Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:55 (524615): wrapper (7.7.26015): starting
00:02:55 (524615): wrapper: running run_atlas (--nthreads 12)
[2026-01-27 00:02:55] Arguments: --nthreads 12
[2026-01-27 00:02:55] Threads: 12
[2026-01-27 00:02:55] Checking for CVMFS
[2026-01-27 00:02:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 00:02:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 00:02:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 00:02:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 00:02:58] 2.13.3.0 5327 79542 498560 155573 0 460 32406886 32935936 16925 16776704 0 160035105 99.587 251104257 32185 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-27 00:02:58] CVMFS is ok
[2026-01-27 00:02:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 00:02:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 00:02:58] Further information can be found at the LHC@home message board.
[2026-01-27 00:02:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 00:02:58] Checking for apptainer binary...
[2026-01-27 00:02:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 00:02:58] Running /usr/bin/apptainer --version
[2026-01-27 00:02:58] apptainer version 1.4.5-2.el9
[2026-01-27 00:02:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 00:02:59] c6-1-24-3.aglt2.org
[2026-01-27 00:02:59] apptainer works
[2026-01-27 00:02:59] Set ATHENA_PROC_NUMBER=12
[2026-01-27 00:02:59] Set ATHENA_CORE_NUMBER=12
[2026-01-27 00:02:59] Starting ATLAS job with PandaID=6984225875
[2026-01-27 00:02:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 05:32:02]  *** The last 200 lines of the pilot log: ***
[2026-01-27 05:32:02] 2026-01-27 10:31:26,349 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 05:32:02] 2026-01-27 10:31:26,349 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 05:32:02] 2026-01-27 10:31:26,349 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 05:32:02] 2026-01-27 10:31:26,357 | INFO     | fitting pss+swap vs Time
[2026-01-27 05:32:02] 2026-01-27 10:31:26,358 | INFO     | sum of square deviations: 10254799520.922068
[2026-01-27 05:32:02] 2026-01-27 10:31:26,361 | INFO     | sum of deviations: 201090274413.2617
[2026-01-27 05:32:02] 2026-01-27 10:31:26,362 | INFO     | mean x: 1769500096.3489096
[2026-01-27 05:32:02] 2026-01-27 10:31:26,362 | INFO     | mean y: 2546695.7476635515
[2026-01-27 05:32:02] 2026-01-27 10:31:26,362 | INFO     | intersect: -34696255482.015495
[2026-01-27 05:32:02] 2026-01-27 10:31:26,362 | INFO     | chi2: 5.12944707163247
[2026-01-27 05:32:02] 2026-01-27 10:31:26,363 | INFO     | sum of square deviations: 9783090171.680384
[2026-01-27 05:32:02] 2026-01-27 10:31:26,366 | INFO     | sum of deviations: 218715478533.75607
[2026-01-27 05:32:02] 2026-01-27 10:31:26,367 | INFO     | mean x: 1769499943.870253
[2026-01-27 05:32:02] 2026-01-27 10:31:26,367 | INFO     | mean y: 2552305.920886076
[2026-01-27 05:32:02] 2026-01-27 10:31:26,367 | INFO     | intersect: -39557241194.639404
[2026-01-27 05:32:02] 2026-01-27 10:31:26,367 | INFO     | chi2: 4.433922692038185
[2026-01-27 05:32:02] 2026-01-27 10:31:26,367 | INFO     | current chi2=4.433922692038185 (change=13.559441590513007 %)
[2026-01-27 05:32:02] 2026-01-27 10:31:26,368 | INFO     | right removable region: 315
[2026-01-27 05:32:02] 2026-01-27 10:31:26,368 | INFO     | sum of square deviations: 9782884177.873417
[2026-01-27 05:32:02] 2026-01-27 10:31:26,371 | INFO     | sum of deviations: 103495293184.17728
