Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:03 (1677553): wrapper (7.7.26015): starting
00:02:03 (1677553): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 00:02:03] Arguments: --nthreads 8
[2026-01-27 00:02:03] Threads: 8
[2026-01-27 00:02:03] Checking for CVMFS
[2026-01-27 00:02:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 00:02:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 00:02:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 00:02:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 00:02:05] 2.13.3.0 10480 46983 243828 155573 2 29 36853794 40960000 13125 16776704 0 36415336 99.548 51129402 32858 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-27 00:02:05] CVMFS is ok
[2026-01-27 00:02:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 00:02:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 00:02:05] Further information can be found at the LHC@home message board.
[2026-01-27 00:02:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 00:02:05] Checking for apptainer binary...
[2026-01-27 00:02:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 00:02:05] Running /usr/bin/apptainer --version
[2026-01-27 00:02:06] apptainer version 1.4.5-2.el9
[2026-01-27 00:02:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 00:02:06] c-211-12.aglt2.org
[2026-01-27 00:02:06] apptainer works
[2026-01-27 00:02:06] Set ATHENA_PROC_NUMBER=8
[2026-01-27 00:02:06] Set ATHENA_CORE_NUMBER=8
[2026-01-27 00:02:06] Starting ATLAS job with PandaID=6984225530
[2026-01-27 00:02:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 13:20:35]  *** The last 200 lines of the pilot log: ***
[2026-01-27 13:20:35] 2026-01-27 18:19:59,729 | INFO     | preparing for final server update for job 6984225530 in state='finished'
[2026-01-27 13:20:35] 2026-01-27 18:19:59,730 | INFO     | reading metadata from: /tmp/boinchome/slots/5/PanDA_Pilot-6984225530/jobReport.json
[2026-01-27 13:20:35] 2026-01-27 18:19:59,733 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/5/workernode_map.json
[2026-01-27 13:20:35] 2026-01-27 18:19:59,733 | INFO     | this job has now completed (state=finished)
[2026-01-27 13:20:35] 2026-01-27 18:19:59,733 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 13:20:35] 2026-01-27 18:19:59,733 | INFO     | log transfer has been attempted: DONE
[2026-01-27 13:20:35] 2026-01-27 18:19:59,734 | INFO     | job 6984225530 has finished - writing final server update
[2026-01-27 13:20:35] 2026-01-27 18:19:59,734 | INFO     | total number of processed events: 400 (read)
[2026-01-27 13:20:35] 2026-01-27 18:19:59,749 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6984225530/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 13:20:35] 2026-01-27 18:19:59,750 | INFO     | extracted standard info from prmon json
[2026-01-27 13:20:35] 2026-01-27 18:19:59,750 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 13:20:35] 2026-01-27 18:19:59,750 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 13:20:35] 2026-01-27 18:19:59,750 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 13:20:35] 2026-01-27 18:19:59,750 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 13:20:35] 2026-01-27 18:19:59,766 | INFO     | fitting pss+swap vs Time
[2026-01-27 13:20:35] 2026-01-27 18:19:59,768 | INFO     | sum of square deviations: 148858259504.63086
[2026-01-27 13:20:35] 2026-01-27 18:19:59,799 | INFO     | sum of deviations: 342137719526.25183
[2026-01-27 13:20:35] 2026-01-27 18:19:59,799 | INFO     | mean x: 1769514138.6079183
[2026-01-27 13:20:35] 2026-01-27 18:19:59,800 | INFO     | mean y: 2504300.056194125
[2026-01-27 13:20:35] 2026-01-27 18:19:59,800 | INFO     | intersect: -4064569532.9140143
[2026-01-27 13:20:35] 2026-01-27 18:19:59,801 | INFO     | chi2: 3.224847351754878
[2026-01-27 13:20:35] 2026-01-27 18:19:59,803 | INFO     | sum of square deviations: 146024899386.4935
[2026-01-27 13:20:35] 2026-01-27 18:19:59,833 | INFO     | sum of deviations: 388553155349.4631
[2026-01-27 13:20:35] 2026-01-27 18:19:59,834 | INFO     | mean x: 1769513986.11054
[2026-01-27 13:20:35] 2026-01-27 18:19:59,834 | INFO     | mean y: 2506784.5411311053
[2026-01-27 13:20:35] 2026-01-27 18:19:59,834 | INFO     | intersect: -4705938457.51634
[2026-01-27 13:20:35] 2026-01-27 18:19:59,835 | INFO     | chi2: 2.5433608386318873
[2026-01-27 13:20:35] 2026-01-27 18:19:59,835 | INFO     | current chi2=2.5433608386318873 (change=21.132365001777327 %)
[2026-01-27 13:20:35] 2026-01-27 18:19:59,835 | INFO     | right removable region: 777
[2026-01-27 13:20:35] 2026-01-27 18:19:59,837 | INFO     | sum of square deviations: 146024704064.49347
[2026-01-27 13:20:35] 2026-01-27 18:19:59,865 | INFO     | sum of deviations: 156048081903.1132
[2026-01-27 13:20:35] 2026-01-27 18:19:59,865 | INFO     | mean x: 1769514291.11054
[2026-01-27 13:20:35] 2026-01-27 18:19:59,865 | INFO     | mean y: 2514300.2544987146
[2026-01-27 13:20:35] 2026-01-27 18:19:59,866 | INFO     | intersect: -1888462386.1696775
[2026-01-27 13:20:35] 2026-01-27 18:19:59,867 | INFO     | chi2: 0.9389040333432583
[2026-01-27 13:20:35] 2026-01-27 18:19:59,867 | INFO     | current chi2=0.9389040333432583 (change=70.8853185614404 %)
[2026-01-27 13:20:35] 2026-01-27 18:19:59,869 | INFO     | sum of square deviations: 143227572880.44492
[2026-01-27 13:20:35] 2026-01-27 18:19:59,896 | INFO     | sum of deviations: 107094688345.91463
[2026-01-27 13:20:35] 2026-01-27 18:19:59,896 | INFO     | mean x: 1769514443.6067271
[2026-01-27 13:20:35] 2026-01-27 18:19:59,896 | INFO     | mean y: 2516966.401034929
[2026-01-27 13:20:35] 2026-01-27 18:19:59,897 | INFO     | intersect: -1320591385.2278886
[2026-01-27 13:20:35] 2026-01-27 18:19:59,898 | INFO     | chi2: 0.8051710719404023
[2026-01-27 13:20:35] 2026-01-27 18:19:59,898 | INFO     | current chi2=0.8051710719404023 (change=14.243517617733357 %)
[2026-01-27 13:20:35] 2026-01-27 18:19:59,898 | INFO     | left removable region: 20
[2026-01-27 13:20:35] 2026-01-27 18:19:59,900 | INFO     | sum of square deviations: 134516704677.59317
[2026-01-27 13:20:35] 2026-01-27 18:19:59,923 | INFO     | sum of deviations: 97548221110.67494
[2026-01-27 13:20:35] 2026-01-27 18:19:59,923 | INFO     | mean x: 1769514565.6129458
[2026-01-27 13:20:35] 2026-01-27 18:19:59,923 | INFO     | mean y: 2522717.073976222
[2026-01-27 13:20:35] 2026-01-27 18:19:59,923 | INFO     | intersect: -1280685926.1847682
[2026-01-27 13:20:35] 2026-01-27 18:19:59,924 | INFO     | chi2: 0.010295605138639663
[2026-01-27 13:20:35] 2026-01-27 18:19:59,925 | INFO     | current memory leak: 0.73 B/s (using 757 data points, chi2=0.01)
[2026-01-27 13:20:35] 2026-01-27 18:19:59,925 | INFO     | could have reported an average CPU frequency of 2688 MHz (30 samples)
[2026-01-27 13:20:35] 2026-01-27 18:19:59,926 | INFO     | ..............................
