Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:00 (624076): wrapper (7.7.26015): starting
00:03:00 (624076): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 00:03:00] Arguments: --nthreads 8
[2026-01-27 00:03:00] Threads: 8
[2026-01-27 00:03:00] Checking for CVMFS
[2026-01-27 00:03:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 00:03:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 00:03:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 00:03:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 00:03:04] 2.13.3.0 10819 117451 232292 155573 1 374 28510230 32935937 21394 16776704 0 548983913 99.713 404089196 33458 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-27 00:03:04] CVMFS is ok
[2026-01-27 00:03:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 00:03:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 00:03:04] Further information can be found at the LHC@home message board.
[2026-01-27 00:03:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 00:03:04] Checking for apptainer binary...
[2026-01-27 00:03:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 00:03:04] Running /usr/bin/apptainer --version
[2026-01-27 00:03:04] apptainer version 1.4.5-2.el9
[2026-01-27 00:03:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 00:03:05] c-8-37.aglt2.org
[2026-01-27 00:03:05] apptainer works
[2026-01-27 00:03:05] Set ATHENA_PROC_NUMBER=8
[2026-01-27 00:03:05] Set ATHENA_CORE_NUMBER=8
[2026-01-27 00:03:05] Starting ATLAS job with PandaID=6984227287
[2026-01-27 00:03:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 00:00:28]  *** The last 200 lines of the pilot log: ***
[2026-01-28 00:00:29] 2026-01-27 13:35:54,460 | INFO     | sum of square deviations: 36484422435.977646
[2026-01-28 00:00:29] 2026-01-27 13:35:54,594 | INFO     | sum of deviations: 172962113604.62628
[2026-01-28 00:00:29] 2026-01-27 13:35:54,595 | INFO     | mean x: 1769505951.2673469
[2026-01-28 00:00:29] 2026-01-27 13:35:54,595 | INFO     | mean y: 2488316.720408163
[2026-01-28 00:00:29] 2026-01-27 13:35:54,595 | INFO     | intersect: -8386228536.4579735
[2026-01-28 00:00:29] 2026-01-27 13:35:54,614 | INFO     | chi2: 1.0767530064764614
[2026-01-28 00:00:29] 2026-01-27 13:35:54,614 | INFO     | current chi2=1.0767530064764614 (change=51.175522963140196 %)
[2026-01-28 00:00:29] 2026-01-27 13:35:54,615 | INFO     | sum of square deviations: 35378512598.99793
[2026-01-28 00:00:29] 2026-01-27 13:35:55,076 | INFO     | sum of deviations: 113404087439.3506
[2026-01-28 00:00:29] 2026-01-27 13:35:55,076 | INFO     | mean x: 1769506103.8020618
[2026-01-28 00:00:29] 2026-01-27 13:35:55,076 | INFO     | mean y: 2496531.649484536
[2026-01-28 00:00:29] 2026-01-27 13:35:55,076 | INFO     | intersect: -5669568520.78908
[2026-01-28 00:00:29] 2026-01-27 13:35:55,077 | INFO     | chi2: 0.5940541853615557
[2026-01-28 00:00:29] 2026-01-27 13:35:55,077 | INFO     | current chi2=0.5940541853615557 (change=44.829112917406825 %)
[2026-01-28 00:00:29] 2026-01-27 13:35:55,078 | INFO     | sum of square deviations: 34295161445.324986
[2026-01-28 00:00:29] 2026-01-27 13:35:55,219 | INFO     | monitor loop #1213: job 0:6984227287 is in state 'finished'
[2026-01-28 00:00:29] 2026-01-27 13:35:55,219 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-28 00:00:29] 2026-01-27 13:35:55,379 | INFO     | sum of deviations: 55885404393.024994
[2026-01-28 00:00:29] 2026-01-27 13:35:55,379 | INFO     | mean x: 1769506256.3375
[2026-01-28 00:00:29] 2026-01-27 13:35:55,379 | INFO     | mean y: 2504628.154166667
[2026-01-28 00:00:29] 2026-01-27 13:35:55,379 | INFO     | intersect: -2880980054.344369
[2026-01-28 00:00:29] 2026-01-27 13:35:55,440 | INFO     | chi2: 0.12586121881740694
[2026-01-28 00:00:29] 2026-01-27 13:35:55,441 | INFO     | current chi2=0.12586121881740694 (change=78.81317530979017 %)
[2026-01-28 00:00:29] 2026-01-27 13:35:55,441 | INFO     | sum of square deviations: 33234077350.917786
[2026-01-28 00:00:29] 2026-01-27 13:35:55,542 | INFO     | sum of deviations: 29372547824.66524
[2026-01-28 00:00:29] 2026-01-27 13:35:55,630 | INFO     | mean x: 1769506408.8778946
[2026-01-28 00:00:29] 2026-01-27 13:35:55,630 | INFO     | mean y: 2508429.425263158
[2026-01-28 00:00:29] 2026-01-27 13:35:55,630 | INFO     | intersect: -1561395724.4952993
[2026-01-28 00:00:29] 2026-01-27 13:35:55,631 | INFO     | chi2: 0.004763380861947193
[2026-01-28 00:00:29] 2026-01-27 13:35:55,631 | INFO     | current chi2=0.004763380861947193 (change=96.21537046382996 %)
[2026-01-28 00:00:29] 2026-01-27 13:35:55,632 | INFO     | sum of square deviations: 32195231233.565983
[2026-01-28 00:00:29] 2026-01-27 13:35:55,847 | INFO     | sum of deviations: 25642068477.43405
[2026-01-28 00:00:29] 2026-01-27 13:35:55,847 | INFO     | mean x: 1769506561.4085107
[2026-01-28 00:00:29] 2026-01-27 13:35:55,848 | INFO     | mean y: 2508976.5914893616
[2026-01-28 00:00:29] 2026-01-27 13:35:55,848 | INFO     | intersect: -1406824228.370873
[2026-01-28 00:00:29] 2026-01-27 13:35:55,848 | INFO     | chi2: 0.0034320517335639485
[2026-01-28 00:00:29] 2026-01-27 13:35:55,849 | INFO     | current chi2=0.0034320517335639485 (change=27.94924795996721 %)
[2026-01-28 00:00:29] 2026-01-27 13:35:55,849 | INFO     | sum of square deviations: 31178246598.31375
[2026-01-28 00:00:29] 2026-01-27 13:35:55,941 | INFO     | sum of deviations: 23245138687.361286
[2026-01-28 00:00:29] 2026-01-27 13:35:55,941 | INFO     | mean x: 1769506713.939785
[2026-01-28 00:00:29] 2026-01-27 13:35:55,941 | INFO     | mean y: 2509336.0129032256
[2026-01-28 00:00:29] 2026-01-27 13:35:55,941 | INFO     | intersect: -1316757571.5742557
[2026-01-28 00:00:29] 2026-01-27 13:35:55,942 | INFO     | chi2: 0.0030194773916145706
[2026-01-28 00:00:29] 2026-01-27 13:35:55,942 | INFO     | current chi2=0.0030194773916145706 (change=12.021215703556656 %)
[2026-01-28 00:00:29] 2026-01-27 13:35:55,942 | INFO     | left removable region: 70
[2026-01-28 00:00:29] 2026-01-27 13:35:55,943 | INFO     | sum of square deviations: 23636111176.525814
[2026-01-28 00:00:29] 2026-01-27 13:35:55,951 | INFO     | sum of deviations: 18500801238.240566
[2026-01-28 00:00:29] 2026-01-27 13:35:55,951 | INFO     | mean x: 1769507598.5589623
[2026-01-28 00:00:29] 2026-01-27 13:35:55,951 | INFO     | mean y: 2509782.9103773586
[2026-01-28 00:00:29] 2026-01-27 13:35:55,951 | INFO     | intersect: -1382544980.3710196
[2026-01-28 00:00:29] 2026-01-27 13:35:55,955 | INFO     | chi2: 0.00209722238324063
[2026-01-28 00:00:29] 2026-01-27 13:35:55,956 | INFO     | current memory leak: 0.78 B/s (using 424 data points, chi2=0.00)
[2026-01-28 00:00:29] 2026-01-27 13:35:55,956 | INFO     | could have reported an average CPU frequency of 2599 MHz (20 samples)
[2026-01-28 00:00:29] 2026-01-27 13:35:55,957 | INFO     | ..............................
