Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
06:57:06 (214643): wrapper (7.7.26015): starting
06:57:06 (214643): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 06:57:06] Arguments: --nthreads 4
[2026-01-26 06:57:06] Threads: 4
[2026-01-26 06:57:06] Checking for CVMFS
[2026-01-26 06:57:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 06:57:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 06:57:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 06:57:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 06:57:07] 2.13.3.0 2034755 2244 53720 155549 2 188 4874493 6144001 4571 130560 0 5371697 99.997 79234 1150 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-26 06:57:07] CVMFS is ok
[2026-01-26 06:57:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 06:57:07] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-26 06:57:07] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-26 06:57:07] Further information can be found at the LHC@home message board.
[2026-01-26 06:57:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 06:57:07] Checking for apptainer binary...
[2026-01-26 06:57:07] apptainer is not installed, using version from CVMFS
[2026-01-26 06:57:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 06:57:07] desktop-b650ef
[2026-01-26 06:57:07] apptainer works
[2026-01-26 06:57:07] Set ATHENA_PROC_NUMBER=4
[2026-01-26 06:57:07] Set ATHENA_CORE_NUMBER=4
[2026-01-26 06:57:07] Starting ATLAS job with PandaID=6984042486
[2026-01-26 06:57:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 08:15:29]  *** The last 200 lines of the pilot log: ***
[2026-01-26 08:15:29]  lfn=log.47929392._005187.job.log.tgz.1
[2026-01-26 08:15:29]  mtime=0
[2026-01-26 08:15:29]  protocol_id=None
[2026-01-26 08:15:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 08:15:29]  replicas=None
[2026-01-26 08:15:29]  scope=mc23_13p6TeV
[2026-01-26 08:15:29]  status=None
[2026-01-26 08:15:29]  status_code=0
[2026-01-26 08:15:29]  storage_token=
[2026-01-26 08:15:29]  surl=/var/lib/boinc-client/slots/10/PanDA_Pilot-6984042486/log.47929392._005187.job.log.tgz.1
[2026-01-26 08:15:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/71/log.47929392._005187.job.log.tgz.1
[2026-01-26 08:15:29]  workdir=None
[2026-01-26 08:15:29] ]
[2026-01-26 08:15:29] 2026-01-26 16:14:19,636 | INFO     | transferring file log.47929392._005187.job.log.tgz.1 from /var/lib/boinc-client/slots/10/PanDA_Pilot-6984042486/log.47929392._005187.job.log.tgz.1 to /var/lib/boin
[2026-01-26 08:15:29] 2026-01-26 16:14:19,636 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/10/PanDA_Pilot-6984042486/log.47929392._005187.job.log.tgz.1 /var/lib/boinc-client/slots/10/log.4792
[2026-01-26 08:15:29] 2026-01-26 16:14:19,648 | INFO     | adding to output.list: log.47929392._005187.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/71/log.47929392._005187.job.log.tg
[2026-01-26 08:15:29] 2026-01-26 16:14:19,648 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 08:15:29] 2026-01-26 16:14:19,648 | INFO     | summary of transferred files:
[2026-01-26 08:15:29] 2026-01-26 16:14:19,648 | INFO     |  -- lfn=log.47929392._005187.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 08:15:29] 2026-01-26 16:14:19,649 | INFO     | stage-out finished correctly
[2026-01-26 08:15:29] 2026-01-26 16:14:20,724 | INFO     | time since job start (4624s) is within the limit (349056.0s)
[2026-01-26 08:15:29] 2026-01-26 16:14:22,458 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 08:15:29] 2026-01-26 16:14:22,729 | INFO     | time since job start (4626s) is within the limit (349056.0s)
[2026-01-26 08:15:29] 2026-01-26 16:14:23,841 | INFO     | PID=218508 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 08:15:29] 2026-01-26 16:14:23,841 | INFO     | .. there are 6 such processes running
[2026-01-26 08:15:29] 2026-01-26 16:14:24,747 | INFO     | job 6984042486 has state=finished
[2026-01-26 08:15:29] 2026-01-26 16:14:24,747 | INFO     | preparing for final server update for job 6984042486 in state='finished'
[2026-01-26 08:15:29] 2026-01-26 16:14:24,747 | INFO     | reading metadata from: /var/lib/boinc-client/slots/10/PanDA_Pilot-6984042486/jobReport.json
[2026-01-26 08:15:29] 2026-01-26 16:14:24,749 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/10/workernode_map.json
[2026-01-26 08:15:29] 2026-01-26 16:14:24,749 | INFO     | this job has now completed (state=finished)
[2026-01-26 08:15:29] 2026-01-26 16:14:24,749 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 08:15:29] 2026-01-26 16:14:24,749 | INFO     | log transfer has been attempted: DONE
[2026-01-26 08:15:29] 2026-01-26 16:14:24,749 | INFO     | job 6984042486 has finished - writing final server update
[2026-01-26 08:15:29] 2026-01-26 16:14:24,749 | INFO     | total number of processed events: 400 (read)
[2026-01-26 08:15:29] 2026-01-26 16:14:24,753 | INFO     | using path: /var/lib/boinc-client/slots/10/PanDA_Pilot-6984042486/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 08:15:29] 2026-01-26 16:14:24,753 | INFO     | extracted standard info from prmon json
[2026-01-26 08:15:29] 2026-01-26 16:14:24,753 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 08:15:29] 2026-01-26 16:14:24,753 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 08:15:29] 2026-01-26 16:14:24,753 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 08:15:29] 2026-01-26 16:14:24,753 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 08:15:29] 2026-01-26 16:14:24,754 | INFO     | fitting pss+swap vs Time
[2026-01-26 08:15:29] 2026-01-26 16:14:24,754 | INFO     | sum of square deviations: 101843770.0
[2026-01-26 08:15:29] 2026-01-26 16:14:24,754 | INFO     | sum of deviations: -686508274.0000004
[2026-01-26 08:15:29] 2026-01-26 16:14:24,754 | INFO     | mean x: 1769441832.0
[2026-01-26 08:15:29] 2026-01-26 16:14:24,754 | INFO     | mean y: 2355325.188405797
[2026-01-26 08:15:29] 2026-01-26 16:14:24,754 | INFO     | intersect: 11929805163.599913
[2026-01-26 08:15:29] 2026-01-26 16:14:24,754 | INFO     | chi2: 0.010623802909623552
[2026-01-26 08:15:29] 2026-01-26 16:14:24,754 | INFO     | current memory leak: -6.74 B/s (using 69 data points, chi2=0.01)
[2026-01-26 08:15:29] 2026-01-26 16:14:24,755 | INFO     | could have reported an average CPU frequency of 4402 MHz (6 samples)
[2026-01-26 08:15:29] 2026-01-26 16:14:24,755 | INFO     | ..............................
[2026-01-26 08:15:29] 2026-01-26 16:14:24,755 | INFO     | . Timing measurements:
[2026-01-26 08:15:29] 2026-01-26 16:14:24,755 | INFO     | . get job = 0 s
[2026-01-26 08:15:29] 2026-01-26 16:14:24,755 | INFO     | . initial setup = 5 s
[2026-01-26 08:15:29] 2026-01-26 16:14:24,755 | INFO     | . payload setup = 2 s
[2026-01-26 08:15:29] 2026-01-26 16:14:24,755 | INFO     | . stage-in = 0 s
[2026-01-26 08:15:29] 2026-01-26 16:14:24,755 | INFO     | . payload execution = 4605 s
[2026-01-26 08:15:29] 2026-01-26 16:14:24,755 | INFO     | . stage-out = 0 s
[2026-01-26 08:15:29] 2026-01-26 16:14:24,755 | INFO     | . log creation = 0 s
[2026-01-26 08:15:29] 2026-01-26 16:14:24,755 | INFO     | ..............................
