Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:16:38 (2781538): wrapper (7.7.26015): starting
00:16:38 (2781538): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 00:16:38] Arguments: --nthreads 8
[2026-01-27 00:16:38] Threads: 8
[2026-01-27 00:16:38] Checking for CVMFS
[2026-01-27 00:16:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 00:16:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 00:16:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 00:16:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 00:16:41] 2.13.3.0 10299 118898 695036 155574 3 24 27100820 32935937 45896 16776704 0 1100116759 99.774 609946660 28889 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-27 00:16:41] CVMFS is ok
[2026-01-27 00:16:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 00:16:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 00:16:41] Further information can be found at the LHC@home message board.
[2026-01-27 00:16:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 00:16:41] Checking for apptainer binary...
[2026-01-27 00:16:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 00:16:41] Running /usr/bin/apptainer --version
[2026-01-27 00:16:41] apptainer version 1.4.5-2.el9
[2026-01-27 00:16:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 00:16:42] c-3-40.aglt2.org
[2026-01-27 00:16:42] apptainer works
[2026-01-27 00:16:42] Set ATHENA_PROC_NUMBER=8
[2026-01-27 00:16:42] Set ATHENA_CORE_NUMBER=8
[2026-01-27 00:16:42] Starting ATLAS job with PandaID=6984225978
[2026-01-27 00:16:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 09:32:50]  *** The last 200 lines of the pilot log: ***
[2026-01-27 09:32:50] 2026-01-27 14:32:11,943 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 09:32:50] 2026-01-27 14:32:11,943 | INFO     | log transfer has been attempted: DONE
[2026-01-27 09:32:50] 2026-01-27 14:32:11,943 | INFO     | job 6984225978 has finished - writing final server update
[2026-01-27 09:32:50] 2026-01-27 14:32:11,944 | INFO     | total number of processed events: 400 (read)
[2026-01-27 09:32:50] 2026-01-27 14:32:11,987 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6984225978/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 09:32:50] 2026-01-27 14:32:11,987 | INFO     | extracted standard info from prmon json
[2026-01-27 09:32:50] 2026-01-27 14:32:11,988 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 09:32:50] 2026-01-27 14:32:11,988 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 09:32:50] 2026-01-27 14:32:11,988 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 09:32:50] 2026-01-27 14:32:11,988 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 09:32:50] 2026-01-27 14:32:12,000 | INFO     | fitting pss+swap vs Time
[2026-01-27 09:32:50] 2026-01-27 14:32:12,001 | INFO     | sum of square deviations: 49918289550.98325
[2026-01-27 09:32:50] 2026-01-27 14:32:12,013 | INFO     | sum of deviations: 209424247473.0276
[2026-01-27 09:32:50] 2026-01-27 14:32:12,014 | INFO     | mean x: 1769507754.9944854
[2026-01-27 09:32:50] 2026-01-27 14:32:12,014 | INFO     | mean y: 2502351.0091911764
[2026-01-27 09:32:50] 2026-01-27 14:32:12,014 | INFO     | intersect: -7421186107.084366
[2026-01-27 09:32:50] 2026-01-27 14:32:12,015 | INFO     | chi2: 5.994172764588875
[2026-01-27 09:32:50] 2026-01-27 14:32:12,015 | INFO     | sum of square deviations: 48554480280.746506
[2026-01-27 09:32:50] 2026-01-27 14:32:12,038 | INFO     | sum of deviations: 275374797611.81464
