Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:56:10 (1705892): wrapper (7.7.26015): starting
07:56:10 (1705892): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 07:56:10] Arguments: --nthreads 8
[2026-01-26 07:56:10] Threads: 8
[2026-01-26 07:56:10] Checking for CVMFS
[2026-01-26 07:56:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 07:56:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 07:56:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 07:56:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 07:56:11] 2.13.3.0 12357 117871 248308 155547 2 498 28207032 32503808 57854 16776704 0 1596790802 99.600 1626205218 48480 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 07:56:11] CVMFS is ok
[2026-01-26 07:56:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 07:56:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 07:56:11] Further information can be found at the LHC@home message board.
[2026-01-26 07:56:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 07:56:11] Checking for apptainer binary...
[2026-01-26 07:56:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 07:56:11] Running /usr/bin/apptainer --version
[2026-01-26 07:56:11] apptainer version 1.4.5-2.el9
[2026-01-26 07:56:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 07:56:12] c8-7-2.aglt2.org
[2026-01-26 07:56:12] apptainer works
[2026-01-26 07:56:12] Set ATHENA_PROC_NUMBER=8
[2026-01-26 07:56:12] Set ATHENA_CORE_NUMBER=8
[2026-01-26 07:56:12] Starting ATLAS job with PandaID=6983450181
[2026-01-26 07:56:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 09:28:53]  *** The last 200 lines of the pilot log: ***
[2026-01-26 09:28:53]  is_tar=False
[2026-01-26 09:28:53]  lfn=log.48329421._000124.job.log.tgz.1
[2026-01-26 09:28:53]  mtime=0
[2026-01-26 09:28:53]  protocol_id=None
[2026-01-26 09:28:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 09:28:53]  replicas=None
[2026-01-26 09:28:53]  scope=mc23_13p6TeV
[2026-01-26 09:28:53]  status=None
[2026-01-26 09:28:53]  status_code=0
[2026-01-26 09:28:53]  storage_token=
[2026-01-26 09:28:53]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6983450181/log.48329421._000124.job.log.tgz.1
[2026-01-26 09:28:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/85/75/log.48329421._000124.job.log.tgz.1
[2026-01-26 09:28:53]  workdir=None
[2026-01-26 09:28:53] ]
[2026-01-26 09:28:53] 2026-01-26 14:27:03,154 | INFO     | transferring file log.48329421._000124.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6983450181/log.48329421._000124.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 09:28:53] 2026-01-26 14:27:03,154 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6983450181/log.48329421._000124.job.log.tgz.1 /tmp/boinchome/slots/3/log.48329421._000124.job
[2026-01-26 09:28:53] 2026-01-26 14:27:03,175 | INFO     | adding to output.list: log.48329421._000124.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/85/75/log.48329421._000124.job.log.tg
[2026-01-26 09:28:53] 2026-01-26 14:27:03,176 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 09:28:53] 2026-01-26 14:27:03,176 | INFO     | summary of transferred files:
[2026-01-26 09:28:53] 2026-01-26 14:27:03,176 | INFO     |  -- lfn=log.48329421._000124.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 09:28:53] 2026-01-26 14:27:03,176 | INFO     | stage-out finished correctly
[2026-01-26 09:28:53] 2026-01-26 14:27:03,552 | INFO     | time since job start (5369s) is within the limit (349056.0s)
[2026-01-26 09:28:53] 2026-01-26 14:27:04,932 | WARNING  | process 1762741 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 09:28:53] 2026-01-26 14:27:04,933 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6983450181/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 09:28:53] 2026-01-26 14:27:05,183 [wrapper] supervise_pilot (15 min periods counter: 7)
