Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:10 (2700897): wrapper (7.7.26015): starting
00:03:10 (2700897): wrapper: running run_atlas (--nthreads 9)
[2026-01-27 00:03:10] Arguments: --nthreads 9
[2026-01-27 00:03:10] Threads: 9
[2026-01-27 00:03:10] Checking for CVMFS
[2026-01-27 00:03:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 00:03:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 00:03:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 00:03:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 00:03:12] 2.13.3.0 10299 118884 711956 155573 0 596 27053382 32935937 42394 16776704 0 1099947370 99.774 609945321 28889 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-27 00:03:12] CVMFS is ok
[2026-01-27 00:03:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 00:03:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 00:03:12] Further information can be found at the LHC@home message board.
[2026-01-27 00:03:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 00:03:12] Checking for apptainer binary...
[2026-01-27 00:03:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 00:03:12] Running /usr/bin/apptainer --version
[2026-01-27 00:03:12] apptainer version 1.4.5-2.el9
[2026-01-27 00:03:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 00:03:12] c-3-40.aglt2.org
[2026-01-27 00:03:12] apptainer works
[2026-01-27 00:03:12] Set ATHENA_PROC_NUMBER=9
[2026-01-27 00:03:12] Set ATHENA_CORE_NUMBER=9
[2026-01-27 00:03:12] Starting ATLAS job with PandaID=6984227277
[2026-01-27 00:03:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 08:45:27]  *** The last 200 lines of the pilot log: ***
[2026-01-27 08:45:27] 2026-01-27 13:44:35,963 | INFO     | log transfer has been attempted: DONE
[2026-01-27 08:45:27] 2026-01-27 13:44:35,963 | INFO     | job 6984227277 has finished - writing final server update
[2026-01-27 08:45:27] 2026-01-27 13:44:35,964 | INFO     | total number of processed events: 400 (read)
[2026-01-27 08:45:27] 2026-01-27 13:44:36,156 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6984227277/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 08:45:27] 2026-01-27 13:44:36,156 | INFO     | extracted standard info from prmon json
[2026-01-27 08:45:27] 2026-01-27 13:44:36,157 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 08:45:27] 2026-01-27 13:44:36,157 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 08:45:27] 2026-01-27 13:44:36,157 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 08:45:27] 2026-01-27 13:44:36,157 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 08:45:27] 2026-01-27 13:44:36,193 | INFO     | fitting pss+swap vs Time
[2026-01-27 08:45:27] 2026-01-27 13:44:36,223 | INFO     | sum of square deviations: 40890209364.44024
[2026-01-27 08:45:27] 2026-01-27 13:44:36,234 | INFO     | sum of deviations: 208030891609.65408
[2026-01-27 08:45:27] 2026-01-27 13:44:36,234 | INFO     | mean x: 1769505912.3182712
[2026-01-27 08:45:27] 2026-01-27 13:44:36,234 | INFO     | mean y: 2538379.6070726914
[2026-01-27 08:45:27] 2026-01-27 13:44:36,235 | INFO     | intersect: -8999907398.238447
[2026-01-27 08:45:27] 2026-01-27 13:44:36,235 | INFO     | chi2: 3.687595095486424
[2026-01-27 08:45:27] 2026-01-27 13:44:36,236 | INFO     | sum of square deviations: 39696977688.569374
[2026-01-27 08:45:27] 2026-01-27 13:44:36,242 | INFO     | sum of deviations: 240996623059.41684
[2026-01-27 08:45:27] 2026-01-27 13:44:36,242 | INFO     | mean x: 1769505759.8194444
