Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:31:51 (559517): wrapper (7.7.26015): starting
04:31:51 (559517): wrapper: running run_atlas (--nthreads 11)
[2026-01-27 04:31:51] Arguments: --nthreads 11
[2026-01-27 04:31:51] Threads: 11
[2026-01-27 04:31:51] Checking for CVMFS
[2026-01-27 04:31:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 04:31:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 04:31:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 04:31:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 04:31:52] 2.13.3.0 11048 119154 351860 155579 0 61 29641862 32935937 9378 16776704 0 279120530 99.446 420154823 38708 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-27 04:31:52] CVMFS is ok
[2026-01-27 04:31:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 04:31:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 04:31:52] Further information can be found at the LHC@home message board.
[2026-01-27 04:31:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 04:31:52] Checking for apptainer binary...
[2026-01-27 04:31:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 04:31:52] Running /usr/bin/apptainer --version
[2026-01-27 04:31:52] apptainer version 1.4.5-2.el9
[2026-01-27 04:31:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 04:31:53] c6-1-24-2.aglt2.org
[2026-01-27 04:31:53] apptainer works
[2026-01-27 04:31:53] Set ATHENA_PROC_NUMBER=11
[2026-01-27 04:31:53] Set ATHENA_CORE_NUMBER=11
[2026-01-27 04:31:53] Starting ATLAS job with PandaID=6984225835
[2026-01-27 04:31:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 08:42:52]  *** The last 200 lines of the pilot log: ***
[2026-01-27 08:42:52] 2026-01-27 13:42:14,733 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 08:42:52] 2026-01-27 13:42:14,734 | INFO     | time since job start (14995s) is within the limit (349056.0s)
[2026-01-27 08:42:52] 2026-01-27 13:42:14,803 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6984225835/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 08:42:52] 2026-01-27 13:42:14,840 | INFO     | extracted standard info from prmon json
[2026-01-27 08:42:52] 2026-01-27 13:42:14,840 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 08:42:52] 2026-01-27 13:42:14,841 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 08:42:52] 2026-01-27 13:42:14,841 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 08:42:52] 2026-01-27 13:42:14,841 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 08:42:52] 2026-01-27 13:42:14,882 | INFO     | fitting pss+swap vs Time
[2026-01-27 08:42:52] 2026-01-27 13:42:14,883 | INFO     | sum of square deviations: 4616451819.630104
[2026-01-27 08:42:52] 2026-01-27 13:42:14,884 | INFO     | sum of deviations: -8961057480.081322
[2026-01-27 08:42:52] 2026-01-27 13:42:14,884 | INFO     | mean x: 1769513831.6544716
[2026-01-27 08:42:52] 2026-01-27 13:42:14,884 | INFO     | mean y: 2637516.5284552844
[2026-01-27 08:42:52] 2026-01-27 13:42:14,884 | INFO     | intersect: 3437464907.0859923
[2026-01-27 08:42:52] 2026-01-27 13:42:14,885 | INFO     | chi2: 3.4445959696107122
[2026-01-27 08:42:52] 2026-01-27 13:42:14,885 | INFO     | sum of square deviations: 4340642300.622393
[2026-01-27 08:42:52] 2026-01-27 13:42:14,918 | INFO     | sum of deviations: 23927014926.13691
[2026-01-27 08:42:52] 2026-01-27 13:42:14,918 | INFO     | mean x: 1769513679.1493776
