Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:18:51 (1416): wrapper (7.7.26015): starting
09:18:51 (1416): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 09:18:51] Arguments: --nthreads 12
[2026-01-26 09:18:51] Threads: 12
[2026-01-26 09:18:51] Checking for CVMFS
[2026-01-26 09:18:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 09:18:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 09:18:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 09:18:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 09:18:51] 2.11.2.0 10903 94097 98704 155549 0 49 13016152 20275200 1 130560 0 33997071 99.843 7366433 33585 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 09:18:51] CVMFS is ok
[2026-01-26 09:18:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 09:18:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 09:18:51] Further information can be found at the LHC@home message board.
[2026-01-26 09:18:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 09:18:51] Checking for apptainer binary...
[2026-01-26 09:18:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 09:18:51] Running /usr/bin/apptainer --version
[2026-01-26 09:18:51] apptainer version 1.3.2-1.el7
[2026-01-26 09:18:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 09:18:53] c-205-22.aglt2.org
[2026-01-26 09:18:53] apptainer works
[2026-01-26 09:18:53] Set ATHENA_PROC_NUMBER=12
[2026-01-26 09:18:53] Set ATHENA_CORE_NUMBER=12
[2026-01-26 09:18:53] Starting ATLAS job with PandaID=6983771810
[2026-01-26 09:18:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 10:35:27]  *** The last 200 lines of the pilot log: ***
[2026-01-26 10:35:27]  guid=6d8ac4bc-6e2d-43a9-b7b2-de5f965423c1
[2026-01-26 10:35:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 10:35:27]  is_altstaged=None
[2026-01-26 10:35:27]  is_tar=False
[2026-01-26 10:35:27]  lfn=log.48318042._001632.job.log.tgz.1
[2026-01-26 10:35:27]  mtime=0
[2026-01-26 10:35:27]  protocol_id=None
[2026-01-26 10:35:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 10:35:27]  replicas=None
[2026-01-26 10:35:27]  scope=mc23_13p6TeV
[2026-01-26 10:35:27]  status=None
[2026-01-26 10:35:27]  status_code=0
[2026-01-26 10:35:27]  storage_token=
[2026-01-26 10:35:27]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6983771810/log.48318042._001632.job.log.tgz.1
[2026-01-26 10:35:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/0d/log.48318042._001632.job.log.tgz.1
[2026-01-26 10:35:27]  workdir=None
[2026-01-26 10:35:27] ]
[2026-01-26 10:35:27] 2026-01-26 15:34:32,485 | INFO     | transferring file log.48318042._001632.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6983771810/log.48318042._001632.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 10:35:27] 2026-01-26 15:34:32,486 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6983771810/log.48318042._001632.job.log.tgz.1 /tmp/boinchome/slots/0/log.48318042._001632.job
[2026-01-26 10:35:27] 2026-01-26 15:34:32,506 | INFO     | adding to output.list: log.48318042._001632.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/0d/log.48318042._001632.job.log.tg
[2026-01-26 10:35:27] 2026-01-26 15:34:32,507 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 10:35:27] 2026-01-26 15:34:32,508 | INFO     | summary of transferred files:
[2026-01-26 10:35:27] 2026-01-26 15:34:32,508 | INFO     |  -- lfn=log.48318042._001632.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 10:35:27] 2026-01-26 15:34:32,508 | INFO     | stage-out finished correctly
[2026-01-26 10:35:27] 2026-01-26 15:34:33,331 | INFO     | time since job start (4520s) is within the limit (349056.0s)