[2026-01-27 08:45:27] 2026-01-27 13:44:36,243 | INFO     | mean y: 2542556.2023809524
[2026-01-27 08:45:27] 2026-01-27 13:44:36,243 | INFO     | intersect: -10739960713.094797
[2026-01-27 08:45:27] 2026-01-27 13:44:36,243 | INFO     | chi2: 2.8698703463173
[2026-01-27 08:45:27] 2026-01-27 13:44:36,243 | INFO     | current chi2=2.8698703463173 (change=22.17501455542151 %)
[2026-01-27 08:45:27] 2026-01-27 13:44:36,243 | INFO     | right removable region: 503
[2026-01-27 08:45:27] 2026-01-27 13:44:36,244 | INFO     | sum of square deviations: 39696940478.56938
[2026-01-27 08:45:27] 2026-01-27 13:44:36,252 | INFO     | sum of deviations: 73287211121.59717
[2026-01-27 08:45:27] 2026-01-27 13:44:36,252 | INFO     | mean x: 1769506064.8194444
[2026-01-27 08:45:27] 2026-01-27 13:44:36,252 | INFO     | mean y: 2555566.347222222
[2026-01-27 08:45:27] 2026-01-27 13:44:36,252 | INFO     | intersect: -3264249456.6589937
[2026-01-27 08:45:27] 2026-01-27 13:44:36,253 | INFO     | chi2: 1.0319331428363892
[2026-01-27 08:45:27] 2026-01-27 13:44:36,253 | INFO     | current chi2=1.0319331428363892 (change=72.01609406359543 %)
[2026-01-27 08:45:27] 2026-01-27 13:44:36,254 | INFO     | sum of square deviations: 38527114380.69731
[2026-01-27 08:45:27] 2026-01-27 13:44:36,259 | INFO     | sum of deviations: 36756815375.83361
[2026-01-27 08:45:27] 2026-01-27 13:44:36,260 | INFO     | mean x: 1769506217.3206413
[2026-01-27 08:45:27] 2026-01-27 13:44:36,260 | INFO     | mean y: 2560323.3947895793
[2026-01-27 08:45:27] 2026-01-27 13:44:36,260 | INFO     | intersect: -1685638089.1245575
[2026-01-27 08:45:27] 2026-01-27 13:44:36,260 | INFO     | chi2: 0.86560709279249
[2026-01-27 08:45:27] 2026-01-27 13:44:36,260 | INFO     | current chi2=0.86560709279249 (change=16.117909498161136 %)
[2026-01-27 08:45:27] 2026-01-27 13:44:36,260 | INFO     | left removable region: 20
[2026-01-27 08:45:27] 2026-01-27 13:44:36,261 | INFO     | sum of square deviations: 34938513048.31484
[2026-01-27 08:45:27] 2026-01-27 13:44:36,265 | INFO     | sum of deviations: 54606842653.823975
[2026-01-27 08:45:27] 2026-01-27 13:44:36,266 | INFO     | mean x: 1769506339.3271222
[2026-01-27 08:45:27] 2026-01-27 13:44:36,266 | INFO     | mean y: 2566917.8302277434
[2026-01-27 08:45:27] 2026-01-27 13:44:36,266 | INFO     | intersect: -2763067501.4983516
[2026-01-27 08:45:27] 2026-01-27 13:44:36,266 | INFO     | chi2: 0.003988902883343502
[2026-01-27 08:45:27] 2026-01-27 13:44:36,266 | INFO     | current memory leak: 1.56 B/s (using 483 data points, chi2=0.00)
[2026-01-27 08:45:27] 2026-01-27 13:44:36,267 | INFO     | could have reported an average CPU frequency of 2978 MHz (21 samples)
[2026-01-27 08:45:27] 2026-01-27 13:44:36,267 | INFO     | ..............................
[2026-01-27 08:45:27] 2026-01-27 13:44:36,267 | INFO     | . Timing measurements:
[2026-01-27 08:45:27] 2026-01-27 13:44:36,267 | INFO     | . get job = 0 s
[2026-01-27 08:45:27] 2026-01-27 13:44:36,267 | INFO     | . initial setup = 41 s
[2026-01-27 08:45:27] 2026-01-27 13:44:36,268 | INFO     | . payload setup = 56 s
[2026-01-27 08:45:27] 2026-01-27 13:44:36,268 | INFO     | . stage-in = 0 s
[2026-01-27 08:45:27] 2026-01-27 13:44:36,268 | INFO     | . payload execution = 31086 s
[2026-01-27 08:45:27] 2026-01-27 13:44:36,268 | INFO     | . stage-out = 3 s
[2026-01-27 08:45:27] 2026-01-27 13:44:36,268 | INFO     | . log creation = 0 s
[2026-01-27 08:45:27] 2026-01-27 13:44:36,268 | INFO     | ..............................