[2026-01-26 09:28:53] 2026-01-26 14:27:05,560 | INFO     | time since job start (5371s) is within the limit (349056.0s)
[2026-01-26 09:28:53] 2026-01-26 14:27:06,479 | INFO     | number of running child processes to parent process 1762741: 1
[2026-01-26 09:28:53] 2026-01-26 14:27:06,522 | INFO     | maximum number of monitored processes: 6
[2026-01-26 09:28:53] 2026-01-26 14:27:06,676 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 09:28:53] 2026-01-26 14:27:08,090 | INFO     | job 6983450181 has state=finished
[2026-01-26 09:28:53] 2026-01-26 14:27:08,090 | INFO     | preparing for final server update for job 6983450181 in state='finished'
[2026-01-26 09:28:53] 2026-01-26 14:27:08,090 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-6983450181/jobReport.json
[2026-01-26 09:28:53] 2026-01-26 14:27:08,092 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-01-26 09:28:53] 2026-01-26 14:27:08,092 | INFO     | this job has now completed (state=finished)
[2026-01-26 09:28:53] 2026-01-26 14:27:08,092 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 09:28:53] 2026-01-26 14:27:08,092 | INFO     | log transfer has been attempted: DONE
[2026-01-26 09:28:53] 2026-01-26 14:27:08,092 | INFO     | job 6983450181 has finished - writing final server update
[2026-01-26 09:28:53] 2026-01-26 14:27:08,093 | INFO     | total number of processed events: 400 (read)
[2026-01-26 09:28:53] 2026-01-26 14:27:08,119 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6983450181/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 09:28:53] 2026-01-26 14:27:08,119 | INFO     | extracted standard info from prmon json
[2026-01-26 09:28:53] 2026-01-26 14:27:08,119 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 09:28:53] 2026-01-26 14:27:08,119 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 09:28:53] 2026-01-26 14:27:08,120 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 09:28:53] 2026-01-26 14:27:08,120 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 09:28:53] 2026-01-26 14:27:08,121 | INFO     | fitting pss+swap vs Time
[2026-01-26 09:28:53] 2026-01-26 14:27:08,121 | INFO     | sum of square deviations: 158729565.94999978
[2026-01-26 09:28:53] 2026-01-26 14:27:08,121 | INFO     | sum of deviations: 1451983090.6
[2026-01-26 09:28:53] 2026-01-26 14:27:08,121 | INFO     | mean x: 1769435030.525
[2026-01-26 09:28:53] 2026-01-26 14:27:08,121 | INFO     | mean y: 2509203.2
[2026-01-26 09:28:53] 2026-01-26 14:27:08,121 | INFO     | intersect: -16183446632.191725
[2026-01-26 09:28:53] 2026-01-26 14:27:08,121 | INFO     | chi2: 0.030798002152744263
[2026-01-26 09:28:53] 2026-01-26 14:27:08,121 | INFO     | current memory leak: 9.15 B/s (using 80 data points, chi2=0.03)
[2026-01-26 09:28:53] 2026-01-26 14:27:08,122 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2026-01-26 09:28:53] 2026-01-26 14:27:08,122 | INFO     | ..............................
[2026-01-26 09:28:53] 2026-01-26 14:27:08,122 | INFO     | . Timing measurements:
[2026-01-26 09:28:53] 2026-01-26 14:27:08,122 | INFO     | . get job = 0 s
[2026-01-26 09:28:53] 2026-01-26 14:27:08,126 | INFO     | . initial setup = 28 s
[2026-01-26 09:28:53] 2026-01-26 14:27:08,126 | INFO     | . payload setup = 32 s
[2026-01-26 09:28:53] 2026-01-26 14:27:08,126 | INFO     | . stage-in = 0 s
[2026-01-26 09:28:53] 2026-01-26 14:27:08,126 | INFO     | . payload execution = 5319 s
[2026-01-26 09:28:53] 2026-01-26 14:27:08,126 | INFO     | . stage-out = 1 s
[2026-01-26 09:28:53] 2026-01-26 14:27:08,126 | INFO     | . log creation = 0 s
[2026-01-26 09:28:53] 2026-01-26 14:27:08,126 | INFO     | ..............................