[2026-01-26 10:35:27] 2026-01-26 15:34:34,514 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 10:35:27] 2026-01-26 15:34:35,189 | WARNING  | process 9750 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 10:35:27] 2026-01-26 15:34:35,189 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983771810/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 10:35:27] 2026-01-26 15:34:35,278 | INFO     | number of running child processes to parent process 9750: 1
[2026-01-26 10:35:27] 2026-01-26 15:34:35,278 | INFO     | maximum number of monitored processes: 6
[2026-01-26 10:35:27] 2026-01-26 15:34:35,337 | INFO     | time since job start (4522s) is within the limit (349056.0s)
[2026-01-26 10:35:27] 2026-01-26 15:34:36,436 | INFO     | job 6983771810 has state=finished
[2026-01-26 10:35:27] 2026-01-26 15:34:36,437 | INFO     | preparing for final server update for job 6983771810 in state='finished'
[2026-01-26 10:35:27] 2026-01-26 15:34:36,437 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6983771810/jobReport.json
[2026-01-26 10:35:27] 2026-01-26 15:34:36,440 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-26 10:35:27] 2026-01-26 15:34:36,440 | INFO     | this job has now completed (state=finished)
[2026-01-26 10:35:27] 2026-01-26 15:34:36,440 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 10:35:27] 2026-01-26 15:34:36,440 | INFO     | log transfer has been attempted: DONE
[2026-01-26 10:35:27] 2026-01-26 15:34:36,441 | INFO     | job 6983771810 has finished - writing final server update
[2026-01-26 10:35:27] 2026-01-26 15:34:36,441 | INFO     | total number of processed events: 400 (read)
[2026-01-26 10:35:27] 2026-01-26 15:34:36,444 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983771810/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 10:35:27] 2026-01-26 15:34:36,444 | INFO     | extracted standard info from prmon json
[2026-01-26 10:35:27] 2026-01-26 15:34:36,445 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 10:35:27] 2026-01-26 15:34:36,445 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 10:35:27] 2026-01-26 15:34:36,445 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 10:35:27] 2026-01-26 15:34:36,445 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 10:35:27] 2026-01-26 15:34:36,447 | INFO     | fitting pss+swap vs Time
[2026-01-26 10:35:27] 2026-01-26 15:34:36,447 | INFO     | sum of square deviations: 93240818.0
[2026-01-26 10:35:27] 2026-01-26 15:34:36,447 | INFO     | sum of deviations: -6926891112.000001
[2026-01-26 10:35:27] 2026-01-26 15:34:36,447 | INFO     | mean x: 1769439495.0
[2026-01-26 10:35:27] 2026-01-26 15:34:36,448 | INFO     | mean y: 2846869.6716417912
[2026-01-26 10:35:27] 2026-01-26 15:34:36,448 | INFO     | intersect: 131455090361.75758
[2026-01-26 10:35:27] 2026-01-26 15:34:36,448 | INFO     | chi2: 0.09390120185351948
[2026-01-26 10:35:27] 2026-01-26 15:34:36,448 | INFO     | current memory leak: -74.29 B/s (using 67 data points, chi2=0.09)
[2026-01-26 10:35:27] 2026-01-26 15:34:36,448 | INFO     | could have reported an average CPU frequency of 1751 MHz (6 samples)
[2026-01-26 10:35:27] 2026-01-26 15:34:36,448 | INFO     | ..............................
[2026-01-26 10:35:27] 2026-01-26 15:34:36,449 | INFO     | . Timing measurements:
[2026-01-26 10:35:27] 2026-01-26 15:34:36,449 | INFO     | . get job = 0 s
[2026-01-26 10:35:27] 2026-01-26 15:34:36,449 | INFO     | . initial setup = 7 s
[2026-01-26 10:35:27] 2026-01-26 15:34:36,449 | INFO     | . payload setup = 7 s
[2026-01-26 10:35:27] 2026-01-26 15:34:36,449 | INFO     | . stage-in = 0 s
[2026-01-26 10:35:27] 2026-01-26 15:34:36,449 | INFO     | . payload execution = 4495 s
[2026-01-26 10:35:27] 2026-01-26 15:34:36,449 | INFO     | . stage-out = 0 s
[2026-01-26 10:35:27] 2026-01-26 15:34:36,449 | INFO     | . log creation = 0 s
[2026-01-26 10:35:27] 2026-01-26 15:34:36,449 | INFO     | ..............................
