Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:04:41 (2720487): wrapper (7.7.26015): starting
18:04:41 (2720487): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 18:04:41] Arguments: --nthreads 4
[2026-01-27 18:04:41] Threads: 4
[2026-01-27 18:04:41] Checking for CVMFS
[2026-01-27 18:04:41] No cvmfs_config command found, will try listing directly
[2026-01-27 18:04:41] CVMFS is ok
[2026-01-27 18:04:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 18:04:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 18:04:41] Further information can be found at the LHC@home message board.
[2026-01-27 18:04:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 18:04:41] Checking for apptainer binary...
[2026-01-27 18:04:41] which: no apptainer in ((null))
[2026-01-27 18:04:41] apptainer is not installed, using version from CVMFS
[2026-01-27 18:04:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 18:04:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2026-01-27 18:04:42] apptainer works
[2026-01-27 18:04:42] Set ATHENA_PROC_NUMBER=4
[2026-01-27 18:04:42] Set ATHENA_CORE_NUMBER=4
[2026-01-27 18:04:42] Starting ATLAS job with PandaID=6983773292
[2026-01-27 18:04:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 21:05:28]  *** The last 200 lines of the pilot log: ***
[2026-01-27 21:05:28] 2026-01-27 20:04:16,517 | INFO     | intersect: 1121666755.9956217
[2026-01-27 21:05:28] 2026-01-27 20:04:16,517 | INFO     | chi2: 0.010945858162629253
[2026-01-27 21:05:28] 2026-01-27 20:04:16,517 | INFO     | current chi2=0.010945858162629253 (change=99.09378913952136 %)
[2026-01-27 21:05:28] 2026-01-27 20:04:16,517 | INFO     | sum of square deviations: 1418361477.5
[2026-01-27 21:05:28] 2026-01-27 20:04:16,518 | INFO     | sum of deviations: 1331097836.0000002
[2026-01-27 21:05:28] 2026-01-27 20:04:16,518 | INFO     | mean x: 1769539164.5
[2026-01-27 21:05:28] 2026-01-27 20:04:16,519 | INFO     | mean y: 2335780.5301204817
[2026-01-27 21:05:28] 2026-01-27 20:04:16,519 | INFO     | intersect: -1658333794.8554664
[2026-01-27 21:05:28] 2026-01-27 20:04:16,519 | INFO     | chi2: 0.003289841944675923
[2026-01-27 21:05:28] 2026-01-27 20:04:16,519 | INFO     | current chi2=0.003289841944675923 (change=69.94441280165753 %)
[2026-01-27 21:05:28] 2026-01-27 20:04:16,519 | INFO     | sum of square deviations: 1294014960.0
[2026-01-27 21:05:28] 2026-01-27 20:04:16,520 | INFO     | sum of deviations: 1407008249.0
[2026-01-27 21:05:28] 2026-01-27 20:04:16,520 | INFO     | mean x: 1769539317.0
[2026-01-27 21:05:28] 2026-01-27 20:04:16,520 | INFO     | mean y: 2335706.714285714
[2026-01-27 21:05:28] 2026-01-27 20:04:16,520 | INFO     | intersect: -1921719650.3805242
[2026-01-27 21:05:28] 2026-01-27 20:04:16,521 | INFO     | chi2: 0.00033779829809456096
[2026-01-27 21:05:28] 2026-01-27 20:04:16,521 | INFO     | current chi2=0.00033779829809456096 (change=89.73208124356148 %)
[2026-01-27 21:05:28] 2026-01-27 20:04:16,521 | INFO     | sum of square deviations: 1177156955.0
[2026-01-27 21:05:28] 2026-01-27 20:04:16,522 | INFO     | sum of deviations: 1005995652.0000001
[2026-01-27 21:05:28] 2026-01-27 20:04:16,522 | INFO     | mean x: 1769539469.5
[2026-01-27 21:05:28] 2026-01-27 20:04:16,522 | INFO     | mean y: 2336229.8076923075
[2026-01-27 21:05:28] 2026-01-27 20:04:16,522 | INFO     | intersect: -1509908169.5463316
[2026-01-27 21:05:28] 2026-01-27 20:04:16,523 | INFO     | chi2: 0.0002075359479390991
[2026-01-27 21:05:28] 2026-01-27 20:04:16,523 | INFO     | current chi2=0.0002075359479390991 (change=38.56216887125852 %)
[2026-01-27 21:05:28] 2026-01-27 20:04:16,523 | INFO     | sum of square deviations: 1067554900.0
[2026-01-27 21:05:28] 2026-01-27 20:04:16,524 | INFO     | sum of deviations: 858732562.9999998
[2026-01-27 21:05:28] 2026-01-27 20:04:16,524 | INFO     | mean x: 1769539622.0
[2026-01-27 21:05:28] 2026-01-27 20:04:16,524 | INFO     | mean y: 2336432.6026490065
[2026-01-27 21:05:28] 2026-01-27 20:04:16,524 | INFO     | intersect: -1421066986.6782804
[2026-01-27 21:05:28] 2026-01-27 20:04:16,524 | INFO     | chi2: 0.00017947129818988208
[2026-01-27 21:05:28] 2026-01-27 20:04:16,524 | INFO     | current chi2=0.00017947129818988208 (change=13.522789679527003 %)
[2026-01-27 21:05:28] 2026-01-27 20:04:16,524 | INFO     | left removable region: 50
[2026-01-27 21:05:28] 2026-01-27 20:04:16,525 | INFO     | sum of square deviations: 535786790.0
[2026-01-27 21:05:28] 2026-01-27 20:04:16,525 | INFO     | sum of deviations: 485521966.5
[2026-01-27 21:05:28] 2026-01-27 20:04:16,525 | INFO     | mean x: 1769540201.5
[2026-01-27 21:05:28] 2026-01-27 20:04:16,525 | INFO     | mean y: 2337120.525
[2026-01-27 21:05:28] 2026-01-27 20:04:16,526 | INFO     | intersect: -1601193713.882258
[2026-01-27 21:05:28] 2026-01-27 20:04:16,526 | INFO     | chi2: 0.00016394682551681752
[2026-01-27 21:05:28] 2026-01-27 20:04:16,526 | INFO     | current memory leak: 0.91 B/s (using 120 data points, chi2=0.00)
[2026-01-27 21:05:28] 2026-01-27 20:04:16,526 | INFO     | could have reported an average CPU frequency of 2657 MHz (9 samples)
[2026-01-27 21:05:28] 2026-01-27 20:04:16,527 | INFO     | ..............................
[2026-01-27 21:05:28] 2026-01-27 20:04:16,527 | INFO     | . Timing measurements:
[2026-01-27 21:05:28] 2026-01-27 20:04:16,527 | INFO     | . get job = 0 s
[2026-01-27 21:05:28] 2026-01-27 20:04:16,527 | INFO     | . initial setup = 5 s
[2026-01-27 21:05:28] 2026-01-27 20:04:16,527 | INFO     | . payload setup = 6 s
[2026-01-27 21:05:28] 2026-01-27 20:04:16,527 | INFO     | . stage-in = 0 s
[2026-01-27 21:05:28] 2026-01-27 20:04:16,527 | INFO     | . payload execution = 10733 s
[2026-01-27 21:05:28] 2026-01-27 20:04:16,527 | INFO     | . stage-out = 0 s
[2026-01-27 21:05:28] 2026-01-27 20:04:16,527 | INFO     | . log creation = 0 s
[2026-01-27 21:05:28] 2026-01-27 20:04:16,527 | INFO     | ..............................
[2026-01-27 21:05:28] 2026-01-27 20:04:16,625 | INFO     | 
[2026-01-27 21:05:28] 2026-01-27 20:04:16,625 | INFO     | job summary report
[2026-01-27 21:05:28] 2026-01-27 20:04:16,625 | INFO     | --------------------------------------------------
[2026-01-27 21:05:28] 2026-01-27 20:04:16,625 | INFO     | PanDA job id: 6983773292
[2026-01-27 21:05:28] 2026-01-27 20:04:16,625 | INFO     | task id: 48317872
[2026-01-27 21:05:28] 2026-01-27 20:04:16,625 | INFO     | errors: (none)
[2026-01-27 21:05:28] 2026-01-27 20:04:16,626 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 21:05:28] 2026-01-27 20:04:16,626 | INFO     | pilot state: finished 
[2026-01-27 21:05:28] 2026-01-27 20:04:16,626 | INFO     | transexitcode: 0
[2026-01-27 21:05:28] 2026-01-27 20:04:16,626 | INFO     | exeerrorcode: 0
[2026-01-27 21:05:28] 2026-01-27 20:04:16,626 | INFO     | exeerrordiag: 
[2026-01-27 21:05:28] 2026-01-27 20:04:16,626 | INFO     | exitcode: 0
[2026-01-27 21:05:28] 2026-01-27 20:04:16,626 | INFO     | exitmsg: OK
[2026-01-27 21:05:28] 2026-01-27 20:04:16,626 | INFO     | cpuconsumptiontime: 41372 s
[2026-01-27 21:05:28] 2026-01-27 20:04:16,626 | INFO     | nevents: 400
[2026-01-27 21:05:28] 2026-01-27 20:04:16,626 | INFO     | neventsw: 0
[2026-01-27 21:05:28] 2026-01-27 20:04:16,626 | INFO     | pid: 2729810
[2026-01-27 21:05:28] 2026-01-27 20:04:16,626 | INFO     | pgrp: 2729810
[2026-01-27 21:05:28] 2026-01-27 20:04:16,626 | INFO     | corecount: 4
[2026-01-27 21:05:28] 2026-01-27 20:04:16,626 | INFO     | event service: False
[2026-01-27 21:05:28] 2026-01-27 20:04:16,627 | INFO     | sizes: {0: 2283140, 1: 2284269, 12: 2284269, 10743: 2312978, 10744: 2322054, 10746: 2322256}
[2026-01-27 21:05:28] 2026-01-27 20:04:16,627 | INFO     | --------------------------------------------------
[2026-01-27 21:05:28] 2026-01-27 20:04:16,627 | INFO     | 
[2026-01-27 21:05:28] 2026-01-27 20:04:16,627 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2026-01-27 21:05:28] 2026-01-27 20:04:16,649 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 21:05:28] 2026-01-27 20:04:16,649 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 21:05:28] 2026-01-27 20:04:16,649 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 21:05:28] 2026-01-27 20:04:16,649 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 21:05:28] 2026-01-27 20:04:16,649 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 21:05:28] 2026-01-27 20:04:16,649 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 21:05:28] 2026-01-27 20:04:16,650 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 21:05:28] 2026-01-27 20:04:16,650 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 21:05:28] 2026-01-27 20:04:16,650 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 21:05:28] 2026-01-27 20:04:16,650 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 21:05:28] 2026-01-27 20:04:16,650 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 21:05:28] 2026-01-27 20:04:16,650 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 21:05:28] 2026-01-27 20:04:16,650 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 21:05:28] 2026-01-27 20:04:16,650 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 21:05:28] 2026-01-27 20:04:16,650 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 21:05:28] 2026-01-27 20:04:16,650 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 21:05:28] 2026-01-27 20:04:16,650 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 21:05:28] 2026-01-27 20:04:16,650 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 21:05:28] 2026-01-27 20:04:16,651 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 21:05:28] 2026-01-27 20:04:16,651 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 21:05:28] 2026-01-27 20:04:16,651 | INFO     | job 6983773292 has completed (purged errors)
[2026-01-27 21:05:28] 2026-01-27 20:04:16,651 | INFO     | overall cleanup function is called
[2026-01-27 21:05:28] 2026-01-27 20:04:17,658 | INFO     | --- collectZombieJob: --- 10, [2729810]
[2026-01-27 21:05:28] 2026-01-27 20:04:17,659 | INFO     | zombie collector waiting for pid 2729810
[2026-01-27 21:05:28] 2026-01-27 20:04:17,659 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 21:05:28] 2026-01-27 20:04:17,659 | INFO     | collected zombie processes
[2026-01-27 21:05:28] 2026-01-27 20:04:17,659 | INFO     | will attempt to kill all subprocesses of pid=2729810
[2026-01-27 21:05:28] 2026-01-27 20:04:18,072 | INFO     | process IDs to be killed: [2729810] (in reverse order)
[2026-01-27 21:05:28] 2026-01-27 20:04:18,186 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 21:05:28] 2026-01-27 20:04:18,186 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 21:05:28] 2026-01-27 20:04:18,200 | INFO     | did not find any defunct processes belonging to 2729810
[2026-01-27 21:05:28] 2026-01-27 20:04:18,213 | INFO     | did not find any defunct processes belonging to 2729810
[2026-01-27 21:05:28] 2026-01-27 20:04:18,213 | INFO     | ready for new job
[2026-01-27 21:05:28] 2026-01-27 20:04:18,214 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 21:05:28] 2026-01-27 20:04:18,216 | INFO     | **************************************
[2026-01-27 21:05:28] 2026-01-27 20:04:18,216 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 21:05:28] 2026-01-27 20:04:18,216 | INFO     | **************************************
[2026-01-27 21:05:28] 2026-01-27 20:04:18,216 | INFO     | 
[2026-01-27 21:05:28] 2026-01-27 20:04:18,220 | INFO     | architecture information:
[2026-01-27 21:05:28] 2026-01-27 20:04:18,221 | INFO     | executing command: cat /etc/os-release
[2026-01-27 21:05:28] 2026-01-27 20:04:18,240 | INFO     | cat /etc/os-release:
[2026-01-27 21:05:28] NAME="CentOS Linux"
[2026-01-27 21:05:28] VERSION="7 (Core)"
[2026-01-27 21:05:28] ID="centos"
[2026-01-27 21:05:28] ID_LIKE="rhel fedora"
[2026-01-27 21:05:28] VERSION_ID="7"
[2026-01-27 21:05:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 21:05:28] ANSI_COLOR="0;31"
[2026-01-27 21:05:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 21:05:28] HOME_URL="https://www.centos.org/"
[2026-01-27 21:05:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 21:05:28] 
[2026-01-27 21:05:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 21:05:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 21:05:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 21:05:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 21:05:28] 
[2026-01-27 21:05:28] 2026-01-27 20:04:18,240 | INFO     | **************************************
[2026-01-27 21:05:28] 2026-01-27 20:04:18,743 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2026-01-27 21:05:28] 2026-01-27 20:04:18,764 | INFO     | sufficient remaining disk space (673399701504 B)
[2026-01-27 21:05:28] 2026-01-27 20:04:18,765 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 21:05:28] 2026-01-27 20:04:18,765 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 21:05:28] 2026-01-27 20:04:18,765 | INFO     | update_server=False
[2026-01-27 21:05:28] 2026-01-27 20:04:18,765 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 21:05:28] 2026-01-27 20:04:18,766 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 21:05:28] 2026-01-27 20:04:18,771 | INFO     | all data control threads have been joined
[2026-01-27 21:05:28] 2026-01-27 20:04:18,986 | INFO     | all payload control threads have been joined
[2026-01-27 21:05:28] 2026-01-27 20:04:19,061 | INFO     | job.realtimelogging is not enabled
[2026-01-27 21:05:28] 2026-01-27 20:04:19,190 | INFO     | all job control threads have been joined
[2026-01-27 21:05:28] 2026-01-27 20:04:19,767 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 21:05:28] 2026-01-27 20:04:19,767 | INFO     | [job] retrieve thread has finished
[2026-01-27 21:05:28] 2026-01-27 20:04:19,777 | INFO     | [data] control thread has finished
[2026-01-27 21:05:28] 2026-01-27 20:04:19,992 | INFO     | [payload] control thread has finished
[2026-01-27 21:05:28] 2026-01-27 20:04:20,067 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 21:05:28] 2026-01-27 20:04:20,071 | INFO     | [job] validate thread has finished
[2026-01-27 21:05:28] 2026-01-27 20:04:20,154 | INFO     | [payload] validate_post thread has finished
[2026-01-27 21:05:28] 2026-01-27 20:04:20,196 | INFO     | [job] control thread has finished
[2026-01-27 21:05:28] 2026-01-27 20:04:20,199 | WARNING  | process 2729810 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 21:05:28] 2026-01-27 20:04:20,277 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 21:05:28] 2026-01-27 20:04:20,288 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 21:05:28] 2026-01-27 20:04:20,519 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 21:05:28] 2026-01-27 20:04:20,520 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 21:05:28] 2026-01-27 20:04:20,520 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-27 21:05:28] 2026-01-27 20:04:20,521 | WARNING  | maxPSS not found in memory monitor output
[2026-01-27 21:05:28] 2026-01-27 20:04:20,521 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6983773292/payload.stdout) since it has not been created yet
[2026-01-27 21:05:28] 2026-01-27 20:04:20,521 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2026-01-27 21:05:28] 2026-01-27 20:04:20,540 | INFO     | sufficient remaining disk space (673398652928 B)
[2026-01-27 21:05:28] 2026-01-27 20:04:20,540 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-27 21:05:28] 2026-01-27 20:04:20,540 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6983773292/HITS.48317872._002069.pool.root.1 since it does not exist
[2026-01-27 21:05:28] 2026-01-27 20:04:20,638 | INFO     | [data] copytool_in thread has finished
[2026-01-27 21:05:28] 2026-01-27 20:04:20,771 | INFO     | [data] copytool_out thread has finished
[2026-01-27 21:05:28] 2026-01-27 20:04:20,882 | INFO     | [payload] failed_post thread has finished
[2026-01-27 21:05:28] 2026-01-27 20:04:20,963 | INFO     | number of running child processes to parent process 2729810: 1
[2026-01-27 21:05:28] 2026-01-27 20:04:20,963 | INFO     | maximum number of monitored processes: 6
[2026-01-27 21:05:28] 2026-01-27 20:04:20,963 | INFO     | aborting job monitoring since job object (job id=6983773292) has expired
[2026-01-27 21:05:28] 2026-01-27 20:04:20,963 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 21:05:28] 2026-01-27 20:04:20,963 | INFO     | will abort loop
[2026-01-27 21:05:28] 2026-01-27 20:04:21,343 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 21:05:28] 2026-01-27 20:04:21,638 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 21:05:28] 2026-01-27 20:04:21,969 | INFO     | [job] job monitor thread has finished
[2026-01-27 21:05:28] 2026-01-27 20:04:22,643 | INFO     | [job] queue monitor thread has finished
[2026-01-27 21:05:28] 2026-01-27 20:04:25,348 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 21:05:28] 2026-01-27 20:04:48,993 | INFO     | PID=2724593 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 21:05:28] 2026-01-27 20:04:48,994 | INFO     | .. there are 4 such processes running
[2026-01-27 21:05:28] 2026-01-27 20:04:48,994 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 21:05:28] 2026-01-27 20:04:48,994 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 21:05:28] 2026-01-27 20:04:48,994 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 21:05:28] 2026-01-27 20:04:52,529 [wrapper] supervise_pilot (15 min periods counter: 13)
[2026-01-27 21:05:28] 2026-01-27 20:05:16,191 | INFO     | [monitor] cgroup control has ended
[2026-01-27 21:05:28] 2026-01-27 20:05:17,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22528541648704)>', '<ExcThread(monitor, started 22528095389440)>']
[2026-01-27 21:05:28] 2026-01-27 20:05:18,137 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 21:05:28] 2026-01-27 20:05:18,138 | INFO     | [monitor] control thread has ended
[2026-01-27 21:05:28] 2026-01-27 20:05:22,551 | INFO     | all workflow threads have been joined
[2026-01-27 21:05:28] 2026-01-27 20:05:22,552 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 21:05:28] 2026-01-27 20:05:22,552 | INFO     | traces error code: 0
[2026-01-27 21:05:28] 2026-01-27 20:05:22,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 21:05:28] 2026-01-27 20:05:22,706 [wrapper] ==== pilot stdout END ====
[2026-01-27 21:05:28] 2026-01-27 20:05:22,709 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 21:05:28] 2026-01-27 20:05:22,712 [wrapper] pilotpid: 2724593
[2026-01-27 21:05:28] 2026-01-27 20:05:22,715 [wrapper] Pilot exit status: 0
[2026-01-27 21:05:28] 2026-01-27 20:05:22,726 [wrapper] pandaids: 6983773292
[2026-01-27 21:05:28] 2026-01-27 20:05:22,808 [wrapper] cleanup supervisor_pilot 2827471 2724594
[2026-01-27 21:05:28] 2026-01-27 20:05:22,811 [wrapper] Test setup, not cleaning
[2026-01-27 21:05:28] 2026-01-27 20:05:22,814 [wrapper] apfmon messages muted
[2026-01-27 21:05:28] 2026-01-27 20:05:22,817 [wrapper] ==== wrapper stdout END ====
[2026-01-27 21:05:28] 2026-01-27 20:05:22,820 [wrapper] ==== wrapper stderr END ====
[2026-01-27 21:05:28]  *** Error codes and diagnostics ***
[2026-01-27 21:05:28]     "exeErrorCode": 0,
[2026-01-27 21:05:28]     "exeErrorDiag": "",
[2026-01-27 21:05:28]     "pilotErrorCode": 0,
[2026-01-27 21:05:28]     "pilotErrorDiag": "",
[2026-01-27 21:05:28]  *** Listing of results directory ***
[2026-01-27 21:05:28] total 675184
[2026-01-27 21:05:28] -rwx------ 1 boinc boinc     36322 Jan 26 04:20 runpilot2-wrapper.sh
[2026-01-27 21:05:28] -rw-r--r-- 1 boinc boinc      5111 Jan 26 04:24 queuedata.json
[2026-01-27 21:05:28] -rw-r--r-- 1 boinc boinc    584422 Jan 26 04:24 pilot3.tar.gz
[2026-01-27 21:05:28] -rw-r--r-- 1 boinc boinc       100 Jan 27 17:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 21:05:28] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 17:05 run_atlas
[2026-01-27 21:05:28] -rw-r--r-- 1 boinc boinc       105 Jan 27 17:05 job.xml
[2026-01-27 21:05:28] -rw-r--r-- 1 boinc boinc      6639 Jan 27 18:04 init_data.xml
[2026-01-27 21:05:28] -rw-r--r-- 2 boinc boinc 503247730 Jan 27 18:04 EVNT.48317869._000042.pool.root.1
[2026-01-27 21:05:28] -rw-r--r-- 2 boinc boinc     15845 Jan 27 18:04 start_atlas.sh
[2026-01-27 21:05:28] drwxrwx--x 2 boinc boinc      4096 Jan 27 18:04 shared
[2026-01-27 21:05:28] -rw-r--r-- 2 boinc boinc    597749 Jan 27 18:04 input.tar.gz
[2026-01-27 21:05:28] -rw-r--r-- 1 boinc boinc         0 Jan 27 18:04 boinc_lockfile
[2026-01-27 21:05:28] -rw-r--r-- 1 boinc boinc      2513 Jan 27 18:04 pandaJob.out
[2026-01-27 21:05:28] -rw------- 1 boinc boinc   1005178 Jan 27 18:04 agis_schedconf.cvmfs.json
[2026-01-27 21:05:28] -rw------- 1 boinc boinc   1516246 Jan 27 18:04 agis_ddmendpoints.agis.ALL.json
[2026-01-27 21:05:28] -rw------- 1 boinc boinc       452 Jan 27 18:04 workernode_map.json
[2026-01-27 21:05:28] drwx------ 5 boinc boinc      4096 Jan 27 18:04 pilot3
[2026-01-27 21:05:28] -rw------- 1 boinc boinc 180446239 Jan 27 21:03 HITS.48317872._002069.pool.root.1
[2026-01-27 21:05:28] -rw------- 1 boinc boinc        95 Jan 27 21:03 pilot_heartbeat.json
[2026-01-27 21:05:28] -rw-r--r-- 1 boinc boinc       529 Jan 27 21:04 boinc_task_state.xml
[2026-01-27 21:05:28] -rw------- 1 boinc boinc      1035 Jan 27 21:04 memory_monitor_summary.json
[2026-01-27 21:05:28] -rw------- 1 boinc boinc    347330 Jan 27 21:04 log.48317872._002069.job.log.tgz.1
[2026-01-27 21:05:28] -rw------- 1 boinc boinc      6404 Jan 27 21:04 heartbeat.json
[2026-01-27 21:05:28] -rw-r--r-- 1 boinc boinc        26 Jan 27 21:05 wrapper_checkpoint.txt
[2026-01-27 21:05:28] -rw------- 1 boinc boinc      6442 Jan 27 21:05 pilotlog.txt
[2026-01-27 21:05:28] -rw------- 1 boinc boinc   1526903 Jan 27 21:05 log.48317872._002069.job.log.1
[2026-01-27 21:05:28] -rw------- 1 boinc boinc       357 Jan 27 21:05 output.list
[2026-01-27 21:05:28] -rw-r--r-- 1 boinc boinc       620 Jan 27 21:05 runtime_log
[2026-01-27 21:05:28] -rw------- 1 boinc boinc   1894400 Jan 27 21:05 result.tar.gz
[2026-01-27 21:05:28] -rw-r--r-- 1 boinc boinc      9205 Jan 27 21:05 runtime_log.err
[2026-01-27 21:05:28] -rw------- 1 boinc boinc       666 Jan 27 21:05 qkFMDmqKS48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfT2KDmMLr5Vm.diag
[2026-01-27 21:05:28] -rw-r--r-- 1 boinc boinc      8192 Jan 27 21:05 boinc_mmap_file
[2026-01-27 21:05:28] -rw-r--r-- 1 boinc boinc     21339 Jan 27 21:05 stderr.txt
[2026-01-27 21:05:28] HITS file was successfully produced:
[2026-01-27 21:05:28] -rw------- 1 boinc boinc 180446239 Jan 27 21:03 shared/HITS.pool.root.1
[2026-01-27 21:05:28]  *** Contents of shared directory: ***
[2026-01-27 21:05:28] total 670136
[2026-01-27 21:05:28] -rw-r--r-- 2 boinc boinc 503247730 Jan 27 18:04 ATLAS.root_0
[2026-01-27 21:05:28] -rw-r--r-- 2 boinc boinc     15845 Jan 27 18:04 start_atlas.sh
[2026-01-27 21:05:28] -rw-r--r-- 2 boinc boinc    597749 Jan 27 18:04 input.tar.gz
[2026-01-27 21:05:28] -rw------- 1 boinc boinc 180446239 Jan 27 21:03 HITS.pool.root.1
[2026-01-27 21:05:28] -rw------- 1 boinc boinc   1894400 Jan 27 21:05 result.tar.gz
21:05:29 (2720487): run_atlas exited; CPU time 41887.860891
21:05:29 (2720487): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN