Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:57:04 (3091): wrapper (7.7.26015): starting
11:57:04 (3091): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 11:57:04] Arguments: --nthreads 12
[2026-01-26 11:57:04] Threads: 12
[2026-01-26 11:57:04] Checking for CVMFS
[2026-01-26 11:57:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 11:57:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 11:57:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 11:57:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 11:57:05] 2.11.2.0 10903 94255 98852 155554 2 49 13228654 20275201 1 130560 0 34101292 99.843 7374062 33595 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 11:57:05] CVMFS is ok
[2026-01-26 11:57:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 11:57:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 11:57:05] Further information can be found at the LHC@home message board.
[2026-01-26 11:57:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 11:57:05] Checking for apptainer binary...
[2026-01-26 11:57:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 11:57:05] Running /usr/bin/apptainer --version
[2026-01-26 11:57:05] apptainer version 1.3.2-1.el7
[2026-01-26 11:57:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 11:57:06] c-205-22.aglt2.org
[2026-01-26 11:57:06] apptainer works
[2026-01-26 11:57:06] Set ATHENA_PROC_NUMBER=12
[2026-01-26 11:57:06] Set ATHENA_CORE_NUMBER=12
[2026-01-26 11:57:06] Starting ATLAS job with PandaID=6983773877
[2026-01-26 11:57:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 13:14:40]  *** The last 200 lines of the pilot log: ***
[2026-01-26 13:14:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/fc/log.48318042._002204.job.log.tgz.1
[2026-01-26 13:14:40]  workdir=None
[2026-01-26 13:14:40] ]
[2026-01-26 13:14:40] 2026-01-26 18:13:54,193 | INFO     | transferring file log.48318042._002204.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6983773877/log.48318042._002204.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 13:14:40] 2026-01-26 18:13:54,193 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6983773877/log.48318042._002204.job.log.tgz.1 /tmp/boinchome/slots/0/log.48318042._002204.job
[2026-01-26 13:14:40] 2026-01-26 18:13:54,215 | INFO     | adding to output.list: log.48318042._002204.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/fc/log.48318042._002204.job.log.tg
[2026-01-26 13:14:40] 2026-01-26 18:13:54,216 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 13:14:40] 2026-01-26 18:13:54,216 | INFO     | summary of transferred files:
[2026-01-26 13:14:40] 2026-01-26 18:13:54,216 | INFO     |  -- lfn=log.48318042._002204.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 13:14:40] 2026-01-26 18:13:54,216 | INFO     | stage-out finished correctly
[2026-01-26 13:14:40] 2026-01-26 18:13:55,572 | INFO     | time since job start (4588s) is within the limit (349056.0s)
[2026-01-26 13:14:40] 2026-01-26 18:13:55,826 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 13:14:40] 2026-01-26 18:13:57,578 | INFO     | time since job start (4590s) is within the limit (349056.0s)
[2026-01-26 13:14:40] 2026-01-26 18:13:57,775 | WARNING  | process 11447 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 13:14:40] 2026-01-26 18:13:57,775 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983773877/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 13:14:40] 2026-01-26 18:13:57,776 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983773877/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 13:14:40] 2026-01-26 18:13:57,776 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 13:14:40] 2026-01-26 18:13:57,776 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 13:14:40] 2026-01-26 18:13:57,777 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 5200918 B
[2026-01-26 13:14:40] 2026-01-26 18:13:57,777 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15355 B
[2026-01-26 13:14:40] 2026-01-26 18:13:57,777 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 13:14:40] 2026-01-26 18:13:57,794 | INFO     | sufficient remaining disk space (28787605504 B)