[2026-01-26 09:28:53] 2026-01-26 14:27:08,316 | INFO     | 
[2026-01-26 09:28:53] 2026-01-26 14:27:08,316 | INFO     | job summary report
[2026-01-26 09:28:53] 2026-01-26 14:27:08,316 | INFO     | --------------------------------------------------
[2026-01-26 09:28:53] 2026-01-26 14:27:08,316 | INFO     | PanDA job id: 6983450181
[2026-01-26 09:28:53] 2026-01-26 14:27:08,316 | INFO     | task id: 48329421
[2026-01-26 09:28:53] 2026-01-26 14:27:08,316 | INFO     | errors: (none)
[2026-01-26 09:28:53] 2026-01-26 14:27:08,316 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 09:28:53] 2026-01-26 14:27:08,316 | INFO     | pilot state: finished 
[2026-01-26 09:28:53] 2026-01-26 14:27:08,316 | INFO     | transexitcode: 0
[2026-01-26 09:28:53] 2026-01-26 14:27:08,316 | INFO     | exeerrorcode: 0
[2026-01-26 09:28:53] 2026-01-26 14:27:08,316 | INFO     | exeerrordiag: 
[2026-01-26 09:28:53] 2026-01-26 14:27:08,316 | INFO     | exitcode: 0
[2026-01-26 09:28:53] 2026-01-26 14:27:08,317 | INFO     | exitmsg: OK
[2026-01-26 09:28:53] 2026-01-26 14:27:08,317 | INFO     | cpuconsumptiontime: 28351 s
[2026-01-26 09:28:53] 2026-01-26 14:27:08,317 | INFO     | nevents: 400
[2026-01-26 09:28:53] 2026-01-26 14:27:08,317 | INFO     | neventsw: 0
[2026-01-26 09:28:53] 2026-01-26 14:27:08,317 | INFO     | pid: 1762741
[2026-01-26 09:28:53] 2026-01-26 14:27:08,317 | INFO     | pgrp: 1762741
[2026-01-26 09:28:53] 2026-01-26 14:27:08,317 | INFO     | corecount: 8
[2026-01-26 09:28:53] 2026-01-26 14:27:08,317 | INFO     | event service: False
[2026-01-26 09:28:53] 2026-01-26 14:27:08,317 | INFO     | sizes: {0: 2283869, 1: 2284386, 12: 2284386, 5356: 2310749, 5357: 2319747, 5361: 2319803, 5362: 2320125}
[2026-01-26 09:28:53] 2026-01-26 14:27:08,317 | INFO     | --------------------------------------------------
[2026-01-26 09:28:53] 2026-01-26 14:27:08,317 | INFO     | 
[2026-01-26 09:28:53] 2026-01-26 14:27:08,317 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-26 09:28:53] 2026-01-26 14:27:08,359 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 09:28:53] 2026-01-26 14:27:08,360 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 09:28:53] 2026-01-26 14:27:08,360 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 09:28:53] 2026-01-26 14:27:08,360 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 09:28:53] 2026-01-26 14:27:08,360 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 09:28:53] 2026-01-26 14:27:08,360 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 09:28:53] 2026-01-26 14:27:08,360 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 09:28:53] 2026-01-26 14:27:08,360 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 09:28:53] 2026-01-26 14:27:08,360 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 09:28:53] 2026-01-26 14:27:08,360 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 09:28:53] 2026-01-26 14:27:08,360 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 09:28:53] 2026-01-26 14:27:08,360 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 09:28:53] 2026-01-26 14:27:08,360 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 09:28:53] 2026-01-26 14:27:08,360 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 09:28:53] 2026-01-26 14:27:08,360 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 09:28:53] 2026-01-26 14:27:08,360 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 09:28:53] 2026-01-26 14:27:08,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 09:28:53] 2026-01-26 14:27:08,360 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 09:28:53] 2026-01-26 14:27:08,360 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 09:28:53] 2026-01-26 14:27:08,360 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 09:28:53] 2026-01-26 14:27:08,360 | INFO     | job 6983450181 has completed (purged errors)
[2026-01-26 09:28:53] 2026-01-26 14:27:08,361 | INFO     | overall cleanup function is called
[2026-01-26 09:28:53] 2026-01-26 14:27:08,870 | INFO     | PID=1726806 has CPU usage=16.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-26 09:28:53] 2026-01-26 14:27:08,870 | INFO     | .. there are 81 such processes running