[2026-01-26 10:35:27] 2026-01-26 15:34:36,527 | INFO     | 
[2026-01-26 10:35:27] 2026-01-26 15:34:36,527 | INFO     | job summary report
[2026-01-26 10:35:27] 2026-01-26 15:34:36,528 | INFO     | --------------------------------------------------
[2026-01-26 10:35:27] 2026-01-26 15:34:36,528 | INFO     | PanDA job id: 6983771810
[2026-01-26 10:35:27] 2026-01-26 15:34:36,528 | INFO     | task id: 48318042
[2026-01-26 10:35:27] 2026-01-26 15:34:36,528 | INFO     | errors: (none)
[2026-01-26 10:35:27] 2026-01-26 15:34:36,528 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 10:35:27] 2026-01-26 15:34:36,528 | INFO     | pilot state: finished 
[2026-01-26 10:35:27] 2026-01-26 15:34:36,529 | INFO     | transexitcode: 0
[2026-01-26 10:35:27] 2026-01-26 15:34:36,529 | INFO     | exeerrorcode: 0
[2026-01-26 10:35:27] 2026-01-26 15:34:36,529 | INFO     | exeerrordiag: 
[2026-01-26 10:35:27] 2026-01-26 15:34:36,529 | INFO     | exitcode: 0
[2026-01-26 10:35:27] 2026-01-26 15:34:36,529 | INFO     | exitmsg: OK
[2026-01-26 10:35:27] 2026-01-26 15:34:36,529 | INFO     | cpuconsumptiontime: 48550 s
[2026-01-26 10:35:27] 2026-01-26 15:34:36,530 | INFO     | nevents: 400
[2026-01-26 10:35:27] 2026-01-26 15:34:36,530 | INFO     | neventsw: 0
[2026-01-26 10:35:27] 2026-01-26 15:34:36,530 | INFO     | pid: 9750
[2026-01-26 10:35:27] 2026-01-26 15:34:36,530 | INFO     | pgrp: 9750
[2026-01-26 10:35:27] 2026-01-26 15:34:36,530 | INFO     | corecount: 12
[2026-01-26 10:35:27] 2026-01-26 15:34:36,530 | INFO     | event service: False
[2026-01-26 10:35:27] 2026-01-26 15:34:36,531 | INFO     | sizes: {0: 2284249, 11: 2284249, 4505: 2310298, 4508: 2319296, 4510: 2319352, 4512: 2319546}
[2026-01-26 10:35:27] 2026-01-26 15:34:36,531 | INFO     | --------------------------------------------------
[2026-01-26 10:35:27] 2026-01-26 15:34:36,531 | INFO     | 
[2026-01-26 10:35:27] 2026-01-26 15:34:36,531 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 10:35:27] 2026-01-26 15:34:36,555 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 10:35:27] 2026-01-26 15:34:36,556 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 10:35:27] 2026-01-26 15:34:36,556 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 10:35:27] 2026-01-26 15:34:36,556 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 10:35:27] 2026-01-26 15:34:36,556 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 10:35:27] 2026-01-26 15:34:36,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 10:35:27] 2026-01-26 15:34:36,556 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 10:35:27] 2026-01-26 15:34:36,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 10:35:27] 2026-01-26 15:34:36,557 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 10:35:27] 2026-01-26 15:34:36,557 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 10:35:27] 2026-01-26 15:34:36,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 10:35:27] 2026-01-26 15:34:36,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 10:35:27] 2026-01-26 15:34:36,557 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 10:35:27] 2026-01-26 15:34:36,557 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 10:35:27] 2026-01-26 15:34:36,558 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 10:35:27] 2026-01-26 15:34:36,558 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 10:35:27] 2026-01-26 15:34:36,558 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 10:35:27] 2026-01-26 15:34:36,558 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 10:35:27] 2026-01-26 15:34:36,558 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 10:35:27] 2026-01-26 15:34:36,558 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 10:35:27] 2026-01-26 15:34:36,558 | INFO     | job 6983771810 has completed (purged errors)
[2026-01-26 10:35:27] 2026-01-26 15:34:36,559 | INFO     | overall cleanup function is called
[2026-01-26 10:35:27] 2026-01-26 15:34:37,566 | INFO     | --- collectZombieJob: --- 10, [9750]
[2026-01-26 10:35:27] 2026-01-26 15:34:37,567 | INFO     | zombie collector waiting for pid 9750
[2026-01-26 10:35:27] 2026-01-26 15:34:37,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 10:35:27] 2026-01-26 15:34:37,567 | INFO     | collected zombie processes
[2026-01-26 10:35:27] 2026-01-26 15:34:37,567 | INFO     | will attempt to kill all subprocesses of pid=9750
[2026-01-26 10:35:27] 2026-01-26 15:34:37,656 | INFO     | process IDs to be killed: [9750] (in reverse order)
[2026-01-26 10:35:27] 2026-01-26 15:34:37,708 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 10:35:27] 2026-01-26 15:34:37,708 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 10:35:27] 2026-01-26 15:34:37,711 | INFO     | did not find any defunct processes belonging to 9750
[2026-01-26 10:35:27] 2026-01-26 15:34:37,714 | INFO     | did not find any defunct processes belonging to 9750
[2026-01-26 10:35:27] 2026-01-26 15:34:37,714 | INFO     | ready for new job
[2026-01-26 10:35:27] 2026-01-26 15:34:37,714 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 10:35:27] 2026-01-26 15:34:37,715 | INFO     | **************************************
[2026-01-26 10:35:27] 2026-01-26 15:34:37,716 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 10:35:27] 2026-01-26 15:34:37,716 | INFO     | **************************************
[2026-01-26 10:35:27] 2026-01-26 15:34:37,716 | INFO     | 
[2026-01-26 10:35:27] 2026-01-26 15:34:37,717 | INFO     | architecture information:
[2026-01-26 10:35:27] 2026-01-26 15:34:37,717 | INFO     | executing command: cat /etc/os-release
[2026-01-26 10:35:27] 2026-01-26 15:34:37,732 | INFO     | cat /etc/os-release:
[2026-01-26 10:35:27] NAME="CentOS Linux"
[2026-01-26 10:35:27] VERSION="7 (Core)"
[2026-01-26 10:35:27] ID="centos"
[2026-01-26 10:35:27] ID_LIKE="rhel fedora"
[2026-01-26 10:35:27] VERSION_ID="7"
[2026-01-26 10:35:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 10:35:27] ANSI_COLOR="0;31"
[2026-01-26 10:35:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 10:35:27] HOME_URL="https://www.centos.org/"
[2026-01-26 10:35:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 10:35:27] 
[2026-01-26 10:35:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 10:35:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 10:35:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 10:35:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 10:35:27] 
[2026-01-26 10:35:27] 2026-01-26 15:34:37,733 | INFO     | **************************************
[2026-01-26 10:35:27] 2026-01-26 15:34:38,236 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 10:35:27] 2026-01-26 15:34:38,252 | INFO     | sufficient remaining disk space (28801236992 B)
[2026-01-26 10:35:27] 2026-01-26 15:34:38,252 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 10:35:27] 2026-01-26 15:34:38,252 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 10:35:27] 2026-01-26 15:34:38,253 | INFO     | update_server=False
[2026-01-26 10:35:27] 2026-01-26 15:34:38,253 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 10:35:27] 2026-01-26 15:34:38,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 10:35:27] 2026-01-26 15:34:38,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 10:35:27] 2026-01-26 15:34:38,786 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 10:35:27] 2026-01-26 15:34:38,787 | INFO     | aborting loop
[2026-01-26 10:35:27] 2026-01-26 15:34:38,910 | INFO     | all data control threads have been joined
[2026-01-26 10:35:27] 2026-01-26 15:34:39,258 | INFO     | [job] retrieve thread has finished
[2026-01-26 10:35:27] 2026-01-26 15:34:39,259 | INFO     | [job] queue monitor thread has finished
[2026-01-26 10:35:27] 2026-01-26 15:34:39,290 | INFO     | [payload] validate_post thread has finished
[2026-01-26 10:35:27] 2026-01-26 15:34:39,323 | INFO     | [job] validate thread has finished
[2026-01-26 10:35:27] 2026-01-26 15:34:39,413 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 10:35:27] 2026-01-26 15:34:39,430 | INFO     | all payload control threads have been joined
[2026-01-26 10:35:27] 2026-01-26 15:34:39,439 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 10:35:27] 2026-01-26 15:34:39,792 | INFO     | [data] copytool_in thread has finished
[2026-01-26 10:35:27] 2026-01-26 15:34:39,792 | INFO     | [job] job monitor thread has finished
[2026-01-26 10:35:27] 2026-01-26 15:34:39,823 | INFO     | all job control threads have been joined
[2026-01-26 10:35:27] 2026-01-26 15:34:39,916 | INFO     | [data] control thread has finished
[2026-01-26 10:35:27] 2026-01-26 15:34:40,063 | INFO     | [payload] failed_post thread has finished
[2026-01-26 10:35:27] 2026-01-26 15:34:40,194 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 10:35:27] 2026-01-26 15:34:40,259 | INFO     | [data] copytool_out thread has finished
[2026-01-26 10:35:27] 2026-01-26 15:34:40,435 | INFO     | [payload] control thread has finished
[2026-01-26 10:35:27] 2026-01-26 15:34:40,597 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 10:35:27] 2026-01-26 15:34:40,826 | INFO     | [job] control thread has finished
[2026-01-26 10:35:27] 2026-01-26 15:34:44,602 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 10:35:27] 2026-01-26 15:34:48,468 | INFO     | job.realtimelogging is not enabled
[2026-01-26 10:35:27] 2026-01-26 15:34:49,473 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 10:35:27] 2026-01-26 15:35:08,548 | INFO     | PID=5371 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-26 10:35:27] 2026-01-26 15:35:08,548 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 10:35:27] 2026-01-26 15:35:08,549 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 10:35:27] 2026-01-26 15:35:08,549 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 10:35:27] 2026-01-26 15:35:20,209 | INFO     | [monitor] cgroup control has ended
[2026-01-26 10:35:27] 2026-01-26 15:35:22,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140314580408128)>', '<ExcThread(monitor, started 140313460979456)>']
[2026-01-26 10:35:27] 2026-01-26 15:35:22,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 10:35:27] 2026-01-26 15:35:22,604 | INFO     | [monitor] control thread has ended
[2026-01-26 10:35:27] 2026-01-26 15:35:27,262 | INFO     | all workflow threads have been joined
[2026-01-26 10:35:27] 2026-01-26 15:35:27,262 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 10:35:27] 2026-01-26 15:35:27,262 | INFO     | traces error code: 0
[2026-01-26 10:35:27] 2026-01-26 15:35:27,263 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 10:35:27] 2026-01-26 15:35:27,356 [wrapper] ==== pilot stdout END ====
[2026-01-26 10:35:27] 2026-01-26 15:35:27,360 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 10:35:27] 2026-01-26 15:35:27,363 [wrapper] pilotpid: 5371
[2026-01-26 10:35:27] 2026-01-26 15:35:27,367 [wrapper] Pilot exit status: 0
[2026-01-26 10:35:27] 2026-01-26 15:35:27,382 [wrapper] pandaids: 6983771810
[2026-01-26 10:35:27] 2026-01-26 15:35:27,426 [wrapper] cleanup supervisor_pilot  2226 5372
[2026-01-26 10:35:27] 2026-01-26 15:35:27,430 [wrapper] Test setup, not cleaning
[2026-01-26 10:35:27] 2026-01-26 15:35:27,434 [wrapper] apfmon messages muted
[2026-01-26 10:35:27] 2026-01-26 15:35:27,438 [wrapper] ==== wrapper stdout END ====
[2026-01-26 10:35:27] 2026-01-26 15:35:27,441 [wrapper] ==== wrapper stderr END ====
[2026-01-26 10:35:27]  *** Error codes and diagnostics ***
[2026-01-26 10:35:27]     "exeErrorCode": 0,
[2026-01-26 10:35:27]     "exeErrorDiag": "",
[2026-01-26 10:35:27]     "pilotErrorCode": 0,
[2026-01-26 10:35:27]     "pilotErrorDiag": "",
[2026-01-26 10:35:27]  *** Listing of results directory ***
[2026-01-26 10:35:27] total 667872
[2026-01-26 10:35:27] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 22:19 pilot3.tar.gz
[2026-01-26 10:35:27] -rwx------ 1 boincer umatlas     36322 Jan 25 22:19 runpilot2-wrapper.sh
[2026-01-26 10:35:27] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 22:21 queuedata.json
[2026-01-26 10:35:27] -rw-r--r-- 1 boincer umatlas       100 Jan 26 09:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 10:35:27] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 09:18 run_atlas
[2026-01-26 10:35:27] -rw-r--r-- 1 boincer umatlas       105 Jan 26 09:18 job.xml
[2026-01-26 10:35:27] -rw-r--r-- 2 boincer umatlas 498949317 Jan 26 09:18 EVNT.48318040._000033.pool.root.1
[2026-01-26 10:35:27] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 09:18 start_atlas.sh
[2026-01-26 10:35:27] drwxrwx--x 2 boincer umatlas      4096 Jan 26 09:18 shared
[2026-01-26 10:35:27] -rw-r--r-- 2 boincer umatlas    597766 Jan 26 09:18 input.tar.gz
[2026-01-26 10:35:27] -rw-r--r-- 1 boincer umatlas         0 Jan 26 09:18 boinc_lockfile
[2026-01-26 10:35:27] -rw-r--r-- 1 boincer umatlas      2532 Jan 26 09:18 pandaJob.out
[2026-01-26 10:35:27] -rw------- 1 boincer umatlas        57 Jan 26 09:18 setup.sh.local
[2026-01-26 10:35:27] -rw------- 1 boincer umatlas   1002189 Jan 26 09:19 agis_schedconf.cvmfs.json
[2026-01-26 10:35:27] -rw------- 1 boincer umatlas   1516246 Jan 26 09:19 agis_ddmendpoints.agis.ALL.json
[2026-01-26 10:35:27] -rw------- 1 boincer umatlas       434 Jan 26 09:19 workernode_map.json
[2026-01-26 10:35:27] drwx------ 5 boincer umatlas      4096 Jan 26 09:19 pilot3
[2026-01-26 10:35:27] -rw-r--r-- 1 boincer umatlas      5953 Jan 26 10:28 init_data.xml
[2026-01-26 10:35:27] -rw------- 1 boincer umatlas 178919294 Jan 26 10:34 HITS.48318042._001632.pool.root.1
[2026-01-26 10:35:27] -rw-r--r-- 1 boincer umatlas       530 Jan 26 10:34 boinc_task_state.xml
[2026-01-26 10:35:27] -rw------- 1 boincer umatlas      1044 Jan 26 10:34 memory_monitor_summary.json
[2026-01-26 10:35:27] -rw------- 1 boincer umatlas    388266 Jan 26 10:34 log.48318042._001632.job.log.tgz.1
[2026-01-26 10:35:27] -rw------- 1 boincer umatlas      6406 Jan 26 10:34 heartbeat.json
[2026-01-26 10:35:27] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 10:35 boinc_mmap_file
[2026-01-26 10:35:27] -rw------- 1 boincer umatlas        95 Jan 26 10:35 pilot_heartbeat.json
[2026-01-26 10:35:27] -rw-r--r-- 1 boincer umatlas        27 Jan 26 10:35 wrapper_checkpoint.txt
[2026-01-26 10:35:27] -rw------- 1 boincer umatlas      4813 Jan 26 10:35 pilotlog.txt
[2026-01-26 10:35:27] -rw------- 1 boincer umatlas    657468 Jan 26 10:35 log.48318042._001632.job.log.1
[2026-01-26 10:35:27] -rw------- 1 boincer umatlas       357 Jan 26 10:35 output.list
[2026-01-26 10:35:27] -rw-r--r-- 1 boincer umatlas       620 Jan 26 10:35 runtime_log
[2026-01-26 10:35:27] -rw------- 1 boincer umatlas   1064960 Jan 26 10:35 result.tar.gz
[2026-01-26 10:35:27] -rw-r--r-- 1 boincer umatlas      9343 Jan 26 10:35 runtime_log.err
[2026-01-26 10:35:27] -rw------- 1 boincer umatlas       659 Jan 26 10:35 g6jMDmtJS48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmX28KDmfEd56m.diag
[2026-01-26 10:35:27] -rw-r--r-- 1 boincer umatlas     21355 Jan 26 10:35 stderr.txt
[2026-01-26 10:35:27] HITS file was successfully produced:
[2026-01-26 10:35:27] -rw------- 1 boincer umatlas 178919294 Jan 26 10:34 shared/HITS.pool.root.1
[2026-01-26 10:35:27]  *** Contents of shared directory: ***
[2026-01-26 10:35:27] total 663632
[2026-01-26 10:35:27] -rw-r--r-- 2 boincer umatlas 498949317 Jan 26 09:18 ATLAS.root_0
[2026-01-26 10:35:27] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 09:18 start_atlas.sh
[2026-01-26 10:35:27] -rw-r--r-- 2 boincer umatlas    597766 Jan 26 09:18 input.tar.gz
[2026-01-26 10:35:27] -rw------- 1 boincer umatlas 178919294 Jan 26 10:34 HITS.pool.root.1
[2026-01-26 10:35:27] -rw------- 1 boincer umatlas   1064960 Jan 26 10:35 result.tar.gz
10:35:29 (1416): run_atlas exited; CPU time 48533.509930
10:35:29 (1416): called boinc_finish(0)

</stderr_txt>
]]>

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