[2026-01-26 08:15:29] 2026-01-26 16:14:24,800 | INFO     | 
[2026-01-26 08:15:29] 2026-01-26 16:14:24,800 | INFO     | job summary report
[2026-01-26 08:15:29] 2026-01-26 16:14:24,800 | INFO     | --------------------------------------------------
[2026-01-26 08:15:29] 2026-01-26 16:14:24,800 | INFO     | PanDA job id: 6984042486
[2026-01-26 08:15:29] 2026-01-26 16:14:24,800 | INFO     | task id: 47929392
[2026-01-26 08:15:29] 2026-01-26 16:14:24,800 | INFO     | errors: (none)
[2026-01-26 08:15:29] 2026-01-26 16:14:24,800 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 08:15:29] 2026-01-26 16:14:24,800 | INFO     | pilot state: finished 
[2026-01-26 08:15:29] 2026-01-26 16:14:24,800 | INFO     | transexitcode: 0
[2026-01-26 08:15:29] 2026-01-26 16:14:24,800 | INFO     | exeerrorcode: 0
[2026-01-26 08:15:29] 2026-01-26 16:14:24,800 | INFO     | exeerrordiag: 
[2026-01-26 08:15:29] 2026-01-26 16:14:24,800 | INFO     | exitcode: 0
[2026-01-26 08:15:29] 2026-01-26 16:14:24,800 | INFO     | exitmsg: OK
[2026-01-26 08:15:29] 2026-01-26 16:14:24,800 | INFO     | cpuconsumptiontime: 17780 s
[2026-01-26 08:15:29] 2026-01-26 16:14:24,801 | INFO     | nevents: 400
[2026-01-26 08:15:29] 2026-01-26 16:14:24,801 | INFO     | neventsw: 0
[2026-01-26 08:15:29] 2026-01-26 16:14:24,801 | INFO     | pid: 223166
[2026-01-26 08:15:29] 2026-01-26 16:14:24,801 | INFO     | pgrp: 223166
[2026-01-26 08:15:29] 2026-01-26 16:14:24,801 | INFO     | corecount: 4
[2026-01-26 08:15:29] 2026-01-26 16:14:24,801 | INFO     | event service: False
[2026-01-26 08:15:29] 2026-01-26 16:14:24,801 | INFO     | sizes: {0: 2284288, 10: 2284288, 4612: 2310560, 4613: 2319574, 4615: 2319630, 4618: 2319824}
[2026-01-26 08:15:29] 2026-01-26 16:14:24,801 | INFO     | --------------------------------------------------
[2026-01-26 08:15:29] 2026-01-26 16:14:24,801 | INFO     | 
[2026-01-26 08:15:29] 2026-01-26 16:14:24,801 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/10
[2026-01-26 08:15:29] 2026-01-26 16:14:24,813 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | job 6984042486 has completed (purged errors)
[2026-01-26 08:15:29] 2026-01-26 16:14:24,814 | INFO     | overall cleanup function is called
[2026-01-26 08:15:29] 2026-01-26 16:14:25,821 | INFO     | --- collectZombieJob: --- 10, [223166]
[2026-01-26 08:15:29] 2026-01-26 16:14:25,821 | INFO     | zombie collector waiting for pid 223166
[2026-01-26 08:15:29] 2026-01-26 16:14:25,821 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 08:15:29] 2026-01-26 16:14:25,821 | INFO     | collected zombie processes
[2026-01-26 08:15:29] 2026-01-26 16:14:25,821 | INFO     | will attempt to kill all subprocesses of pid=223166
[2026-01-26 08:15:29] 2026-01-26 16:14:25,914 | INFO     | process IDs to be killed: [223166] (in reverse order)
[2026-01-26 08:15:29] 2026-01-26 16:14:25,960 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 08:15:29] 2026-01-26 16:14:25,960 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 08:15:29] 2026-01-26 16:14:25,966 | INFO     | did not find any defunct processes belonging to 223166
[2026-01-26 08:15:29] 2026-01-26 16:14:25,972 | INFO     | did not find any defunct processes belonging to 223166
[2026-01-26 08:15:29] 2026-01-26 16:14:25,972 | INFO     | ready for new job
[2026-01-26 08:15:29] 2026-01-26 16:14:25,973 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 08:15:29] 2026-01-26 16:14:25,973 | INFO     | **************************************
[2026-01-26 08:15:29] 2026-01-26 16:14:25,974 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 08:15:29] 2026-01-26 16:14:25,974 | INFO     | **************************************