[2026-01-26 09:28:53] 2026-01-26 14:27:09,371 | INFO     | --- collectZombieJob: --- 10, [1762741]
[2026-01-26 09:28:53] 2026-01-26 14:27:09,371 | INFO     | zombie collector waiting for pid 1762741
[2026-01-26 09:28:53] 2026-01-26 14:27:09,371 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 09:28:53] 2026-01-26 14:27:09,371 | INFO     | collected zombie processes
[2026-01-26 09:28:53] 2026-01-26 14:27:09,371 | INFO     | will attempt to kill all subprocesses of pid=1762741
[2026-01-26 09:28:53] 2026-01-26 14:27:10,485 | INFO     | process IDs to be killed: [1762741] (in reverse order)
[2026-01-26 09:28:53] 2026-01-26 14:27:10,929 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 09:28:53] 2026-01-26 14:27:10,929 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 09:28:53] 2026-01-26 14:27:10,965 | INFO     | did not find any defunct processes belonging to 1762741
[2026-01-26 09:28:53] 2026-01-26 14:27:11,018 | INFO     | did not find any defunct processes belonging to 1762741
[2026-01-26 09:28:53] 2026-01-26 14:27:11,018 | INFO     | ready for new job
[2026-01-26 09:28:53] 2026-01-26 14:27:11,018 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 09:28:53] 2026-01-26 14:27:11,024 | INFO     | **************************************
[2026-01-26 09:28:53] 2026-01-26 14:27:11,024 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 09:28:53] 2026-01-26 14:27:11,024 | INFO     | **************************************
[2026-01-26 09:28:53] 2026-01-26 14:27:11,024 | INFO     | 
[2026-01-26 09:28:53] 2026-01-26 14:27:11,033 | INFO     | architecture information:
[2026-01-26 09:28:53] 2026-01-26 14:27:11,045 | INFO     | executing command: cat /etc/os-release
[2026-01-26 09:28:53] 2026-01-26 14:27:11,118 | INFO     | cat /etc/os-release:
[2026-01-26 09:28:53] NAME="CentOS Linux"
[2026-01-26 09:28:53] VERSION="7 (Core)"
[2026-01-26 09:28:53] ID="centos"
[2026-01-26 09:28:53] ID_LIKE="rhel fedora"
[2026-01-26 09:28:53] VERSION_ID="7"
[2026-01-26 09:28:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 09:28:53] ANSI_COLOR="0;31"
[2026-01-26 09:28:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 09:28:53] HOME_URL="https://www.centos.org/"
[2026-01-26 09:28:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 09:28:53] 
[2026-01-26 09:28:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 09:28:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 09:28:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 09:28:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 09:28:53] 
[2026-01-26 09:28:53] 2026-01-26 14:27:11,119 | INFO     | **************************************
[2026-01-26 09:28:53] 2026-01-26 14:27:11,622 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-26 09:28:53] 2026-01-26 14:27:11,649 | INFO     | sufficient remaining disk space (88169512960 B)
[2026-01-26 09:28:53] 2026-01-26 14:27:11,650 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 09:28:53] 2026-01-26 14:27:11,650 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 09:28:53] 2026-01-26 14:27:11,650 | INFO     | update_server=False
[2026-01-26 09:28:53] 2026-01-26 14:27:11,650 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 09:28:53] 2026-01-26 14:27:11,650 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 09:28:53] 2026-01-26 14:27:12,071 | INFO     | all data control threads have been joined
[2026-01-26 09:28:53] 2026-01-26 14:27:12,100 | INFO     | all payload control threads have been joined
[2026-01-26 09:28:53] 2026-01-26 14:27:12,557 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 09:28:53] 2026-01-26 14:27:12,558 | INFO     | aborting loop
[2026-01-26 09:28:53] 2026-01-26 14:27:12,656 | INFO     | [job] retrieve thread has finished
[2026-01-26 09:28:53] 2026-01-26 14:27:12,741 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 09:28:53] 2026-01-26 14:27:13,071 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 09:28:53] 2026-01-26 14:27:13,077 | INFO     | [data] control thread has finished