[2026-01-27 08:45:27] 2026-01-27 13:44:36,784 | INFO     | 
[2026-01-27 08:45:27] 2026-01-27 13:44:36,785 | INFO     | job summary report
[2026-01-27 08:45:27] 2026-01-27 13:44:36,785 | INFO     | --------------------------------------------------
[2026-01-27 08:45:27] 2026-01-27 13:44:36,785 | INFO     | PanDA job id: 6984227277
[2026-01-27 08:45:27] 2026-01-27 13:44:36,785 | INFO     | task id: 48317952
[2026-01-27 08:45:27] 2026-01-27 13:44:36,785 | INFO     | errors: (none)
[2026-01-27 08:45:27] 2026-01-27 13:44:36,785 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 08:45:27] 2026-01-27 13:44:36,785 | INFO     | pilot state: finished 
[2026-01-27 08:45:27] 2026-01-27 13:44:36,785 | INFO     | transexitcode: 0
[2026-01-27 08:45:27] 2026-01-27 13:44:36,785 | INFO     | exeerrorcode: 0
[2026-01-27 08:45:27] 2026-01-27 13:44:36,785 | INFO     | exeerrordiag: 
[2026-01-27 08:45:27] 2026-01-27 13:44:36,785 | INFO     | exitcode: 0
[2026-01-27 08:45:27] 2026-01-27 13:44:36,785 | INFO     | exitmsg: OK
[2026-01-27 08:45:27] 2026-01-27 13:44:36,785 | INFO     | cpuconsumptiontime: 46830 s
[2026-01-27 08:45:27] 2026-01-27 13:44:36,785 | INFO     | nevents: 400
[2026-01-27 08:45:27] 2026-01-27 13:44:36,785 | INFO     | neventsw: 0
[2026-01-27 08:45:27] 2026-01-27 13:44:36,785 | INFO     | pid: 2747079
[2026-01-27 08:45:27] 2026-01-27 13:44:36,785 | INFO     | pgrp: 2747079
[2026-01-27 08:45:27] 2026-01-27 13:44:36,786 | INFO     | corecount: 9
[2026-01-27 08:45:27] 2026-01-27 13:44:36,786 | INFO     | event service: False
[2026-01-27 08:45:27] 2026-01-27 13:44:36,786 | INFO     | sizes: {0: 2283744, 1: 2283828, 2: 2250224, 3: 2284317, 31148: 2321523, 31151: 2330521, 31153: 2330705, 31156: 2330899}
[2026-01-27 08:45:27] 2026-01-27 13:44:36,786 | INFO     | --------------------------------------------------
[2026-01-27 08:45:27] 2026-01-27 13:44:36,786 | INFO     | 
[2026-01-27 08:45:27] 2026-01-27 13:44:36,786 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2026-01-27 08:45:27] 2026-01-27 13:44:36,895 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 08:45:27] 2026-01-27 13:44:36,895 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 08:45:27] 2026-01-27 13:44:36,895 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 08:45:27] 2026-01-27 13:44:36,896 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 08:45:27] 2026-01-27 13:44:36,896 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 08:45:27] 2026-01-27 13:44:36,896 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 08:45:27] 2026-01-27 13:44:36,896 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 08:45:27] 2026-01-27 13:44:36,896 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 08:45:27] 2026-01-27 13:44:36,896 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 08:45:27] 2026-01-27 13:44:36,896 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 08:45:27] 2026-01-27 13:44:36,896 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 08:45:27] 2026-01-27 13:44:36,896 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 08:45:27] 2026-01-27 13:44:36,896 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 08:45:27] 2026-01-27 13:44:36,896 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 08:45:27] 2026-01-27 13:44:36,896 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 08:45:27] 2026-01-27 13:44:36,896 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 08:45:27] 2026-01-27 13:44:36,896 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 08:45:27] 2026-01-27 13:44:36,897 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 08:45:27] 2026-01-27 13:44:36,897 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 08:45:27] 2026-01-27 13:44:36,897 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 08:45:27] 2026-01-27 13:44:36,897 | INFO     | job 6984227277 has completed (purged errors)