[2026-01-27 09:32:50] 2026-01-27 14:32:12,038 | INFO     | mean x: 1769507602.4972172
[2026-01-27 09:32:50] 2026-01-27 14:32:12,038 | INFO     | mean y: 2509682.2096474953
[2026-01-27 09:32:50] 2026-01-27 14:32:12,038 | INFO     | intersect: -10033182082.849995
[2026-01-27 09:32:50] 2026-01-27 14:32:12,039 | INFO     | chi2: 4.646809977664895
[2026-01-27 09:32:50] 2026-01-27 14:32:12,039 | INFO     | current chi2=4.646809977664895 (change=22.477877095629424 %)
[2026-01-27 09:32:50] 2026-01-27 14:32:12,039 | INFO     | right removable region: 538
[2026-01-27 09:32:50] 2026-01-27 14:32:12,040 | INFO     | sum of square deviations: 48554349374.74954
[2026-01-27 09:32:50] 2026-01-27 14:32:12,066 | INFO     | sum of deviations: 46904408560.16515
[2026-01-27 09:32:50] 2026-01-27 14:32:12,066 | INFO     | mean x: 1769507907.4990723
[2026-01-27 09:32:50] 2026-01-27 14:32:12,066 | INFO     | mean y: 2520508.3302411875
[2026-01-27 09:32:50] 2026-01-27 14:32:12,066 | INFO     | intersect: -1706857187.2329493
[2026-01-27 09:32:50] 2026-01-27 14:32:12,067 | INFO     | chi2: 2.752936517480802
[2026-01-27 09:32:50] 2026-01-27 14:32:12,067 | INFO     | current chi2=2.752936517480802 (change=54.073120251988286 %)
[2026-01-27 09:32:50] 2026-01-27 14:32:12,068 | INFO     | sum of square deviations: 47215512070.99815
[2026-01-27 09:32:50] 2026-01-27 14:32:12,095 | INFO     | sum of deviations: -36350552321.397026
[2026-01-27 09:32:50] 2026-01-27 14:32:12,095 | INFO     | mean x: 1769508060.0018728
[2026-01-27 09:32:50] 2026-01-27 14:32:12,095 | INFO     | mean y: 2529974.397003745
[2026-01-27 09:32:50] 2026-01-27 14:32:12,095 | INFO     | intersect: 1364849104.2098854
[2026-01-27 09:32:50] 2026-01-27 14:32:12,096 | INFO     | chi2: 1.8401968630340502
[2026-01-27 09:32:50] 2026-01-27 14:32:12,096 | INFO     | current chi2=1.8401968630340502 (change=33.155129028619776 %)
[2026-01-27 09:32:50] 2026-01-27 14:32:12,096 | INFO     | sum of square deviations: 45901512930.238014
[2026-01-27 09:32:50] 2026-01-27 14:32:12,102 | INFO     | sum of deviations: -71646152914.53308
[2026-01-27 09:32:50] 2026-01-27 14:32:12,102 | INFO     | mean x: 1769508212.504726
[2026-01-27 09:32:50] 2026-01-27 14:32:12,102 | INFO     | mean y: 2534068.0132325143
[2026-01-27 09:32:50] 2026-01-27 14:32:12,102 | INFO     | intersect: 2764500894.0155907
[2026-01-27 09:32:50] 2026-01-27 14:32:12,103 | INFO     | chi2: 1.6828731816389348
[2026-01-27 09:32:50] 2026-01-27 14:32:12,103 | INFO     | current chi2=1.6828731816389348 (change=8.54928538111546 %)
[2026-01-27 09:32:50] 2026-01-27 14:32:12,103 | INFO     | left removable region: 30
[2026-01-27 09:32:50] 2026-01-27 14:32:12,104 | INFO     | sum of square deviations: 40648978299.968735
[2026-01-27 09:32:50] 2026-01-27 14:32:12,109 | INFO     | sum of deviations: -34180885749.874023
[2026-01-27 09:32:50] 2026-01-27 14:32:12,109 | INFO     | mean x: 1769508487.007874
[2026-01-27 09:32:50] 2026-01-27 14:32:12,109 | INFO     | mean y: 2545410.468503937
[2026-01-27 09:32:50] 2026-01-27 14:32:12,109 | INFO     | intersect: 1490488526.320326
[2026-01-27 09:32:50] 2026-01-27 14:32:12,115 | INFO     | chi2: 0.2448408597751268
[2026-01-27 09:32:50] 2026-01-27 14:32:12,115 | INFO     | current memory leak: -0.84 B/s (using 508 data points, chi2=0.24)
[2026-01-27 09:32:50] 2026-01-27 14:32:12,116 | INFO     | could have reported an average CPU frequency of 2899 MHz (22 samples)
[2026-01-27 09:32:50] 2026-01-27 14:32:12,117 | INFO     | ..............................
[2026-01-27 09:32:50] 2026-01-27 14:32:12,117 | INFO     | . Timing measurements:
[2026-01-27 09:32:50] 2026-01-27 14:32:12,117 | INFO     | . get job = 0 s
[2026-01-27 09:32:50] 2026-01-27 14:32:12,117 | INFO     | . initial setup = 39 s
[2026-01-27 09:32:50] 2026-01-27 14:32:12,117 | INFO     | . payload setup = 38 s
[2026-01-27 09:32:50] 2026-01-27 14:32:12,117 | INFO     | . stage-in = 0 s
[2026-01-27 09:32:50] 2026-01-27 14:32:12,117 | INFO     | . payload execution = 33153 s
[2026-01-27 09:32:50] 2026-01-27 14:32:12,117 | INFO     | . stage-out = 5 s
[2026-01-27 09:32:50] 2026-01-27 14:32:12,117 | INFO     | . log creation = 1 s
[2026-01-27 09:32:50] 2026-01-27 14:32:12,117 | INFO     | ..............................
[2026-01-27 09:32:50] 2026-01-27 14:32:12,562 | INFO     | 
[2026-01-27 09:32:50] 2026-01-27 14:32:12,562 | INFO     | job summary report
[2026-01-27 09:32:50] 2026-01-27 14:32:12,562 | INFO     | --------------------------------------------------
[2026-01-27 09:32:50] 2026-01-27 14:32:12,562 | INFO     | PanDA job id: 6984225978
[2026-01-27 09:32:50] 2026-01-27 14:32:12,562 | INFO     | task id: 48318026
[2026-01-27 09:32:50] 2026-01-27 14:32:12,562 | INFO     | errors: (none)
[2026-01-27 09:32:50] 2026-01-27 14:32:12,562 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 09:32:50] 2026-01-27 14:32:12,562 | INFO     | pilot state: finished 
[2026-01-27 09:32:50] 2026-01-27 14:32:12,562 | INFO     | transexitcode: 0
[2026-01-27 09:32:50] 2026-01-27 14:32:12,562 | INFO     | exeerrorcode: 0
[2026-01-27 09:32:50] 2026-01-27 14:32:12,563 | INFO     | exeerrordiag: 
[2026-01-27 09:32:50] 2026-01-27 14:32:12,563 | INFO     | exitcode: 0
[2026-01-27 09:32:50] 2026-01-27 14:32:12,563 | INFO     | exitmsg: OK
[2026-01-27 09:32:50] 2026-01-27 14:32:12,563 | INFO     | cpuconsumptiontime: 48629 s
[2026-01-27 09:32:50] 2026-01-27 14:32:12,563 | INFO     | nevents: 400
[2026-01-27 09:32:50] 2026-01-27 14:32:12,563 | INFO     | neventsw: 0
[2026-01-27 09:32:50] 2026-01-27 14:32:12,563 | INFO     | pid: 2805261
[2026-01-27 09:32:50] 2026-01-27 14:32:12,563 | INFO     | pgrp: 2805261
[2026-01-27 09:32:50] 2026-01-27 14:32:12,563 | INFO     | corecount: 8
[2026-01-27 09:32:50] 2026-01-27 14:32:12,563 | INFO     | event service: False
[2026-01-27 09:32:50] 2026-01-27 14:32:12,563 | INFO     | sizes: {0: 2283140, 1: 2283741, 2: 2283853, 3: 2284314, 4: 2284314, 33196: 2322953, 33197: 2323080, 33204: 2332190, 33206: 2332328}
[2026-01-27 09:32:50] 2026-01-27 14:32:12,563 | INFO     | --------------------------------------------------
[2026-01-27 09:32:50] 2026-01-27 14:32:12,563 | INFO     | 
[2026-01-27 09:32:50] 2026-01-27 14:32:12,563 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-27 09:32:50] 2026-01-27 14:32:12,695 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 09:32:50] 2026-01-27 14:32:12,695 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 09:32:50] 2026-01-27 14:32:12,696 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 09:32:50] 2026-01-27 14:32:12,696 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 09:32:50] 2026-01-27 14:32:12,696 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 09:32:50] 2026-01-27 14:32:12,696 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 09:32:50] 2026-01-27 14:32:12,696 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 