[2026-01-26 09:28:53] 2026-01-26 14:27:13,106 | INFO     | [payload] control thread has finished
[2026-01-26 09:28:53] 2026-01-26 14:27:13,110 | INFO     | all job control threads have been joined
[2026-01-26 09:28:53] 2026-01-26 14:27:13,166 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 09:28:53] 2026-01-26 14:27:13,299 | INFO     | [job] validate thread has finished
[2026-01-26 09:28:53] 2026-01-26 14:27:13,339 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 09:28:53] 2026-01-26 14:27:13,507 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 09:28:53] 2026-01-26 14:27:13,537 | INFO     | [data] copytool_in thread has finished
[2026-01-26 09:28:53] 2026-01-26 14:27:13,564 | INFO     | [job] job monitor thread has finished
[2026-01-26 09:28:53] 2026-01-26 14:27:13,579 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 09:28:53] 2026-01-26 14:27:13,658 | INFO     | [data] copytool_out thread has finished
[2026-01-26 09:28:53] 2026-01-26 14:27:13,782 | INFO     | [payload] failed_post thread has finished
[2026-01-26 09:28:53] 2026-01-26 14:27:14,022 | INFO     | [payload] validate_post thread has finished
[2026-01-26 09:28:53] 2026-01-26 14:27:14,116 | INFO     | [job] control thread has finished
[2026-01-26 09:28:53] 2026-01-26 14:27:14,345 | INFO     | [job] queue monitor thread has finished
[2026-01-26 09:28:53] 2026-01-26 14:27:17,079 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 09:28:53] 2026-01-26 14:27:43,195 | INFO     | [monitor] cgroup control has ended
[2026-01-26 09:28:53] 2026-01-26 14:27:43,457 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140637549745984)>', '<ExcThread(monitor, started 140637202532096)>']
[2026-01-26 09:28:53] 2026-01-26 14:27:43,702 | INFO     | PID=1726806 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 09:28:53] 2026-01-26 14:27:43,702 | INFO     | .. there are 81 such processes running
[2026-01-26 09:28:53] 2026-01-26 14:27:43,711 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 09:28:53] 2026-01-26 14:27:43,711 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 09:28:53] 2026-01-26 14:27:43,711 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 09:28:53] 2026-01-26 14:27:43,711 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 09:28:53] 2026-01-26 14:27:43,711 | INFO     | [monitor] control thread has ended
[2026-01-26 09:28:53] 2026-01-26 14:27:48,483 | INFO     | all workflow threads have been joined
[2026-01-26 09:28:53] 2026-01-26 14:27:48,483 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 09:28:53] 2026-01-26 14:27:48,483 | INFO     | traces error code: 0
[2026-01-26 09:28:53] 2026-01-26 14:27:48,483 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 09:28:53] 2026-01-26 14:27:48,743 [wrapper] ==== pilot stdout END ====
[2026-01-26 09:28:53] 2026-01-26 14:27:48,750 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 09:28:53] 2026-01-26 14:27:48,786 [wrapper] pilotpid: 1726806
[2026-01-26 09:28:53] 2026-01-26 14:27:48,810 [wrapper] Pilot exit status: 0
[2026-01-26 09:28:53] 2026-01-26 14:27:48,822 [wrapper] pandaids: 6983450181
[2026-01-26 09:28:53] 2026-01-26 14:27:48,968 [wrapper] cleanup supervisor_pilot 3408912 1726807
[2026-01-26 09:28:53] 2026-01-26 14:27:48,971 [wrapper] Test setup, not cleaning
[2026-01-26 09:28:53] 2026-01-26 14:27:48,993 [wrapper] apfmon messages muted
[2026-01-26 09:28:53] 2026-01-26 14:27:48,997 [wrapper] ==== wrapper stdout END ====
[2026-01-26 09:28:53] 2026-01-26 14:27:49,007 [wrapper] ==== wrapper stderr END ====
[2026-01-26 09:28:53]  *** Error codes and diagnostics ***
[2026-01-26 09:28:53]     "exeErrorCode": 0,
[2026-01-26 09:28:53]     "exeErrorDiag": "",
[2026-01-26 09:28:53]     "pilotErrorCode": 0,
[2026-01-26 09:28:53]     "pilotErrorDiag": "",
[2026-01-26 09:28:53]  *** Listing of results directory ***
[2026-01-26 09:28:53] total 455436
[2026-01-26 09:28:53] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 15:48 pilot3.tar.gz
