Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:33:58 (42661): wrapper (7.7.26015): starting
09:33:58 (42661): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 09:33:58] Arguments: --nthreads 8
[2026-01-26 09:33:58] Threads: 8
[2026-01-26 09:33:58] Checking for CVMFS
[2026-01-26 09:33:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 09:33:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 09:33:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 09:34:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 09:34:01] 2.13.3.0 9597 47264 182956 155549 3 631 33975869 40960000 30838 16776704 0 320039470 99.715 238840431 46373 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 09:34:01] CVMFS is ok
[2026-01-26 09:34:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 09:34:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 09:34:01] Further information can be found at the LHC@home message board.
[2026-01-26 09:34:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 09:34:01] Checking for apptainer binary...
[2026-01-26 09:34:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 09:34:01] Running /usr/bin/apptainer --version
[2026-01-26 09:34:01] apptainer version 1.4.5-2.el9
[2026-01-26 09:34:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 09:34:02] c-208-38.aglt2.org
[2026-01-26 09:34:02] apptainer works
[2026-01-26 09:34:02] Set ATHENA_PROC_NUMBER=8
[2026-01-26 09:34:02] Set ATHENA_CORE_NUMBER=8
[2026-01-26 09:34:02] Starting ATLAS job with PandaID=6984042372
[2026-01-26 09:34:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 12:04:15]  *** The last 200 lines of the pilot log: ***
[2026-01-26 12:04:15] 2026-01-26 17:03:39,598 | INFO     | number of running child processes to parent process 74147: 1
[2026-01-26 12:04:15] 2026-01-26 17:03:39,598 | INFO     | maximum number of monitored processes: 6
[2026-01-26 12:04:15] 2026-01-26 17:03:40,052 | INFO     | job 6984042372 has state=finished
[2026-01-26 12:04:15] 2026-01-26 17:03:40,052 | INFO     | preparing for final server update for job 6984042372 in state='finished'
[2026-01-26 12:04:15] 2026-01-26 17:03:40,052 | INFO     | reading metadata from: /tmp/boinchome/slots/6/PanDA_Pilot-6984042372/jobReport.json
[2026-01-26 12:04:15] 2026-01-26 17:03:40,054 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/6/workernode_map.json
[2026-01-26 12:04:15] 2026-01-26 17:03:40,054 | INFO     | this job has now completed (state=finished)
[2026-01-26 12:04:15] 2026-01-26 17:03:40,054 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 12:04:15] 2026-01-26 17:03:40,054 | INFO     | log transfer has been attempted: DONE
[2026-01-26 12:04:15] 2026-01-26 17:03:40,054 | INFO     | job 6984042372 has finished - writing final server update
[2026-01-26 12:04:15] 2026-01-26 17:03:40,055 | INFO     | total number of processed events: 400 (read)
[2026-01-26 12:04:15] 2026-01-26 17:03:40,077 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6984042372/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 12:04:15] 2026-01-26 17:03:40,078 | INFO     | extracted standard info from prmon json
[2026-01-26 12:04:15] 2026-01-26 17:03:40,078 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 12:04:15] 2026-01-26 17:03:40,078 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 12:04:15] 2026-01-26 17:03:40,078 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 12:04:15] 2026-01-26 17:03:40,078 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 12:04:15] 2026-01-26 17:03:40,079 | INFO     | fitting pss+swap vs Time
[2026-01-26 12:04:15] 2026-01-26 17:03:40,080 | INFO     | sum of square deviations: 945282840.0
[2026-01-26 12:04:15] 2026-01-26 17:03:40,080 | INFO     | sum of deviations: 28964052269.000004
[2026-01-26 12:04:15] 2026-01-26 17:03:40,080 | INFO     | mean x: 1769442605.0
[2026-01-26 12:04:15] 2026-01-26 17:03:40,080 | INFO     | mean y: 2442872.8827586207
[2026-01-26 12:04:15] 2026-01-26 17:03:40,080 | INFO     | intersect: -54214375553.88094
[2026-01-26 12:04:15] 2026-01-26 17:03:40,080 | INFO     | chi2: 3.6070464805057685
[2026-01-26 12:04:15] 2026-01-26 17:03:40,080 | INFO     | sum of square deviations: 850825255.0
[2026-01-26 12:04:15] 2026-01-26 17:03:40,081 | INFO     | sum of deviations: 37293986294.5
[2026-01-26 12:04:15] 2026-01-26 17:03:40,081 | INFO     | mean x: 1769442452.5
[2026-01-26 12:04:15] 2026-01-26 17:03:40,081 | INFO     | mean y: 2455884.0785714285
[2026-01-26 12:04:15] 2026-01-26 17:03:40,081 | INFO     | intersect: -77557022028.27075
[2026-01-26 12:04:15] 2026-01-26 17:03:40,081 | INFO     | chi2: 2.8526385829817116
[2026-01-26 12:04:15] 2026-01-26 17:03:40,081 | INFO     | current chi2=2.8526385829817116 (change=20.914837155585424 %)
[2026-01-26 12:04:15] 2026-01-26 17:03:40,081 | INFO     | right removable region: 139
[2026-01-26 12:04:15] 2026-01-26 17:03:40,081 | INFO     | sum of square deviations: 850825255.0
[2026-01-26 12:04:15] 2026-01-26 17:03:40,082 | INFO     | sum of deviations: -7289151690.0
[2026-01-26 12:04:15] 2026-01-26 17:03:40,082 | INFO     | mean x: 1769442757.5
[2026-01-26 12:04:15] 2026-01-26 17:03:40,082 | INFO     | mean y: 2500972.342857143
[2026-01-26 12:04:15] 2026-01-26 17:03:40,082 | INFO     | intersect: 15161591032.72122
[2026-01-26 12:04:15] 2026-01-26 17:03:40,082 | INFO     | chi2: 0.8732627286839036
[2026-01-26 12:04:15] 2026-01-26 17:03:40,082 | INFO     | current chi2=0.8732627286839036 (change=75.79008938744096 %)
[2026-01-26 12:04:15] 2026-01-26 17:03:40,082 | INFO     | sum of square deviations: 762879420.0
[2026-01-26 12:04:15] 2026-01-26 17:03:40,082 | INFO     | sum of deviations: -10998667708.000002
[2026-01-26 12:04:15] 2026-01-26 17:03:40,082 | INFO     | mean x: 1769442910.0
[2026-01-26 12:04:15] 2026-01-26 17:03:40,083 | INFO     | mean y: 2507265.725925926
[2026-01-26 12:04:15] 2026-01-26 17:03:40,083 | INFO     | intersect: 25513111019.287075
[2026-01-26 12:04:15] 2026-01-26 17:03:40,083 | INFO     | chi2: 0.8146950753287061
[2026-01-26 12:04:15] 2026-01-26 17:03:40,083 | INFO     | current chi2=0.8146950753287061 (change=6.706762058133981 %)
[2026-01-26 12:04:15] 2026-01-26 17:03:40,083 | INFO     | left removable region: 20
[2026-01-26 12:04:15] 2026-01-26 17:03:40,083 | INFO     | sum of square deviations: 522502820.0
[2026-01-26 12:04:15] 2026-01-26 17:03:40,083 | INFO     | sum of deviations: -720973151.9999999
[2026-01-26 12:04:15] 2026-01-26 17:03:40,083 | INFO     | mean x: 1769443032.0
[2026-01-26 12:04:15] 2026-01-26 17:03:40,083 | INFO     | mean y: 2521183.3865546216
[2026-01-26 12:04:15] 2026-01-26 17:03:40,083 | INFO     | intersect: 2444079144.8641148
[2026-01-26 12:04:15] 2026-01-26 17:03:40,083 | INFO     | chi2: 0.005858976682478171
[2026-01-26 12:04:15] 2026-01-26 17:03:40,083 | INFO     | current memory leak: -1.38 B/s (using 119 data points, chi2=0.01)
[2026-01-26 12:04:15] 2026-01-26 17:03:40,084 | INFO     | could have reported an average CPU frequency of 3799 MHz (8 samples)
[2026-01-26 12:04:15] 2026-01-26 17:03:40,084 | INFO     | ..............................