09:32:50] 2026-01-27 14:32:12,696 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 09:32:50] 2026-01-27 14:32:12,696 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 09:32:50] 2026-01-27 14:32:12,696 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 09:32:50] 2026-01-27 14:32:12,696 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 09:32:50] 2026-01-27 14:32:12,696 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 09:32:50] 2026-01-27 14:32:12,696 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 09:32:50] 2026-01-27 14:32:12,696 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 09:32:50] 2026-01-27 14:32:12,696 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 09:32:50] 2026-01-27 14:32:12,696 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 09:32:50] 2026-01-27 14:32:12,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 09:32:50] 2026-01-27 14:32:12,697 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 09:32:50] 2026-01-27 14:32:12,697 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 09:32:50] 2026-01-27 14:32:12,697 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 09:32:50] 2026-01-27 14:32:12,697 | INFO     | job 6984225978 has completed (purged errors)
[2026-01-27 09:32:50] 2026-01-27 14:32:12,697 | INFO     | overall cleanup function is called
[2026-01-27 09:32:50] 2026-01-27 14:32:13,732 | INFO     | --- collectZombieJob: --- 10, [2805261]
[2026-01-27 09:32:50] 2026-01-27 14:32:13,732 | INFO     | zombie collector waiting for pid 2805261
[2026-01-27 09:32:50] 2026-01-27 14:32:13,732 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 09:32:50] 2026-01-27 14:32:13,732 | INFO     | collected zombie processes
[2026-01-27 09:32:50] 2026-01-27 14:32:13,732 | INFO     | will attempt to kill all subprocesses of pid=2805261
[2026-01-27 09:32:50] 2026-01-27 14:32:16,812 | INFO     | process IDs to be killed: [2805261] (in reverse order)
[2026-01-27 09:32:50] 2026-01-27 14:32:17,702 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 09:32:50] 2026-01-27 14:32:17,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 09:32:50] 2026-01-27 14:32:17,760 | INFO     | did not find any defunct processes belonging to 2805261
[2026-01-27 09:32:50] 2026-01-27 14:32:17,787 | INFO     | did not find any defunct processes belonging to 2805261
[2026-01-27 09:32:50] 2026-01-27 14:32:17,788 | INFO     | ready for new job
[2026-01-27 09:32:50] 2026-01-27 14:32:17,788 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 09:32:50] 2026-01-27 14:32:17,805 | INFO     | **************************************
[2026-01-27 09:32:50] 2026-01-27 14:32:17,805 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 09:32:50] 2026-01-27 14:32:17,805 | INFO     | **************************************
[2026-01-27 09:32:50] 2026-01-27 14:32:17,805 | INFO     | 
[2026-01-27 09:32:50] 2026-01-27 14:32:17,836 | INFO     | architecture information:
[2026-01-27 09:32:50] 2026-01-27 14:32:17,849 | INFO     | executing command: cat /etc/os-release
[2026-01-27 09:32:50] 2026-01-27 14:32:18,000 | INFO     | cat /etc/os-release:
[2026-01-27 09:32:50] NAME="CentOS Linux"
[2026-01-27 09:32:50] VERSION="7 (Core)"
[2026-01-27 09:32:50] ID="centos"
[2026-01-27 09:32:50] ID_LIKE="rhel fedora"
[2026-01-27 09:32:50] VERSION_ID="7"