[2026-01-26 13:14:40] 2026-01-26 18:13:57,795 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-01-26 13:14:40] 2026-01-26 18:13:57,796 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6983773877: 5499438 B (within 5033164800 B limit)
[2026-01-26 13:14:40] 2026-01-26 18:13:57,796 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6983773877/HITS.48318042._002204.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-26 13:14:40] 2026-01-26 18:13:57,796 | INFO     | total size of present files: 0 B (workdir size: 5499438 B)
[2026-01-26 13:14:40] 2026-01-26 18:13:57,796 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6983773877/HITS.48318042._002204.pool.root.1 since it does not exist
[2026-01-26 13:14:40] 2026-01-26 18:13:57,884 | INFO     | number of running child processes to parent process 11447: 1
[2026-01-26 13:14:40] 2026-01-26 18:13:57,884 | INFO     | maximum number of monitored processes: 6
[2026-01-26 13:14:40] 2026-01-26 18:13:58,137 | INFO     | job 6983773877 has state=finished
[2026-01-26 13:14:40] 2026-01-26 18:13:58,138 | INFO     | preparing for final server update for job 6983773877 in state='finished'
[2026-01-26 13:14:40] 2026-01-26 18:13:58,138 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6983773877/jobReport.json
[2026-01-26 13:14:40] 2026-01-26 18:13:58,142 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-26 13:14:40] 2026-01-26 18:13:58,142 | INFO     | this job has now completed (state=finished)
[2026-01-26 13:14:40] 2026-01-26 18:13:58,142 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 13:14:40] 2026-01-26 18:13:58,143 | INFO     | log transfer has been attempted: DONE
[2026-01-26 13:14:40] 2026-01-26 18:13:58,143 | INFO     | job 6983773877 has finished - writing final server update
[2026-01-26 13:14:40] 2026-01-26 18:13:58,143 | INFO     | total number of processed events: 400 (read)
[2026-01-26 13:14:40] 2026-01-26 18:13:58,146 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983773877/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 13:14:40] 2026-01-26 18:13:58,147 | INFO     | extracted standard info from prmon json
[2026-01-26 13:14:40] 2026-01-26 18:13:58,147 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 13:14:40] 2026-01-26 18:13:58,147 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 13:14:40] 2026-01-26 18:13:58,147 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 13:14:40] 2026-01-26 18:13:58,147 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 13:14:40] 2026-01-26 18:13:58,149 | INFO     | fitting pss+swap vs Time
[2026-01-26 13:14:40] 2026-01-26 18:13:58,149 | INFO     | sum of square deviations: 97479037.0
[2026-01-26 13:14:40] 2026-01-26 18:13:58,149 | INFO     | sum of deviations: -5192091616.000001
[2026-01-26 13:14:40] 2026-01-26 18:13:58,150 | INFO     | mean x: 1769449019.5
[2026-01-26 13:14:40] 2026-01-26 18:13:58,150 | INFO     | mean y: 2733448.6470588236
[2026-01-26 13:14:40] 2026-01-26 18:13:58,150 | INFO     | intersect: 94250088591.12115
[2026-01-26 13:14:40] 2026-01-26 18:13:58,150 | INFO     | chi2: 0.05712249901707116
[2026-01-26 13:14:40] 2026-01-26 18:13:58,150 | INFO     | current memory leak: -53.26 B/s (using 68 data points, chi2=0.06)
[2026-01-26 13:14:40] 2026-01-26 18:13:58,150 | INFO     | could have reported an average CPU frequency of 1684 MHz (6 samples)
[2026-01-26 13:14:40] 2026-01-26 18:13:58,151 | INFO     | ..............................
[2026-01-26 13:14:40] 2026-01-26 18:13:58,151 | INFO     | . Timing measurements:
[2026-01-26 13:14:40] 2026-01-26 18:13:58,151 | INFO     | . get job = 0 s
[2026-01-26 13:14:40] 2026-01-26 18:13:58,151 | INFO     | . initial setup = 7 s
[2026-01-26 13:14:40] 2026-01-26 18:13:58,151 | INFO     | . payload setup = 7 s
[2026-01-26 13:14:40] 2026-01-26 18:13:58,151 | INFO     | . stage-in = 0 s
[2026-01-26 13:14:40] 2026-01-26 18:13:58,151 | INFO     | . payload execution = 4564 s
[2026-01-26 13:14:40] 2026-01-26 18:13:58,151 | INFO     | . stage-out = 0 s
[2026-01-26 13:14:40] 2026-01-26 18:13:58,152 | INFO     | . log creation = 0 s
[2026-01-26 13:14:40] 2026-01-26 18:13:58,152 | INFO     | ..............................