[2026-01-27 05:32:02] 2026-01-27 10:31:26,372 | INFO     | mean x: 1769500248.8607595
[2026-01-27 05:32:02] 2026-01-27 10:31:26,372 | INFO     | mean y: 2578182.594936709
[2026-01-27 05:32:02] 2026-01-27 10:31:26,372 | INFO     | intersect: -18717355910.003963
[2026-01-27 05:32:02] 2026-01-27 10:31:26,372 | INFO     | chi2: 1.8516199302759917
[2026-01-27 05:32:02] 2026-01-27 10:31:26,373 | INFO     | current chi2=1.8516199302759917 (change=63.90215349884281 %)
[2026-01-27 05:32:02] 2026-01-27 10:31:26,373 | INFO     | sum of square deviations: 9325705706.21226
[2026-01-27 05:32:02] 2026-01-27 10:31:26,376 | INFO     | sum of deviations: 59973210029.22825
[2026-01-27 05:32:02] 2026-01-27 10:31:26,377 | INFO     | mean x: 1769500401.3665595
[2026-01-27 05:32:02] 2026-01-27 10:31:26,377 | INFO     | mean y: 2592679.8488745983
[2026-01-27 05:32:02] 2026-01-27 10:31:26,377 | INFO     | intersect: -11376987864.631256
[2026-01-27 05:32:02] 2026-01-27 10:31:26,377 | INFO     | chi2: 1.2538471134576539
[2026-01-27 05:32:02] 2026-01-27 10:31:26,378 | INFO     | current chi2=1.2538471134576539 (change=32.283775252367114 %)
[2026-01-27 05:32:02] 2026-01-27 10:31:26,378 | INFO     | sum of square deviations: 8882955044.526205
[2026-01-27 05:32:02] 2026-01-27 10:31:26,381 | INFO     | sum of deviations: 26039814642.59806
[2026-01-27 05:32:02] 2026-01-27 10:31:26,381 | INFO     | mean x: 1769500553.879085
[2026-01-27 05:32:02] 2026-01-27 10:31:26,382 | INFO     | mean y: 2604366.4215686275
[2026-01-27 05:32:02] 2026-01-27 10:31:26,382 | INFO     | intersect: -5184573346.62782
[2026-01-27 05:32:02] 2026-01-27 10:31:26,382 | INFO     | chi2: 0.9019214098443098
[2026-01-27 05:32:02] 2026-01-27 10:31:26,382 | INFO     | current chi2=0.9019214098443098 (change=28.06767267205817 %)
[2026-01-27 05:32:02] 2026-01-27 10:31:26,383 | INFO     | sum of square deviations: 8454474657.295708
[2026-01-27 05:32:02] 2026-01-27 10:31:26,386 | INFO     | sum of deviations: 2793571515.2425156
[2026-01-27 05:32:02] 2026-01-27 10:31:26,386 | INFO     | mean x: 1769500706.3853822
[2026-01-27 05:32:02] 2026-01-27 10:31:26,386 | INFO     | mean y: 2612640.2823920264
[2026-01-27 05:32:02] 2026-01-27 10:31:26,386 | INFO     | intersect: -582074991.9992901
[2026-01-27 05:32:02] 2026-01-27 10:31:26,387 | INFO     | chi2: 0.7318964947283905
[2026-01-27 05:32:02] 2026-01-27 10:31:26,387 | INFO     | current chi2=0.7318964947283905 (change=18.85141136025024 %)
[2026-01-27 05:32:02] 2026-01-27 10:31:26,387 | INFO     | left removable region: 40
[2026-01-27 05:32:02] 2026-01-27 10:31:26,388 | INFO     | sum of square deviations: 6446999027.876348
[2026-01-27 05:32:02] 2026-01-27 10:31:26,390 | INFO     | sum of deviations: 13156318435.992733
[2026-01-27 05:32:02] 2026-01-27 10:31:26,391 | INFO     | mean x: 1769501133.4436364
[2026-01-27 05:32:02] 2026-01-27 10:31:26,391 | INFO     | mean y: 2623225.9672727273
[2026-01-27 05:32:02] 2026-01-27 10:31:26,391 | INFO     | intersect: -3608377843.4873724
[2026-01-27 05:32:02] 2026-01-27 10:31:26,391 | INFO     | chi2: 0.006174890753981326
[2026-01-27 05:32:02] 2026-01-27 10:31:26,392 | INFO     | current memory leak: 2.04 B/s (using 275 data points, chi2=0.01)
[2026-01-27 05:32:02] 2026-01-27 10:31:26,392 | INFO     | could have reported an average CPU frequency of 2916 MHz (14 samples)
[2026-01-27 05:32:02] 2026-01-27 10:31:26,393 | INFO     | ..............................