[2026-01-27 09:32:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 09:32:50] ANSI_COLOR="0;31"
[2026-01-27 09:32:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 09:32:50] HOME_URL="https://www.centos.org/"
[2026-01-27 09:32:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 09:32:50] 
[2026-01-27 09:32:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 09:32:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 09:32:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 09:32:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 09:32:50] 
[2026-01-27 09:32:50] 2026-01-27 14:32:18,000 | INFO     | **************************************
[2026-01-27 09:32:50] 2026-01-27 14:32:18,504 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-27 09:32:50] 2026-01-27 14:32:18,647 | INFO     | sufficient remaining disk space (75146199040 B)
[2026-01-27 09:32:50] 2026-01-27 14:32:18,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 09:32:50] 2026-01-27 14:32:18,647 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 09:32:50] 2026-01-27 14:32:18,648 | INFO     | update_server=False
[2026-01-27 09:32:50] 2026-01-27 14:32:18,648 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 09:32:50] 2026-01-27 14:32:18,649 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 09:32:50] 2026-01-27 14:32:18,649 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 09:32:50] 2026-01-27 14:32:18,649 | INFO     | aborting loop
[2026-01-27 09:32:50] 2026-01-27 14:32:19,654 | INFO     | [job] retrieve thread has finished
[2026-01-27 09:32:50] 2026-01-27 14:32:19,655 | INFO     | [job] job monitor thread has finished
[2026-01-27 09:32:50] 2026-01-27 14:32:19,661 | INFO     | all data control threads have been joined
[2026-01-27 09:32:50] 2026-01-27 14:32:19,802 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 09:32:50] 2026-01-27 14:32:19,822 | INFO     | all payload control threads have been joined
[2026-01-27 09:32:50] 2026-01-27 14:32:20,090 | INFO     | all job control threads have been joined
[2026-01-27 09:32:50] 2026-01-27 14:32:20,103 | INFO     | [payload] validate_post thread has finished
[2026-01-27 09:32:50] 2026-01-27 14:32:20,436 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 09:32:50] 2026-01-27 14:32:20,436 | INFO     | [job] validate thread has finished
[2026-01-27 09:32:50] 2026-01-27 14:32:20,656 | INFO     | [data] copytool_out thread has finished
[2026-01-27 09:32:50] 2026-01-27 14:32:20,668 | INFO     | [data] control thread has finished
[2026-01-27 09:32:50] 2026-01-27 14:32:20,828 | INFO     | [payload] control thread has finished
[2026-01-27 09:32:50] 2026-01-27 14:32:20,880 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 09:32:50] 2026-01-27 14:32:20,912 | INFO     | [data] copytool_in thread has finished
[2026-01-27 09:32:50] 2026-01-27 14:32:20,934 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 09:32:50] 2026-01-27 14:32:21,096 | INFO     | [job] control thread has finished
[2026-01-27 09:32:50] 2026-01-27 14:32:21,209 | INFO     | [payload] failed_post thread has finished
[2026-01-27 09:32:50] 2026-01-27 14:32:21,457 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 09:32:50] 2026-01-27 14:32:21,629 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 09:32:50] 2026-01-27 14:32:22,635 | INFO     | [job] queue monitor thread has finished