[2026-01-28 00:00:29] 2026-01-27 13:35:55,957 | INFO     | . Timing measurements:
[2026-01-28 00:00:29] 2026-01-27 13:35:55,957 | INFO     | . get job = 0 s
[2026-01-28 00:00:29] 2026-01-27 13:35:55,957 | INFO     | . initial setup = 41 s
[2026-01-28 00:00:29] 2026-01-27 13:35:55,957 | INFO     | . payload setup = 68 s
[2026-01-28 00:00:29] 2026-01-27 13:35:55,957 | INFO     | . stage-in = 1 s
[2026-01-28 00:00:29] 2026-01-27 13:35:55,957 | INFO     | . payload execution = 30533 s
[2026-01-28 00:00:29] 2026-01-27 13:35:55,957 | INFO     | . stage-out = 16 s
[2026-01-28 00:00:29] 2026-01-27 13:35:55,957 | INFO     | . log creation = 0 s
[2026-01-28 00:00:29] 2026-01-27 13:35:55,957 | INFO     | ..............................
[2026-01-28 00:00:29] 2026-01-27 13:35:56,316 | INFO     | 
[2026-01-28 00:00:29] 2026-01-27 13:35:56,316 | INFO     | job summary report
[2026-01-28 00:00:29] 2026-01-27 13:35:56,316 | INFO     | --------------------------------------------------
[2026-01-28 00:00:29] 2026-01-27 13:35:56,316 | INFO     | PanDA job id: 6984227287
[2026-01-28 00:00:29] 2026-01-27 13:35:56,316 | INFO     | task id: 48317952
[2026-01-28 00:00:29] 2026-01-27 13:35:56,316 | INFO     | errors: (none)
[2026-01-28 00:00:29] 2026-01-27 13:35:56,317 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 00:00:29] 2026-01-27 13:35:56,317 | INFO     | pilot state: finished 
[2026-01-28 00:00:29] 2026-01-27 13:35:56,317 | INFO     | transexitcode: 0
[2026-01-28 00:00:29] 2026-01-27 13:35:56,317 | INFO     | exeerrorcode: 0
[2026-01-28 00:00:29] 2026-01-27 13:35:56,317 | INFO     | exeerrordiag: 
[2026-01-28 00:00:29] 2026-01-27 13:35:56,317 | INFO     | exitcode: 0
[2026-01-28 00:00:29] 2026-01-27 13:35:56,317 | INFO     | exitmsg: OK
[2026-01-28 00:00:29] 2026-01-27 13:35:56,317 | INFO     | cpuconsumptiontime: 53338 s
[2026-01-28 00:00:29] 2026-01-27 13:35:56,317 | INFO     | nevents: 400
[2026-01-28 00:00:29] 2026-01-27 13:35:56,317 | INFO     | neventsw: 0
[2026-01-28 00:00:29] 2026-01-27 13:35:56,317 | INFO     | pid: 667529
[2026-01-28 00:00:29] 2026-01-27 13:35:56,318 | INFO     | pgrp: 667529
[2026-01-28 00:00:29] 2026-01-27 13:35:56,318 | INFO     | corecount: 8
[2026-01-28 00:00:29] 2026-01-27 13:35:56,318 | INFO     | event service: False
[2026-01-28 00:00:29] 2026-01-27 13:35:56,318 | INFO     | sizes: {0: 2283143, 1: 2283744, 2: 2283828, 4: 2283884, 5: 2261353, 7: 2284373, 8: 2284529, 30613: 2321201, 30616: 2321200, 30634: 2330254, 30638: 2330310, 30646: 
[2026-01-28 00:00:29] 2026-01-27 13:35:56,318 | INFO     | --------------------------------------------------
[2026-01-28 00:00:29] 2026-01-27 13:35:56,318 | INFO     | 
[2026-01-28 00:00:29] 2026-01-27 13:35:56,318 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-28 00:00:29] 2026-01-27 13:35:56,841 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 00:00:29] 2026-01-27 13:35:56,841 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 00:00:29] 2026-01-27 13:35:56,841 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 00:00:29] 2026-01-27 13:35:56,842 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 00:00:29] 2026-01-27 13:35:56,842 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 00:00:29] 2026-01-27 13:35:56,842 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 00:00:29] 2026-01-27 13:35:56,842 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 