349056.0s)
[2026-01-27 03:08:28] 2026-01-27 08:07:32,390 | INFO     | 
[2026-01-27 03:08:28] 2026-01-27 08:07:32,390 | INFO     | job summary report
[2026-01-27 03:08:28] 2026-01-27 08:07:32,391 | INFO     | --------------------------------------------------
[2026-01-27 03:08:28] 2026-01-27 08:07:32,391 | INFO     | PanDA job id: 6984225582
[2026-01-27 03:08:28] 2026-01-27 08:07:32,391 | INFO     | task id: 48317931
[2026-01-27 03:08:28] 2026-01-27 08:07:32,391 | INFO     | errors: (none)
[2026-01-27 03:08:28] 2026-01-27 08:07:32,391 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 03:08:28] 2026-01-27 08:07:32,392 | INFO     | pilot state: finished 
[2026-01-27 03:08:28] 2026-01-27 08:07:32,392 | INFO     | transexitcode: 0
[2026-01-27 03:08:28] 2026-01-27 08:07:32,392 | INFO     | exeerrorcode: 0
[2026-01-27 03:08:28] 2026-01-27 08:07:32,392 | INFO     | exeerrordiag: 
[2026-01-27 03:08:28] 2026-01-27 08:07:32,392 | INFO     | exitcode: 0
[2026-01-27 03:08:28] 2026-01-27 08:07:32,392 | INFO     | exitmsg: OK
[2026-01-27 03:08:28] 2026-01-27 08:07:32,393 | INFO     | cpuconsumptiontime: 80530 s
[2026-01-27 03:08:28] 2026-01-27 08:07:32,393 | INFO     | nevents: 400
[2026-01-27 03:08:28] 2026-01-27 08:07:32,393 | INFO     | neventsw: 0
[2026-01-27 03:08:28] 2026-01-27 08:07:32,393 | INFO     | pid: 17415
[2026-01-27 03:08:28] 2026-01-27 08:07:32,393 | INFO     | pgrp: 17415
[2026-01-27 03:08:28] 2026-01-27 08:07:32,393 | INFO     | corecount: 8
[2026-01-27 03:08:28] 2026-01-27 08:07:32,394 | INFO     | event service: False
[2026-01-27 03:08:28] 2026-01-27 08:07:32,394 | INFO     | sizes: {0: 2283084, 1: 2284202, 2: 2284202, 10760: 2313295, 10762: 2322293, 10764: 2322349, 10765: 2322735}
[2026-01-27 03:08:28] 2026-01-27 08:07:32,394 | INFO     | --------------------------------------------------
[2026-01-27 03:08:28] 2026-01-27 08:07:32,394 | INFO     | 
[2026-01-27 03:08:28] 2026-01-27 08:07:32,394 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-27 03:08:28] 2026-01-27 08:07:32,411 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 03:08:28] 2026-01-27 08:07:32,412 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 03:08:28] 2026-01-27 08:07:32,412 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 03:08:28] 2026-01-27 08:07:32,412 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 03:08:28] 2026-01-27 08:07:32,412 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 03:08:28] 2026-01-27 08:07:32,412 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 03:08:28] 2026-01-27 08:07:32,413 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 03:08:28] 2026-01-27 08:07:32,413 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 03:08:28] 2026-01-27 08:07:32,413 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 03:08:28] 2026-01-27 08:07:32,413 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 03:08:28] 2026-01-27 08:07:32,413 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 03:08:28] 2026-01-27 08:07:32,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 03:08:28] 2026-01-27 08:07:32,414 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 03:08:28] 2026-01-27 08:07:32,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 03:08:28] 2026-01-27 08:07:32,414 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 03:08:28] 2026-01-27 08:07:32,414 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 03:08:28] 2026-01-27 08:07:32,414 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 03:08:28] 2026-01-27 08:07:32,415 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 03:08:28] 2026-01-27 08:07:32,415 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 03:08:28] 2026-01-27 08:07:32,415 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 03:08:28] 2026-01-27 08:07:32,415 | INFO     | job 6984225582 has completed (purged errors)
[2026-01-27 03:08:28] 2026-01-27 08:07:32,415 | INFO     | overall cleanup function is called
[2026-01-27 03:08:28] 2026-01-27 08:07:33,423 | INFO     | --- collectZombieJob: --- 10, [17415]
[2026-01-27 03:08:28] 2026-01-27 08:07:33,424 | INFO     | zombie collector waiting for pid 17415
[2026-01-27 03:08:28] 2026-01-27 08:07:33,424 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 03:08:28] 2026-01-27 08:07:33,424 | INFO     | collected zombie processes
[2026-01-27 03:08:28] 2026-01-27 08:07:33,424 | INFO     | will attempt to kill all subprocesses of pid=17415
[2026-01-27 03:08:28] 2026-01-27 08:07:33,583 | INFO     | process IDs to be killed: [17415] (in reverse order)
[2026-01-27 03:08:28] 2026-01-27 08:07:33,641 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 03:08:28] 2026-01-27 08:07:33,642 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 03:08:28] 2026-01-27 08:07:33,646 | INFO     | did not find any defunct processes belonging to 17415
[2026-01-27 03:08:28] 2026-01-27 08:07:33,650 | INFO     | did not find any defunct processes belonging to 17415
[2026-01-27 03:08:28] 2026-01-27 08:07:33,650 | INFO     | ready for new job
[2026-01-27 03:08:28] 2026-01-27 08:07:33,650 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 03:08:28] 2026-01-27 08:07:33,652 | INFO     | **************************************
[2026-01-27 03:08:28] 2026-01-27 08:07:33,652 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 03:08:28] 2026-01-27 08:07:33,652 | INFO     | **************************************
[2026-01-27 03:08:28] 2026-01-27 08:07:33,652 | INFO     | 
[2026-01-27 03:08:28] 2026-01-27 08:07:33,653 | INFO     | architecture information:
[2026-01-27 03:08:28] 2026-01-27 08:07:33,654 | INFO     | executing command: cat /etc/os-release
[2026-01-27 03:08:28] 2026-01-27 08:07:33,664 | INFO     | cat /etc/os-release:
[2026-01-27 03:08:28] NAME="CentOS Linux"
[2026-01-27 03:08:28] VERSION="7 (Core)"
[2026-01-27 03:08:28] ID="centos"
[2026-01-27 03:08:28] ID_LIKE="rhel fedora"
[2026-01-27 03:08:28] VERSION_ID="7"
[2026-01-27 03:08:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 03:08:28] ANSI_COLOR="0;31"
[2026-01-27 03:08:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 03:08:28] HOME_URL="https://www.centos.org/"
[2026-01-27 03:08:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 03:08:28] 
[2026-01-27 03:08:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 03:08:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 03:08:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 03:08:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 03:08:28] 
[2026-01-27 03:08:28] 2026-01-27 08:07:33,664 | INFO     | **************************************
[2026-01-27 03:08:28] 2026-01-27 08:07:34,167 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-27 03:08:28] 2026-01-27 08:07:34,179 | INFO     | sufficient remaining disk space (26500661248 B)
[2026-01-27 03:08:28] 2026-01-27 08:07:34,180 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 03:08:28] 2026-01-27 08:07:34,180 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 03:08:28] 2026-01-27 08:07:34,180 | INFO     | update_server=False
[2026-01-27 03:08:28] 2026-01-27 08:07:34,180 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 03:08:28] 2026-01-27 08:07:34,180 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-27 03:08:28] 2026-01-27 08:07:34,181 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 03:08:28] 2026-01-27 08:07:34,181 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 03:08:28] 2026-01-27 08:07:34,181 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 03:08:28] 2026-01-27 08:07:34,390 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 03:08:28] 2026-01-27 08:07:34,391 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 03:08:28] 2026-01-27 08:07:34,391 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 03:08:28] 2026-01-27 08:07:34,391 | INFO     | will abort loop
[2026-01-27 03:08:28] 2026-01-27 08:07:34,456 | INFO     | all data control threads have been joined
[2026-01-27 03:08:28] 2026-01-27 08:07:34,880 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 03:08:28] 2026-01-27 08:07:35,186 | INFO     | [job] retrieve thread has finished
[2026-01-27 03:08:28] 2026-01-27 08:07:35,274 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 03:08:28] 2026-01-27 08:07:35,287 | INFO     | [payload] failed_post thread has finished
[2026-01-27 03:08:28] 2026-01-27 08:07:35,397 | INFO     | [job] job monitor thread has finished
[2026-01-27 03:08:28] 2026-01-27 08:07:35,400 | INFO     | all payload control threads have been joined
[2026-01-27 03:08:28] 2026-01-27 08:07:35,408 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 03:08:28] 2026-01-27 08:07:35,460 | INFO     | [data] control thread has finished
[2026-01-27 03:08:28] 2026-01-27 08:07:35,566 | INFO     | [job] validate thread has finished
[2026-01-27 03:08:28] 2026-01-27 08:07:35,614 | INFO     | all job control threads have been joined
[2026-01-27 03:08:28] 2026-01-27 08:07:35,862 | INFO     | [data] copytool_in thread has finished
[2026-01-27 03:08:28] 2026-01-27 08:07:35,880 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 03:08:28] 2026-01-27 08:07:35,894 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 03:08:28] 2026-01-27 08:07:35,928 | INFO     | [payload] validate_post thread has finished
[2026-01-27 03:08:28] 2026-01-27 08:07:36,404 | INFO     | [payload] control thread has finished
[2026-01-27 03:08:28] 2026-01-27 08:07:36,620 | INFO     | [job] control thread has finished
[2026-01-27 03:08:28] 2026-01-27 08:07:36,886 | INFO     | [data] copytool_out thread has finished
[2026-01-27 03:08:28] 2026-01-27 08:07:37,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 03:08:28] 2026-01-27 08:07:37,325 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 03:08:28] 2026-01-27 08:07:38,128 | INFO     | [job] queue monitor thread has finished
[2026-01-27 03:08:28] 2026-01-27 08:07:41,333 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 03:08:28] 2026-01-27 08:07:59,418 [wrapper] supervise_pilot (15 min periods counter: 13)
[2026-01-27 03:08:28] 2026-01-27 08:08:22,620 | INFO     | [monitor] cgroup control has ended
[2026-01-27 03:08:28] 2026-01-27 08:08:23,487 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140400521836352)>', '<ExcThread(monitor, started 140399863658240)>']
[2026-01-27 03:08:28] 2026-01-27 08:08:24,420 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 03:08:28] 2026-01-27 08:08:24,421 | INFO     | [monitor] control thread has ended
[2026-01-27 03:08:28] 2026-01-27 08:08:28,513 | INFO     | all workflow threads have been joined
[2026-01-27 03:08:28] 2026-01-27 08:08:28,513 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 03:08:28] 2026-01-27 08:08:28,514 | INFO     | traces error code: 0
[2026-01-27 03:08:28] 2026-01-27 08:08:28,514 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 03:08:28] 2026-01-27 08:08:28,639 [wrapper] ==== pilot stdout END ====
[2026-01-27 03:08:28] 2026-01-27 08:08:28,641 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 03:08:28] 2026-01-27 08:08:28,643 [wrapper] pilotpid: 12898
[2026-01-27 03:08:28] 2026-01-27 08:08:28,645 [wrapper] Pilot exit status: 0
[2026-01-27 03:08:28] 2026-01-27 08:08:28,655 [wrapper] pandaids: 6984225582
[2026-01-27 03:08:28] 2026-01-27 08:08:28,685 [wrapper] cleanup supervisor_pilot 23582 12899
[2026-01-27 03:08:28] 2026-01-27 08:08:28,687 [wrapper] Test setup, not cleaning
[2026-01-27 03:08:28] 2026-01-27 08:08:28,689 [wrapper] apfmon messages muted
[2026-01-27 03:08:28] 2026-01-27 08:08:28,692 [wrapper] ==== wrapper stdout END ====
[2026-01-27 03:08:28] 2026-01-27 08:08:28,694 [wrapper] ==== wrapper stderr END ====
[2026-01-27 03:08:28]  *** Error codes and diagnostics ***
[2026-01-27 03:08:28]     "exeErrorCode": 0,
[2026-01-27 03:08:28]     "exeErrorDiag": "",
[2026-01-27 03:08:28]     "pilotErrorCode": 0,
[2026-01-27 03:08:28]     "pilotErrorDiag": "",
[2026-01-27 03:08:28]  *** Listing of results directory ***
[2026-01-27 03:08:28] total 670968
[2026-01-27 03:08:28] -rw-r--r-- 1 boincer umatlas    584422 Jan 26 04:48 pilot3.tar.gz
[2026-01-27 03:08:28] -rwx------ 1 boincer umatlas     36322 Jan 26 04:51 runpilot2-wrapper.sh
[2026-01-27 03:08:28] -rw-r--r-- 1 boincer umatlas      5111 Jan 26 04:54 queuedata.json
[2026-01-27 03:08:28] -rw-r--r-- 1 boincer umatlas       100 Jan 27 00:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 03:08:28] -rwxr-xr-x 1 boincer umatlas      7986 Jan 27 00:07 run_atlas
[2026-01-27 03:08:28] -rw-r--r-- 1 boincer umatlas       105 Jan 27 00:07 job.xml
[2026-01-27 03:08:28] -rw-r--r-- 2 boincer umatlas 499615977 Jan 27 00:07 EVNT.48317929._000065.pool.root.1
[2026-01-27 03:08:28] -rw-r--r-- 2 boincer umatlas     15845 Jan 27 00:07 start_atlas.sh
[2026-01-27 03:08:28] drwxrwx--x 2 boincer umatlas      4096 Jan 27 00:07 shared
[2026-01-27 03:08:28] -rw-r--r-- 2 boincer umatlas    597752 Jan 27 00:07 input.tar.gz
[2026-01-27 03:08:28] -rw-r--r-- 1 boincer umatlas         0 Jan 27 00:07 boinc_lockfile
[2026-01-27 03:08:28] -rw-r--r-- 1 boincer umatlas      2507 Jan 27 00:07 pandaJob.out
[2026-01-27 03:08:28] -rw------- 1 boincer umatlas        57 Jan 27 00:07 setup.sh.local
[2026-01-27 03:08:28] -rw------- 1 boincer umatlas   1006441 Jan 27 00:07 agis_schedconf.cvmfs.json
[2026-01-27 03:08:28] -rw------- 1 boincer umatlas   1516246 Jan 27 00:08 agis_ddmendpoints.agis.ALL.json
[2026-01-27 03:08:28] -rw------- 1 boincer umatlas       445 Jan 27 00:08 workernode_map.json
[2026-01-27 03:08:28] drwx------ 5 boincer umatlas      4096 Jan 27 00:08 pilot3
[2026-01-27 03:08:28] -rw-r--r-- 1 boincer umatlas      5952 Jan 27 03:04 init_data.xml
[2026-01-27 03:08:28] -rw------- 1 boincer umatlas        95 Jan 27 03:06 pilot_heartbeat.json
[2026-01-27 03:08:28] -rw------- 1 boincer umatlas 179652323 Jan 27 03:06 HITS.48317931._002001.pool.root.1
[2026-01-27 03:08:28] -rw------- 1 boincer umatlas      1066 Jan 27 03:07 memory_monitor_summary.json
[2026-01-27 03:08:28] -rw-r--r-- 1 boincer umatlas       531 Jan 27 03:07 boinc_task_state.xml
[2026-01-27 03:08:28] -rw------- 1 boincer umatlas    405143 Jan 27 03:07 log.48317931._002001.job.log.tgz.1
[2026-01-27 03:08:28] -rw------- 1 boincer umatlas      6418 Jan 27 03:07 heartbeat.json
[2026-01-27 03:08:28] -rw-r--r-- 1 boincer umatlas      8192 Jan 27 03:07 boinc_mmap_file
[2026-01-27 03:08:28] -rw-r--r-- 1 boincer umatlas        28 Jan 27 03:07 wrapper_checkpoint.txt
[2026-01-27 03:08:28] -rw------- 1 boincer umatlas      4734 Jan 27 03:08 pilotlog.txt
[2026-01-27 03:08:28] -rw------- 1 boincer umatlas   1524081 Jan 27 03:08 log.48317931._002001.job.log.1
[2026-01-27 03:08:28] -rw------- 1 boincer umatlas       357 Jan 27 03:08 output.list
[2026-01-27 03:08:28] -rw-r--r-- 1 boincer umatlas       620 Jan 27 03:08 runtime_log
[2026-01-27 03:08:28] -rw------- 1 boincer umatlas   1945600 Jan 27 03:08 result.tar.gz
[2026-01-27 03:08:28] -rw-r--r-- 1 boincer umatlas      9342 Jan 27 03:08 runtime_log.err
[2026-01-27 03:08:28] -rw------- 1 boincer umatlas       660 Jan 27 03:08 I7tLDmQRY48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0g9KDmvIK9zn.diag
[2026-01-27 03:08:28] -rw-r--r-- 1 boincer umatlas     20949 Jan 27 03:08 stderr.txt
[2026-01-27 03:08:28] HITS file was successfully produced:
[2026-01-27 03:08:28] -rw------- 1 boincer umatlas 179652323 Jan 27 03:06 shared/HITS.pool.root.1
[2026-01-27 03:08:28]  *** Contents of shared directory: ***
[2026-01-27 03:08:28] total 665860
[2026-01-27 03:08:28] -rw-r--r-- 2 boincer umatlas 499615977 Jan 27 00:07 ATLAS.root_0
[2026-01-27 03:08:28] -rw-r--r-- 2 boincer umatlas     15845 Jan 27 00:07 start_atlas.sh
[2026-01-27 03:08:28] -rw-r--r-- 2 boincer umatlas    597752 Jan 27 00:07 input.tar.gz
[2026-01-27 03:08:28] -rw------- 1 boincer umatlas 179652323 Jan 27 03:06 HITS.pool.root.1
[2026-01-27 03:08:28] -rw------- 1 boincer umatlas   1945600 Jan 27 03:08 result.tar.gz
03:08:30 (9191): run_atlas exited; CPU time 80645.745267
03:08:30 (9191): called boinc_finish(0)

</stderr_txt>
]]>

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