[2026-01-27 05:32:02] 2026-01-27 10:31:26,393 | INFO     | . Timing measurements:
[2026-01-27 05:32:02] 2026-01-27 10:31:26,393 | INFO     | . get job = 0 s
[2026-01-27 05:32:02] 2026-01-27 10:31:26,393 | INFO     | . initial setup = 31 s
[2026-01-27 05:32:02] 2026-01-27 10:31:26,393 | INFO     | . payload setup = 42 s
[2026-01-27 05:32:02] 2026-01-27 10:31:26,393 | INFO     | . stage-in = 0 s
[2026-01-27 05:32:02] 2026-01-27 10:31:26,393 | INFO     | . payload execution = 19574 s
[2026-01-27 05:32:02] 2026-01-27 10:31:26,393 | INFO     | . stage-out = 2 s
[2026-01-27 05:32:02] 2026-01-27 10:31:26,393 | INFO     | . log creation = 0 s
[2026-01-27 05:32:02] 2026-01-27 10:31:26,393 | INFO     | ..............................
[2026-01-27 05:32:02] 2026-01-27 10:31:26,488 | INFO     | 
[2026-01-27 05:32:02] 2026-01-27 10:31:26,489 | INFO     | job summary report
[2026-01-27 05:32:02] 2026-01-27 10:31:26,489 | INFO     | --------------------------------------------------
[2026-01-27 05:32:02] 2026-01-27 10:31:26,489 | INFO     | PanDA job id: 6984225875
[2026-01-27 05:32:02] 2026-01-27 10:31:26,489 | INFO     | task id: 48318026
[2026-01-27 05:32:02] 2026-01-27 10:31:26,489 | INFO     | errors: (none)
[2026-01-27 05:32:02] 2026-01-27 10:31:26,489 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 05:32:02] 2026-01-27 10:31:26,489 | INFO     | pilot state: finished 
[2026-01-27 05:32:02] 2026-01-27 10:31:26,489 | INFO     | transexitcode: 0
[2026-01-27 05:32:02] 2026-01-27 10:31:26,489 | INFO     | exeerrorcode: 0
[2026-01-27 05:32:02] 2026-01-27 10:31:26,489 | INFO     | exeerrordiag: 
[2026-01-27 05:32:02] 2026-01-27 10:31:26,489 | INFO     | exitcode: 0
[2026-01-27 05:32:02] 2026-01-27 10:31:26,490 | INFO     | exitmsg: OK
[2026-01-27 05:32:02] 2026-01-27 10:31:26,490 | INFO     | cpuconsumptiontime: 45876 s
[2026-01-27 05:32:02] 2026-01-27 10:31:26,490 | INFO     | nevents: 400
[2026-01-27 05:32:02] 2026-01-27 10:31:26,490 | INFO     | neventsw: 0
[2026-01-27 05:32:02] 2026-01-27 10:31:26,490 | INFO     | pid: 542578
[2026-01-27 05:32:02] 2026-01-27 10:31:26,490 | INFO     | pgrp: 542578
[2026-01-27 05:32:02] 2026-01-27 10:31:26,490 | INFO     | corecount: 12
[2026-01-27 05:32:02] 2026-01-27 10:31:26,490 | INFO     | event service: False
[2026-01-27 05:32:02] 2026-01-27 10:31:26,490 | INFO     | sizes: {0: 2283138, 1: 2284196, 2: 2284256, 3: 2284284, 19620: 2317274, 19621: 2317273, 19624: 2326511, 19625: 2326649}
[2026-01-27 05:32:02] 2026-01-27 10:31:26,490 | INFO     | --------------------------------------------------
[2026-01-27 05:32:02] 2026-01-27 10:31:26,490 | INFO     | 
[2026-01-27 05:32:02] 2026-01-27 10:31:26,490 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-27 05:32:02] 2026-01-27 10:31:26,512 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 05:32:02] 2026-01-27 10:31:26,512 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 05:32:02] 2026-01-27 10:31:26,512 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 05:32:02] 2026-01-27 10:31:26,512 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 05:32:02] 2026-01-27 10:31:26,512 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 05:32:02] 2026-01-27 10:31:26,512 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 05:32:02] 2026-01-27 10:31:26,513 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 