[2026-01-26 13:14:40] 2026-01-26 18:13:58,233 | INFO     | 
[2026-01-26 13:14:40] 2026-01-26 18:13:58,233 | INFO     | job summary report
[2026-01-26 13:14:40] 2026-01-26 18:13:58,239 | INFO     | --------------------------------------------------
[2026-01-26 13:14:40] 2026-01-26 18:13:58,239 | INFO     | PanDA job id: 6983773877
[2026-01-26 13:14:40] 2026-01-26 18:13:58,239 | INFO     | task id: 48318042
[2026-01-26 13:14:40] 2026-01-26 18:13:58,239 | INFO     | errors: (none)
[2026-01-26 13:14:40] 2026-01-26 18:13:58,240 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 13:14:40] 2026-01-26 18:13:58,240 | INFO     | pilot state: finished 
[2026-01-26 13:14:40] 2026-01-26 18:13:58,240 | INFO     | transexitcode: 0
[2026-01-26 13:14:40] 2026-01-26 18:13:58,240 | INFO     | exeerrorcode: 0
[2026-01-26 13:14:40] 2026-01-26 18:13:58,240 | INFO     | exeerrordiag: 
[2026-01-26 13:14:40] 2026-01-26 18:13:58,240 | INFO     | exitcode: 0
[2026-01-26 13:14:40] 2026-01-26 18:13:58,240 | INFO     | exitmsg: OK
[2026-01-26 13:14:40] 2026-01-26 18:13:58,241 | INFO     | cpuconsumptiontime: 50305 s
[2026-01-26 13:14:40] 2026-01-26 18:13:58,241 | INFO     | nevents: 400
[2026-01-26 13:14:40] 2026-01-26 18:13:58,241 | INFO     | neventsw: 0
[2026-01-26 13:14:40] 2026-01-26 18:13:58,241 | INFO     | pid: 11447
[2026-01-26 13:14:40] 2026-01-26 18:13:58,241 | INFO     | pgrp: 11447
[2026-01-26 13:14:40] 2026-01-26 18:13:58,241 | INFO     | corecount: 12
[2026-01-26 13:14:40] 2026-01-26 18:13:58,241 | INFO     | event service: False
[2026-01-26 13:14:40] 2026-01-26 18:13:58,241 | INFO     | sizes: {0: 2283818, 1: 2284279, 12: 2284279, 4574: 2310359, 4575: 2319412, 4577: 2319412, 4579: 2319762}
[2026-01-26 13:14:40] 2026-01-26 18:13:58,242 | INFO     | --------------------------------------------------
[2026-01-26 13:14:40] 2026-01-26 18:13:58,242 | INFO     | 
[2026-01-26 13:14:40] 2026-01-26 18:13:58,242 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 13:14:40] 2026-01-26 18:13:58,264 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 13:14:40] 2026-01-26 18:13:58,265 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 13:14:40] 2026-01-26 18:13:58,265 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 13:14:40] 2026-01-26 18:13:58,265 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 13:14:40] 2026-01-26 18:13:58,265 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 13:14:40] 2026-01-26 18:13:58,265 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 13:14:40] 2026-01-26 18:13:58,265 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 13:14:40] 2026-01-26 18:13:58,266 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 13:14:40] 2026-01-26 18:13:58,266 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 13:14:40] 2026-01-26 18:13:58,266 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 13:14:40] 2026-01-26 18:13:58,266 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 13:14:40] 2026-01-26 18:13:58,266 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 13:14:40] 2026-01-26 18:13:58,266 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 13:14:40] 2026-01-26 18:13:58,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 13:14:40] 2026-01-26 18:13:58,267 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 13:14:40] 2026-01-26 18:13:58,267 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 13:14:40] 2026-01-26 18:13:58,267 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 13:14:40] 2026-01-26 18:13:58,267 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 13:14:40] 2026-01-26 18:13:58,267 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 13:14:40] 2026-01-26 18:13:58,267 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 13:14:40] 2026-01-26 18:13:58,268 | INFO     | job 6983773877 has completed (purged errors)
[2026-01-26 13:14:40] 2026-01-26 18:13:58,268 | INFO     | overall cleanup function is called
[2026-01-26 13:14:40] 2026-01-26 18:13:59,276 | INFO     | --- collectZombieJob: --- 10, [11447]
