Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:10 (1103485): wrapper (7.7.26015): starting
00:03:10 (1103485): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 00:03:11] Arguments: --nthreads 8
[2026-01-27 00:03:11] Threads: 8
[2026-01-27 00:03:11] Checking for CVMFS
[2026-01-27 00:03:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 00:03:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 00:03:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 00:03:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 00:03:15] 2.13.3.0 9330 118839 350240 155573 2 406 30464097 32935937 29854 16776704 0 550549090 99.701 417789288 32778 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-27 00:03:15] CVMFS is ok
[2026-01-27 00:03:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 00:03:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 00:03:15] Further information can be found at the LHC@home message board.
[2026-01-27 00:03:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 00:03:15] Checking for apptainer binary...
[2026-01-27 00:03:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 00:03:15] Running /usr/bin/apptainer --version
[2026-01-27 00:03:15] apptainer version 1.4.5-2.el9
[2026-01-27 00:03:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 00:03:16] c-5-5.aglt2.org
[2026-01-27 00:03:16] apptainer works
[2026-01-27 00:03:16] Set ATHENA_PROC_NUMBER=8
[2026-01-27 00:03:16] Set ATHENA_CORE_NUMBER=8
[2026-01-27 00:03:17] Starting ATLAS job with PandaID=6984226755
[2026-01-27 00:03:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 15:49:33]  *** The last 200 lines of the pilot log: ***
[2026-01-27 15:49:33] 2026-01-27 20:44:09,739 | INFO     | total number of processed events: 400 (read)
[2026-01-27 15:49:33] 2026-01-27 20:44:09,844 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6984226755/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 15:49:33] 2026-01-27 20:44:09,845 | INFO     | extracted standard info from prmon json
[2026-01-27 15:49:33] 2026-01-27 20:44:09,845 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 15:49:33] 2026-01-27 20:44:09,846 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 15:49:33] 2026-01-27 20:44:09,846 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 15:49:33] 2026-01-27 20:44:09,846 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 15:49:33] 2026-01-27 20:44:10,047 | INFO     | fitting pss+swap vs Time
[2026-01-27 15:49:33] 2026-01-27 20:44:10,084 | INFO     | sum of square deviations: 241453175665.87393
[2026-01-27 15:49:33] 2026-01-27 20:44:10,447 | INFO     | sum of deviations: 582135202954.2758
[2026-01-27 15:49:33] 2026-01-27 20:44:10,447 | INFO     | mean x: 1769518544.623913
[2026-01-27 15:49:33] 2026-01-27 20:44:10,447 | INFO     | mean y: 2474760.1510869567
[2026-01-27 15:49:33] 2026-01-27 20:44:10,447 | INFO     | intersect: -4263772864.321912
[2026-01-27 15:49:33] 2026-01-27 20:44:10,448 | INFO     | chi2: 6.649930695930711
[2026-01-27 15:49:33] 2026-01-27 20:44:10,450 | INFO     | sum of square deviations: 237538032297.5235
[2026-01-27 15:49:33] 2026-01-27 20:44:10,806 | INFO     | sum of deviations: 698141076405.0232
[2026-01-27 15:49:33] 2026-01-27 20:44:10,807 | INFO     | mean x: 1769518392.1300547
[2026-01-27 15:49:33] 2026-01-27 20:44:10,807 | INFO     | mean y: 2479263.319125683
[2026-01-27 15:49:33] 2026-01-27 20:44:10,807 | INFO     | intersect: -5198260437.398863
[2026-01-27 15:49:33] 2026-01-27 20:44:10,892 | INFO     | chi2: 5.15696363589167
[2026-01-27 15:49:33] 2026-01-27 20:44:10,892 | INFO     | current chi2=5.15696363589167 (change=22.450866457189264 %)
[2026-01-27 15:49:33] 2026-01-27 20:44:10,892 | INFO     | right removable region: 914
[2026-01-27 15:49:33] 2026-01-27 20:44:10,893 | INFO     | sum of square deviations: 237537176336.46545
[2026-01-27 15:49:33] 2026-01-27 20:44:11,266 | INFO     | sum of deviations: 284195547550.24207
[2026-01-27 15:49:33] 2026-01-27 20:44:11,267 | INFO     | mean x: 1769518697.134426
[2026-01-27 15:49:33] 2026-01-27 20:44:11,267 | INFO     | mean y: 2486359.2907103826
[2026-01-27 15:49:33] 2026-01-27 20:44:11,267 | INFO     | intersect: -2114611026.426206
[2026-01-27 15:49:33] 2026-01-27 20:44:11,268 | INFO     | chi2: 2.8504319326490766
[2026-01-27 15:49:33] 2026-01-27 20:44:11,269 | INFO     | current chi2=2.8504319326490766 (change=57.135915199938246 %)
[2026-01-27 15:49:33] 2026-01-27 20:44:11,270 | INFO     | sum of square deviations: 233663903397.21335
[2026-01-27 15:49:33] 2026-01-27 20:44:11,558 | INFO     | sum of deviations: 134151306455.36212
[2026-01-27 15:49:33] 2026-01-27 20:44:11,558 | INFO     | mean x: 1769518849.6417582
[2026-01-27 15:49:33] 2026-01-27 20:44:11,558 | INFO     | mean y: 2492261.6483516484
[2026-01-27 15:49:33] 2026-01-27 20:44:11,558 | INFO     | intersect: -1013425310.6661677
[2026-01-27 15:49:33] 2026-01-27 20:44:11,560 | INFO     | chi2: 1.8324029711181375
[2026-01-27 15:49:33] 2026-01-27 20:44:11,560 | INFO     | current chi2=1.8324029711181375 (change=35.7149016564947 %)
[2026-01-27 15:49:33] 2026-01-27 20:44:11,565 | INFO     | sum of square deviations: 229832956586.86194
[2026-01-27 15:49:33] 2026-01-27 20:44:11,607 | INFO     | sum of deviations: 60358433452.55235
[2026-01-27 15:49:33] 2026-01-27 20:44:11,607 | INFO     | mean x: 1769519002.1491714
[2026-01-27 15:49:33] 2026-01-27 20:44:11,607 | INFO     | mean y: 2495197.203314917
[2026-01-27 15:49:33] 2026-01-27 20:44:11,608 | INFO     | intersect: -462213591.82486826
[2026-01-27 15:49:33] 2026-01-27 20:44:11,613 | INFO     | chi2: 1.6042310483140358
[2026-01-27 15:49:33] 2026-01-27 20:44:11,613 | INFO     | current chi2=1.6042310483140358 (change=12.452060294623433 %)
[2026-01-27 15:49:33] 2026-01-27 20:44:11,613 | INFO     | left removable region: 30
[2026-01-27 15:49:33] 2026-01-27 20:44:11,614 | INFO     | sum of square deviations: 214201419950.5555
[2026-01-27 15:49:33] 2026-01-27 20:44:11,658 | INFO     | sum of deviations: 120790740403.17418
[2026-01-27 15:49:33] 2026-01-27 20:44:11,662 | INFO     | mean x: 1769519276.6662896
[2026-01-27 15:49:33] 2026-01-27 20:44:11,662 | INFO     | mean y: 2502133.5226244344
[2026-01-27 15:49:33] 2026-01-27 20:44:11,663 | INFO     | intersect: -995350932.2299213
[2026-01-27 15:49:33] 2026-01-27 20:44:11,664 | INFO     | chi2: 0.004617919454747138
[2026-01-27 15:49:33] 2026-01-27 20:44:11,664 | INFO     | current memory leak: 0.56 B/s (using 884 data points, chi2=0.00)
[2026-01-27 15:49:33] 2026-01-27 20:44:11,665 | INFO     | could have reported an average CPU frequency of 2600 MHz (35 samples)
[2026-01-27 15:49:33] 2026-01-27 20:44:11,665 | INFO     | ..............................
[2026-01-27 15:49:33] 2026-01-27 20:44:11,665 | INFO     | . Timing measurements:
[2026-01-27 15:49:33] 2026-01-27 20:44:11,665 | INFO     | . get job = 1 s
[2026-01-27 15:49:33] 2026-01-27 20:44:11,665 | INFO     | . initial setup = 67 s
[2026-01-27 15:49:33] 2026-01-27 20:44:11,665 | INFO     | . payload setup = 68 s
[2026-01-27 15:49:33] 2026-01-27 20:44:11,666 | INFO     | . stage-in = 1 s
[2026-01-27 15:49:33] 2026-01-27 20:44:11,666 | INFO     | . payload execution = 56176 s
[2026-01-27 15:49:33] 2026-01-27 20:44:11,666 | INFO     | . stage-out = 7 s
[2026-01-27 15:49:33] 2026-01-27 20:44:11,666 | INFO     | . log creation = 2 s
[2026-01-27 15:49:33] 2026-01-27 20:44:11,670 | INFO     | ..............................
[2026-01-27 15:49:33] 2026-01-27 20:44:11,762 | INFO     | time since job start (56272s) is within the limit (349056.0s)
[2026-01-27 15:49:33] 2026-01-27 20:44:13,186 | INFO     | 
[2026-01-27 15:49:33] 2026-01-27 20:44:13,186 | INFO     | job summary report
[2026-01-27 15:49:33] 2026-01-27 20:44:13,186 | INFO     | --------------------------------------------------
[2026-01-27 15:49:33] 2026-01-27 20:44:13,187 | INFO     | PanDA job id: 6984226755
[2026-01-27 15:49:33] 2026-01-27 20:44:13,187 | INFO     | task id: 48317931
[2026-01-27 15:49:33] 2026-01-27 20:44:13,187 | INFO     | errors: (none)
[2026-01-27 15:49:33] 2026-01-27 20:44:13,187 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 15:49:33] 2026-01-27 20:44:13,187 | INFO     | pilot state: finished 
[2026-01-27 15:49:33] 2026-01-27 20:44:13,187 | INFO     | transexitcode: 0
[2026-01-27 15:49:33] 2026-01-27 20:44:13,187 | INFO     | exeerrorcode: 0
[2026-01-27 15:49:33] 2026-01-27 20:44:13,187 | INFO     | exeerrordiag: 
[2026-01-27 15:49:33] 2026-01-27 20:44:13,187 | INFO     | exitcode: 0
[2026-01-27 15:49:33] 2026-01-27 20:44:13,187 | INFO     | exitmsg: OK
[2026-01-27 15:49:33] 2026-01-27 20:44:13,187 | INFO     | cpuconsumptiontime: 51942 s
[2026-01-27 15:49:33] 2026-01-27 20:44:13,188 | INFO     | nevents: 400
[2026-01-27 15:49:33] 2026-01-27 20:44:13,188 | INFO     | neventsw: 0
[2026-01-27 15:49:33] 2026-01-27 20:44:13,188 | INFO     | pid: 1132693
[2026-01-27 15:49:33] 2026-01-27 20:44:13,188 | INFO     | pgrp: 1132693
[2026-01-27 15:49:33] 2026-01-27 20:44:13,188 | INFO     | corecount: 8
[2026-01-27 15:49:33] 2026-01-27 20:44:13,188 | INFO     | event service: False
[2026-01-27 15:49:33] 2026-01-27 20:44:13,188 | INFO     | sizes: {0: 2283086, 1: 2283771, 3: 2283799, 5: 2242389, 6: 2284288, 7: 2284316, 56250: 2332146, 56251: 2332145, 56259: 2341199, 56261: 2341255, 56266: 2341449}
[2026-01-27 15:49:33] 2026-01-27 20:44:13,188 | INFO     | --------------------------------------------------
[2026-01-27 15:49:33] 2026-01-27 20:44:13,285 | INFO     | 
[2026-01-27 15:49:33] 2026-01-27 20:44:13,285 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-27 15:49:33] 2026-01-27 20:44:13,509 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 15:49:33] 2026-01-27 20:44:13,510 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 15:49:33] 2026-01-27 20:44:13,510 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 15:49:33] 2026-01-27 20:44:13,510 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 15:49:33] 2026-01-27 20:44:13,510 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 15:49:33] 2026-01-27 20:44:13,510 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 