05:32:02] 2026-01-27 10:31:26,513 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 05:32:02] 2026-01-27 10:31:26,513 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 05:32:02] 2026-01-27 10:31:26,513 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 05:32:02] 2026-01-27 10:31:26,513 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 05:32:02] 2026-01-27 10:31:26,513 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 05:32:02] 2026-01-27 10:31:26,513 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 05:32:02] 2026-01-27 10:31:26,513 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 05:32:02] 2026-01-27 10:31:26,513 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 05:32:02] 2026-01-27 10:31:26,513 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 05:32:02] 2026-01-27 10:31:26,513 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 05:32:02] 2026-01-27 10:31:26,513 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 05:32:02] 2026-01-27 10:31:26,513 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 05:32:02] 2026-01-27 10:31:26,514 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 05:32:02] 2026-01-27 10:31:26,514 | INFO     | job 6984225875 has completed (purged errors)
[2026-01-27 05:32:02] 2026-01-27 10:31:26,514 | INFO     | overall cleanup function is called
[2026-01-27 05:32:02] 2026-01-27 10:31:27,523 | INFO     | --- collectZombieJob: --- 10, [542578]
[2026-01-27 05:32:02] 2026-01-27 10:31:27,523 | INFO     | zombie collector waiting for pid 542578
[2026-01-27 05:32:02] 2026-01-27 10:31:27,523 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 05:32:02] 2026-01-27 10:31:27,524 | INFO     | collected zombie processes
[2026-01-27 05:32:02] 2026-01-27 10:31:27,524 | INFO     | will attempt to kill all subprocesses of pid=542578
[2026-01-27 05:32:02] 2026-01-27 10:31:27,849 | INFO     | process IDs to be killed: [542578] (in reverse order)
[2026-01-27 05:32:02] 2026-01-27 10:31:27,953 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 05:32:02] 2026-01-27 10:31:27,953 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 05:32:02] 2026-01-27 10:31:27,970 | INFO     | did not find any defunct processes belonging to 542578
[2026-01-27 05:32:02] 2026-01-27 10:31:27,983 | INFO     | did not find any defunct processes belonging to 542578
[2026-01-27 05:32:02] 2026-01-27 10:31:27,984 | INFO     | ready for new job
[2026-01-27 05:32:02] 2026-01-27 10:31:27,984 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 05:32:02] 2026-01-27 10:31:27,987 | INFO     | **************************************
[2026-01-27 05:32:02] 2026-01-27 10:31:27,987 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 05:32:02] 2026-01-27 10:31:27,987 | INFO     | **************************************
[2026-01-27 05:32:02] 2026-01-27 10:31:27,987 | INFO     | 
[2026-01-27 05:32:02] 2026-01-27 10:31:27,991 | INFO     | architecture information:
[2026-01-27 05:32:02] 2026-01-27 10:31:27,992 | INFO     | executing command: cat /etc/os-release
[2026-01-27 05:32:02] 2026-01-27 10:31:28,009 | INFO     | cat /etc/os-release:
[2026-01-27 05:32:02] NAME="CentOS Linux"
[2026-01-27 05:32:02] VERSION="7 (Core)"
[2026-01-27 05:32:02] ID="centos"
[2026-01-27 05:32:02] ID_LIKE="rhel fedora"
[2026-01-27 05:32:02] VERSION_ID="7"
[2026-01-27 05:32:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 05:32:02] ANSI_COLOR="0;31"
[2026-01-27 05:32:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 05:32:02] HOME_URL="https://www.centos.org/"
[2026-01-27 05:32:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 05:32:02] 
[2026-01-27 05:32:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 05:32:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 05:32:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 05:32:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 05:32:02] 
[2026-01-27 05:32:02] 2026-01-27 10:31:28,009 | INFO     | **************************************
[2026-01-27 05:32:02] 2026-01-27 10:31:28,513 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-27 05:32:02] 2026-01-27 10:31:28,536 | INFO     | sufficient remaining disk space (73626812416 B)
[2026-01-27 05:32:02] 2026-01-27 10:31:28,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 05:32:02] 2026-01-27 10:31:28,537 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 05:32:02] 2026-01-27 10:31:28,537 | INFO     | update_server=False
[2026-01-27 05:32:02] 2026-01-27 10:31:28,537 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 05:32:02] 2026-01-27 10:31:28,537 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 05:32:02] 2026-01-27 10:31:28,537 | INFO     | aborting loop
[2026-01-27 05:32:02] 2026-01-27 10:31:28,538 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 05:32:02] 2026-01-27 10:31:28,565 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 05:32:02] 2026-01-27 10:31:28,694 | INFO     | all data control threads have been joined
[2026-01-27 05:32:02] 2026-01-27 10:31:29,443 | INFO     | all payload control threads have been joined
[2026-01-27 05:32:02] 2026-01-27 10:31:29,543 | INFO     | [job] retrieve thread has finished
[2026-01-27 05:32:02] 2026-01-27 10:31:29,543 | INFO     | [job] job monitor thread has finished
[2026-01-27 05:32:02] 2026-01-27 10:31:29,633 | INFO     | [job] validate thread has finished
[2026-01-27 05:32:02] 2026-01-27 10:31:29,710 | INFO     | [data] control thread has finished
[2026-01-27 05:32:02] 2026-01-27 10:31:29,872 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 05:32:02] 2026-01-27 10:31:29,931 | INFO     | [data] copytool_in thread has finished
[2026-01-27 05:32:02] 2026-01-27 10:31:30,026 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 05:32:02] 2026-01-27 10:31:30,030 | INFO     | all job control threads have been joined
[2026-01-27 05:32:02] 2026-01-27 10:31:30,032 | INFO     | [payload] validate_post thread has finished
[2026-01-27 05:32:02] 2026-01-27 10:31:30,162 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 05:32:02] 2026-01-27 10:31:30,449 | INFO     | [payload] control thread has finished
[2026-01-27 05:32:02] 2026-01-27 10:31:30,572 | INFO     | [data] copytool_out thread has finished
[2026-01-27 05:32:02] 2026-01-27 10:31:30,573 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 05:32:02] 2026-01-27 10:31:30,949 | INFO     | [payload] failed_post thread has finished
[2026-01-27 05:32:02] 2026-01-27 10:31:31,036 | INFO     | [job] control thread has finished
[2026-01-27 05:32:02] 2026-01-27 10:31:31,506 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 05:32:02] 2026-01-27 10:31:32,512 | INFO     | [job] queue monitor thread has finished
[2026-01-27 05:32:02] 2026-01-27 10:31:32,547 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 05:32:02] 2026-01-27 10:31:55,597 | INFO     | [monitor] cgroup control has ended
[2026-01-27 05:32:02] 2026-01-27 10:31:56,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140141240772416)>', '<ExcThread(monitor, started 140140018136832)>']
[2026-01-27 05:32:02] 2026-01-27 10:31:58,956 | INFO     | PID=532338 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 05:32:02] 2026-01-27 10:31:58,956 | INFO     | .. there are 16 such processes running
[2026-01-27 05:32:02] 2026-01-27 10:31:58,959 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 05:32:02] 2026-01-27 10:31:58,959 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 05:32:02] 2026-01-27 10:31:58,959 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 05:32:02] 2026-01-27 10:31:58,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 05:32:02] 2026-01-27 10:31:58,959 | INFO     | [monitor] control thread has ended
[2026-01-27 05:32:02] 2026-01-27 10:32:01,632 | INFO     | all workflow threads have been joined
[2026-01-27 05:32:02] 2026-01-27 10:32:01,633 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 05:32:02] 2026-01-27 10:32:01,634 | INFO     | traces error code: 0
[2026-01-27 05:32:02] 2026-01-27 10:32:01,634 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 05:32:02] 2026-01-27 10:32:01,917 [wrapper] ==== pilot stdout END ====
[2026-01-27 05:32:02] 2026-01-27 10:32:01,920 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 05:32:02] 2026-01-27 10:32:01,922 [wrapper] pilotpid: 532338
[2026-01-27 05:32:02] 2026-01-27 10:32:01,925 [wrapper] Pilot exit status: 0
[2026-01-27 05:32:02] 2026-01-27 10:32:01,944 [wrapper] pandaids: 6984225875
[2026-01-27 05:32:02] 2026-01-27 10:32:02,039 [wrapper] cleanup supervisor_pilot 1312925 532339
[2026-01-27 05:32:02] 2026-01-27 10:32:02,045 [wrapper] Test setup, not cleaning
[2026-01-27 05:32:02] 2026-01-27 10:32:02,048 [wrapper] apfmon messages muted
[2026-01-27 05:32:02] 2026-01-27 10:32:02,051 [wrapper] ==== wrapper stdout END ====
[2026-01-27 05:32:02] 2026-01-27 10:32:02,053 [wrapper] ==== wrapper stderr END ====
[2026-01-27 05:32:02]  *** Error codes and diagnostics ***
[2026-01-27 05:32:02]     "exeErrorCode": 0,
[2026-01-27 05:32:02]     "exeErrorDiag": "",
[2026-01-27 05:32:02]     "pilotErrorCode": 0,
[2026-01-27 05:32:02]     "pilotErrorDiag": "",
[2026-01-27 05:32:02]  *** Listing of results directory ***
[2026-01-27 05:32:02] total 732944
[2026-01-27 05:32:02] -rw-r--r--. 1 boincer umatlas    584422 Jan 26 04:48 pilot3.tar.gz
[2026-01-27 05:32:02] -rwx------. 1 boincer umatlas     36322 Jan 26 04:49 runpilot2-wrapper.sh
[2026-01-27 05:32:02] -rw-r--r--. 1 boincer umatlas      5111 Jan 26 04:50 queuedata.json
[2026-01-27 05:32:02] -rw-r--r--. 1 boincer umatlas       100 Jan 27 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 05:32:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 27 00:02 run_atlas
[2026-01-27 05:32:02] -rw-r--r--. 1 boincer umatlas       105 Jan 27 00:02 job.xml
[2026-01-27 05:32:02] -rw-r--r--. 2 boincer umatlas 533445719 Jan 27 00:02 EVNT.48318024._000012.pool.root.1
[2026-01-27 05:32:02] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 00:02 start_atlas.sh
[2026-01-27 05:32:02] drwxrwx--x. 2 boincer umatlas      4096 Jan 27 00:02 shared