[2026-01-27 08:45:27] 2026-01-27 13:44:36,897 | INFO     | overall cleanup function is called
[2026-01-27 08:45:27] 2026-01-27 13:44:37,770 | WARNING  | process 2747079 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 08:45:27] 2026-01-27 13:44:38,143 | INFO     | --- collectZombieJob: --- 10, [2747079]
[2026-01-27 08:45:27] 2026-01-27 13:44:38,143 | INFO     | zombie collector waiting for pid 2747079
[2026-01-27 08:45:27] 2026-01-27 13:44:38,143 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 08:45:27] 2026-01-27 13:44:38,143 | INFO     | collected zombie processes
[2026-01-27 08:45:27] 2026-01-27 13:44:38,143 | INFO     | will attempt to kill all subprocesses of pid=2747079
[2026-01-27 08:45:27] 2026-01-27 13:44:43,479 | INFO     | PID=2718358 has CPU usage=15.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-27 08:45:27] 2026-01-27 13:44:43,479 | INFO     | .. there are 63 such processes running
[2026-01-27 08:45:27] 2026-01-27 13:44:43,509 | INFO     | using path: /tmp/boinchome/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 08:45:27] 2026-01-27 13:44:45,290 | INFO     | process IDs to be killed: [2747079] (in reverse order)
[2026-01-27 08:45:27] 2026-01-27 13:44:45,795 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 08:45:27] 2026-01-27 13:44:45,796 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 08:45:27] 2026-01-27 13:44:45,832 | INFO     | did not find any defunct processes belonging to 2747079
[2026-01-27 08:45:27] 2026-01-27 13:44:45,891 | INFO     | did not find any defunct processes belonging to 2747079
[2026-01-27 08:45:27] 2026-01-27 13:44:45,892 | INFO     | ready for new job
[2026-01-27 08:45:27] 2026-01-27 13:44:45,892 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 08:45:27] 2026-01-27 13:44:45,894 | INFO     | **************************************
[2026-01-27 08:45:27] 2026-01-27 13:44:45,895 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 08:45:27] 2026-01-27 13:44:45,895 | INFO     | **************************************
[2026-01-27 08:45:27] 2026-01-27 13:44:45,895 | INFO     | 
[2026-01-27 08:45:27] 2026-01-27 13:44:45,902 | INFO     | architecture information:
[2026-01-27 08:45:27] 2026-01-27 13:44:45,906 | INFO     | executing command: cat /etc/os-release
[2026-01-27 08:45:27] 2026-01-27 13:44:46,023 | INFO     | cat /etc/os-release:
[2026-01-27 08:45:27] NAME="CentOS Linux"
[2026-01-27 08:45:27] VERSION="7 (Core)"
[2026-01-27 08:45:27] ID="centos"
[2026-01-27 08:45:27] ID_LIKE="rhel fedora"
[2026-01-27 08:45:27] VERSION_ID="7"
[2026-01-27 08:45:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 08:45:27] ANSI_COLOR="0;31"
[2026-01-27 08:45:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 08:45:27] HOME_URL="https://www.centos.org/"
[2026-01-27 08:45:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 08:45:27] 
[2026-01-27 08:45:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 08:45:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 08:45:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 08:45:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 08:45:27] 
[2026-01-27 08:45:27] 2026-01-27 13:44:46,023 | INFO     | **************************************
[2026-01-27 08:45:27] 2026-01-27 13:44:46,485 | INFO     | number of running child processes to parent process 2747079: 1
[2026-01-27 08:45:27] 2026-01-27 13:44:46,485 | INFO     | maximum number of monitored processes: 6
[2026-01-27 08:45:27] 2026-01-27 13:44:46,486 | INFO     | aborting job monitoring since job object (job id=6984227277) has expired
[2026-01-27 08:45:27] 2026-01-27 13:44:46,527 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-01-27 08:45:27] 2026-01-27 13:44:46,587 | INFO     | sufficient remaining disk space (73998008320 B)
[2026-01-27 08:45:27] 2026-01-27 13:44:46,588 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 08:45:27] 2026-01-27 13:44:46,588 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 08:45:27] 2026-01-27 13:44:46,588 | INFO     | update_server=False
[2026-01-27 08:45:27] 2026-01-27 13:44:46,588 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 08:45:27] 2026-01-27 13:44:46,590 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 08:45:27] 2026-01-27 13:44:46,590 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 08:45:27] 2026-01-27 13:44:46,591 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 08:45:27] 2026-01-27 13:44:46,591 | INFO     | will abort loop
[2026-01-27 08:45:27] 2026-01-27 13:44:46,670 | INFO     | all data control threads have been joined
[2026-01-27 08:45:27] 2026-01-27 13:44:47,595 | INFO     | [job] retrieve thread has finished
[2026-01-27 08:45:27] 2026-01-27 13:44:47,596 | INFO     | [job] queue monitor thread has finished
[2026-01-27 08:45:27] 2026-01-27 13:44:47,597 | INFO     | [job] job monitor thread has finished
[2026-01-27 08:45:27] 2026-01-27 13:44:47,676 | INFO     | [data] control thread has finished
[2026-01-27 08:45:27] 2026-01-27 13:44:47,815 | INFO     | all job control threads have been joined
[2026-01-27 08:45:27] 2026-01-27 13:44:47,998 | INFO     | all payload control threads have been joined
[2026-01-27 08:45:27] 2026-01-27 13:44:48,110 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 08:45:27] 2026-01-27 13:44:48,110 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 08:45:27] 2026-01-27 13:44:48,336 | INFO     | [payload] validate_post thread has finished
[2026-01-27 08:45:27] 2026-01-27 13:44:48,543 | INFO     | [payload] failed_post thread has finished
[2026-01-27 08:45:27] 2026-01-27 13:44:48,610 | INFO     | [data] copytool_out thread has finished
[2026-01-27 08:45:27] 2026-01-27 13:44:48,735 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 08:45:27] 2026-01-27 13:44:48,735 | INFO     | [data] copytool_in thread has finished
[2026-01-27 08:45:27] 2026-01-27 13:44:48,821 | INFO     | [job] control thread has finished
[2026-01-27 08:45:27] 2026-01-27 13:44:48,909 | INFO     | [job] validate thread has finished
[2026-01-27 08:45:27] 2026-01-27 13:44:49,004 | INFO     | [payload] control thread has finished
[2026-01-27 08:45:27] 2026-01-27 13:44:49,920 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 08:45:27] 2026-01-27 13:44:53,992 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 08:45:27] 2026-01-27 13:44:56,878 | INFO     | job.realtimelogging is not enabled