[2026-01-26 08:15:29] 2026-01-26 16:14:25,974 | INFO     | 
[2026-01-26 08:15:29] 2026-01-26 16:14:25,975 | INFO     | architecture information:
[2026-01-26 08:15:29] 2026-01-26 16:14:25,975 | INFO     | executing command: cat /etc/os-release
[2026-01-26 08:15:29] 2026-01-26 16:14:25,984 | INFO     | cat /etc/os-release:
[2026-01-26 08:15:29] NAME="CentOS Linux"
[2026-01-26 08:15:29] VERSION="7 (Core)"
[2026-01-26 08:15:29] ID="centos"
[2026-01-26 08:15:29] ID_LIKE="rhel fedora"
[2026-01-26 08:15:29] VERSION_ID="7"
[2026-01-26 08:15:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 08:15:29] ANSI_COLOR="0;31"
[2026-01-26 08:15:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 08:15:29] HOME_URL="https://www.centos.org/"
[2026-01-26 08:15:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 08:15:29] 
[2026-01-26 08:15:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 08:15:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 08:15:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 08:15:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 08:15:29] 
[2026-01-26 08:15:29] 2026-01-26 16:14:25,984 | INFO     | **************************************
[2026-01-26 08:15:29] 2026-01-26 16:14:26,064 | WARNING  | process 223166 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 08:15:29] 2026-01-26 16:14:26,129 | INFO     | using path: /var/lib/boinc-client/slots/10/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 08:15:29] 2026-01-26 16:14:26,219 | INFO     | number of running child processes to parent process 223166: 1
[2026-01-26 08:15:29] 2026-01-26 16:14:26,220 | INFO     | maximum number of monitored processes: 6
[2026-01-26 08:15:29] 2026-01-26 16:14:26,220 | INFO     | aborting job monitoring since job object (job id=6984042486) has expired
[2026-01-26 08:15:29] 2026-01-26 16:14:26,486 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/10
[2026-01-26 08:15:29] 2026-01-26 16:14:26,497 | INFO     | sufficient remaining disk space (408864948224 B)
[2026-01-26 08:15:29] 2026-01-26 16:14:26,497 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 08:15:29] 2026-01-26 16:14:26,497 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 08:15:29] 2026-01-26 16:14:26,497 | INFO     | update_server=False
[2026-01-26 08:15:29] 2026-01-26 16:14:26,497 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 08:15:29] 2026-01-26 16:14:26,497 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 08:15:29] 2026-01-26 16:14:26,497 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 08:15:29] 2026-01-26 16:14:26,498 | INFO     | will abort loop
[2026-01-26 08:15:29] 2026-01-26 16:14:27,052 | INFO     | all payload control threads have been joined
[2026-01-26 08:15:29] 2026-01-26 16:14:27,438 | INFO     | all data control threads have been joined
[2026-01-26 08:15:29] 2026-01-26 16:14:27,502 | INFO     | [job] job monitor thread has finished
[2026-01-26 08:15:29] 2026-01-26 16:14:27,502 | INFO     | [job] retrieve thread has finished
[2026-01-26 08:15:29] 2026-01-26 16:14:27,502 | INFO     | [job] queue monitor thread has finished
[2026-01-26 08:15:29] 2026-01-26 16:14:27,526 | INFO     | [data] copytool_in thread has finished
[2026-01-26 08:15:29] 2026-01-26 16:14:27,702 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 08:15:29] 2026-01-26 16:14:27,770 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 08:15:29] 2026-01-26 16:14:27,811 | INFO     | all job control threads have been joined
[2026-01-26 08:15:29] 2026-01-26 16:14:28,057 | INFO     | [payload] control thread has finished
[2026-01-26 08:15:29] 2026-01-26 16:14:28,304 | INFO     | [payload] validate_post thread has finished