[2026-01-27 05:32:02] -rw-r--r--. 2 boincer umatlas    597770 Jan 27 00:02 input.tar.gz
[2026-01-27 05:32:02] -rw-r--r--. 1 boincer umatlas         0 Jan 27 00:02 boinc_lockfile
[2026-01-27 05:32:02] -rw-r--r--. 1 boincer umatlas      2521 Jan 27 00:02 pandaJob.out
[2026-01-27 05:32:02] -rw-------. 1 boincer umatlas        57 Jan 27 00:03 setup.sh.local
[2026-01-27 05:32:02] -rw-------. 1 boincer umatlas   1006441 Jan 27 00:03 agis_schedconf.cvmfs.json
[2026-01-27 05:32:02] -rw-------. 1 boincer umatlas       442 Jan 27 00:04 workernode_map.json
[2026-01-27 05:32:02] drwx------. 5 boincer umatlas      4096 Jan 27 00:04 pilot3
[2026-01-27 05:32:02] -rw-r--r--. 1 boincer umatlas      6842 Jan 27 05:30 init_data.xml
[2026-01-27 05:32:02] -rw-------. 1 boincer umatlas 207302889 Jan 27 05:30 HITS.48318026._000589.pool.root.1
[2026-01-27 05:32:02] -rw-r--r--. 1 boincer umatlas       530 Jan 27 05:30 boinc_task_state.xml
[2026-01-27 05:32:02] -rw-------. 1 boincer umatlas      1040 Jan 27 05:31 memory_monitor_summary.json
[2026-01-27 05:32:02] -rw-------. 1 boincer umatlas   1516246 Jan 27 05:31 agis_ddmendpoints.agis.ALL.json
[2026-01-27 05:32:02] -rw-------. 1 boincer umatlas    590839 Jan 27 05:31 log.48318026._000589.job.log.tgz.1
[2026-01-27 05:32:02] -rw-------. 1 boincer umatlas      6389 Jan 27 05:31 heartbeat.json
[2026-01-27 05:32:02] -rw-------. 1 boincer umatlas        95 Jan 27 05:31 pilot_heartbeat.json
[2026-01-27 05:32:02] -rw-------. 1 boincer umatlas      4819 Jan 27 05:32 pilotlog.txt
[2026-01-27 05:32:02] -rw-------. 1 boincer umatlas   2325883 Jan 27 05:32 log.48318026._000589.job.log.1
[2026-01-27 05:32:02] -rw-------. 1 boincer umatlas       357 Jan 27 05:32 output.list
[2026-01-27 05:32:02] -rw-r--r--. 1 boincer umatlas       620 Jan 27 05:32 runtime_log
[2026-01-27 05:32:02] -rw-------. 1 boincer umatlas   2938880 Jan 27 05:32 result.tar.gz
[2026-01-27 05:32:02] -rw-r--r--. 1 boincer umatlas      9349 Jan 27 05:32 runtime_log.err
[2026-01-27 05:32:02] -rw-------. 1 boincer umatlas       656 Jan 27 05:32 gymNDmTPY48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHe9KDmYLCgln.diag
[2026-01-27 05:32:02] -rw-r--r--. 1 boincer umatlas      8192 Jan 27 05:32 boinc_mmap_file
[2026-01-27 05:32:02] -rw-r--r--. 1 boincer umatlas        27 Jan 27 05:32 wrapper_checkpoint.txt
[2026-01-27 05:32:02] -rw-r--r--. 1 boincer umatlas     20997 Jan 27 05:32 stderr.txt
[2026-01-27 05:32:02] HITS file was successfully produced:
[2026-01-27 05:32:02] -rw-------. 1 boincer umatlas 207302889 Jan 27 05:30 shared/HITS.pool.root.1
[2026-01-27 05:32:02]  *** Contents of shared directory: ***
[2026-01-27 05:32:02] total 726872
[2026-01-27 05:32:02] -rw-r--r--. 2 boincer umatlas 533445719 Jan 27 00:02 ATLAS.root_0
[2026-01-27 05:32:02] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 00:02 start_atlas.sh
[2026-01-27 05:32:02] -rw-r--r--. 2 boincer umatlas    597770 Jan 27 00:02 input.tar.gz
[2026-01-27 05:32:02] -rw-------. 1 boincer umatlas 207302889 Jan 27 05:30 HITS.pool.root.1
[2026-01-27 05:32:02] -rw-------. 1 boincer umatlas   2938880 Jan 27 05:32 result.tar.gz
05:32:04 (524615): run_atlas exited; CPU time 46454.691213
05:32:04 (524615): called boinc_finish(0)

</stderr_txt>
]]>

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