[2026-01-27 13:20:35] 2026-01-27 18:19:59,926 | INFO     | . Timing measurements:
[2026-01-27 13:20:35] 2026-01-27 18:19:59,926 | INFO     | . get job = 0 s
[2026-01-27 13:20:35] 2026-01-27 18:19:59,926 | INFO     | . initial setup = 32 s
[2026-01-27 13:20:35] 2026-01-27 18:19:59,926 | INFO     | . payload setup = 34 s
[2026-01-27 13:20:35] 2026-01-27 18:19:59,926 | INFO     | . stage-in = 0 s
[2026-01-27 13:20:35] 2026-01-27 18:19:59,926 | INFO     | . payload execution = 47729 s
[2026-01-27 13:20:35] 2026-01-27 18:19:59,926 | INFO     | . stage-out = 3 s
[2026-01-27 13:20:35] 2026-01-27 18:19:59,927 | INFO     | . log creation = 0 s
[2026-01-27 13:20:35] 2026-01-27 18:19:59,927 | INFO     | ..............................
[2026-01-27 13:20:35] 2026-01-27 18:20:00,100 | INFO     | 
[2026-01-27 13:20:35] 2026-01-27 18:20:00,100 | INFO     | job summary report
[2026-01-27 13:20:35] 2026-01-27 18:20:00,100 | INFO     | --------------------------------------------------
[2026-01-27 13:20:35] 2026-01-27 18:20:00,101 | INFO     | PanDA job id: 6984225530
[2026-01-27 13:20:35] 2026-01-27 18:20:00,101 | INFO     | task id: 48317931
[2026-01-27 13:20:35] 2026-01-27 18:20:00,101 | INFO     | errors: (none)
[2026-01-27 13:20:35] 2026-01-27 18:20:00,101 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 13:20:35] 2026-01-27 18:20:00,101 | INFO     | pilot state: finished 
[2026-01-27 13:20:35] 2026-01-27 18:20:00,101 | INFO     | transexitcode: 0
[2026-01-27 13:20:35] 2026-01-27 18:20:00,101 | INFO     | exeerrorcode: 0
[2026-01-27 13:20:35] 2026-01-27 18:20:00,101 | INFO     | exeerrordiag: 
[2026-01-27 13:20:35] 2026-01-27 18:20:00,101 | INFO     | exitcode: 0
[2026-01-27 13:20:35] 2026-01-27 18:20:00,101 | INFO     | exitmsg: OK
[2026-01-27 13:20:35] 2026-01-27 18:20:00,102 | INFO     | cpuconsumptiontime: 57575 s
[2026-01-27 13:20:35] 2026-01-27 18:20:00,102 | INFO     | nevents: 400
[2026-01-27 13:20:35] 2026-01-27 18:20:00,102 | INFO     | neventsw: 0
[2026-01-27 13:20:35] 2026-01-27 18:20:00,102 | INFO     | pid: 1717280
[2026-01-27 13:20:35] 2026-01-27 18:20:00,102 | INFO     | pgrp: 1717280
[2026-01-27 13:20:35] 2026-01-27 18:20:00,102 | INFO     | corecount: 8
[2026-01-27 13:20:35] 2026-01-27 18:20:00,102 | INFO     | event service: False
[2026-01-27 13:20:35] 2026-01-27 18:20:00,102 | INFO     | sizes: {0: 2283683, 1: 2283767, 2: 2283767, 3: 2284200, 13: 2284228, 47767: 2329483, 47768: 2329610, 47773: 2338858}
[2026-01-27 13:20:35] 2026-01-27 18:20:00,102 | INFO     | --------------------------------------------------
[2026-01-27 13:20:35] 2026-01-27 18:20:00,103 | INFO     | 
[2026-01-27 13:20:35] 2026-01-27 18:20:00,103 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-27 13:20:35] 2026-01-27 18:20:00,307 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 13:20:35] 2026-01-27 18:20:00,307 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 13:20:35] 2026-01-27 18:20:00,307 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 13:20:35] 2026-01-27 18:20:00,307 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 13:20:35] 2026-01-27 18:20:00,307 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 13:20:35] 2026-01-27 18:20:00,308 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 13:20:35] 2026-01-27 18:20:00,308 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 13:20:35] 2026-01-27 18:20:00,308 