15:49:33] 2026-01-27 20:44:13,510 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 15:49:33] 2026-01-27 20:44:13,510 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 15:49:33] 2026-01-27 20:44:13,510 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 15:49:33] 2026-01-27 20:44:13,511 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 15:49:33] 2026-01-27 20:44:13,511 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 15:49:33] 2026-01-27 20:44:13,511 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 15:49:33] 2026-01-27 20:44:13,511 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 15:49:33] 2026-01-27 20:44:13,511 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 15:49:33] 2026-01-27 20:44:13,511 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 15:49:33] 2026-01-27 20:44:13,511 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 15:49:33] 2026-01-27 20:44:13,511 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 15:49:33] 2026-01-27 20:44:13,511 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 15:49:33] 2026-01-27 20:44:13,512 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 15:49:33] 2026-01-27 20:44:13,512 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 15:49:33] 2026-01-27 20:44:13,512 | INFO     | job 6984226755 has completed (purged errors)
[2026-01-27 15:49:33] 2026-01-27 20:44:13,512 | INFO     | overall cleanup function is called
[2026-01-27 15:49:33] 2026-01-27 20:44:14,633 | INFO     | --- collectZombieJob: --- 10, [1132693]
[2026-01-27 15:49:33] 2026-01-27 20:44:14,633 | INFO     | zombie collector waiting for pid 1132693
[2026-01-27 15:49:33] 2026-01-27 20:44:14,633 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 15:49:33] 2026-01-27 20:44:14,634 | INFO     | collected zombie processes
[2026-01-27 15:49:33] 2026-01-27 20:44:14,634 | INFO     | will attempt to kill all subprocesses of pid=1132693
[2026-01-27 15:49:33] 2026-01-27 20:44:20,975 | INFO     | PID=1115730 has CPU usage=13.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-27 15:49:33] 2026-01-27 20:44:20,975 | INFO     | .. there are 42 such processes running
[2026-01-27 15:49:33] 2026-01-27 20:44:21,019 | INFO     | process IDs to be killed: [1132693] (in reverse order)
[2026-01-27 15:49:33] 2026-01-27 20:44:21,180 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 15:49:33] 2026-01-27 20:44:21,180 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 15:49:33] 2026-01-27 20:44:21,213 | INFO     | did not find any defunct processes belonging to 1132693
[2026-01-27 15:49:33] 2026-01-27 20:44:21,299 | INFO     | did not find any defunct processes belonging to 1132693
[2026-01-27 15:49:33] 2026-01-27 20:44:21,299 | INFO     | ready for new job
[2026-01-27 15:49:33] 2026-01-27 20:44:21,299 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 15:49:33] 2026-01-27 20:44:21,305 | INFO     | **************************************
[2026-01-27 15:49:33] 2026-01-27 20:44:21,306 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 15:49:33] 2026-01-27 20:44:21,306 | INFO     | **************************************
[2026-01-27 15:49:33] 2026-01-27 20:44:21,306 | INFO     | 
[2026-01-27 15:49:33] 2026-01-27 20:44:21,312 | INFO     | architecture information:
[2026-01-27 15:49:33] 2026-01-27 20:44:21,313 | INFO     | executing command: cat /etc/os-release
[2026-01-27 15:49:33] 2026-01-27 20:44:21,393 | INFO     | cat /etc/os-release:
[2026-01-27 15:49:33] NAME="CentOS Linux"
[2026-01-27 15:49:33] VERSION="7 (Core)"
[2026-01-27 15:49:33] ID="centos"
[2026-01-27 15:49:33] ID_LIKE="rhel fedora"
[2026-01-27 15:49:33] VERSION_ID="7"
[2026-01-27 15:49:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 15:49:33] ANSI_COLOR="0;31"
[2026-01-27 15:49:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 15:49:33] HOME_URL="https://www.centos.org/"
[2026-01-27 15:49:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 15:49:33] 
[2026-01-27 15:49:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 15:49:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 15:49:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 15:49:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 15:49:33] 
[2026-01-27 15:49:33] 2026-01-27 20:44:21,394 | INFO     | **************************************
[2026-01-27 15:49:33] 2026-01-27 20:44:21,897 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-27 15:49:33] 2026-01-27 20:44:21,989 | INFO     | sufficient remaining disk space (74794926080 B)
[2026-01-27 15:49:33] 2026-01-27 20:44:21,989 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 15:49:33] 2026-01-27 20:44:21,989 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 15:49:33] 2026-01-27 20:44:21,990 | INFO     | update_server=False
[2026-01-27 15:49:33] 2026-01-27 20:44:21,990 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 15:49:33] 2026-01-27 20:44:21,990 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 15:49:33] 2026-01-27 20:44:22,036 | INFO     | all payload control threads have been joined
[2026-01-27 15:49:33] 2026-01-27 20:44:22,056 | INFO     | all job control threads have been joined
[2026-01-27 15:49:33] 2026-01-27 20:44:22,890 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 15:49:33] 2026-01-27 20:44:22,946 | INFO     | all data control threads have been joined
[2026-01-27 15:49:33] 2026-01-27 20:44:22,972 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 15:49:33] 2026-01-27 20:44:22,972 | INFO     | aborting loop
[2026-01-27 15:49:33] 2026-01-27 20:44:23,049 | INFO     | [payload] control thread has finished
[2026-01-27 15:49:33] 2026-01-27 20:44:23,055 | INFO     | [job] retrieve thread has finished
[2026-01-27 15:49:33] 2026-01-27 20:44:23,057 | INFO     | [job] queue monitor thread has finished
[2026-01-27 15:49:33] 2026-01-27 20:44:23,062 | INFO     | [job] control thread has finished
[2026-01-27 15:49:33] 2026-01-27 20:44:23,133 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 15:49:33] 2026-01-27 20:44:23,588 | INFO     | [data] copytool_in thread has finished
[2026-01-27 15:49:33] 2026-01-27 20:44:23,589 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 15:49:33] 2026-01-27 20:44:23,702 | INFO     | [job] validate thread has finished
[2026-01-27 15:49:33] 2026-01-27 20:44:23,850 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 15:49:33] 2026-01-27 20:44:23,956 | INFO     | [data] control thread has finished
[2026-01-27 15:49:33] 2026-01-27 20:44:23,967 | INFO     | [payload] failed_post thread has finished
[2026-01-27 15:49:33] 2026-01-27 20:44:23,992 | INFO     | [job] job monitor thread has finished
[2026-01-27 15:49:33] 2026-01-27 20:44:23,998 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 15:49:33] 2026-01-27 20:44:24,042 | INFO     | [payload] validate_post thread has finished