[2026-01-27 09:32:50] 2026-01-27 14:32:25,467 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 09:32:50] 2026-01-27 14:32:43,365 | INFO     | [monitor] cgroup control has ended
[2026-01-27 09:32:50] 2026-01-27 14:32:43,573 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139872767752000)>', '<ExcThread(monitor, started 139872404739840)>']
[2026-01-27 09:32:50] 2026-01-27 14:32:48,599 | INFO     | all workflow threads have been joined
[2026-01-27 09:32:50] 2026-01-27 14:32:48,599 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 09:32:50] 2026-01-27 14:32:48,599 | INFO     | traces error code: 0
[2026-01-27 09:32:50] 2026-01-27 14:32:48,599 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 09:32:50] 2026-01-27 14:32:48,871 | INFO     | PID=2791471 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 09:32:50] 2026-01-27 14:32:48,871 | INFO     | .. there are 64 such processes running
[2026-01-27 09:32:50] 2026-01-27 14:32:48,872 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 09:32:50] 2026-01-27 14:32:48,872 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 09:32:50] 2026-01-27 14:32:48,872 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 09:32:50] 2026-01-27 14:32:48,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 09:32:50] 2026-01-27 14:32:48,872 | INFO     | [monitor] control thread has ended
[2026-01-27 09:32:50] 2026-01-27 14:32:49,111 [wrapper] ==== pilot stdout END ====
[2026-01-27 09:32:50] 2026-01-27 14:32:49,126 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 09:32:50] 2026-01-27 14:32:49,170 [wrapper] pilotpid: 2791471
[2026-01-27 09:32:50] 2026-01-27 14:32:49,192 [wrapper] Pilot exit status: 0
[2026-01-27 09:32:50] 2026-01-27 14:32:49,319 [wrapper] pandaids: 6984225978
[2026-01-27 09:32:50] 2026-01-27 14:32:49,886 [wrapper] cleanup supervisor_pilot 3013101 2791472
[2026-01-27 09:32:50] 2026-01-27 14:32:49,934 [wrapper] Test setup, not cleaning
[2026-01-27 09:32:50] 2026-01-27 14:32:49,952 [wrapper] apfmon messages muted
[2026-01-27 09:32:50] 2026-01-27 14:32:49,976 [wrapper] ==== wrapper stdout END ====
[2026-01-27 09:32:50] 2026-01-27 14:32:49,997 [wrapper] ==== wrapper stderr END ====
[2026-01-27 09:32:50]  *** Error codes and diagnostics ***
[2026-01-27 09:32:50]     "exeErrorCode": 0,
[2026-01-27 09:32:50]     "exeErrorDiag": "",
[2026-01-27 09:32:50]     "pilotErrorCode": 0,
[2026-01-27 09:32:50]     "pilotErrorDiag": "",
[2026-01-27 09:32:50]  *** Listing of results directory ***
[2026-01-27 09:32:50] total 738036
[2026-01-27 09:32:50] -rw-r--r--. 1 boincer umatlas    584422 Jan 26 04:48 pilot3.tar.gz
[2026-01-27 09:32:50] -rwx------. 1 boincer umatlas     36322 Jan 26 04:49 runpilot2-wrapper.sh
[2026-01-27 09:32:50] -rw-r--r--. 1 boincer umatlas      5111 Jan 26 04:50 queuedata.json
[2026-01-27 09:32:50] -rw-r--r--. 1 boincer umatlas       100 Jan 27 00:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 09:32:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 27 00:16 run_atlas
[2026-01-27 09:32:50] -rw-r--r--. 1 boincer umatlas       105 Jan 27 00:16 job.xml
[2026-01-27 09:32:50] -rw-r--r--. 2 boincer umatlas 538728583 Jan 27 00:16 EVNT.48318024._000014.pool.root.1
[2026-01-27 09:32:50] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 00:16 start_atlas.sh
[2026-01-27 09:32:50] drwxrwx--x. 2 boincer umatlas      4096 Jan 27 00:16 shared
[2026-01-27 09:32:50] -rw-r--r--. 2 boincer umatlas    597763 Jan 27 00:16 input.tar.gz
[2026-01-27 09:32:50] -rw-r--r--. 1 boincer umatlas         0 Jan 27 00:16 boinc_lockfile
[2026-01-27 09:32:50] -rw-r--r--. 1 boincer umatlas      2522 Jan 27 00:16 pandaJob.out
[2026-01-27 09:32:50] -rw-------. 1 boincer umatlas        57 Jan 27 00:16 setup.sh.local
[2026-01-27 09:32:50] -rw-------. 1 boincer umatlas   1004335 Jan 27 00:18 agis_schedconf.cvmfs.json
[2026-01-27 09:32:50] -rw-------. 1 boincer umatlas       433 Jan 27 00:18 workernode_map.json
[2026-01-27 09:32:50] drwx------. 5 boincer umatlas      4096 Jan 27 00:18 pilot3
[2026-01-27 09:32:50] -rw-r--r--. 1 boincer umatlas      6840 Jan 27 09:27 init_data.xml
[2026-01-27 09:32:50] -rw-------. 1 boincer umatlas 204470321 Jan 27 09:30 HITS.48318026._000691.pool.root.1
[2026-01-27 09:32:50] -rw-r--r--. 1 boincer umatlas       531 Jan 27 09:30 boinc_task_state.xml
[2026-01-27 09:32:50] -rw-------. 1 boincer umatlas      1043 Jan 27 09:31 memory_monitor_summary.json
[2026-01-27 09:32:50] -rw-------. 1 boincer umatlas   1516246 Jan 27 09:32 agis_ddmendpoints.agis.ALL.json
[2026-01-27 09:32:50] -rw-------. 1 boincer umatlas    673175 Jan 27 09:32 log.48318026._000691.job.log.tgz.1
[2026-01-27 09:32:50] -rw-------. 1 boincer umatlas      6375 Jan 27 09:32 heartbeat.json
[2026-01-27 09:32:50] -rw-r--r--. 1 boincer umatlas      8192 Jan 27 09:32 boinc_mmap_file
[2026-01-27 09:32:50] -rw-r--r--. 1 boincer umatlas        27 Jan 27 09:32 wrapper_checkpoint.txt
[2026-01-27 09:32:50] -rw-------. 1 boincer umatlas        95 Jan 27 09:32 pilot_heartbeat.json
[2026-01-27 09:32:50] -rw-------. 1 boincer umatlas       823 Jan 27 09:32 pilotlog.txt
[2026-01-27 09:32:50] -rw-------. 1 boincer umatlas   3629679 Jan 27 09:32 log.48318026._000691.job.log.1
[2026-01-27 09:32:50] -rw-------. 1 boincer umatlas       357 Jan 27 09:32 output.list
[2026-01-27 09:32:50] -rw-r--r--. 1 boincer umatlas       620 Jan 27 09:32 runtime_log
[2026-01-27 09:32:50] -rw-------. 1 boincer umatlas   4321280 Jan 27 09:32 result.tar.gz
[2026-01-27 09:32:50] -rw-------. 1 boincer umatlas       657 Jan 27 09:32 ZEPKDmUPY48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmle9KDmzC972m.diag
[2026-01-27 09:32:50] -rw-r--r--. 1 boincer umatlas      9332 Jan 27 09:32 runtime_log.err
[2026-01-27 09:32:50] -rw-r--r--. 1 boincer umatlas     21173 Jan 27 09:32 stderr.txt
[2026-01-27 09:32:50] HITS file was successfully produced:
[2026-01-27 09:32:50] -rw-------. 1 boincer umatlas 204470321 Jan 27 09:30 shared/HITS.pool.root.1
[2026-01-27 09:32:50]  *** Contents of shared directory: ***
[2026-01-27 09:32:50] total 730612
[2026-01-27 09:32:50] -rw-r--r--. 2 boincer umatlas 538728583 Jan 27 00:16 ATLAS.root_0
[2026-01-27 09:32:50] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 00:16 start_atlas.sh
[2026-01-27 09:32:50] -rw-r--r--. 2 boincer umatlas    597763 Jan 27 00:16 input.tar.gz
[2026-01-27 09:32:50] -rw-------. 1 boincer umatlas 204470321 Jan 27 09:30 HITS.pool.root.1
[2026-01-27 09:32:50] -rw-------. 1 boincer umatlas   4321280 Jan 27 09:32 result.tar.gz
09:32:51 (2781538): run_atlas exited; CPU time 50308.710144
09:32:51 (2781538): called boinc_finish(0)

</stderr_txt>
]]>

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