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 13:20:35] 2026-01-27 18:20:00,308 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 13:20:35] 2026-01-27 18:20:00,308 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 13:20:35] 2026-01-27 18:20:00,308 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 13:20:35] 2026-01-27 18:20:00,308 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 13:20:35] 2026-01-27 18:20:00,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 13:20:35] 2026-01-27 18:20:00,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 13:20:35] 2026-01-27 18:20:00,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 13:20:35] 2026-01-27 18:20:00,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 13:20:35] 2026-01-27 18:20:00,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 13:20:35] 2026-01-27 18:20:00,309 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 13:20:35] 2026-01-27 18:20:00,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 13:20:35] 2026-01-27 18:20:00,310 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 13:20:35] 2026-01-27 18:20:00,310 | INFO     | job 6984225530 has completed (purged errors)
[2026-01-27 13:20:35] 2026-01-27 18:20:00,310 | INFO     | overall cleanup function is called
[2026-01-27 13:20:35] 2026-01-27 18:20:00,442 | INFO     | PID=1690991 has CPU usage=14.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-27 13:20:35] 2026-01-27 18:20:00,442 | INFO     | .. there are 14 such processes running
[2026-01-27 13:20:35] 2026-01-27 18:20:01,328 | INFO     | --- collectZombieJob: --- 10, [1717280]
[2026-01-27 13:20:35] 2026-01-27 18:20:01,329 | INFO     | zombie collector waiting for pid 1717280
[2026-01-27 13:20:35] 2026-01-27 18:20:01,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 13:20:35] 2026-01-27 18:20:01,350 | INFO     | collected zombie processes
[2026-01-27 13:20:35] 2026-01-27 18:20:01,350 | INFO     | will attempt to kill all subprocesses of pid=1717280
[2026-01-27 13:20:35] 2026-01-27 18:20:01,901 | INFO     | process IDs to be killed: [1717280] (in reverse order)
[2026-01-27 13:20:35] 2026-01-27 18:20:02,031 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 13:20:35] 2026-01-27 18:20:02,031 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 13:20:35] 2026-01-27 18:20:02,099 | INFO     | did not find any defunct processes belonging to 1717280
[2026-01-27 13:20:35] 2026-01-27 18:20:02,123 | INFO     | did not find any defunct processes belonging to 1717280
[2026-01-27 13:20:35] 2026-01-27 18:20:02,124 | INFO     | ready for new job
[2026-01-27 13:20:35] 2026-01-27 18:20:02,124 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 13:20:35] 2026-01-27 18:20:02,131 | INFO     | **************************************
[2026-01-27 13:20:35] 2026-01-27 18:20:02,132 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 13:20:35] 2026-01-27 18:20:02,132 | INFO     | **************************************
[2026-01-27 13:20:35] 2026-01-27 18:20:02,132 | INFO     | 
[2026-01-27 13:20:35] 2026-01-27 18:20:02,139 | INFO     | architecture information:
[2026-01-27 13:20:35] 2026-01-27 18:20:02,139 | INFO     | executing command: cat /etc/os-release
[2026-01-27 13:20:35] 2026-01-27 18:20:02,187 | INFO     | cat /etc/os-release:
[2026-01-27 13:20:35] NAME="CentOS Linux"
[2026-01-27 13:20:35] VERSION="7 (Core)"
[2026-01-27 13:20:35] ID="centos"
[2026-01-27 13:20:35] ID_LIKE="rhel fedora"
[2026-01-27 13:20:35] VERSION_ID="7"
[2026-01-27 13:20:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 13:20:35] ANSI_COLOR="0;31"
[2026-01-27 13:20:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 13:20:35] HOME_URL="https://www.centos.org/"
[2026-01-27 13:20:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 13:20:35] 
[2026-01-27 13:20:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 13:20:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 13:20:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 13:20:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 13:20:35] 
[2026-01-27 13:20:35] 2026-01-27 18:20:02,187 | INFO     | **************************************
[2026-01-27 13:20:35] 2026-01-27 18:20:02,692 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-27 13:20:35] 2026-01-27 18:20:02,732 | INFO     | sufficient remaining disk space (63219695616 B)
[2026-01-27 13:20:35] 2026-01-27 18:20:02,732 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 13:20:35] 2026-01-27 18:20:02,733 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 13:20:35] 2026-01-27 18:20:02,733 | INFO     | update_server=False
[2026-01-27 13:20:35] 2026-01-27 18:20:02,733 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 13:20:35] 2026-01-27 18:20:02,733 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 13:20:35] 2026-01-27 18:20:03,168 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 13:20:35] 2026-01-27 18:20:03,169 | INFO     | aborting loop
[2026-01-27 13:20:35] 2026-01-27 18:20:03,272 | INFO     | all data control threads have been joined
[2026-01-27 13:20:35] 2026-01-27 18:20:03,617 | INFO     | all payload control threads have been joined
[2026-01-27 13:20:35] 2026-01-27 18:20:03,741 | INFO     | [job] retrieve thread has finished
[2026-01-27 13:20:35] 2026-01-27 18:20:03,830 | INFO     | [data] copytool_in thread has finished
[2026-01-27 13:20:35] 2026-01-27 18:20:03,982 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 13:20:35] 2026-01-27 18:20:04,108 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 13:20:35] 2026-01-27 18:20:04,124 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 13:20:35] 2026-01-27 18:20:04,173 | INFO     | [job] job monitor thread has finished
[2026-01-27 13:20:35] 2026-01-27 18:20:04,192 | INFO     | all job control threads have been joined
[2026-01-27 13:20:35] 2026-01-27 18:20:04,277 | INFO     | [data] control thread has finished
[2026-01-27 13:20:35] 2026-01-27 18:20:04,278 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 13:20:35] 2026-01-27 18:20:04,484 | INFO     | [payload] failed_post thread has finished
[2026-01-27 13:20:35] 2026-01-27 18:20:04,498 | INFO     | [job] validate thread has finished
[2026-01-27 13:20:35] 2026-01-27 18:20:04,623 | INFO     | [payload] control thread has finished
[2026-01-27 13:20:35] 2026-01-27 18:20:04,747 | INFO     | [data] copytool_out thread has finished
[2026-01-27 13:20:35] 2026-01-27 18:20:04,942 | INFO     | [payload] validate_post thread has finished
[2026-01-27 13:20:35] 2026-01-27 18:20:05,118 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 13:20:35] 2026-01-27 18:20:05,198 | INFO     | [job] control thread has finished
[2026-01-27 13:20:35] 2026-01-27 18:20:05,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 13:20:35] 2026-01-27 18:20:06,123 | INFO     | [job] queue monitor thread has finished
[2026-01-27 13:20:35] 2026-01-27 18:20:09,047 | INFO     | [monitor] cgroup control has ended
[2026-01-27 13:20:35] 2026-01-27 18:20:09,777 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 13:20:35] 2026-01-27 18:20:09,871 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140309689505600)>', '<ExcThread(monitor, started 140309300229888)>']
[2026-01-27 13:20:35] 2026-01-27 18:20:14,897 | INFO     | all workflow threads have been joined
[2026-01-27 13:20:35] 2026-01-27 18:20:14,898 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 13:20:35] 2026-01-27 18:20:14,898 | INFO     | traces error code: 0
[2026-01-27 13:20:35] 2026-01-27 18:20:14,898 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 13:20:35] 2026-01-27 18:20:33,653 | INFO     | PID=1690991 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 13:20:35] 2026-01-27 18:20:33,654 | INFO     | .. there are 14 such processes running
[2026-01-27 13:20:35] 2026-01-27 18:20:33,655 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 13:20:35] 2026-01-27 18:20:33,655 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 13:20:35] 2026-01-27 18:20:33,655 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 13:20:35] 2026-01-27 18:20:33,655 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 13:20:35] 2026-01-27 18:20:33,655 | CRITICAL | thread 'MainThread' is not alive
[2026-01-27 13:20:35] 2026-01-27 18:20:33,655 | INFO     | [monitor] control thread has ended
[2026-01-27 13:20:35] 2026-01-27 18:20:34,192 [wrapper] ==== pilot stdout END ====
[2026-01-27 13:20:35] 2026-01-27 18:20:34,262 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 13:20:35] 2026-01-27 18:20:34,326 [wrapper] pilotpid: 1690991
[2026-01-27 13:20:35] 2026-01-27 18:20:34,397 [wrapper] Pilot exit status: 0
[2026-01-27 13:20:35] 2026-01-27 18:20:34,508 [wrapper] pandaids: 6984225530
[2026-01-27 13:20:35] 2026-01-27 18:20:34,618 [wrapper] cleanup supervisor_pilot 3298282 1690992
[2026-01-27 13:20:35] 2026-01-27 18:20:34,644 [wrapper] Test setup, not cleaning
[2026-01-27 13:20:35] 2026-01-27 18:20:34,692 [wrapper] apfmon messages muted
[2026-01-27 13:20:35] 2026-01-27 18:20:34,701 [wrapper] ==== wrapper stdout END ====
[2026-01-27 13:20:35] 2026-01-27 18:20:34,722 [wrapper] ==== wrapper stderr END ====
[2026-01-27 13:20:35]  *** Error codes and diagnostics ***
[2026-01-27 13:20:35]     "exeErrorCode": 0,
[2026-01-27 13:20:35]     "exeErrorDiag": "",
[2026-01-27 13:20:35]     "pilotErrorCode": 0,
[2026-01-27 13:20:35]     "pilotErrorDiag": "",
[2026-01-27 13:20:35]  *** Listing of results directory ***
[2026-01-27 13:20:35] total 685476
[2026-01-27 13:20:35] -rw-r--r--. 1 boincer umatlas    584422 Jan 26 04:48 pilot3.tar.gz
[2026-01-27 13:20:35] -rwx------. 1 boincer umatlas     36322 Jan 26 04:49 runpilot2-wrapper.sh
[2026-01-27 13:20:35] -rw-r--r--. 1 boincer umatlas      5111 Jan 26 04:50 queuedata.json
[2026-01-27 13:20:35] -rw-r--r--. 1 boincer umatlas       100 Jan 27 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 13:20:35] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 27 00:02 run_atlas
[2026-01-27 13:20:35] -rw-r--r--. 1 boincer umatlas       105 Jan 27 00:02 job.xml
[2026-01-27 13:20:35] -rw-r--r--. 2 boincer umatlas 497007230 Jan 27 00:02 EVNT.48317929._000064.pool.root.1