[2026-01-27 08:42:52] 2026-01-27 13:42:14,918 | INFO     | mean y: 2655476.9128630706
[2026-01-27 08:42:52] 2026-01-27 13:42:14,918 | INFO     | intersect: -9751472433.359703
[2026-01-27 08:42:52] 2026-01-27 13:42:14,918 | INFO     | chi2: 2.0388990102824516
[2026-01-27 08:42:52] 2026-01-27 13:42:14,918 | INFO     | current chi2=2.0388990102824516 (change=40.80876165825405 %)
[2026-01-27 08:42:52] 2026-01-27 13:42:14,919 | INFO     | sum of square deviations: 4075998066.9279733
[2026-01-27 08:42:52] 2026-01-27 13:42:14,920 | INFO     | sum of deviations: 23238004697.093224
[2026-01-27 08:42:52] 2026-01-27 13:42:14,920 | INFO     | mean x: 1769513526.631356
[2026-01-27 08:42:52] 2026-01-27 13:42:14,944 | INFO     | mean y: 2655079.7711864407
[2026-01-27 08:42:52] 2026-01-27 13:42:14,945 | INFO     | intersect: -10085662669.216616
[2026-01-27 08:42:52] 2026-01-27 13:42:14,945 | INFO     | chi2: 2.03989154722278
[2026-01-27 08:42:52] 2026-01-27 13:42:14,945 | INFO     | current chi2=2.03989154722278 (change=-0.04868004424558556 %)
[2026-01-27 08:42:52] 2026-01-27 13:42:14,945 | INFO     | right removable region: 235
[2026-01-27 08:42:52] 2026-01-27 13:42:14,945 | INFO     | sum of square deviations: 4340649012.008287
[2026-01-27 08:42:52] 2026-01-27 13:42:14,947 | INFO     | sum of deviations: -61124167314.510376
[2026-01-27 08:42:52] 2026-01-27 13:42:14,947 | INFO     | mean x: 1769513984.1576765
[2026-01-27 08:42:52] 2026-01-27 13:42:14,947 | INFO     | mean y: 2666188.3029045644
[2026-01-27 08:42:52] 2026-01-27 13:42:14,947 | INFO     | intersect: 24920614756.316074
[2026-01-27 08:42:52] 2026-01-27 13:42:14,947 | INFO     | chi2: 1.5908941749443373
[2026-01-27 08:42:52] 2026-01-27 13:42:14,947 | INFO     | current chi2=1.5908941749443373 (change=53.81478150181629 %)
[2026-01-27 08:42:52] 2026-01-27 13:42:14,948 | INFO     | sum of square deviations: 4076055716.881352
[2026-01-27 08:42:52] 2026-01-27 13:42:14,985 | INFO     | sum of deviations: -60581257994.322044
[2026-01-27 08:42:52] 2026-01-27 13:42:14,985 | INFO     | mean x: 1769514136.661017
[2026-01-27 08:42:52] 2026-01-27 13:42:14,986 | INFO     | mean y: 2665813.0084745763
[2026-01-27 08:42:52] 2026-01-27 13:42:14,986 | INFO     | intersect: 26302451655.897022
[2026-01-27 08:42:52] 2026-01-27 13:42:14,986 | INFO     | chi2: 1.5421626426979143
[2026-01-27 08:42:52] 2026-01-27 13:42:14,986 | INFO     | current chi2=1.5421626426979143 (change=3.063153603421048 %)
[2026-01-27 08:42:52] 2026-01-27 13:42:14,986 | INFO     | left removable region: 20
[2026-01-27 08:42:52] 2026-01-27 13:42:14,986 | INFO     | sum of square deviations: 3081865205.813955
[2026-01-27 08:42:52] 2026-01-27 13:42:14,987 | INFO     | sum of deviations: -16769868088.953497
[2026-01-27 08:42:52] 2026-01-27 13:42:14,988 | INFO     | mean x: 1769514106.139535
[2026-01-27 08:42:52] 2026-01-27 13:42:14,988 | INFO     | mean y: 2678164.465116279
[2026-01-27 08:42:52] 2026-01-27 13:42:14,988 | INFO     | intersect: 9631430935.845682
[2026-01-27 08:42:52] 2026-01-27 13:42:15,024 | INFO     | chi2: 0.07386789823724792
[2026-01-27 08:42:52] 2026-01-27 13:42:15,025 | INFO     | current memory leak: -5.44 B/s (using 215 data points, chi2=0.07)
[2026-01-27 08:42:52] 2026-01-27 13:42:15,025 | INFO     | could have reported an average CPU frequency of 2896 MHz (12 samples)
[2026-01-27 08:42:52] 2026-01-27 13:42:15,025 | INFO     | ..............................