[2026-01-26 09:28:53] -rwx------. 1 boincer umatlas     36322 Jan 25 15:49 runpilot2-wrapper.sh
[2026-01-26 09:28:53] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 15:51 queuedata.json
[2026-01-26 09:28:53] -rw-r--r--. 1 boincer umatlas       100 Jan 26 07:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 09:28:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 07:56 run_atlas
[2026-01-26 09:28:53] -rw-r--r--. 1 boincer umatlas       105 Jan 26 07:56 job.xml
[2026-01-26 09:28:53] -rw-r--r--. 2 boincer umatlas 269153129 Jan 26 07:56 EVNT.48329419._000005.pool.root.1
[2026-01-26 09:28:53] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 07:56 start_atlas.sh
[2026-01-26 09:28:53] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 07:56 shared
[2026-01-26 09:28:53] -rw-r--r--. 2 boincer umatlas    597772 Jan 26 07:56 input.tar.gz
[2026-01-26 09:28:53] -rw-r--r--. 1 boincer umatlas         0 Jan 26 07:56 boinc_lockfile
[2026-01-26 09:28:53] -rw-r--r--. 1 boincer umatlas      2608 Jan 26 07:56 pandaJob.out
[2026-01-26 09:28:53] -rw-------. 1 boincer umatlas        57 Jan 26 07:56 setup.sh.local
[2026-01-26 09:28:53] -rw-------. 1 boincer umatlas   1002189 Jan 26 07:57 agis_schedconf.cvmfs.json
[2026-01-26 09:28:53] -rw-------. 1 boincer umatlas   1516246 Jan 26 07:57 agis_ddmendpoints.agis.ALL.json
[2026-01-26 09:28:53] -rw-------. 1 boincer umatlas       429 Jan 26 07:57 workernode_map.json
[2026-01-26 09:28:53] drwx------. 5 boincer umatlas      4096 Jan 26 07:57 pilot3
[2026-01-26 09:28:53] -rw-------. 1 boincer umatlas 191259783 Jan 26 09:26 HITS.48329421._000124.pool.root.1
[2026-01-26 09:28:53] -rw-r--r--. 1 boincer umatlas       529 Jan 26 09:26 boinc_task_state.xml
[2026-01-26 09:28:53] -rw-------. 1 boincer umatlas      1034 Jan 26 09:26 memory_monitor_summary.json
[2026-01-26 09:28:53] -rw-------. 1 boincer umatlas    343596 Jan 26 09:27 log.48329421._000124.job.log.tgz.1
[2026-01-26 09:28:53] -rw-------. 1 boincer umatlas        95 Jan 26 09:27 pilot_heartbeat.json
[2026-01-26 09:28:53] -rw-------. 1 boincer umatlas      6317 Jan 26 09:27 heartbeat.json
[2026-01-26 09:28:53] -rw-------. 1 boincer umatlas      4820 Jan 26 09:27 pilotlog.txt
[2026-01-26 09:28:53] -rw-------. 1 boincer umatlas    665034 Jan 26 09:27 log.48329421._000124.job.log.1
[2026-01-26 09:28:53] -rw-------. 1 boincer umatlas       357 Jan 26 09:27 output.list
[2026-01-26 09:28:53] -rw-r--r--. 1 boincer umatlas       620 Jan 26 09:27 runtime_log
[2026-01-26 09:28:53] -rw-------. 1 boincer umatlas   1024000 Jan 26 09:27 result.tar.gz
[2026-01-26 09:28:53] -rw-------. 1 boincer umatlas       649 Jan 26 09:27 zSnMDmUEM48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoM8KDmY2lnFo.diag
[2026-01-26 09:28:53] -rw-r--r--. 1 boincer umatlas      9331 Jan 26 09:27 runtime_log.err
[2026-01-26 09:28:53] -rw-r--r--. 1 boincer umatlas      7170 Jan 26 09:28 init_data.xml
[2026-01-26 09:28:53] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 09:28 boinc_mmap_file
[2026-01-26 09:28:53] -rw-r--r--. 1 boincer umatlas        27 Jan 26 09:28 wrapper_checkpoint.txt
[2026-01-26 09:28:53] -rw-r--r--. 1 boincer umatlas     21657 Jan 26 09:28 stderr.txt
[2026-01-26 09:28:53] HITS file was successfully produced:
[2026-01-26 09:28:53] -rw-------. 1 boincer umatlas 191259783 Jan 26 09:26 shared/HITS.pool.root.1
[2026-01-26 09:28:53]  *** Contents of shared directory: ***
[2026-01-26 09:28:53] total 451232
[2026-01-26 09:28:53] -rw-r--r--. 2 boincer umatlas 269153129 Jan 26 07:56 ATLAS.root_0
[2026-01-26 09:28:53] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 07:56 start_atlas.sh
[2026-01-26 09:28:53] -rw-r--r--. 2 boincer umatlas    597772 Jan 26 07:56 input.tar.gz
[2026-01-26 09:28:53] -rw-------. 1 boincer umatlas 191259783 Jan 26 09:26 HITS.pool.root.1
[2026-01-26 09:28:53] -rw-------. 1 boincer umatlas   1024000 Jan 26 09:27 result.tar.gz
09:28:55 (1705892): run_atlas exited; CPU time 28556.686397
09:28:55 (1705892): called boinc_finish(0)

</stderr_txt>
]]>

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