Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:42:20 (796262): wrapper (7.7.26015): starting
05:42:20 (796262): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 05:42:20] Arguments: --nthreads 4
[2026-01-27 05:42:20] Threads: 4
[2026-01-27 05:42:20] Checking for CVMFS
[2026-01-27 05:42:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 05:42:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 05:42:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 05:42:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 05:42:20] 2.9.2.0 4135 3467 96604 155573 1 50 29360922 36864000 0 130560 0 1792488 99.987 133526 4086 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-27 05:42:20] CVMFS is ok
[2026-01-27 05:42:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 05:42:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 05:42:20] Further information can be found at the LHC@home message board.
[2026-01-27 05:42:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 05:42:20] Checking for apptainer binary...
[2026-01-27 05:42:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 05:42:20] Running /usr/bin/apptainer --version
[2026-01-27 05:42:20] apptainer version 1.4.1-1.1
[2026-01-27 05:42:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 05:42:20] atlasA237
[2026-01-27 05:42:20] apptainer works
[2026-01-27 05:42:20] Set ATHENA_PROC_NUMBER=4
[2026-01-27 05:42:20] Set ATHENA_CORE_NUMBER=4
[2026-01-27 05:42:20] Starting ATLAS job with PandaID=6983466672
[2026-01-27 05:42:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 07:42:55]  *** The last 200 lines of the pilot log: ***
[2026-01-27 07:42:55] 2026-01-27 06:42:26,145 | INFO     | all data control threads have been joined
[2026-01-27 07:42:55] 2026-01-27 06:42:26,474 | INFO     | [job] retrieve thread has finished
[2026-01-27 07:42:55] 2026-01-27 06:42:26,475 | INFO     | [job] queue monitor thread has finished
[2026-01-27 07:42:55] 2026-01-27 06:42:26,485 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 07:42:55] 2026-01-27 06:42:26,568 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 07:42:55] 2026-01-27 06:42:26,610 | INFO     | all payload control threads have been joined
[2026-01-27 07:42:55] 2026-01-27 06:42:26,685 | INFO     | [job] job monitor thread has finished
[2026-01-27 07:42:55] 2026-01-27 06:42:26,690 | INFO     | [data] copytool_in thread has finished
[2026-01-27 07:42:55] 2026-01-27 06:42:26,856 | INFO     | all job control threads have been joined
[2026-01-27 07:42:55] 2026-01-27 06:42:27,151 | INFO     | [data] control thread has finished
[2026-01-27 07:42:55] 2026-01-27 06:42:27,245 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 07:42:55] 2026-01-27 06:42:27,475 | INFO     | [data] copytool_out thread has finished
[2026-01-27 07:42:55] 2026-01-27 06:42:27,586 | INFO     | [payload] validate_post thread has finished
[2026-01-27 07:42:55] 2026-01-27 06:42:27,616 | INFO     | [payload] control thread has finished
[2026-01-27 07:42:55] 2026-01-27 06:42:27,822 | INFO     | [payload] failed_post thread has finished
[2026-01-27 07:42:55] 2026-01-27 06:42:27,841 | INFO     | [job] validate thread has finished
[2026-01-27 07:42:55] 2026-01-27 06:42:27,859 | INFO     | [job] control thread has finished
[2026-01-27 07:42:55] 2026-01-27 06:42:27,952 [wrapper] supervise_pilot (15 min periods counter: 9)
[2026-01-27 07:42:55] 2026-01-27 06:42:28,203 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 07:42:55] 2026-01-27 06:42:32,210 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 07:42:55] 2026-01-27 06:42:35,802 | INFO     | job.realtimelogging is not enabled
[2026-01-27 07:42:55] 2026-01-27 06:42:36,808 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 07:42:55] 2026-01-27 06:42:42,139 | INFO     | [monitor] cgroup control has ended
[2026-01-27 07:42:55] 2026-01-27 06:42:42,145 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140292007294784)>', '<ExcThread(monitor, started 140291029833472)>']
[2026-01-27 07:42:55] 2026-01-27 06:42:47,156 | INFO     | all workflow threads have been joined
[2026-01-27 07:42:55] 2026-01-27 06:42:47,157 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 07:42:55] 2026-01-27 06:42:47,157 | INFO     | traces error code: 0
[2026-01-27 07:42:55] 2026-01-27 06:42:47,157 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 07:42:55] 2026-01-27 06:42:55,540 | INFO     | PID=800404 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 07:42:55] 2026-01-27 06:42:55,540 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 07:42:55] 2026-01-27 06:42:55,540 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 07:42:55] 2026-01-27 06:42:55,540 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 07:42:55] 2026-01-27 06:42:55,540 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 07:42:55] 2026-01-27 06:42:55,540 | INFO     | [monitor] control thread has ended
[2026-01-27 07:42:55] 2026-01-27 06:42:55,609 [wrapper] ==== pilot stdout END ====
[2026-01-27 07:42:55] 2026-01-27 06:42:55,612 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 07:42:55] 2026-01-27 06:42:55,616 [wrapper] pilotpid: 800404
[2026-01-27 07:42:55] 2026-01-27 06:42:55,620 [wrapper] Pilot exit status: 0
[2026-01-27 07:42:55] 2026-01-27 06:42:55,631 [wrapper] pandaids: 6983466672
[2026-01-27 07:42:55] 2026-01-27 06:42:55,656 [wrapper] cleanup supervisor_pilot  819637 800405
[2026-01-27 07:42:55] 2026-01-27 06:42:55,660 [wrapper] Test setup, not cleaning
[2026-01-27 07:42:55] 2026-01-27 06:42:55,664 [wrapper] apfmon messages muted
[2026-01-27 07:42:55] 2026-01-27 06:42:55,668 [wrapper] ==== wrapper stdout END ====
[2026-01-27 07:42:55] 2026-01-27 06:42:55,671 [wrapper] ==== wrapper stderr END ====
[2026-01-27 07:42:55]  *** Error codes and diagnostics ***
[2026-01-27 07:42:55]     "exeErrorCode": 0,
[2026-01-27 07:42:55]     "exeErrorDiag": "",
[2026-01-27 07:42:55]     "pilotErrorCode": 0,
[2026-01-27 07:42:55]     "pilotErrorDiag": "",
[2026-01-27 07:42:55]  *** Listing of results directory ***
[2026-01-27 07:42:55] total 462124
[2026-01-27 07:42:55] -rwx------ 1 boinc boinc     36322 Jan 25 23:58 runpilot2-wrapper.sh
[2026-01-27 07:42:55] -rw-r--r-- 1 boinc boinc      5111 Jan 25 23:58 queuedata.json
[2026-01-27 07:42:55] -rw-r--r-- 1 boinc boinc    584422 Jan 26 00:00 pilot3.tar.gz
[2026-01-27 07:42:55] -rw-r--r-- 1 boinc boinc       100 Jan 27 05:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 07:42:55] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 05:42 run_atlas
[2026-01-27 07:42:55] -rw-r--r-- 1 boinc boinc       105 Jan 27 05:42 job.xml
[2026-01-27 07:42:55] -rw-r--r-- 2 boinc boinc 271929083 Jan 27 05:42 EVNT.48329652._000003.pool.root.1
[2026-01-27 07:42:55] -rw-r--r-- 2 boinc boinc    597765 Jan 27 05:42 input.tar.gz
[2026-01-27 07:42:55] -rw-r--r-- 2 boinc boinc     15845 Jan 27 05:42 start_atlas.sh
[2026-01-27 07:42:55] drwxrwx--x 2 boinc boinc      4096 Jan 27 05:42 shared
[2026-01-27 07:42:55] -rw-r--r-- 1 boinc boinc         0 Jan 27 05:42 boinc_setup_complete
[2026-01-27 07:42:55] -rw-r--r-- 1 boinc boinc      6371 Jan 27 05:42 init_data.xml
[2026-01-27 07:42:55] -rw-r--r-- 1 boinc boinc         0 Jan 27 05:42 boinc_lockfile
[2026-01-27 07:42:55] -rw-r--r-- 1 boinc boinc      2611 Jan 27 05:42 pandaJob.out
[2026-01-27 07:42:55] -rw------- 1 boinc boinc   1006441 Jan 27 05:42 agis_schedconf.cvmfs.json
[2026-01-27 07:42:55] -rw------- 1 boinc boinc   1516246 Jan 27 05:42 agis_ddmendpoints.agis.ALL.json
[2026-01-27 07:42:55] -rw------- 1 boinc boinc       430 Jan 27 05:42 workernode_map.json
[2026-01-27 07:42:55] drwx------ 5 boinc boinc      4096 Jan 27 05:42 pilot3
[2026-01-27 07:42:55] -rw------- 1 boinc boinc 194715843 Jan 27 07:42 HITS.48329654._000057.pool.root.1
[2026-01-27 07:42:55] -rw-r--r-- 1 boinc boinc       529 Jan 27 07:42 boinc_task_state.xml
[2026-01-27 07:42:55] -rw------- 1 boinc boinc        95 Jan 27 07:42 pilot_heartbeat.json
[2026-01-27 07:42:55] -rw------- 1 boinc boinc      1022 Jan 27 07:42 memory_monitor_summary.json
[2026-01-27 07:42:55] -rw------- 1 boinc boinc    295689 Jan 27 07:42 log.48329654._000057.job.log.tgz.1
[2026-01-27 07:42:55] -rw------- 1 boinc boinc      6316 Jan 27 07:42 heartbeat.json
[2026-01-27 07:42:55] -rw-r--r-- 1 boinc boinc        27 Jan 27 07:42 wrapper_checkpoint.txt
[2026-01-27 07:42:55] -rw-r--r-- 1 boinc boinc      8192 Jan 27 07:42 boinc_mmap_file
[2026-01-27 07:42:55] -rw------- 1 boinc boinc       746 Jan 27 07:42 pilotlog.txt
[2026-01-27 07:42:55] -rw------- 1 boinc boinc   1027632 Jan 27 07:42 log.48329654._000057.job.log.1
[2026-01-27 07:42:55] -rw------- 1 boinc boinc       357 Jan 27 07:42 output.list
[2026-01-27 07:42:55] -rw-r--r-- 1 boinc boinc       620 Jan 27 07:42 runtime_log
[2026-01-27 07:42:55] -rw------- 1 boinc boinc   1341440 Jan 27 07:42 result.tar.gz
[2026-01-27 07:42:55] -rw-r--r-- 1 boinc boinc      8911 Jan 27 07:42 runtime_log.err
[2026-01-27 07:42:55] -rw------- 1 boinc boinc       660 Jan 27 07:42 au2MDmhEO48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmte8KDm97gRsm.diag
[2026-01-27 07:42:55] -rw-r--r-- 1 boinc boinc      6927 Jan 27 07:42 stderr.txt
[2026-01-27 07:42:55] HITS file was successfully produced:
[2026-01-27 07:42:55] -rw------- 1 boinc boinc 194715843 Jan 27 07:42 shared/HITS.pool.root.1
[2026-01-27 07:42:55]  *** Contents of shared directory: ***
[2026-01-27 07:42:55] total 457632
[2026-01-27 07:42:55] -rw-r--r-- 2 boinc boinc 271929083 Jan 27 05:42 ATLAS.root_0
[2026-01-27 07:42:55] -rw-r--r-- 2 boinc boinc    597765 Jan 27 05:42 input.tar.gz
[2026-01-27 07:42:55] -rw-r--r-- 2 boinc boinc     15845 Jan 27 05:42 start_atlas.sh
[2026-01-27 07:42:55] -rw------- 1 boinc boinc 194715843 Jan 27 07:42 HITS.pool.root.1
[2026-01-27 07:42:55] -rw------- 1 boinc boinc   1341440 Jan 27 07:42 result.tar.gz
07:42:57 (796262): run_atlas exited; CPU time 27782.340532
07:42:57 (796262): called boinc_finish(0)

</stderr_txt>
]]>

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