00:00:29] 2026-01-27 13:35:56,842 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 00:00:29] 2026-01-27 13:35:56,842 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 00:00:29] 2026-01-27 13:35:56,842 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 00:00:29] 2026-01-27 13:35:56,842 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 00:00:29] 2026-01-27 13:35:56,842 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 00:00:29] 2026-01-27 13:35:56,842 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 00:00:29] 2026-01-27 13:35:56,843 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 00:00:29] 2026-01-27 13:35:56,843 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 00:00:29] 2026-01-27 13:35:56,843 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 00:00:29] 2026-01-27 13:35:56,843 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 00:00:29] 2026-01-27 13:35:56,843 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 00:00:29] 2026-01-27 13:35:56,843 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 00:00:29] 2026-01-27 13:35:56,843 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 00:00:29] 2026-01-27 13:35:56,843 | INFO     | job 6984227287 has completed (purged errors)
[2026-01-28 00:00:29] 2026-01-27 13:35:56,844 | INFO     | overall cleanup function is called
[2026-01-28 00:00:29] 2026-01-27 13:35:58,037 | INFO     | --- collectZombieJob: --- 10, [667529]
[2026-01-28 00:00:29] 2026-01-27 13:35:58,037 | INFO     | zombie collector waiting for pid 667529
[2026-01-28 00:00:29] 2026-01-27 13:35:58,037 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 00:00:29] 2026-01-27 13:35:58,037 | INFO     | collected zombie processes
[2026-01-28 00:00:29] 2026-01-27 13:35:58,037 | INFO     | will attempt to kill all subprocesses of pid=667529
[2026-01-28 00:00:29] 2026-01-27 13:36:04,732 | INFO     | PID=641460 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-28 00:00:29] 2026-01-27 13:36:04,732 | INFO     | .. there are 36 such processes running
[2026-01-28 00:00:29] 2026-01-27 13:36:06,079 | INFO     | process IDs to be killed: [667529] (in reverse order)
[2026-01-28 00:00:29] 2026-01-27 13:36:06,493 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 00:00:29] 2026-01-27 13:36:06,493 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 00:00:29] 2026-01-27 13:36:06,782 | INFO     | did not find any defunct processes belonging to 667529
[2026-01-28 00:00:29] 2026-01-27 13:36:07,404 | INFO     | did not find any defunct processes belonging to 667529
[2026-01-28 00:00:29] 2026-01-27 13:36:07,405 | INFO     | ready for new job
[2026-01-28 00:00:29] 2026-01-27 13:36:07,405 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 00:00:29] 2026-01-27 13:36:07,536 | INFO     | **************************************
[2026-01-28 00:00:29] 2026-01-27 13:36:07,536 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 00:00:29] 2026-01-27 13:36:07,536 | INFO     | **************************************
[2026-01-28 00:00:29] 2026-01-27 13:36:07,536 | INFO     | 
[2026-01-28 00:00:29] 2026-01-27 13:36:07,538 | INFO     | architecture information:
[2026-01-28 00:00:29] 2026-01-27 13:36:07,821 | INFO     | executing command: cat /etc/os-release
[2026-01-28 00:00:29] 2026-01-27 13:36:08,332 | INFO     | cat /etc/os-release:
[2026-01-28 00:00:29] NAME="CentOS Linux"
[2026-01-28 00:00:29] VERSION="7 (Core)"