[2026-01-27 08:45:27] 2026-01-27 13:44:57,884 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 08:45:27] 2026-01-27 13:45:17,151 | INFO     | PID=2718358 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 08:45:27] 2026-01-27 13:45:17,151 | INFO     | .. there are 63 such processes running
[2026-01-27 08:45:27] 2026-01-27 13:45:17,152 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 08:45:27] 2026-01-27 13:45:17,152 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 08:45:27] 2026-01-27 13:45:17,152 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 08:45:27] 2026-01-27 13:45:18,668 | INFO     | [monitor] cgroup control has ended
[2026-01-27 08:45:27] 2026-01-27 13:45:20,087 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140398050416448)>', '<ExcThread(monitor, started 140397556778752)>']
[2026-01-27 08:45:27] 2026-01-27 13:45:20,185 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 08:45:27] 2026-01-27 13:45:20,185 | INFO     | [monitor] control thread has ended
[2026-01-27 08:45:27] 2026-01-27 13:45:25,113 | INFO     | all workflow threads have been joined
[2026-01-27 08:45:27] 2026-01-27 13:45:25,113 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 08:45:27] 2026-01-27 13:45:25,113 | INFO     | traces error code: 0
[2026-01-27 08:45:27] 2026-01-27 13:45:25,113 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 08:45:27] 2026-01-27 13:45:25,687 [wrapper] ==== pilot stdout END ====
[2026-01-27 08:45:27] 2026-01-27 13:45:25,698 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 08:45:27] 2026-01-27 13:45:25,722 [wrapper] pilotpid: 2718358
[2026-01-27 08:45:27] 2026-01-27 13:45:25,740 [wrapper] Pilot exit status: 0
[2026-01-27 08:45:27] 2026-01-27 13:45:25,857 [wrapper] pandaids: 6984227277
[2026-01-27 08:45:27] 2026-01-27 13:45:26,774 [wrapper] cleanup supervisor_pilot 2697356 2718359
[2026-01-27 08:45:27] 2026-01-27 13:45:26,808 [wrapper] Test setup, not cleaning
[2026-01-27 08:45:27] 2026-01-27 13:45:26,842 [wrapper] apfmon messages muted
[2026-01-27 08:45:27] 2026-01-27 13:45:26,879 [wrapper] ==== wrapper stdout END ====
[2026-01-27 08:45:27] 2026-01-27 13:45:26,910 [wrapper] ==== wrapper stderr END ====
[2026-01-27 08:45:27]  *** Error codes and diagnostics ***
[2026-01-27 08:45:27]     "exeErrorCode": 0,
[2026-01-27 08:45:27]     "exeErrorDiag": "",
[2026-01-27 08:45:27]     "pilotErrorCode": 0,
[2026-01-27 08:45:27]     "pilotErrorDiag": "",
[2026-01-27 08:45:27]  *** Listing of results directory ***
[2026-01-27 08:45:27] total 684108
[2026-01-27 08:45:27] -rw-r--r--. 1 boincer umatlas    584422 Jan 26 04:48 pilot3.tar.gz
[2026-01-27 08:45:27] -rwx------. 1 boincer umatlas     36322 Jan 26 04:49 runpilot2-wrapper.sh
[2026-01-27 08:45:27] -rw-r--r--. 1 boincer umatlas      5111 Jan 26 04:50 queuedata.json
[2026-01-27 08:45:27] -rw-r--r--. 1 boincer umatlas       100 Jan 27 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 08:45:27] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 27 00:03 run_atlas
[2026-01-27 08:45:27] -rw-r--r--. 1 boincer umatlas       105 Jan 27 00:03 job.xml
[2026-01-27 08:45:27] -rw-r--r--. 2 boincer umatlas 500422950 Jan 27 00:03 EVNT.48317949._000017.pool.root.1
[2026-01-27 08:45:27] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 00:03 start_atlas.sh
[2026-01-27 08:45:27] drwxrwx--x. 2 boincer umatlas      4096 Jan 27 00:03 shared
[2026-01-27 08:45:27] -rw-r--r--. 2 boincer umatlas    597750 Jan 27 00:03 input.tar.gz
[2026-01-27 08:45:27] -rw-r--r--. 1 boincer umatlas         0 Jan 27 00:03 boinc_lockfile
[2026-01-27 08:45:27] -rw-r--r--. 1 boincer umatlas      2517 Jan 27 00:03 pandaJob.out
[2026-01-27 08:45:27] -rw-------. 1 boincer umatlas        57 Jan 27 00:03 setup.sh.local
[2026-01-27 08:45:27] -rw-------. 1 boincer umatlas   1006441 Jan 27 00:04 agis_schedconf.cvmfs.json
[2026-01-27 08:45:27] -rw-------. 1 boincer umatlas       439 Jan 27 00:05 workernode_map.json
[2026-01-27 08:45:27] drwx------. 5 boincer umatlas      4096 Jan 27 00:05 pilot3
[2026-01-27 08:45:27] -rw-r--r--. 1 boincer umatlas      6840 Jan 27 08:40 init_data.xml
[2026-01-27 08:45:27] -rw-------. 1 boincer umatlas 188312232 Jan 27 08:43 HITS.48317952._000855.pool.root.1
[2026-01-27 08:45:27] -rw-r--r--. 1 boincer umatlas       532 Jan 27 08:43 boinc_task_state.xml
[2026-01-27 08:45:27] -rw-------. 1 boincer umatlas      1043 Jan 27 08:44 memory_monitor_summary.json
[2026-01-27 08:45:27] -rw-------. 1 boincer umatlas   1516246 Jan 27 08:44 agis_ddmendpoints.agis.ALL.json
[2026-01-27 08:45:27] -rw-------. 1 boincer umatlas    661076 Jan 27 08:44 log.48317952._000855.job.log.tgz.1
[2026-01-27 08:45:27] -rw-------. 1 boincer umatlas      6378 Jan 27 08:44 heartbeat.json
[2026-01-27 08:45:27] -rw-------. 1 boincer umatlas        95 Jan 27 08:45 pilot_heartbeat.json
[2026-01-27 08:45:27] -rw-------. 1 boincer umatlas      5182 Jan 27 08:45 pilotlog.txt
[2026-01-27 08:45:27] -rw-r--r--. 1 boincer umatlas      8192 Jan 27 08:45 boinc_mmap_file
[2026-01-27 08:45:27] -rw-r--r--. 1 boincer umatlas        27 Jan 27 08:45 wrapper_checkpoint.txt
[2026-01-27 08:45:27] -rw-------. 1 boincer umatlas   3258575 Jan 27 08:45 log.48317952._000855.job.log.1
[2026-01-27 08:45:27] -rw-------. 1 boincer umatlas       357 Jan 27 08:45 output.list
[2026-01-27 08:45:27] -rw-r--r--. 1 boincer umatlas       620 Jan 27 08:45 runtime_log
[2026-01-27 08:45:27] -rw-------. 1 boincer umatlas   3942400 Jan 27 08:45 result.tar.gz
[2026-01-27 08:45:27] -rw-r--r--. 1 boincer umatlas      9332 Jan 27 08:45 runtime_log.err
[2026-01-27 08:45:27] -rw-------. 1 boincer umatlas       656 Jan 27 08:45 dnJMDmTPY48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmed9KDmOF9BCn.diag
[2026-01-27 08:45:27] -rw-r--r--. 1 boincer umatlas     21403 Jan 27 08:45 stderr.txt
[2026-01-27 08:45:27] HITS file was successfully produced:
[2026-01-27 08:45:27] -rw-------. 1 boincer umatlas 188312232 Jan 27 08:43 shared/HITS.pool.root.1
[2026-01-27 08:45:27]  *** Contents of shared directory: ***
[2026-01-27 08:45:27] total 677056
[2026-01-27 08:45:27] -rw-r--r--. 2 boincer umatlas 500422950 Jan 27 00:03 ATLAS.root_0
[2026-01-27 08:45:27] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 00:03 start_atlas.sh
[2026-01-27 08:45:27] -rw-r--r--. 2 boincer umatlas    597750 Jan 27 00:03 input.tar.gz
[2026-01-27 08:45:27] -rw-------. 1 boincer umatlas 188312232 Jan 27 08:43 HITS.pool.root.1
[2026-01-27 08:45:27] -rw-------. 1 boincer umatlas   3942400 Jan 27 08:45 result.tar.gz
08:45:28 (2700897): run_atlas exited; CPU time 48413.154849
08:45:28 (2700897): called boinc_finish(0)

</stderr_txt>
]]>

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