[2026-01-26 13:14:40] 2026-01-26 18:13:59,276 | INFO     | zombie collector waiting for pid 11447
[2026-01-26 13:14:40] 2026-01-26 18:13:59,276 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 13:14:40] 2026-01-26 18:13:59,276 | INFO     | collected zombie processes
[2026-01-26 13:14:40] 2026-01-26 18:13:59,277 | INFO     | will attempt to kill all subprocesses of pid=11447
[2026-01-26 13:14:40] 2026-01-26 18:13:59,364 | INFO     | process IDs to be killed: [11447] (in reverse order)
[2026-01-26 13:14:40] 2026-01-26 18:13:59,417 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 13:14:40] 2026-01-26 18:13:59,417 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 13:14:40] 2026-01-26 18:13:59,421 | INFO     | did not find any defunct processes belonging to 11447
[2026-01-26 13:14:40] 2026-01-26 18:13:59,424 | INFO     | did not find any defunct processes belonging to 11447
[2026-01-26 13:14:40] 2026-01-26 18:13:59,425 | INFO     | ready for new job
[2026-01-26 13:14:40] 2026-01-26 18:13:59,425 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 13:14:40] 2026-01-26 18:13:59,427 | INFO     | **************************************
[2026-01-26 13:14:40] 2026-01-26 18:13:59,427 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 13:14:40] 2026-01-26 18:13:59,427 | INFO     | **************************************
[2026-01-26 13:14:40] 2026-01-26 18:13:59,427 | INFO     | 
[2026-01-26 13:14:40] 2026-01-26 18:13:59,428 | INFO     | architecture information:
[2026-01-26 13:14:40] 2026-01-26 18:13:59,428 | INFO     | executing command: cat /etc/os-release
[2026-01-26 13:14:40] 2026-01-26 18:13:59,442 | INFO     | cat /etc/os-release:
[2026-01-26 13:14:40] NAME="CentOS Linux"
[2026-01-26 13:14:40] VERSION="7 (Core)"
[2026-01-26 13:14:40] ID="centos"
[2026-01-26 13:14:40] ID_LIKE="rhel fedora"
[2026-01-26 13:14:40] VERSION_ID="7"
[2026-01-26 13:14:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 13:14:40] ANSI_COLOR="0;31"
[2026-01-26 13:14:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 13:14:40] HOME_URL="https://www.centos.org/"
[2026-01-26 13:14:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 13:14:40] 
[2026-01-26 13:14:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 13:14:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 13:14:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 13:14:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 13:14:40] 
[2026-01-26 13:14:40] 2026-01-26 18:13:59,442 | INFO     | **************************************
[2026-01-26 13:14:40] 2026-01-26 18:13:59,945 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 13:14:40] 2026-01-26 18:13:59,961 | INFO     | sufficient remaining disk space (28793896960 B)
[2026-01-26 13:14:40] 2026-01-26 18:13:59,961 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 13:14:40] 2026-01-26 18:13:59,962 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 13:14:40] 2026-01-26 18:13:59,962 | INFO     | update_server=False
[2026-01-26 13:14:40] 2026-01-26 18:13:59,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 13:14:40] 2026-01-26 18:13:59,962 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:14:40] 2026-01-26 18:13:59,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 13:14:40] 2026-01-26 18:14:00,254 | INFO     | all payload control threads have been joined
[2026-01-26 13:14:40] 2026-01-26 18:14:00,388 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 13:14:40] 2026-01-26 18:14:00,388 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 13:14:40] 2026-01-26 18:14:00,388 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:14:40] 2026-01-26 18:14:00,389 | INFO     | will abort loop
[2026-01-26 13:14:40] 2026-01-26 18:14:00,863 | INFO     | all job control threads have been joined
[2026-01-26 13:14:40] 2026-01-26 18:14:00,869 | INFO     | all data control threads have been joined
[2026-01-26 13:14:40] 2026-01-26 18:14:00,967 | INFO     | [job] retrieve thread has finished
[2026-01-26 13:14:40] 2026-01-26 18:14:00,968 | INFO     | [job] queue monitor thread has finished
[2026-01-26 13:14:40] 2026-01-26 18:14:01,145 | INFO     | [data] copytool_in thread has finished
[2026-01-26 13:14:40] 2026-01-26 18:14:01,156 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 13:14:40] 2026-01-26 18:14:01,260 | INFO     | [payload] control thread has finished
[2026-01-26 13:14:40] 2026-01-26 18:14:01,394 | INFO     | [job] job monitor thread has finished
[2026-01-26 13:14:40] 2026-01-26 18:14:01,756 | INFO     | [payload] failed_post thread has finished
[2026-01-26 13:14:40] 2026-01-26 18:14:01,866 | INFO     | [job] control thread has finished
[2026-01-26 13:14:40] 2026-01-26 18:14:01,872 | INFO     | [data] control thread has finished
[2026-01-26 13:14:40] 2026-01-26 18:14:01,884 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 13:14:40] 2026-01-26 18:14:01,913 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 13:14:40] 2026-01-26 18:14:01,956 | INFO     | [job] validate thread has finished
[2026-01-26 13:14:40] 2026-01-26 18:14:01,968 | INFO     | [data] copytool_out thread has finished
[2026-01-26 13:14:40] 2026-01-26 18:14:02,256 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 13:14:40] 2026-01-26 18:14:02,483 | INFO     | [payload] validate_post thread has finished
[2026-01-26 13:14:40] 2026-01-26 18:14:05,919 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 13:14:40] 2026-01-26 18:14:10,728 | INFO     | job.realtimelogging is not enabled
[2026-01-26 13:14:40] 2026-01-26 18:14:11,733 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 13:14:40] 2026-01-26 18:14:30,779 | INFO     | PID=7059 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-26 13:14:40] 2026-01-26 18:14:30,780 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 13:14:40] 2026-01-26 18:14:30,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 13:14:40] 2026-01-26 18:14:30,780 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 13:14:40] 2026-01-26 18:14:33,904 | INFO     | [monitor] cgroup control has ended
[2026-01-26 13:14:40] 2026-01-26 18:14:35,624 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139624098871104)>', '<ExcThread(monitor, started 139623204382464)>']
[2026-01-26 13:14:40] 2026-01-26 18:14:35,806 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 13:14:40] 2026-01-26 18:14:35,806 | INFO     | [monitor] control thread has ended
[2026-01-26 13:14:40] 2026-01-26 18:14:40,635 | INFO     | all workflow threads have been joined
[2026-01-26 13:14:40] 2026-01-26 18:14:40,635 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 13:14:40] 2026-01-26 18:14:40,635 | INFO     | traces error code: 0
[2026-01-26 13:14:40] 2026-01-26 18:14:40,636 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 13:14:40] 2026-01-26 18:14:40,725 [wrapper] ==== pilot stdout END ====
[2026-01-26 13:14:40] 2026-01-26 18:14:40,728 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 13:14:40] 2026-01-26 18:14:40,732 [wrapper] pilotpid: 7059
[2026-01-26 13:14:40] 2026-01-26 18:14:40,736 [wrapper] Pilot exit status: 0
[2026-01-26 13:14:40] 2026-01-26 18:14:40,750 [wrapper] pandaids: 6983773877
[2026-01-26 13:14:40] 2026-01-26 18:14:40,788 [wrapper] cleanup supervisor_pilot  1204 7060
[2026-01-26 13:14:40] 2026-01-26 18:14:40,792 [wrapper] Test setup, not cleaning
[2026-01-26 13:14:40] 2026-01-26 18:14:40,796 [wrapper] apfmon messages muted
[2026-01-26 13:14:40] 2026-01-26 18:14:40,800 [wrapper] ==== wrapper stdout END ====
[2026-01-26 13:14:40] 2026-01-26 18:14:40,804 [wrapper] ==== wrapper stderr END ====
[2026-01-26 13:14:40]  *** Error codes and diagnostics ***
[2026-01-26 13:14:40]     "exeErrorCode": 0,
[2026-01-26 13:14:40]     "exeErrorDiag": "",
[2026-01-26 13:14:40]     "pilotErrorCode": 0,
[2026-01-26 13:14:40]     "pilotErrorDiag": "",
[2026-01-26 13:14:40]  *** Listing of results directory ***
[2026-01-26 13:14:40] total 673552
[2026-01-26 13:14:40] -rw-r--r-- 1 boincer umatlas    584422 Jan 26 00:14 pilot3.tar.gz