[2026-01-26 12:04:15] 2026-01-26 17:03:40,084 | INFO     | . Timing measurements:
[2026-01-26 12:04:15] 2026-01-26 17:03:40,084 | INFO     | . get job = 0 s
[2026-01-26 12:04:15] 2026-01-26 17:03:40,084 | INFO     | . initial setup = 32 s
[2026-01-26 12:04:15] 2026-01-26 17:03:40,084 | INFO     | . payload setup = 40 s
[2026-01-26 12:04:15] 2026-01-26 17:03:40,084 | INFO     | . stage-in = 0 s
[2026-01-26 12:04:15] 2026-01-26 17:03:40,084 | INFO     | . payload execution = 8827 s
[2026-01-26 12:04:15] 2026-01-26 17:03:40,084 | INFO     | . stage-out = 2 s
[2026-01-26 12:04:15] 2026-01-26 17:03:40,084 | INFO     | . log creation = 0 s
[2026-01-26 12:04:15] 2026-01-26 17:03:40,084 | INFO     | ..............................
[2026-01-26 12:04:15] 2026-01-26 17:03:40,198 | INFO     | 
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | job summary report
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | --------------------------------------------------
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | PanDA job id: 6984042372
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | task id: 47929392
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | errors: (none)
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | pilot state: finished 
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | transexitcode: 0
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | exeerrorcode: 0
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | exeerrordiag: 
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | exitcode: 0
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | exitmsg: OK
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | cpuconsumptiontime: 23253 s
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | nevents: 400
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | neventsw: 0
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | pid: 74147
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | pgrp: 74147
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | corecount: 8
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | event service: False
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | sizes: {0: 2283847, 1: 2284308, 2: 2284308, 8872: 2312295, 8875: 2321293, 8878: 2321377, 8881: 2321699}
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | --------------------------------------------------
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | 
[2026-01-26 12:04:15] 2026-01-26 17:03:40,199 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2026-01-26 12:04:15] 2026-01-26 17:03:40,303 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 12:04:15] 2026-01-26 17:03:40,303 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 12:04:15] 2026-01-26 17:03:40,303 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 12:04:15] 2026-01-26 17:03:40,303 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 12:04:15] 2026-01-26 17:03:40,303 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 12:04:15] 2026-01-26 17:03:40,303 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 12:04:15] 2026-01-26 17:03:40,303 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 12:04:15] 2026-01-26 17:03:40,303 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 12:04:15] 2026-01-26 17:03:40,303 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 12:04:15] 2026-01-26 17:03:40,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 12:04:15] 2026-01-26 17:03:40,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 12:04:15] 2026-01-26 17:03:40,304 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 12:04:15] 2026-01-26 17:03:40,304 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 12:04:15] 2026-01-26 17:03:40,304 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 12:04:15] 2026-01-26 17:03:40,304 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 12:04:15] 2026-01-26 17:03:40,304 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 12:04:15] 2026-01-26 17:03:40,305 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 12:04:15] 2026-01-26 17:03:40,305 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 12:04:15] 2026-01-26 17:03:40,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 12:04:15] 2026-01-26 17:03:40,305 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 12:04:15] 2026-01-26 17:03:40,306 | INFO     | job 6984042372 has completed (purged errors)
[2026-01-26 12:04:15] 2026-01-26 17:03:40,306 | INFO     | overall cleanup function is called
[2026-01-26 12:04:15] 2026-01-26 17:03:41,318 | INFO     | --- collectZombieJob: --- 10, [74147]
[2026-01-26 12:04:15] 2026-01-26 17:03:41,318 | INFO     | zombie collector waiting for pid 74147
[2026-01-26 12:04:15] 2026-01-26 17:03:41,318 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 12:04:15] 2026-01-26 17:03:41,318 | INFO     | collected zombie processes
[2026-01-26 12:04:15] 2026-01-26 17:03:41,318 | INFO     | will attempt to kill all subprocesses of pid=74147
[2026-01-26 12:04:15] 2026-01-26 17:03:42,642 | INFO     | process IDs to be killed: [74147] (in reverse order)
[2026-01-26 12:04:15] 2026-01-26 17:03:43,198 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 12:04:15] 2026-01-26 17:03:43,201 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 12:04:15] 2026-01-26 17:03:43,254 | INFO     | did not find any defunct processes belonging to 74147
[2026-01-26 12:04:15] 2026-01-26 17:03:43,309 | INFO     | did not find any defunct processes belonging to 74147
[2026-01-26 12:04:15] 2026-01-26 17:03:43,309 | INFO     | ready for new job
[2026-01-26 12:04:15] 2026-01-26 17:03:43,310 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 12:04:15] 2026-01-26 17:03:43,311 | INFO     | **************************************
[2026-01-26 12:04:15] 2026-01-26 17:03:43,311 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 12:04:15] 2026-01-26 17:03:43,311 | INFO     | **************************************
[2026-01-26 12:04:15] 2026-01-26 17:03:43,311 | INFO     | 
[2026-01-26 12:04:15] 2026-01-26 17:03:43,352 | INFO     | architecture information:
[2026-01-26 12:04:15] 2026-01-26 17:03:43,356 | INFO     | executing command: cat /etc/os-release
[2026-01-26 12:04:15] 2026-01-26 17:03:43,400 | INFO     | cat /etc/os-release:
[2026-01-26 12:04:15] NAME="CentOS Linux"
[2026-01-26 12:04:15] VERSION="7 (Core)"
[2026-01-26 12:04:15] ID="centos"
[2026-01-26 12:04:15] ID_LIKE="rhel fedora"
[2026-01-26 12:04:15] VERSION_ID="7"
[2026-01-26 12:04:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 12:04:15] ANSI_COLOR="0;31"
[2026-01-26 12:04:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 12:04:15] HOME_URL="https://www.centos.org/"
[2026-01-26 12:04:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 12:04:15] 
[2026-01-26 12:04:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 12:04:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 12:04:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 12:04:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 12:04:15] 
[2026-01-26 12:04:15] 2026-01-26 17:03:43,400 | INFO     | **************************************
[2026-01-26 12:04:15] 2026-01-26 17:03:43,904 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-01-26 12:04:15] 2026-01-26 17:03:43,992 | INFO     | sufficient remaining disk space (168402354176 B)
[2026-01-26 12:04:15] 2026-01-26 17:03:43,992 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 12:04:15] 2026-01-26 17:03:43,992 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 12:04:15] 2026-01-26 17:03:43,992 | INFO     | update_server=False
[2026-01-26 12:04:15] 2026-01-26 17:03:43,993 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 12:04:15] 2026-01-26 17:03:43,993 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 12:04:15] 2026-01-26 17:03:43,993 | INFO     | aborting loop
[2026-01-26 12:04:15] 2026-01-26 17:03:43,993 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 12:04:15] 2026-01-26 17:03:44,015 | INFO     | all payload control threads have been joined
[2026-01-26 12:04:15] 2026-01-26 17:03:44,154 | INFO     | all job control threads have been joined
[2026-01-26 12:04:15] 2026-01-26 17:03:44,923 | INFO     | all data control threads have been joined
[2026-01-26 12:04:15] 2026-01-26 17:03:45,001 | INFO     | [job] retrieve thread has finished
[2026-01-26 12:04:15] 2026-01-26 17:03:45,001 | INFO     | [job] job monitor thread has finished
[2026-01-26 12:04:15] 2026-01-26 17:03:45,021 | INFO     | [payload] control thread has finished
[2026-01-26 12:04:15] 2026-01-26 17:03:45,161 | INFO     | [job] control thread has finished
[2026-01-26 12:04:15] 2026-01-26 17:03:45,178 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 12:04:15] 2026-01-26 17:03:45,240 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 12:04:15] 2026-01-26 17:03:45,390 | INFO     | [payload] failed_post thread has finished
[2026-01-26 12:04:15] 2026-01-26 17:03:45,423 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 12:04:15] 2026-01-26 17:03:45,850 | INFO     | [payload] validate_post thread has finished
[2026-01-26 12:04:15] 2026-01-26 17:03:45,930 | INFO     | [data] control thread has finished
[2026-01-26 12:04:15] 2026-01-26 17:03:46,199 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 12:04:15] 2026-01-26 17:03:46,224 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 12:04:15] 2026-01-26 17:03:46,224 | INFO     | [job] validate thread has finished
[2026-01-26 12:04:15] 2026-01-26 17:03:46,246 | INFO     | [job] queue monitor thread has finished
[2026-01-26 12:04:15] 2026-01-26 17:03:46,319 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 12:04:15] 2026-01-26 17:03:46,400 | INFO     | [data] copytool_in thread has finished
[2026-01-26 12:04:15] 2026-01-26 17:03:47,449 | INFO     | [data] copytool_out thread has finished
[2026-01-26 12:04:15] 2026-01-26 17:03:48,012 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 12:04:15] 2026-01-26 17:03:52,322 | INFO     | [monitor] cgroup control has ended
[2026-01-26 12:04:15] 2026-01-26 17:03:53,898 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140460841363264)>', '<ExcThread(monitor, started 140460286781184)>']
[2026-01-26 12:04:15] 2026-01-26 17:03:58,924 | INFO     | all workflow threads have been joined
[2026-01-26 12:04:15] 2026-01-26 17:03:58,924 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 12:04:15] 2026-01-26 17:03:58,924 | INFO     | traces error code: 0
[2026-01-26 12:04:15] 2026-01-26 17:03:58,924 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 12:04:15] 2026-01-26 17:04:13,976 | INFO     | PID=59452 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 12:04:15] 2026-01-26 17:04:13,976 | INFO     | .. there are 32 such processes running
[2026-01-26 12:04:15] 2026-01-26 17:04:13,977 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 12:04:15] 2026-01-26 17:04:13,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 12:04:15] 2026-01-26 17:04:13,977 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 12:04:15] 2026-01-26 17:04:13,977 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 12:04:15] 2026-01-26 17:04:13,977 | INFO     | [monitor] control thread has ended
[2026-01-26 12:04:15] 2026-01-26 17:04:14,135 [wrapper] ==== pilot stdout END ====
[2026-01-26 12:04:15] 2026-01-26 17:04:14,154 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 12:04:15] 2026-01-26 17:04:14,176 [wrapper] pilotpid: 59452
[2026-01-26 12:04:15] 2026-01-26 17:04:14,190 [wrapper] Pilot exit status: 0
[2026-01-26 12:04:15] 2026-01-26 17:04:14,280 [wrapper] pandaids: 6984042372
[2026-01-26 12:04:15] 2026-01-26 17:04:14,502 [wrapper] cleanup supervisor_pilot  923266 59453
[2026-01-26 12:04:15] 2026-01-26 17:04:14,512 [wrapper] Test setup, not cleaning
[2026-01-26 12:04:15] 2026-01-26 17:04:14,559 [wrapper] apfmon messages muted
[2026-01-26 12:04:15] 2026-01-26 17:04:14,590 [wrapper] ==== wrapper stdout END ====
[2026-01-26 12:04:15] 2026-01-26 17:04:14,625 [wrapper] ==== wrapper stderr END ====
[2026-01-26 12:04:15]  *** Error codes and diagnostics ***
[2026-01-26 12:04:15]     "exeErrorCode": 0,
[2026-01-26 12:04:15]     "exeErrorDiag": "",
[2026-01-26 12:04:15]     "pilotErrorCode": 0,
[2026-01-26 12:04:15]     "pilotErrorDiag": "",
[2026-01-26 12:04:15]  *** Listing of results directory ***
[2026-01-26 12:04:15] total 432280
[2026-01-26 12:04:15] -rw-r--r--. 1 boincer umatlas      5111 Jan 26 00:14 queuedata.json
[2026-01-26 12:04:15] -rw-r--r--. 1 boincer umatlas    584422 Jan 26 00:14 pilot3.tar.gz
[2026-01-26 12:04:15] -rwx------. 1 boincer umatlas     36322 Jan 26 00:14 runpilot2-wrapper.sh
[2026-01-26 12:04:15] -rw-r--r--. 1 boincer umatlas       100 Jan 26 09:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 12:04:15] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 09:33 run_atlas
[2026-01-26 12:04:15] -rw-r--r--. 1 boincer umatlas       105 Jan 26 09:33 job.xml
[2026-01-26 12:04:15] -rw-r--r--. 2 boincer umatlas 251758081 Jan 26 09:33 EVNT.47929390._000134.pool.root.1
[2026-01-26 12:04:15] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 09:33 start_atlas.sh
[2026-01-26 12:04:15] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 09:33 shared
[2026-01-26 12:04:15] -rw-r--r--. 2 boincer umatlas    597759 Jan 26 09:33 input.tar.gz
[2026-01-26 12:04:15] -rw-r--r--. 1 boincer umatlas         0 Jan 26 09:33 boinc_lockfile
[2026-01-26 12:04:15] -rw-r--r--. 1 boincer umatlas      2550 Jan 26 09:34 pandaJob.out
[2026-01-26 12:04:15] -rw-------. 1 boincer umatlas        57 Jan 26 09:34 setup.sh.local
[2026-01-26 12:04:15] -rw-------. 1 boincer umatlas   1002189 Jan 26 09:35 agis_schedconf.cvmfs.json
[2026-01-26 12:04:15] -rw-------. 1 boincer umatlas   1516246 Jan 26 09:35 agis_ddmendpoints.agis.ALL.json
[2026-01-26 12:04:15] -rw-------. 1 boincer umatlas       431 Jan 26 09:35 workernode_map.json
[2026-01-26 12:04:15] drwx------. 5 boincer umatlas      4096 Jan 26 09:35 pilot3
[2026-01-26 12:04:15] -rw-r--r--. 1 boincer umatlas      7185 Jan 26 12:01 init_data.xml
[2026-01-26 12:04:15] -rw-------. 1 boincer umatlas 183903163 Jan 26 12:02 HITS.47929392._005073.pool.root.1
[2026-01-26 12:04:15] -rw-r--r--. 1 boincer umatlas       529 Jan 26 12:03 boinc_task_state.xml
[2026-01-26 12:04:15] -rw-------. 1 boincer umatlas      1058 Jan 26 12:03 memory_monitor_summary.json
[2026-01-26 12:04:15] -rw-------. 1 boincer umatlas    387892 Jan 26 12:03 log.47929392._005073.job.log.tgz.1
[2026-01-26 12:04:15] -rw-------. 1 boincer umatlas      6343 Jan 26 12:03 heartbeat.json
[2026-01-26 12:04:15] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 12:04 boinc_mmap_file
[2026-01-26 12:04:15] -rw-r--r--. 1 boincer umatlas        27 Jan 26 12:04 wrapper_checkpoint.txt
[2026-01-26 12:04:15] -rw-------. 1 boincer umatlas        95 Jan 26 12:04 pilot_heartbeat.json
[2026-01-26 12:04:15] -rw-------. 1 boincer umatlas       821 Jan 26 12:04 pilotlog.txt
[2026-01-26 12:04:15] -rw-------. 1 boincer umatlas   1137459 Jan 26 12:04 log.47929392._005073.job.log.1
[2026-01-26 12:04:15] -rw-------. 1 boincer umatlas       357 Jan 26 12:04 output.list
[2026-01-26 12:04:15] -rw-r--r--. 1 boincer umatlas       620 Jan 26 12:04 runtime_log
[2026-01-26 12:04:15] -rw-------. 1 boincer umatlas   1546240 Jan 26 12:04 result.tar.gz
[2026-01-26 12:04:15] -rw-r--r--. 1 boincer umatlas      9341 Jan 26 12:04 runtime_log.err
[2026-01-26 12:04:15] -rw-------. 1 boincer umatlas       656 Jan 26 12:04 1rbKDmy6T48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcU2KDm8YM51n.diag
[2026-01-26 12:04:15] -rw-r--r--. 1 boincer umatlas     21217 Jan 26 12:04 stderr.txt
[2026-01-26 12:04:15] HITS file was successfully produced:
[2026-01-26 12:04:15] -rw-------. 1 boincer umatlas 183903163 Jan 26 12:02 shared/HITS.pool.root.1
[2026-01-26 12:04:15]  *** Contents of shared directory: ***
[2026-01-26 12:04:15] total 427576
[2026-01-26 12:04:15] -rw-r--r--. 2 boincer umatlas 251758081 Jan 26 09:33 ATLAS.root_0
[2026-01-26 12:04:15] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 09:33 start_atlas.sh
[2026-01-26 12:04:15] -rw-r--r--. 2 boincer umatlas    597759 Jan 26 09:33 input.tar.gz
[2026-01-26 12:04:15] -rw-------. 1 boincer umatlas 183903163 Jan 26 12:02 HITS.pool.root.1
[2026-01-26 12:04:15] -rw-------. 1 boincer umatlas   1546240 Jan 26 12:04 result.tar.gz
12:04:16 (42661): run_atlas exited; CPU time 23543.789893
12:04:16 (42661): called boinc_finish(0)

</stderr_txt>
]]>

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