[2026-01-27 15:49:33] 2026-01-27 20:44:24,152 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 15:49:33] 2026-01-27 20:44:24,897 | INFO     | [data] copytool_out thread has finished
[2026-01-27 15:49:33] 2026-01-27 20:44:28,006 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 15:49:33] 2026-01-27 20:44:54,579 | INFO     | PID=1115730 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 15:49:33] 2026-01-27 20:44:54,581 | INFO     | .. there are 42 such processes running
[2026-01-27 15:49:33] 2026-01-27 20:44:54,581 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 15:49:33] 2026-01-27 20:44:54,581 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 15:49:33] 2026-01-27 20:44:54,581 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 15:49:33] 2026-01-27 20:45:21,433 | INFO     | [monitor] cgroup control has ended
[2026-01-27 15:49:33] 2026-01-27 20:45:22,708 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140695825872704)>', '<ExcThread(monitor, started 140695176197888)>']
[2026-01-27 15:49:33] 2026-01-27 20:45:22,821 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 15:49:33] 2026-01-27 20:45:22,822 | INFO     | [monitor] control thread has ended
[2026-01-27 15:49:33] 2026-01-27 20:45:27,734 | INFO     | all workflow threads have been joined
[2026-01-27 15:49:33] 2026-01-27 20:45:27,734 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 15:49:33] 2026-01-27 20:45:27,735 | INFO     | traces error code: 0
[2026-01-27 15:49:33] 2026-01-27 20:45:27,735 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 15:49:33] 2026-01-27 20:45:28,223 [wrapper] ==== pilot stdout END ====
[2026-01-27 15:49:33] 2026-01-27 20:45:28,280 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 15:49:33] 2026-01-27 20:45:28,334 [wrapper] pilotpid: 1115730
[2026-01-27 15:49:33] 2026-01-27 20:45:28,392 [wrapper] Pilot exit status: 0
[2026-01-27 15:49:33] 2026-01-27 20:45:28,524 [wrapper] pandaids: 6984226755
[2026-01-27 15:49:33] 2026-01-27 20:45:28,618 [wrapper] cleanup supervisor_pilot 1408522 1115731
[2026-01-27 15:49:33] 2026-01-27 20:45:28,696 [wrapper] Test setup, not cleaning
[2026-01-27 15:49:33] 2026-01-27 20:45:28,747 [wrapper] apfmon messages muted
[2026-01-27 15:49:33] 2026-01-27 20:45:28,792 [wrapper] ==== wrapper stdout END ====
[2026-01-27 15:49:33] 2026-01-27 20:45:28,853 [wrapper] ==== wrapper stderr END ====
[2026-01-27 15:49:33]  *** Error codes and diagnostics ***
[2026-01-27 15:49:33]     "exeErrorCode": 0,
[2026-01-27 15:49:33]     "exeErrorDiag": "",
[2026-01-27 15:49:33]     "pilotErrorCode": 0,
[2026-01-27 15:49:33]     "pilotErrorDiag": "",
[2026-01-27 15:49:33]  *** Listing of results directory ***
[2026-01-27 15:49:33] total 674252
[2026-01-27 15:49:33] -rw-r--r--. 1 boincer umatlas    584422 Jan 26 04:48 pilot3.tar.gz
[2026-01-27 15:49:33] -rwx------. 1 boincer umatlas     36322 Jan 26 04:49 runpilot2-wrapper.sh
[2026-01-27 15:49:33] -rw-r--r--. 1 boincer umatlas      5111 Jan 26 04:50 queuedata.json
[2026-01-27 15:49:33] -rw-r--r--. 1 boincer umatlas       100 Jan 27 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 15:49:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 27 00:03 run_atlas
[2026-01-27 15:49:33] -rw-r--r--. 1 boincer umatlas       105 Jan 27 00:03 job.xml
[2026-01-27 15:49:33] -rw-r--r--. 2 boincer umatlas 492682922 Jan 27 00:03 EVNT.48317929._000067.pool.root.1
[2026-01-27 15:49:33] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 00:03 start_atlas.sh
[2026-01-27 15:49:33] drwxrwx--x. 2 boincer umatlas      4096 Jan 27 00:03 shared
[2026-01-27 15:49:33] -rw-r--r--. 2 boincer umatlas    597755 Jan 27 00:03 input.tar.gz
[2026-01-27 15:49:33] -rw-r--r--. 1 boincer umatlas         0 Jan 27 00:03 boinc_lockfile
[2026-01-27 15:49:33] -rw-r--r--. 1 boincer umatlas      2508 Jan 27 00:03 pandaJob.out
[2026-01-27 15:49:33] -rw-------. 1 boincer umatlas        57 Jan 27 00:03 setup.sh.local
[2026-01-27 15:49:33] -rw-------. 1 boincer umatlas       431 Jan 27 00:06 workernode_map.json
[2026-01-27 15:49:33] -rw-------. 1 boincer umatlas   1006441 Jan 27 00:06 agis_schedconf.cvmfs.json
[2026-01-27 15:49:33] drwx------. 5 boincer umatlas      4096 Jan 27 00:06 pilot3
[2026-01-27 15:49:33] -rw-------. 1 boincer umatlas 180838330 Jan 27 15:41 HITS.48317931._002130.pool.root.1
[2026-01-27 15:49:33] -rw-r--r--. 1 boincer umatlas       531 Jan 27 15:41 boinc_task_state.xml
[2026-01-27 15:49:33] -rw-------. 1 boincer umatlas      1042 Jan 27 15:43 memory_monitor_summary.json
[2026-01-27 15:49:33] -rw-------. 1 boincer umatlas   1516246 Jan 27 15:44 agis_ddmendpoints.agis.ALL.json
[2026-01-27 15:49:33] -rw-------. 1 boincer umatlas        95 Jan 27 15:44 pilot_heartbeat.json
[2026-01-27 15:49:33] -rw-------. 1 boincer umatlas    909114 Jan 27 15:44 log.48317931._002130.job.log.tgz.1
[2026-01-27 15:49:33] -rw-------. 1 boincer umatlas      6375 Jan 27 15:44 heartbeat.json
[2026-01-27 15:49:33] -rw-------. 1 boincer umatlas      4820 Jan 27 15:45 pilotlog.txt
[2026-01-27 15:49:33] -rw-------. 1 boincer umatlas   5577947 Jan 27 15:45 log.48317931._002130.job.log.1
[2026-01-27 15:49:33] -rw-------. 1 boincer umatlas       357 Jan 27 15:45 output.list
[2026-01-27 15:49:33] -rw-r--r--. 1 boincer umatlas       620 Jan 27 15:45 runtime_log
[2026-01-27 15:49:33] -rw-------. 1 boincer umatlas   6502400 Jan 27 15:45 result.tar.gz
[2026-01-27 15:49:33] -rw-r--r--. 1 boincer umatlas      9327 Jan 27 15:45 runtime_log.err
[2026-01-27 15:49:33] -rw-------. 1 boincer umatlas       655 Jan 27 15:45 3clKDmJPY48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9c9KDmRTr91m.diag
[2026-01-27 15:49:33] -rw-r--r--. 1 boincer umatlas      6658 Jan 27 15:46 init_data.xml
[2026-01-27 15:49:33] -rw-r--r--. 1 boincer umatlas      8192 Jan 27 15:49 boinc_mmap_file
[2026-01-27 15:49:33] -rw-r--r--. 1 boincer umatlas        27 Jan 27 15:49 wrapper_checkpoint.txt
[2026-01-27 15:49:33] -rw-r--r--. 1 boincer umatlas     21291 Jan 27 15:49 stderr.txt
[2026-01-27 15:49:34] HITS file was successfully produced:
[2026-01-27 15:49:34] -rw-------. 1 boincer umatlas 180838330 Jan 27 15:41 shared/HITS.pool.root.1
[2026-01-27 15:49:34]  *** Contents of shared directory: ***
[2026-01-27 15:49:34] total 664696
[2026-01-27 15:49:34] -rw-r--r--. 2 boincer umatlas 492682922 Jan 27 00:03 ATLAS.root_0
[2026-01-27 15:49:34] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 00:03 start_atlas.sh
[2026-01-27 15:49:34] -rw-r--r--. 2 boincer umatlas    597755 Jan 27 00:03 input.tar.gz
[2026-01-27 15:49:34] -rw-------. 1 boincer umatlas 180838330 Jan 27 15:41 HITS.pool.root.1
[2026-01-27 15:49:34] -rw-------. 1 boincer umatlas   6502400 Jan 27 15:45 result.tar.gz
15:49:35 (1103485): run_atlas exited; CPU time 54122.324202
15:49:35 (1103485): called boinc_finish(0)

</stderr_txt>
]]>

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