[2026-01-26 13:14:40] -rwx------ 1 boincer umatlas     36322 Jan 26 00:15 runpilot2-wrapper.sh
[2026-01-26 13:14:40] -rw-r--r-- 1 boincer umatlas      5111 Jan 26 00:15 queuedata.json
[2026-01-26 13:14:40] -rw-r--r-- 1 boincer umatlas       100 Jan 26 11:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 13:14:40] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 11:57 run_atlas
[2026-01-26 13:14:40] -rw-r--r-- 1 boincer umatlas       105 Jan 26 11:57 job.xml
[2026-01-26 13:14:40] -rw-r--r-- 2 boincer umatlas 501247445 Jan 26 11:57 EVNT.48318040._000044.pool.root.1
[2026-01-26 13:14:40] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 11:57 start_atlas.sh
[2026-01-26 13:14:40] drwxrwx--x 2 boincer umatlas      4096 Jan 26 11:57 shared
[2026-01-26 13:14:40] -rw-r--r-- 2 boincer umatlas    597765 Jan 26 11:57 input.tar.gz
[2026-01-26 13:14:40] -rw-r--r-- 1 boincer umatlas         0 Jan 26 11:57 boinc_lockfile
[2026-01-26 13:14:40] -rw-r--r-- 1 boincer umatlas      2533 Jan 26 11:57 pandaJob.out
[2026-01-26 13:14:40] -rw------- 1 boincer umatlas        57 Jan 26 11:57 setup.sh.local
[2026-01-26 13:14:40] -rw------- 1 boincer umatlas   1006276 Jan 26 11:57 agis_schedconf.cvmfs.json
[2026-01-26 13:14:40] -rw------- 1 boincer umatlas   1516246 Jan 26 11:57 agis_ddmendpoints.agis.ALL.json
[2026-01-26 13:14:40] -rw------- 1 boincer umatlas       434 Jan 26 11:57 workernode_map.json
[2026-01-26 13:14:40] drwx------ 5 boincer umatlas      4096 Jan 26 11:57 pilot3
[2026-01-26 13:14:40] -rw-r--r-- 1 boincer umatlas      5953 Jan 26 13:11 init_data.xml
[2026-01-26 13:14:40] -rw------- 1 boincer umatlas 182368311 Jan 26 13:13 HITS.48318042._002204.pool.root.1
[2026-01-26 13:14:40] -rw-r--r-- 1 boincer umatlas       530 Jan 26 13:13 boinc_task_state.xml
[2026-01-26 13:14:40] -rw------- 1 boincer umatlas      1044 Jan 26 13:13 memory_monitor_summary.json
[2026-01-26 13:14:40] -rw------- 1 boincer umatlas    413673 Jan 26 13:13 log.48318042._002204.job.log.tgz.1
[2026-01-26 13:14:40] -rw------- 1 boincer umatlas      6408 Jan 26 13:13 heartbeat.json
[2026-01-26 13:14:40] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 13:14 boinc_mmap_file
[2026-01-26 13:14:40] -rw-r--r-- 1 boincer umatlas        27 Jan 26 13:14 wrapper_checkpoint.txt
[2026-01-26 13:14:40] -rw------- 1 boincer umatlas        95 Jan 26 13:14 pilot_heartbeat.json
[2026-01-26 13:14:40] -rw------- 1 boincer umatlas      4999 Jan 26 13:14 pilotlog.txt
[2026-01-26 13:14:40] -rw------- 1 boincer umatlas    667995 Jan 26 13:14 log.48318042._002204.job.log.1
[2026-01-26 13:14:40] -rw------- 1 boincer umatlas       357 Jan 26 13:14 output.list
[2026-01-26 13:14:40] -rw-r--r-- 1 boincer umatlas       620 Jan 26 13:14 runtime_log
[2026-01-26 13:14:40] -rw------- 1 boincer umatlas   1095680 Jan 26 13:14 result.tar.gz
[2026-01-26 13:14:40] -rw------- 1 boincer umatlas       659 Jan 26 13:14 ZPcNDmU7T48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmB98KDmxflFqm.diag
[2026-01-26 13:14:40] -rw-r--r-- 1 boincer umatlas      9343 Jan 26 13:14 runtime_log.err
[2026-01-26 13:14:40] -rw-r--r-- 1 boincer umatlas     22561 Jan 26 13:14 stderr.txt
[2026-01-26 13:14:40] HITS file was successfully produced:
[2026-01-26 13:14:40] -rw------- 1 boincer umatlas 182368311 Jan 26 13:13 shared/HITS.pool.root.1
[2026-01-26 13:14:40]  *** Contents of shared directory: ***
[2026-01-26 13:14:40] total 669272
[2026-01-26 13:14:40] -rw-r--r-- 2 boincer umatlas 501247445 Jan 26 11:57 ATLAS.root_0
[2026-01-26 13:14:40] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 11:57 start_atlas.sh
[2026-01-26 13:14:40] -rw-r--r-- 2 boincer umatlas    597765 Jan 26 11:57 input.tar.gz
[2026-01-26 13:14:40] -rw------- 1 boincer umatlas 182368311 Jan 26 13:13 HITS.pool.root.1
[2026-01-26 13:14:40] -rw------- 1 boincer umatlas   1095680 Jan 26 13:14 result.tar.gz
13:14:42 (3091): run_atlas exited; CPU time 50282.446399
13:14:42 (3091): called boinc_finish(0)

</stderr_txt>
]]>

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