[2026-01-26 08:15:29] 2026-01-26 16:14:28,443 | INFO     | [data] control thread has finished
[2026-01-26 08:15:29] 2026-01-26 16:14:28,491 | INFO     | [payload] failed_post thread has finished
[2026-01-26 08:15:29] 2026-01-26 16:14:28,508 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 08:15:29] 2026-01-26 16:14:28,720 | INFO     | [job] validate thread has finished
[2026-01-26 08:15:29] 2026-01-26 16:14:28,816 | INFO     | [job] control thread has finished
[2026-01-26 08:15:29] 2026-01-26 16:14:28,862 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 08:15:29] 2026-01-26 16:14:28,885 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 08:15:29] 2026-01-26 16:14:29,707 | INFO     | [data] copytool_out thread has finished
[2026-01-26 08:15:29] 2026-01-26 16:14:32,513 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 08:15:29] 2026-01-26 16:14:36,990 | INFO     | job.realtimelogging is not enabled
[2026-01-26 08:15:29] 2026-01-26 16:14:37,995 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 08:15:29] 2026-01-26 16:14:56,003 | INFO     | PID=218508 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 08:15:29] 2026-01-26 16:14:56,003 | INFO     | .. there are 6 such processes running
[2026-01-26 08:15:29] 2026-01-26 16:14:56,003 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 08:15:29] 2026-01-26 16:14:56,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 08:15:29] 2026-01-26 16:14:56,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 08:15:29] 2026-01-26 16:15:23,826 | INFO     | [monitor] cgroup control has ended
[2026-01-26 08:15:29] 2026-01-26 16:15:24,671 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134099937089344)>', '<ExcThread(monitor, started 134099373106944)>']
[2026-01-26 08:15:29] 2026-01-26 16:15:25,142 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 08:15:29] 2026-01-26 16:15:25,142 | INFO     | [monitor] control thread has ended
[2026-01-26 08:15:29] 2026-01-26 16:15:29,696 | INFO     | all workflow threads have been joined
[2026-01-26 08:15:29] 2026-01-26 16:15:29,696 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 08:15:29] 2026-01-26 16:15:29,696 | INFO     | traces error code: 0
[2026-01-26 08:15:29] 2026-01-26 16:15:29,696 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 08:15:29] 2026-01-26 16:15:29,887 [wrapper] ==== pilot stdout END ====
[2026-01-26 08:15:29] 2026-01-26 16:15:29,888 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 08:15:29] 2026-01-26 16:15:29,890 [wrapper] pilotpid: 218508
[2026-01-26 08:15:29] 2026-01-26 16:15:29,892 [wrapper] Pilot exit status: 0
[2026-01-26 08:15:29] 2026-01-26 16:15:29,899 [wrapper] pandaids: 6984042486
[2026-01-26 08:15:29] 2026-01-26 16:15:29,929 [wrapper] cleanup supervisor_pilot  301558 218509
[2026-01-26 08:15:29] 2026-01-26 16:15:29,931 [wrapper] Test setup, not cleaning
[2026-01-26 08:15:29] 2026-01-26 16:15:29,932 [wrapper] apfmon messages muted
[2026-01-26 08:15:29] 2026-01-26 16:15:29,933 [wrapper] ==== wrapper stdout END ====
[2026-01-26 08:15:29] 2026-01-26 16:15:29,934 [wrapper] ==== wrapper stderr END ====
[2026-01-26 08:15:29]  *** Error codes and diagnostics ***
[2026-01-26 08:15:29]     "exeErrorCode": 0,
[2026-01-26 08:15:29]     "exeErrorDiag": "",
[2026-01-26 08:15:29]     "pilotErrorCode": 0,
[2026-01-26 08:15:29]     "pilotErrorDiag": "",
[2026-01-26 08:15:29]  *** Listing of results directory ***
[2026-01-26 08:15:29] total 431244
[2026-01-26 08:15:29] -rw-r--r-- 1 boinc boinc    584422 Jan 25 21:14 pilot3.tar.gz
[2026-01-26 08:15:29] -rw-r--r-- 1 boinc boinc      5111 Jan 25 21:14 queuedata.json
[2026-01-26 08:15:29] -rwx------ 1 boinc boinc     36322 Jan 25 21:14 runpilot2-wrapper.sh
[2026-01-26 08:15:29] -rw-r--r-- 1 boinc boinc       100 Jan 26 06:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 08:15:29] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 06:57 run_atlas
[2026-01-26 08:15:29] -rw-r--r-- 1 boinc boinc       105 Jan 26 06:57 job.xml
[2026-01-26 08:15:29] -rw-r--r-- 2 boinc boinc 252528317 Jan 26 06:57 EVNT.47929390._000201.pool.root.1
[2026-01-26 08:15:29] -rw-r--r-- 2 boinc boinc    597755 Jan 26 06:57 input.tar.gz
[2026-01-26 08:15:29] drwxrwx--x 2 boinc boinc      4096 Jan 26 06:57 shared
[2026-01-26 08:15:29] -rw-r--r-- 1 boinc boinc         0 Jan 26 06:57 boinc_setup_complete
[2026-01-26 08:15:29] -rw-r--r-- 2 boinc boinc     15845 Jan 26 06:57 start_atlas.sh
[2026-01-26 08:15:29] -rw-r--r-- 1 boinc boinc     10205 Jan 26 06:57 init_data.xml
[2026-01-26 08:15:29] -rw-r--r-- 1 boinc boinc         0 Jan 26 06:57 boinc_lockfile
[2026-01-26 08:15:29] -rw-r--r-- 1 boinc boinc      2550 Jan 26 06:57 pandaJob.out
[2026-01-26 08:15:29] -rw------- 1 boinc boinc   1002189 Jan 26 06:57 agis_schedconf.cvmfs.json
[2026-01-26 08:15:29] -rw------- 1 boinc boinc   1516246 Jan 26 06:57 agis_ddmendpoints.agis.ALL.json
[2026-01-26 08:15:29] -rw------- 1 boinc boinc       424 Jan 26 06:57 workernode_map.json
[2026-01-26 08:15:29] drwx------ 5 boinc boinc      4096 Jan 26 06:57 pilot3
[2026-01-26 08:15:29] -rw------- 1 boinc boinc 183212168 Jan 26 08:14 HITS.47929392._005187.pool.root.1
[2026-01-26 08:15:29] -rw-r--r-- 1 boinc boinc       529 Jan 26 08:14 boinc_task_state.xml
[2026-01-26 08:15:29] -rw------- 1 boinc boinc        95 Jan 26 08:14 pilot_heartbeat.json
[2026-01-26 08:15:29] -rw------- 1 boinc boinc      1023 Jan 26 08:14 memory_monitor_summary.json
[2026-01-26 08:15:29] -rw------- 1 boinc boinc    260899 Jan 26 08:14 log.47929392._005187.job.log.tgz.1
[2026-01-26 08:15:29] -rw------- 1 boinc boinc      6291 Jan 26 08:14 heartbeat.json
[2026-01-26 08:15:29] -rw-r--r-- 1 boinc boinc        27 Jan 26 08:15 wrapper_checkpoint.txt
[2026-01-26 08:15:29] -rw-r--r-- 1 boinc boinc      8192 Jan 26 08:15 boinc_mmap_file
[2026-01-26 08:15:29] -rw------- 1 boinc boinc      5426 Jan 26 08:15 pilotlog.txt
[2026-01-26 08:15:29] -rw------- 1 boinc boinc    695816 Jan 26 08:15 log.47929392._005187.job.log.1
[2026-01-26 08:15:29] -rw------- 1 boinc boinc       357 Jan 26 08:15 output.list
[2026-01-26 08:15:29] -rw-r--r-- 1 boinc boinc       620 Jan 26 08:15 runtime_log
[2026-01-26 08:15:29] -rw------- 1 boinc boinc    972800 Jan 26 08:15 result.tar.gz
[2026-01-26 08:15:29] -rw------- 1 boinc boinc       655 Jan 26 08:15 KwDNDmy6T48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsV2KDm6slnTn.diag
[2026-01-26 08:15:29] -rw-r--r-- 1 boinc boinc      8963 Jan 26 08:15 runtime_log.err
[2026-01-26 08:15:29] -rw-r--r-- 1 boinc boinc     21841 Jan 26 08:15 stderr.txt
[2026-01-26 08:15:29] HITS file was successfully produced:
[2026-01-26 08:15:29] -rw------- 1 boinc boinc 183212168 Jan 26 08:14 shared/HITS.pool.root.1
[2026-01-26 08:15:29]  *** Contents of shared directory: ***
[2026-01-26 08:15:29] total 427092
[2026-01-26 08:15:29] -rw-r--r-- 2 boinc boinc 252528317 Jan 26 06:57 ATLAS.root_0
[2026-01-26 08:15:29] -rw-r--r-- 2 boinc boinc    597755 Jan 26 06:57 input.tar.gz
[2026-01-26 08:15:29] -rw-r--r-- 2 boinc boinc     15845 Jan 26 06:57 start_atlas.sh
[2026-01-26 08:15:29] -rw------- 1 boinc boinc 183212168 Jan 26 08:14 HITS.pool.root.1
[2026-01-26 08:15:29] -rw------- 1 boinc boinc    972800 Jan 26 08:15 result.tar.gz
08:15:31 (214643): run_atlas exited; CPU time 17828.648705
08:15:31 (214643): called boinc_finish(0)

</stderr_txt>
]]>

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