[2026-01-27 08:42:52] 2026-01-27 13:42:15,025 | INFO     | . Timing measurements:
[2026-01-27 08:42:52] 2026-01-27 13:42:15,025 | INFO     | . get job = 0 s
[2026-01-27 08:42:52] 2026-01-27 13:42:15,026 | INFO     | . initial setup = 12 s
[2026-01-27 08:42:52] 2026-01-27 13:42:15,026 | INFO     | . payload setup = 11 s
[2026-01-27 08:42:52] 2026-01-27 13:42:15,026 | INFO     | . stage-in = 0 s
[2026-01-27 08:42:52] 2026-01-27 13:42:15,026 | INFO     | . payload execution = 14967 s
[2026-01-27 08:42:52] 2026-01-27 13:42:15,026 | INFO     | . stage-out = 5 s
[2026-01-27 08:42:52] 2026-01-27 13:42:15,026 | INFO     | . log creation = 1 s
[2026-01-27 08:42:52] 2026-01-27 13:42:15,026 | INFO     | ..............................
[2026-01-27 08:42:52] 2026-01-27 13:42:15,589 | INFO     | 
[2026-01-27 08:42:52] 2026-01-27 13:42:15,594 | INFO     | job summary report
[2026-01-27 08:42:52] 2026-01-27 13:42:15,594 | INFO     | --------------------------------------------------
[2026-01-27 08:42:52] 2026-01-27 13:42:15,594 | INFO     | PanDA job id: 6984225835
[2026-01-27 08:42:52] 2026-01-27 13:42:15,594 | INFO     | task id: 48318026
[2026-01-27 08:42:52] 2026-01-27 13:42:15,594 | INFO     | errors: (none)
[2026-01-27 08:42:52] 2026-01-27 13:42:15,594 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 08:42:52] 2026-01-27 13:42:15,594 | INFO     | pilot state: finished 
[2026-01-27 08:42:52] 2026-01-27 13:42:15,594 | INFO     | transexitcode: 0
[2026-01-27 08:42:52] 2026-01-27 13:42:15,595 | INFO     | exeerrorcode: 0
[2026-01-27 08:42:52] 2026-01-27 13:42:15,595 | INFO     | exeerrordiag: 
[2026-01-27 08:42:52] 2026-01-27 13:42:15,595 | INFO     | exitcode: 0
[2026-01-27 08:42:52] 2026-01-27 13:42:15,595 | INFO     | exitmsg: OK
[2026-01-27 08:42:52] 2026-01-27 13:42:15,595 | INFO     | cpuconsumptiontime: 43972 s
[2026-01-27 08:42:52] 2026-01-27 13:42:15,595 | INFO     | nevents: 400
[2026-01-27 08:42:52] 2026-01-27 13:42:15,595 | INFO     | neventsw: 0
[2026-01-27 08:42:52] 2026-01-27 13:42:15,595 | INFO     | pid: 568215
[2026-01-27 08:42:52] 2026-01-27 13:42:15,595 | INFO     | pgrp: 568215
[2026-01-27 08:42:52] 2026-01-27 13:42:15,595 | INFO     | corecount: 11
[2026-01-27 08:42:52] 2026-01-27 13:42:15,595 | INFO     | event service: False
[2026-01-27 08:42:52] 2026-01-27 13:42:15,595 | INFO     | sizes: {0: 2283854, 1: 2284258, 14984: 2315228, 14991: 2324226, 14992: 2324282, 14995: 2324476}
[2026-01-27 08:42:52] 2026-01-27 13:42:15,595 | INFO     | --------------------------------------------------
[2026-01-27 08:42:52] 2026-01-27 13:42:15,595 | INFO     | 
[2026-01-27 08:42:52] 2026-01-27 13:42:15,595 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-27 08:42:52] 2026-01-27 13:42:15,829 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 08:42:52] 2026-01-27 13:42:15,841 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 08:42:52] 2026-01-27 13:42:15,841 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 08:42:52] 2026-01-27 13:42:15,842 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 08:42:52] 2026-01-27 13:42:15,842 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 08:42:52] 2026-01-27 13:42:15,842 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 08:42:52] 2026-01-27 13:42:15,842 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 08:42:52] 2026-01-27 13:42:15,842 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 08:42:52] 2026-01-27 13:42:15,842 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 08:42:52] 2026-01-27 13:42:15,842 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 08:42:52] 2026-01-27 13:42:15,842 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 08:42:52] 2026-01-27 13:42:15,842 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 08:42:52] 2026-01-27 13:42:15,842 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 08:42:52] 2026-01-27 13:42:15,842 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 08:42:52] 2026-01-27 13:42:15,842 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 08:42:52] 2026-01-27 13:42:15,843 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 08:42:52] 2026-01-27 13:42:15,843 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 08:42:52] 2026-01-27 13:42:15,843 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 08:42:52] 2026-01-27 13:42:15,843 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 08:42:52] 2026-01-27 13:42:15,843 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 08:42:52] 2026-01-27 13:42:15,843 | INFO     | job 6984225835 has completed (purged errors)
[2026-01-27 08:42:52] 2026-01-27 13:42:15,843 | INFO     | overall cleanup function is called
[2026-01-27 08:42:52] 2026-01-27 13:42:16,914 | INFO     | --- collectZombieJob: --- 10, [568215]
[2026-01-27 08:42:52] 2026-01-27 13:42:16,914 | INFO     | zombie collector waiting for pid 568215
[2026-01-27 08:42:52] 2026-01-27 13:42:16,915 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 08:42:52] 2026-01-27 13:42:16,915 | INFO     | collected zombie processes
[2026-01-27 08:42:52] 2026-01-27 13:42:16,915 | INFO     | will attempt to kill all subprocesses of pid=568215
[2026-01-27 08:42:52] 2026-01-27 13:42:17,941 | INFO     | PID=563191 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 08:42:52] 2026-01-27 13:42:17,941 | INFO     | .. there are 9 such processes running
[2026-01-27 08:42:52] 2026-01-27 13:42:18,110 | INFO     | process IDs to be killed: [568215] (in reverse order)
[2026-01-27 08:42:52] 2026-01-27 13:42:18,946 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 08:42:52] 2026-01-27 13:42:18,946 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 08:42:52] 2026-01-27 13:42:19,024 | INFO     | did not find any defunct processes belonging to 568215
[2026-01-27 08:42:52] 2026-01-27 13:42:19,088 | INFO     | did not find any defunct processes belonging to 568215
[2026-01-27 08:42:52] 2026-01-27 13:42:19,088 | INFO     | ready for new job
[2026-01-27 08:42:52] 2026-01-27 13:42:19,088 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 08:42:52] 2026-01-27 13:42:19,090 | INFO     | **************************************
[2026-01-27 08:42:52] 2026-01-27 13:42:19,091 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 08:42:52] 2026-01-27 13:42:19,091 | INFO     | **************************************
[2026-01-27 08:42:52] 2026-01-27 13:42:19,091 | INFO     | 
[2026-01-27 08:42:52] 2026-01-27 13:42:19,093 | INFO     | architecture information:
[2026-01-27 08:42:52] 2026-01-27 13:42:19,094 | INFO     | executing command: cat /etc/os-release
[2026-01-27 08:42:52] 2026-01-27 13:42:19,245 | INFO     | cat /etc/os-release:
[2026-01-27 08:42:52] NAME="CentOS Linux"
[2026-01-27 08:42:52] VERSION="7 (Core)"
[2026-01-27 08:42:52] ID="centos"
[2026-01-27 08:42:52] ID_LIKE="rhel fedora"
[2026-01-27 08:42:52] VERSION_ID="7"
[2026-01-27 08:42:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 08:42:52] ANSI_COLOR="0;31"
[2026-01-27 08:42:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 08:42:52] HOME_URL="https://www.centos.org/"
[2026-01-27 08:42:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 08:42:52] 
[2026-01-27 08:42:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 08:42:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 08:42:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 08:42:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 08:42:52] 
[2026-01-27 08:42:52] 2026-01-27 13:42:19,246 | INFO     | **************************************
[2026-01-27 08:42:52] 2026-01-27 13:42:19,749 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-27 08:42:52] 2026-01-27 13:42:19,876 | INFO     | sufficient remaining disk space (74636591104 B)
[2026-01-27 08:42:52] 2026-01-27 13:42:19,876 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 08:42:52] 2026-01-27 13:42:19,876 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 08:42:52] 2026-01-27 13:42:19,876 | INFO     | update_server=False
[2026-01-27 08:42:52] 2026-01-27 13:42:19,876 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 08:42:52] 2026-01-27 13:42:20,223 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 08:42:52] 2026-01-27 13:42:20,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 08:42:52] 2026-01-27 13:42:20,635 | INFO     | all data control threads have been joined
[2026-01-27 08:42:52] 2026-01-27 13:42:20,701 | INFO     | all job control threads have been joined
[2026-01-27 08:42:52] 2026-01-27 13:42:20,800 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 08:42:52] 2026-01-27 13:42:20,800 | INFO     | aborting loop
[2026-01-27 08:42:52] 2026-01-27 13:42:20,882 | INFO     | [job] retrieve thread has finished
[2026-01-27 08:42:52] 2026-01-27 13:42:20,907 | INFO     | all payload control threads have been joined
[2026-01-27 08:42:52] 2026-01-27 13:42:20,962 | INFO     | [payload] failed_post thread has finished
[2026-01-27 08:42:52] 2026-01-27 13:42:21,027 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 08:42:52] 2026-01-27 13:42:21,044 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 08:42:52] 2026-01-27 13:42:21,202 | INFO     | [data] copytool_in thread has finished
[2026-01-27 08:42:52] 2026-01-27 13:42:21,533 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 08:42:52] 2026-01-27 13:42:21,641 | INFO     | [job] queue monitor thread has finished
[2026-01-27 08:42:52] 2026-01-27 13:42:21,645 | INFO     | [data] control thread has finished
[2026-01-27 08:42:52] 2026-01-27 13:42:21,676 | INFO     | [payload] validate_post thread has finished
[2026-01-27 08:42:52] 2026-01-27 13:42:21,707 | INFO     | [job] control thread has finished
[2026-01-27 08:42:52] 2026-01-27 13:42:21,806 | INFO     | [job] job monitor thread has finished
[2026-01-27 08:42:52] 2026-01-27 13:42:21,876 | INFO     | [job] validate thread has finished
[2026-01-27 08:42:52] 2026-01-27 13:42:21,877 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 08:42:52] 2026-01-27 13:42:21,913 | INFO     | [payload] control thread has finished
[2026-01-27 08:42:52] 2026-01-27 13:42:22,230 | INFO     | [data] copytool_out thread has finished
[2026-01-27 08:42:52] 2026-01-27 13:42:23,244 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 08:42:52] 2026-01-27 13:42:27,270 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 08:42:52] 2026-01-27 13:42:44,739 | INFO     | [monitor] cgroup control has ended
[2026-01-27 08:42:52] 2026-01-27 13:42:45,191 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139817251592000)>', '<ExcThread(monitor, started 139816620521216)>']
[2026-01-27 08:42:52] 2026-01-27 13:42:50,233 | INFO     | all workflow threads have been joined
[2026-01-27 08:42:52] 2026-01-27 13:42:50,233 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 08:42:52] 2026-01-27 13:42:50,234 | INFO     | traces error code: 0
[2026-01-27 08:42:52] 2026-01-27 13:42:50,234 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 08:42:52] 2026-01-27 13:42:50,771 | INFO     | PID=563191 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 08:42:52] 2026-01-27 13:42:50,771 | INFO     | .. there are 9 such processes running
[2026-01-27 08:42:52] 2026-01-27 13:42:50,772 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 08:42:52] 2026-01-27 13:42:50,772 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 08:42:52] 2026-01-27 13:42:50,772 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 08:42:52] 2026-01-27 13:42:50,772 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 08:42:52] 2026-01-27 13:42:50,772 | INFO     | [monitor] control thread has ended
[2026-01-27 08:42:52] 2026-01-27 13:42:51,876 [wrapper] ==== pilot stdout END ====
[2026-01-27 08:42:52] 2026-01-27 13:42:51,878 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 08:42:52] 2026-01-27 13:42:51,881 [wrapper] pilotpid: 563191
[2026-01-27 08:42:52] 2026-01-27 13:42:51,883 [wrapper] Pilot exit status: 0
[2026-01-27 08:42:52] 2026-01-27 13:42:51,905 [wrapper] pandaids: 6984225835
[2026-01-27 08:42:52] 2026-01-27 13:42:51,961 [wrapper] cleanup supervisor_pilot 1163008 563192
[2026-01-27 08:42:52] 2026-01-27 13:42:51,964 [wrapper] Test setup, not cleaning
[2026-01-27 08:42:52] 2026-01-27 13:42:52,003 [wrapper] apfmon messages muted
[2026-01-27 08:42:52] 2026-01-27 13:42:52,020 [wrapper] ==== wrapper stdout END ====
[2026-01-27 08:42:52] 2026-01-27 13:42:52,052 [wrapper] ==== wrapper stderr END ====
[2026-01-27 08:42:52]  *** Error codes and diagnostics ***
[2026-01-27 08:42:52]     "exeErrorCode": 0,
[2026-01-27 08:42:52]     "exeErrorDiag": "",
[2026-01-27 08:42:52]     "pilotErrorCode": 0,
[2026-01-27 08:42:52]     "pilotErrorDiag": "",
[2026-01-27 08:42:52]  *** Listing of results directory ***
[2026-01-27 08:42:52] total 728520
[2026-01-27 08:42:52] -rw-r--r--. 1 boincer umatlas    584422 Jan 26 04:48 pilot3.tar.gz
[2026-01-27 08:42:52] -rwx------. 1 boincer umatlas     36322 Jan 26 04:52 runpilot2-wrapper.sh
[2026-01-27 08:42:52] -rw-r--r--. 1 boincer umatlas      5111 Jan 26 04:54 queuedata.json
[2026-01-27 08:42:52] -rw-r--r--. 1 boincer umatlas       100 Jan 27 04:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 08:42:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 27 04:31 run_atlas
[2026-01-27 08:42:52] -rw-r--r--. 1 boincer umatlas       105 Jan 27 04:31 job.xml
[2026-01-27 08:42:52] -rw-r--r--. 2 boincer umatlas 536953983 Jan 27 04:31 EVNT.48318024._000011.pool.root.1
[2026-01-27 08:42:52] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 04:31 start_atlas.sh
[2026-01-27 08:42:52] drwxrwx--x. 2 boincer umatlas      4096 Jan 27 04:31 shared
[2026-01-27 08:42:52] -rw-r--r--. 2 boincer umatlas    597764 Jan 27 04:31 input.tar.gz
[2026-01-27 08:42:52] -rw-r--r--. 1 boincer umatlas         0 Jan 27 04:31 boinc_lockfile
[2026-01-27 08:42:52] -rw-r--r--. 1 boincer umatlas      2522 Jan 27 04:31 pandaJob.out
[2026-01-27 08:42:52] -rw-------. 1 boincer umatlas        57 Jan 27 04:31 setup.sh.local
[2026-01-27 08:42:52] -rw-------. 1 boincer umatlas   1002845 Jan 27 04:32 agis_schedconf.cvmfs.json
[2026-01-27 08:42:52] -rw-------. 1 boincer umatlas       441 Jan 27 04:32 workernode_map.json
[2026-01-27 08:42:52] drwx------. 5 boincer umatlas      4096 Jan 27 04:32 pilot3
[2026-01-27 08:42:52] -rw-------. 1 boincer umatlas 199968931 Jan 27 08:40 HITS.48318026._000549.pool.root.1
[2026-01-27 08:42:52] -rw-r--r--. 1 boincer umatlas       531 Jan 27 08:40 boinc_task_state.xml
[2026-01-27 08:42:52] -rw-r--r--. 1 boincer umatlas      6843 Jan 27 08:40 init_data.xml
[2026-01-27 08:42:52] -rw-------. 1 boincer umatlas      1039 Jan 27 08:42 memory_monitor_summary.json
[2026-01-27 08:42:52] -rw-------. 1 boincer umatlas   1516246 Jan 27 08:42 agis_ddmendpoints.agis.ALL.json
[2026-01-27 08:42:52] -rw-------. 1 boincer umatlas    541305 Jan 27 08:42 log.48318026._000549.job.log.tgz.1
[2026-01-27 08:42:52] -rw-------. 1 boincer umatlas        95 Jan 27 08:42 pilot_heartbeat.json
[2026-01-27 08:42:52] -rw-------. 1 boincer umatlas      6386 Jan 27 08:42 heartbeat.json
[2026-01-27 08:42:52] -rw-r--r--. 1 boincer umatlas      8192 Jan 27 08:42 boinc_mmap_file
[2026-01-27 08:42:52] -rw-r--r--. 1 boincer umatlas        28 Jan 27 08:42 wrapper_checkpoint.txt
[2026-01-27 08:42:52] -rw-------. 1 boincer umatlas       821 Jan 27 08:42 pilotlog.txt
[2026-01-27 08:42:52] -rw-------. 1 boincer umatlas   2026533 Jan 27 08:42 log.48318026._000549.job.log.1
[2026-01-27 08:42:52] -rw-------. 1 boincer umatlas       357 Jan 27 08:42 output.list
[2026-01-27 08:42:52] -rw-r--r--. 1 boincer umatlas       620 Jan 27 08:42 runtime_log
[2026-01-27 08:42:52] -rw-------. 1 boincer umatlas   2590720 Jan 27 08:42 result.tar.gz
[2026-01-27 08:42:52] -rw-------. 1 boincer umatlas       657 Jan 27 08:42 tTMLDmbRY48n9Rq4apOajLDm4fhM0noT9bVo0NGKDm062KDmi9QcUm.diag
[2026-01-27 08:42:52] -rw-r--r--. 1 boincer umatlas      9349 Jan 27 08:42 runtime_log.err
[2026-01-27 08:42:52] -rw-r--r--. 1 boincer umatlas     21259 Jan 27 08:42 stderr.txt
[2026-01-27 08:42:52] HITS file was successfully produced:
[2026-01-27 08:42:52] -rw-------. 1 boincer umatlas 199968931 Jan 27 08:40 shared/HITS.pool.root.1
[2026-01-27 08:42:52]  *** Contents of shared directory: ***
[2026-01-27 08:42:52] total 722796
[2026-01-27 08:42:52] -rw-r--r--. 2 boincer umatlas 536953983 Jan 27 04:31 ATLAS.root_0
[2026-01-27 08:42:52] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 04:31 start_atlas.sh
[2026-01-27 08:42:52] -rw-r--r--. 2 boincer umatlas    597764 Jan 27 04:31 input.tar.gz
[2026-01-27 08:42:52] -rw-------. 1 boincer umatlas 199968931 Jan 27 08:40 HITS.pool.root.1
[2026-01-27 08:42:52] -rw-------. 1 boincer umatlas   2590720 Jan 27 08:42 result.tar.gz
08:42:54 (559517): run_atlas exited; CPU time 44383.303353
08:42:54 (559517): called boinc_finish(0)

</stderr_txt>
]]>

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