[2026-01-28 00:00:29] ID="centos"
[2026-01-28 00:00:29] ID_LIKE="rhel fedora"
[2026-01-28 00:00:29] VERSION_ID="7"
[2026-01-28 00:00:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 00:00:29] ANSI_COLOR="0;31"
[2026-01-28 00:00:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 00:00:29] HOME_URL="https://www.centos.org/"
[2026-01-28 00:00:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 00:00:29] 
[2026-01-28 00:00:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 00:00:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 00:00:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 00:00:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 00:00:29] 
[2026-01-28 00:00:29] 2026-01-27 13:36:08,332 | INFO     | **************************************
[2026-01-28 00:00:29] 2026-01-27 13:36:08,836 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-28 00:00:29] 2026-01-27 13:36:09,047 | INFO     | sufficient remaining disk space (73251422208 B)
[2026-01-28 00:00:29] 2026-01-27 13:36:09,047 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 00:00:29] 2026-01-27 13:36:09,048 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 00:00:29] 2026-01-27 13:36:09,048 | INFO     | update_server=False
[2026-01-28 00:00:29] 2026-01-27 13:36:09,048 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 00:00:29] 2026-01-27 13:36:09,069 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 00:00:29] 2026-01-27 13:36:09,716 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 00:00:29] 2026-01-27 13:36:09,716 | INFO     | aborting loop
[2026-01-28 00:00:29] 2026-01-27 13:36:09,838 | INFO     | all payload control threads have been joined
[2026-01-28 00:00:29] 2026-01-27 13:36:09,949 | INFO     | all job control threads have been joined
[2026-01-28 00:00:29] 2026-01-27 13:36:09,952 | INFO     | all data control threads have been joined
[2026-01-28 00:00:29] 2026-01-27 13:36:10,054 | INFO     | [job] retrieve thread has finished
[2026-01-28 00:00:29] 2026-01-27 13:36:10,184 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 00:00:29] 2026-01-27 13:36:10,328 | INFO     | [job] validate thread has finished
[2026-01-28 00:00:29] 2026-01-27 13:36:10,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 00:00:29] 2026-01-27 13:36:10,723 | INFO     | [job] job monitor thread has finished
[2026-01-28 00:00:29] 2026-01-27 13:36:10,844 | INFO     | [payload] control thread has finished
[2026-01-28 00:00:29] 2026-01-27 13:36:10,915 | INFO     | [payload] failed_post thread has finished
[2026-01-28 00:00:29] 2026-01-27 13:36:10,950 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 00:00:29] 2026-01-27 13:36:10,955 | INFO     | [job] control thread has finished
[2026-01-28 00:00:29] 2026-01-27 13:36:10,961 | INFO     | [data] control thread has finished
[2026-01-28 00:00:29] 2026-01-27 13:36:11,076 | INFO     | [data] copytool_out thread has finished
[2026-01-28 00:00:29] 2026-01-27 13:36:11,204 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 00:00:29] 2026-01-27 13:36:11,204 | INFO     | [data] copytool_in thread has finished
[2026-01-28 00:00:29] 2026-01-27 13:36:11,205 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 00:00:29] 2026-01-27 13:36:11,205 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 00:00:29] 2026-01-27 13:36:11,230 | INFO     | [job] queue monitor thread has finished
[2026-01-28 00:00:29] 2026-01-27 13:36:11,430 | INFO     | [payload] validate_post thread has finished
[2026-01-28 00:00:29] 2026-01-27 13:36:13,058 | INFO     | [monitor] cgroup control has ended
[2026-01-28 00:00:29] 2026-01-27 13:36:14,722 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 00:00:29] 2026-01-27 13:36:15,485 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139875684144960)>', '<ExcThread(monitor, started 139875055556352)>']
[2026-01-28 00:00:29] 2026-01-27 13:36:20,511 | INFO     | all workflow threads have been joined
[2026-01-28 00:00:29] 2026-01-27 13:36:20,511 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 00:00:29] 2026-01-27 13:36:20,511 | INFO     | traces error code: 0
[2026-01-28 00:00:29] 2026-01-27 13:36:20,511 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 00:00:29] 2026-01-27 13:36:43,357 | INFO     | PID=641460 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-28 00:00:29] 2026-01-27 13:36:43,358 | INFO     | .. there are 36 such processes running
[2026-01-28 00:00:29] 2026-01-27 13:36:43,358 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 00:00:29] 2026-01-27 13:36:43,358 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 00:00:29] 2026-01-27 13:36:43,358 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 00:00:29] 2026-01-27 13:36:43,429 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 00:00:29] 2026-01-27 13:36:43,429 | INFO     | [monitor] control thread has ended
[2026-01-28 00:00:29] 2026-01-27 13:36:50,012 [wrapper] ==== pilot stdout END ====
[2026-01-28 00:00:29] 2026-01-27 13:36:50,017 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 00:00:29] 2026-01-27 13:36:50,023 [wrapper] pilotpid: 641460
[2026-01-28 00:00:29] 2026-01-27 13:36:50,029 [wrapper] Pilot exit status: 0
[2026-01-28 00:00:29] 2026-01-27 13:36:50,153 [wrapper] pandaids: 6984227287
[2026-01-28 00:00:29] 2026-01-27 13:36:50,278 [wrapper] cleanup supervisor_pilot 2883311 641461
[2026-01-28 00:00:29] 2026-01-27 13:36:50,284 [wrapper] Test setup, not cleaning
[2026-01-28 00:00:29] 2026-01-27 13:36:50,290 [wrapper] apfmon messages muted
[2026-01-28 00:00:29] 2026-01-27 13:36:50,294 [wrapper] ==== wrapper stdout END ====
[2026-01-28 00:00:29] 2026-01-27 13:36:50,319 [wrapper] ==== wrapper stderr END ====
[2026-01-28 00:00:29]  *** Error codes and diagnostics ***
[2026-01-28 00:00:29]     "exeErrorCode": 0,
[2026-01-28 00:00:29]     "exeErrorDiag": "",
[2026-01-28 00:00:29]     "pilotErrorCode": 0,
[2026-01-28 00:00:29]     "pilotErrorDiag": "",
[2026-01-28 00:00:29]  *** Listing of results directory ***
[2026-01-28 00:00:29] total 679304
[2026-01-28 00:00:29] -rw-r--r--. 1 boincer umatlas    584422 Jan 26 04:48 pilot3.tar.gz
[2026-01-28 00:00:29] -rwx------. 1 boincer umatlas     36322 Jan 26 04:49 runpilot2-wrapper.sh
[2026-01-28 00:00:29] -rw-r--r--. 1 boincer umatlas      5111 Jan 26 04:50 queuedata.json
[2026-01-28 00:00:29] -rw-r--r--. 1 boincer umatlas       100 Jan 27 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 00:00:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 27 00:02 run_atlas
[2026-01-28 00:00:29] -rw-r--r--. 1 boincer umatlas       105 Jan 27 00:02 job.xml
[2026-01-28 00:00:29] -rw-r--r--. 2 boincer umatlas 500422950 Jan 27 00:03 EVNT.48317949._000017.pool.root.1
[2026-01-28 00:00:29] -rw-r--r--. 2 boincer umatlas    597751 Jan 27 00:03 input.tar.gz
[2026-01-28 00:00:29] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 00:03 start_atlas.sh
[2026-01-28 00:00:29] drwxrwx--x. 2 boincer umatlas      4096 Jan 27 00:03 shared
[2026-01-28 00:00:29] -rw-r--r--. 1 boincer umatlas         0 Jan 27 00:03 boinc_lockfile
[2026-01-28 00:00:29] -rw-r--r--. 1 boincer umatlas      2517 Jan 27 00:03 pandaJob.out
[2026-01-28 00:00:29] -rw-------. 1 boincer umatlas        57 Jan 27 00:03 setup.sh.local
[2026-01-28 00:00:29] -rw-------. 1 boincer umatlas   1006441 Jan 27 00:04 agis_schedconf.cvmfs.json
[2026-01-28 00:00:29] -rw-------. 1 boincer umatlas       440 Jan 27 00:04 workernode_map.json
[2026-01-28 00:00:29] drwx------. 5 boincer umatlas      4096 Jan 27 00:05 pilot3
[2026-01-28 00:00:29] -rw-------. 1 boincer umatlas 184172977 Jan 27 08:34 HITS.48317952._000865.pool.root.1
[2026-01-28 00:00:29] -rw-r--r--. 1 boincer umatlas       531 Jan 27 08:34 boinc_task_state.xml
[2026-01-28 00:00:29] -rw-------. 1 boincer umatlas      1040 Jan 27 08:35 memory_monitor_summary.json
[2026-01-28 00:00:29] -rw-------. 1 boincer umatlas   1516246 Jan 27 08:35 agis_ddmendpoints.agis.ALL.json
[2026-01-28 00:00:29] -rw-------. 1 boincer umatlas    625748 Jan 27 08:35 log.48317952._000865.job.log.tgz.1
[2026-01-28 00:00:29] -rw-------. 1 boincer umatlas      6384 Jan 27 08:35 heartbeat.json
[2026-01-28 00:00:29] -rw-------. 1 boincer umatlas        95 Jan 27 08:36 pilot_heartbeat.json
[2026-01-28 00:00:29] -rw-------. 1 boincer umatlas       822 Jan 27 08:36 pilotlog.txt
[2026-01-28 00:00:29] -rw-------. 1 boincer umatlas   2908087 Jan 27 08:36 log.48317952._000865.job.log.1
[2026-01-28 00:00:29] -rw-------. 1 boincer umatlas       357 Jan 27 08:36 output.list
[2026-01-28 00:00:29] -rw-r--r--. 1 boincer umatlas       620 Jan 27 08:36 runtime_log
[2026-01-28 00:00:29] -rw-------. 1 boincer umatlas   3553280 Jan 27 08:36 result.tar.gz
[2026-01-28 00:00:29] -rw-r--r--. 1 boincer umatlas      9332 Jan 27 08:36 runtime_log.err
[2026-01-28 00:00:29] -rw-------. 1 boincer umatlas       655 Jan 27 08:36 RERMDmTPY48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjd9KDm3COvSn.diag
[2026-01-28 00:00:29] -rw-r--r--. 1 boincer umatlas      6661 Jan 28 00:00 init_data.xml
[2026-01-28 00:00:29] -rw-r--r--. 1 boincer umatlas      8192 Jan 28 00:00 boinc_mmap_file
[2026-01-28 00:00:29] -rw-r--r--. 1 boincer umatlas        27 Jan 28 00:00 wrapper_checkpoint.txt
[2026-01-28 00:00:29] -rw-r--r--. 1 boincer umatlas     21284 Jan 28 00:00 stderr.txt
[2026-01-28 00:00:29] HITS file was successfully produced:
[2026-01-28 00:00:29] -rw-------. 1 boincer umatlas 184172977 Jan 27 08:34 shared/HITS.pool.root.1
[2026-01-28 00:00:29]  *** Contents of shared directory: ***
[2026-01-28 00:00:29] total 672636
[2026-01-28 00:00:29] -rw-r--r--. 2 boincer umatlas 500422950 Jan 27 00:03 ATLAS.root_0
[2026-01-28 00:00:29] -rw-r--r--. 2 boincer umatlas    597751 Jan 27 00:03 input.tar.gz
[2026-01-28 00:00:29] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 00:03 start_atlas.sh
[2026-01-28 00:00:29] -rw-------. 1 boincer umatlas 184172977 Jan 27 08:34 HITS.pool.root.1
[2026-01-28 00:00:29] -rw-------. 1 boincer umatlas   3553280 Jan 27 08:36 result.tar.gz
00:00:30 (624076): run_atlas exited; CPU time 54361.151959
00:00:30 (624076): called boinc_finish(0)

</stderr_txt>
]]>

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