[2026-01-27 13:20:35] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 00:02 start_atlas.sh
[2026-01-27 13:20:35] drwxrwx--x. 2 boincer umatlas      4096 Jan 27 00:02 shared
[2026-01-27 13:20:35] -rw-r--r--. 2 boincer umatlas    597755 Jan 27 00:02 input.tar.gz
[2026-01-27 13:20:35] -rw-r--r--. 1 boincer umatlas         0 Jan 27 00:02 boinc_lockfile
[2026-01-27 13:20:35] -rw-r--r--. 1 boincer umatlas      2506 Jan 27 00:02 pandaJob.out
[2026-01-27 13:20:35] -rw-------. 1 boincer umatlas        57 Jan 27 00:02 setup.sh.local
[2026-01-27 13:20:35] -rw-------. 1 boincer umatlas   1006441 Jan 27 00:03 agis_schedconf.cvmfs.json
[2026-01-27 13:20:35] -rw-------. 1 boincer umatlas       442 Jan 27 00:03 workernode_map.json
[2026-01-27 13:20:35] drwx------. 5 boincer umatlas      4096 Jan 27 00:03 pilot3
[2026-01-27 13:20:35] -rw-------. 1 boincer umatlas 188457353 Jan 27 13:19 HITS.48317931._001949.pool.root.1
[2026-01-27 13:20:35] -rw-r--r--. 1 boincer umatlas       530 Jan 27 13:19 boinc_task_state.xml
[2026-01-27 13:20:35] -rw-------. 1 boincer umatlas      1040 Jan 27 13:19 memory_monitor_summary.json
[2026-01-27 13:20:35] -rw-------. 1 boincer umatlas   1516246 Jan 27 13:19 agis_ddmendpoints.agis.ALL.json
[2026-01-27 13:20:35] -rw-------. 1 boincer umatlas    828158 Jan 27 13:19 log.48317931._001949.job.log.tgz.1
[2026-01-27 13:20:35] -rw-------. 1 boincer umatlas      6386 Jan 27 13:19 heartbeat.json
[2026-01-27 13:20:35] -rw-r--r--. 1 boincer umatlas      6611 Jan 27 13:20 init_data.xml
[2026-01-27 13:20:35] -rw-------. 1 boincer umatlas        95 Jan 27 13:20 pilot_heartbeat.json
[2026-01-27 13:20:35] -rw-------. 1 boincer umatlas       893 Jan 27 13:20 pilotlog.txt
[2026-01-27 13:20:35] -rw-r--r--. 1 boincer umatlas      8192 Jan 27 13:20 boinc_mmap_file
[2026-01-27 13:20:35] -rw-r--r--. 1 boincer umatlas        27 Jan 27 13:20 wrapper_checkpoint.txt
[2026-01-27 13:20:35] -rw-------. 1 boincer umatlas   5428122 Jan 27 13:20 log.48317931._001949.job.log.1
[2026-01-27 13:20:35] -rw-------. 1 boincer umatlas       357 Jan 27 13:20 output.list
[2026-01-27 13:20:35] -rw-r--r--. 1 boincer umatlas       620 Jan 27 13:20 runtime_log
[2026-01-27 13:20:35] -rw-------. 1 boincer umatlas   6277120 Jan 27 13:20 result.tar.gz
[2026-01-27 13:20:35] -rw-r--r--. 1 boincer umatlas      9342 Jan 27 13:20 runtime_log.err
[2026-01-27 13:20:35] -rw-------. 1 boincer umatlas       657 Jan 27 13:20 eBSNDmIPY48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCc9KDmf9PTAn.diag
[2026-01-27 13:20:35] -rw-r--r--. 1 boincer umatlas     21420 Jan 27 13:20 stderr.txt
[2026-01-27 13:20:35] HITS file was successfully produced:
[2026-01-27 13:20:35] -rw-------. 1 boincer umatlas 188457353 Jan 27 13:19 shared/HITS.pool.root.1
[2026-01-27 13:20:35]  *** Contents of shared directory: ***
[2026-01-27 13:20:35] total 676144
[2026-01-27 13:20:35] -rw-r--r--. 2 boincer umatlas 497007230 Jan 27 00:02 ATLAS.root_0
[2026-01-27 13:20:35] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 00:02 start_atlas.sh
[2026-01-27 13:20:35] -rw-r--r--. 2 boincer umatlas    597755 Jan 27 00:02 input.tar.gz
[2026-01-27 13:20:35] -rw-------. 1 boincer umatlas 188457353 Jan 27 13:19 HITS.pool.root.1
[2026-01-27 13:20:35] -rw-------. 1 boincer umatlas   6277120 Jan 27 13:20 result.tar.gz
13:20:36 (1677553): run_atlas exited; CPU time 59478.737099
13:20:36 (1677553): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN