Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:06:17 (4006): wrapper (7.7.26015): starting
08:06:17 (4006): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 08:06:17] Arguments: --nthreads 8
[2026-01-26 08:06:17] Threads: 8
[2026-01-26 08:06:17] Checking for CVMFS
[2026-01-26 08:06:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 08:06:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 08:06:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 08:06:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 08:06:18] 2.11.2.0 28294 205575 139652 155547 0 50 15724106 18432000 1833 130560 0 135984063 99.980 7810974 29677 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 08:06:18] CVMFS is ok
[2026-01-26 08:06:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 08:06:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 08:06:18] Further information can be found at the LHC@home message board.
[2026-01-26 08:06:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 08:06:18] Checking for apptainer binary...
[2026-01-26 08:06:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 08:06:18] Running /usr/bin/apptainer --version
[2026-01-26 08:06:18] apptainer version 1.3.2-1.el7
[2026-01-26 08:06:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 08:06:18] c-206-25.aglt2.org
[2026-01-26 08:06:18] apptainer works
[2026-01-26 08:06:18] Set ATHENA_PROC_NUMBER=8
[2026-01-26 08:06:18] Set ATHENA_CORE_NUMBER=8
[2026-01-26 08:06:18] Starting ATLAS job with PandaID=6983772718
[2026-01-26 08:06:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:12:40 (23608): wrapper (7.7.26015): starting
11:12:40 (23608): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 11:12:40] Arguments: --nthreads 8
[2026-01-26 11:12:40] Threads: 8
[2026-01-26 11:12:40] This job has been restarted, cleaning up previous attempt
[2026-01-26 11:12:40] Checking for CVMFS
[2026-01-26 11:12:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 11:12:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 11:12:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 11:12:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 11:12:40] 2.11.2.0 28294 205761 138600 155551 2 32 15742628 18432000 1 130560 0 136143304 99.980 7816554 29682 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 11:12:40] CVMFS is ok
[2026-01-26 11:12:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 11:12:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 11:12:40] Further information can be found at the LHC@home message board.
[2026-01-26 11:12:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 11:12:40] Checking for apptainer binary...
[2026-01-26 11:12:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 11:12:40] Running /usr/bin/apptainer --version
[2026-01-26 11:12:40] apptainer version 1.3.2-1.el7
[2026-01-26 11:12:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 11:12:42] c-206-25.aglt2.org
[2026-01-26 11:12:42] apptainer works
[2026-01-26 11:12:42] Set ATHENA_PROC_NUMBER=8
[2026-01-26 11:12:42] Set ATHENA_CORE_NUMBER=8
[2026-01-26 11:12:42] Starting ATLAS job with PandaID=6983772718
[2026-01-26 11:12:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 14:35:37]  *** The last 200 lines of the pilot log: ***
[2026-01-26 14:35:37] 2026-01-26 19:35:03,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 14:35:37] 2026-01-26 19:35:03,573 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 14:35:37] 2026-01-26 19:35:03,573 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 14:35:37] 2026-01-26 19:35:03,576 | INFO     | fitting pss+swap vs Time
[2026-01-26 14:35:37] 2026-01-26 19:35:03,576 | INFO     | sum of square deviations: 2443580700.0
[2026-01-26 14:35:37] 2026-01-26 19:35:03,577 | INFO     | sum of deviations: 21487427388.000008
[2026-01-26 14:35:37] 2026-01-26 19:35:03,577 | INFO     | mean x: 1769450035.0
[2026-01-26 14:35:37] 2026-01-26 19:35:03,577 | INFO     | mean y: 2458244.0150753767
[2026-01-26 14:35:37] 2026-01-26 19:35:03,577 | INFO     | intersect: -15557056178.306465
[2026-01-26 14:35:37] 2026-01-26 19:35:03,578 | INFO     | chi2: 2.2244585491384927
[2026-01-26 14:35:37] 2026-01-26 19:35:03,578 | INFO     | sum of square deviations: 2263977332.5
[2026-01-26 14:35:37] 2026-01-26 19:35:03,579 | INFO     | sum of deviations: 34612466341.0
[2026-01-26 14:35:37] 2026-01-26 19:35:03,579 | INFO     | mean x: 1769449882.5
[2026-01-26 14:35:37] 2026-01-26 19:35:03,579 | INFO     | mean y: 2469147.3608247424
[2026-01-26 14:35:37] 2026-01-26 19:35:03,579 | INFO     | intersect: -27049490967.66725
[2026-01-26 14:35:37] 2026-01-26 19:35:03,580 | INFO     | chi2: 1.3512238812001
[2026-01-26 14:35:37] 2026-01-26 19:35:03,580 | INFO     | current chi2=1.3512238812001 (change=39.256054839798495 %)
[2026-01-26 14:35:37] 2026-01-26 19:35:03,580 | INFO     | sum of square deviations: 2093397390.0
[2026-01-26 14:35:37] 2026-01-26 19:35:03,582 | INFO     | sum of deviations: 33583216329.999996
[2026-01-26 14:35:37] 2026-01-26 19:35:03,582 | INFO     | mean x: 1769449730.0
[2026-01-26 14:35:37] 2026-01-26 19:35:03,583 | INFO     | mean y: 2468227.3333333335
[2026-01-26 14:35:37] 2026-01-26 19:35:03,583 | INFO     | intersect: -28383834990.35153
[2026-01-26 14:35:37] 2026-01-26 19:35:03,583 | INFO     | chi2: 1.3515575472778711
[2026-01-26 14:35:37] 2026-01-26 19:35:03,583 | INFO     | current chi2=1.3515575472778711 (change=-0.02469361905258287 %)
[2026-01-26 14:35:37] 2026-01-26 19:35:03,583 | INFO     | right removable region: 188
[2026-01-26 14:35:37] 2026-01-26 19:35:03,584 | INFO     | sum of square deviations: 2263977332.5
[2026-01-26 14:35:37] 2026-01-26 19:35:03,584 | INFO     | sum of deviations: -8347186472.500001
[2026-01-26 14:35:37] 2026-01-26 19:35:03,585 | INFO     | mean x: 1769450187.5
[2026-01-26 14:35:37] 2026-01-26 19:35:03,585 | INFO     | mean y: 2483326.1391752576
[2026-01-26 14:35:37] 2026-01-26 19:35:03,585 | INFO     | intersect: 6526369611.057441
[2026-01-26 14:35:37] 2026-01-26 19:35:03,585 | INFO     | chi2: 0.9157521930610885
[2026-01-26 14:35:37] 2026-01-26 19:35:03,585 | INFO     | current chi2=0.9157521930610885 (change=58.832580026463134 %)
[2026-01-26 14:35:37] 2026-01-26 19:35:03,585 | INFO     | sum of square deviations: 2093397390.0
[2026-01-26 14:35:37] 2026-01-26 19:35:03,586 | INFO     | sum of deviations: -11137193340.0
[2026-01-26 14:35:37] 2026-01-26 19:35:03,586 | INFO     | mean x: 1769450340.0
[2026-01-26 14:35:37] 2026-01-26 19:35:03,587 | INFO     | mean y: 2485783.26984127
[2026-01-26 14:35:37] 2026-01-26 19:35:03,587 | INFO     | intersect: 9416231418.114996
[2026-01-26 14:35:37] 2026-01-26 19:35:03,587 | INFO     | chi2: 0.8958167324505256
[2026-01-26 14:35:37] 2026-01-26 19:35:03,587 | INFO     | current chi2=0.8958167324505256 (change=2.176949262215196 %)
[2026-01-26 14:35:37] 2026-01-26 19:35:03,587 | INFO     | left removable region: 20
[2026-01-26 14:35:37] 2026-01-26 19:35:03,587 | INFO     | sum of square deviations: 1470248962.0
[2026-01-26 14:35:37] 2026-01-26 19:35:03,588 | INFO     | sum of deviations: 1929887286.4999998
[2026-01-26 14:35:37] 2026-01-26 19:35:03,588 | INFO     | mean x: 1769450309.5
[2026-01-26 14:35:37] 2026-01-26 19:35:03,588 | INFO     | mean y: 2497832.494047619
[2026-01-26 14:35:37] 2026-01-26 19:35:03,589 | INFO     | intersect: -2320128977.4254684
[2026-01-26 14:35:37] 2026-01-26 19:35:03,589 | INFO     | chi2: 0.001185230428451671
[2026-01-26 14:35:37] 2026-01-26 19:35:03,589 | INFO     | current memory leak: 1.31 B/s (using 168 data points, chi2=0.00)
[2026-01-26 14:35:37] 2026-01-26 19:35:03,589 | INFO     | could have reported an average CPU frequency of 2444 MHz (10 samples)
[2026-01-26 14:35:37] 2026-01-26 19:35:03,590 | INFO     | ..............................
[2026-01-26 14:35:37] 2026-01-26 19:35:03,590 | INFO     | . Timing measurements:
[2026-01-26 14:35:37] 2026-01-26 19:35:03,590 | INFO     | . get job = 0 s
[2026-01-26 14:35:37] 2026-01-26 19:35:03,590 | INFO     | . initial setup = 2 s
[2026-01-26 14:35:37] 2026-01-26 19:35:03,590 | INFO     | . payload setup = 5 s
[2026-01-26 14:35:37] 2026-01-26 19:35:03,590 | INFO     | . stage-in = 0 s
[2026-01-26 14:35:37] 2026-01-26 19:35:03,590 | INFO     | . payload execution = 12104 s
[2026-01-26 14:35:37] 2026-01-26 19:35:03,590 | INFO     | . stage-out = 2 s
[2026-01-26 14:35:37] 2026-01-26 19:35:03,590 | INFO     | . log creation = 0 s
[2026-01-26 14:35:37] 2026-01-26 19:35:03,590 | INFO     | ..............................
[2026-01-26 14:35:37] 2026-01-26 19:35:03,800 | INFO     | time since job start (12128s) is within the limit (349056.0s)
[2026-01-26 14:35:37] 2026-01-26 19:35:04,130 | INFO     | 
[2026-01-26 14:35:37] 2026-01-26 19:35:04,130 | INFO     | job summary report
[2026-01-26 14:35:37] 2026-01-26 19:35:04,130 | INFO     | --------------------------------------------------
[2026-01-26 14:35:37] 2026-01-26 19:35:04,130 | INFO     | PanDA job id: 6983772718
[2026-01-26 14:35:37] 2026-01-26 19:35:04,131 | INFO     | task id: 48318042
[2026-01-26 14:35:37] 2026-01-26 19:35:04,131 | INFO     | errors: (none)
[2026-01-26 14:35:37] 2026-01-26 19:35:04,131 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 14:35:37] 2026-01-26 19:35:04,131 | INFO     | pilot state: finished 
[2026-01-26 14:35:37] 2026-01-26 19:35:04,131 | INFO     | transexitcode: 0
[2026-01-26 14:35:37] 2026-01-26 19:35:04,131 | INFO     | exeerrorcode: 0
[2026-01-26 14:35:37] 2026-01-26 19:35:04,131 | INFO     | exeerrordiag: 
[2026-01-26 14:35:37] 2026-01-26 19:35:04,132 | INFO     | exitcode: 0
[2026-01-26 14:35:37] 2026-01-26 19:35:04,132 | INFO     | exitmsg: OK
[2026-01-26 14:35:37] 2026-01-26 19:35:04,132 | INFO     | cpuconsumptiontime: 93025 s
[2026-01-26 14:35:37] 2026-01-26 19:35:04,132 | INFO     | nevents: 400
[2026-01-26 14:35:37] 2026-01-26 19:35:04,132 | INFO     | neventsw: 0
[2026-01-26 14:35:37] 2026-01-26 19:35:04,132 | INFO     | pid: 10115
[2026-01-26 14:35:37] 2026-01-26 19:35:04,133 | INFO     | pgrp: 10115
[2026-01-26 14:35:37] 2026-01-26 19:35:04,133 | INFO     | corecount: 8
[2026-01-26 14:35:37] 2026-01-26 19:35:04,133 | INFO     | event service: False
[2026-01-26 14:35:37] 2026-01-26 19:35:04,133 | INFO     | sizes: {0: 2283762, 1: 2284279, 12: 2284279, 12113: 2313855, 12115: 2322909, 12117: 2323047}
[2026-01-26 14:35:37] 2026-01-26 19:35:04,133 | INFO     | --------------------------------------------------
[2026-01-26 14:35:37] 2026-01-26 19:35:04,133 | INFO     | 
[2026-01-26 14:35:37] 2026-01-26 19:35:04,134 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 14:35:37] 2026-01-26 19:35:04,147 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 14:35:37] 2026-01-26 19:35:04,147 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 14:35:37] 2026-01-26 19:35:04,148 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 14:35:37] 2026-01-26 19:35:04,148 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 14:35:37] 2026-01-26 19:35:04,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 14:35:37] 2026-01-26 19:35:04,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 14:35:37] 2026-01-26 19:35:04,148 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 14:35:37] 2026-01-26 19:35:04,148 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 14:35:37] 2026-01-26 19:35:04,148 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 14:35:37] 2026-01-26 19:35:04,148 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 14:35:37] 2026-01-26 19:35:04,148 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 14:35:37] 2026-01-26 19:35:04,149 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 14:35:37] 2026-01-26 19:35:04,149 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 14:35:37] 2026-01-26 19:35:04,149 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 14:35:37] 2026-01-26 19:35:04,149 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 14:35:37] 2026-01-26 19:35:04,149 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 14:35:37] 2026-01-26 19:35:04,149 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 14:35:37] 2026-01-26 19:35:04,149 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 14:35:37] 2026-01-26 19:35:04,149 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 14:35:37] 2026-01-26 19:35:04,149 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 14:35:37] 2026-01-26 19:35:04,150 | INFO     | job 6983772718 has completed (purged errors)
[2026-01-26 14:35:37] 2026-01-26 19:35:04,150 | INFO     | overall cleanup function is called
[2026-01-26 14:35:37] 2026-01-26 19:35:04,972 | WARNING  | process 10115 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 14:35:37] 2026-01-26 19:35:05,053 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 14:35:37] 2026-01-26 19:35:05,153 | INFO     | number of running child processes to parent process 10115: 1
[2026-01-26 14:35:37] 2026-01-26 19:35:05,153 | INFO     | maximum number of monitored processes: 6
[2026-01-26 14:35:37] 2026-01-26 19:35:05,153 | INFO     | aborting job monitoring since job object (job id=6983772718) has expired
[2026-01-26 14:35:37] 2026-01-26 19:35:05,157 | INFO     | --- collectZombieJob: --- 10, [10115]
[2026-01-26 14:35:37] 2026-01-26 19:35:05,157 | INFO     | zombie collector waiting for pid 10115
[2026-01-26 14:35:37] 2026-01-26 19:35:05,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 14:35:37] 2026-01-26 19:35:05,157 | INFO     | collected zombie processes
[2026-01-26 14:35:37] 2026-01-26 19:35:05,157 | INFO     | will attempt to kill all subprocesses of pid=10115
[2026-01-26 14:35:37] 2026-01-26 19:35:05,259 | INFO     | process IDs to be killed: [10115] (in reverse order)
[2026-01-26 14:35:37] 2026-01-26 19:35:05,301 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 14:35:37] 2026-01-26 19:35:05,301 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 14:35:37] 2026-01-26 19:35:05,304 | INFO     | did not find any defunct processes belonging to 10115
[2026-01-26 14:35:37] 2026-01-26 19:35:05,306 | INFO     | did not find any defunct processes belonging to 10115
[2026-01-26 14:35:37] 2026-01-26 19:35:05,306 | INFO     | ready for new job
[2026-01-26 14:35:37] 2026-01-26 19:35:05,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 14:35:37] 2026-01-26 19:35:05,308 | INFO     | **************************************
[2026-01-26 14:35:37] 2026-01-26 19:35:05,308 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 14:35:37] 2026-01-26 19:35:05,308 | INFO     | **************************************
[2026-01-26 14:35:37] 2026-01-26 19:35:05,308 | INFO     | 
[2026-01-26 14:35:37] 2026-01-26 19:35:05,309 | INFO     | architecture information:
[2026-01-26 14:35:37] 2026-01-26 19:35:05,310 | INFO     | executing command: cat /etc/os-release
[2026-01-26 14:35:37] 2026-01-26 19:35:05,321 | INFO     | cat /etc/os-release:
[2026-01-26 14:35:37] NAME="CentOS Linux"
[2026-01-26 14:35:37] VERSION="7 (Core)"
[2026-01-26 14:35:37] ID="centos"
[2026-01-26 14:35:37] ID_LIKE="rhel fedora"
[2026-01-26 14:35:37] VERSION_ID="7"
[2026-01-26 14:35:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 14:35:37] ANSI_COLOR="0;31"
[2026-01-26 14:35:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 14:35:37] HOME_URL="https://www.centos.org/"
[2026-01-26 14:35:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 14:35:37] 
[2026-01-26 14:35:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 14:35:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 14:35:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 14:35:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 14:35:37] 
[2026-01-26 14:35:37] 2026-01-26 19:35:05,321 | INFO     | **************************************
[2026-01-26 14:35:37] 2026-01-26 19:35:05,824 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 14:35:37] 2026-01-26 19:35:05,833 | INFO     | sufficient remaining disk space (26734493696 B)
[2026-01-26 14:35:37] 2026-01-26 19:35:05,833 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 14:35:37] 2026-01-26 19:35:05,834 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 14:35:37] 2026-01-26 19:35:05,834 | INFO     | update_server=False
[2026-01-26 14:35:37] 2026-01-26 19:35:05,834 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 14:35:37] 2026-01-26 19:35:05,834 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:35:37] 2026-01-26 19:35:05,834 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 14:35:37] 2026-01-26 19:35:05,834 | INFO     | will abort loop
[2026-01-26 14:35:37] 2026-01-26 19:35:06,428 | INFO     | all payload control threads have been joined
[2026-01-26 14:35:37] 2026-01-26 19:35:06,558 | INFO     | all data control threads have been joined
[2026-01-26 14:35:37] 2026-01-26 19:35:06,839 | INFO     | [job] job monitor thread has finished
[2026-01-26 14:35:37] 2026-01-26 19:35:06,839 | INFO     | [job] retrieve thread has finished
[2026-01-26 14:35:37] 2026-01-26 19:35:06,849 | INFO     | all job control threads have been joined
[2026-01-26 14:35:37] 2026-01-26 19:35:07,006 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 14:35:37] 2026-01-26 19:35:07,308 | INFO     | [data] copytool_in thread has finished
[2026-01-26 14:35:37] 2026-01-26 19:35:07,433 | INFO     | [payload] control thread has finished
[2026-01-26 14:35:37] 2026-01-26 19:35:07,521 | INFO     | [payload] validate_post thread has finished
[2026-01-26 14:35:37] 2026-01-26 19:35:07,563 | INFO     | [data] control thread has finished
[2026-01-26 14:35:37] 2026-01-26 19:35:07,711 | INFO     | [payload] failed_post thread has finished
[2026-01-26 14:35:37] 2026-01-26 19:35:07,840 | INFO     | [data] copytool_out thread has finished
[2026-01-26 14:35:37] 2026-01-26 19:35:07,855 | INFO     | [job] control thread has finished
[2026-01-26 14:35:37] 2026-01-26 19:35:08,231 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 14:35:37] 2026-01-26 19:35:08,279 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 14:35:37] 2026-01-26 19:35:08,279 | INFO     | [job] validate thread has finished
[2026-01-26 14:35:37] 2026-01-26 19:35:08,342 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 14:35:37] 2026-01-26 19:35:08,675 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:35:37] 2026-01-26 19:35:09,680 | INFO     | [job] queue monitor thread has finished
[2026-01-26 14:35:37] 2026-01-26 19:35:12,348 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 14:35:37] 2026-01-26 19:35:14,737 | INFO     | [monitor] cgroup control has ended
[2026-01-26 14:35:37] 2026-01-26 19:35:16,498 | INFO     | job.realtimelogging is not enabled
[2026-01-26 14:35:37] 2026-01-26 19:35:17,502 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 14:35:37] 2026-01-26 19:35:18,216 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139903923566400)>', '<ExcThread(monitor, started 139903073490688)>']
[2026-01-26 14:35:37] 2026-01-26 19:35:23,235 | INFO     | all workflow threads have been joined
[2026-01-26 14:35:37] 2026-01-26 19:35:23,235 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 14:35:37] 2026-01-26 19:35:23,243 | INFO     | traces error code: 0
[2026-01-26 14:35:37] 2026-01-26 19:35:23,244 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 14:35:37] 2026-01-26 19:35:37,023 | INFO     | PID=2287 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-26 14:35:37] 2026-01-26 19:35:37,023 | INFO     | .. there are 3 such processes running
[2026-01-26 14:35:37] 2026-01-26 19:35:37,024 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 14:35:37] 2026-01-26 19:35:37,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 14:35:37] 2026-01-26 19:35:37,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 14:35:37] 2026-01-26 19:35:37,024 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 14:35:37] 2026-01-26 19:35:37,024 | INFO     | [monitor] control thread has ended
[2026-01-26 14:35:37] 2026-01-26 19:35:37,117 [wrapper] ==== pilot stdout END ====
[2026-01-26 14:35:37] 2026-01-26 19:35:37,119 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 14:35:37] 2026-01-26 19:35:37,121 [wrapper] pilotpid: 2287
[2026-01-26 14:35:37] 2026-01-26 19:35:37,123 [wrapper] Pilot exit status: 0
[2026-01-26 14:35:37] 2026-01-26 19:35:37,130 [wrapper] pandaids: 6983772718 6983772718
[2026-01-26 14:35:37] 2026-01-26 19:35:37,158 [wrapper] cleanup supervisor_pilot  1936 2288
[2026-01-26 14:35:37] 2026-01-26 19:35:37,160 [wrapper] Test setup, not cleaning
[2026-01-26 14:35:37] 2026-01-26 19:35:37,162 [wrapper] apfmon messages muted
[2026-01-26 14:35:37] 2026-01-26 19:35:37,164 [wrapper] ==== wrapper stdout END ====
[2026-01-26 14:35:37] 2026-01-26 19:35:37,166 [wrapper] ==== wrapper stderr END ====
[2026-01-26 14:35:37]  *** Error codes and diagnostics ***
[2026-01-26 14:35:37]     "exeErrorCode": 0,
[2026-01-26 14:35:37]     "exeErrorDiag": "",
[2026-01-26 14:35:37]     "pilotErrorCode": 0,
[2026-01-26 14:35:37]     "pilotErrorDiag": "",
[2026-01-26 14:35:37]  *** Listing of results directory ***
[2026-01-26 14:35:37] total 1169676
[2026-01-26 14:35:37] drwx------ 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-01-26 14:35:37] -rwx------ 1 boincer umatlas     36322 Jan 25 22:18 runpilot2-wrapper.sh
[2026-01-26 14:35:37] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 22:19 queuedata.json
[2026-01-26 14:35:37] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 22:19 pilot3.tar.gz
[2026-01-26 14:35:37] -rw-r--r-- 1 boincer umatlas       100 Jan 26 08:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 14:35:37] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 08:06 run_atlas
[2026-01-26 14:35:37] -rw-r--r-- 1 boincer umatlas       105 Jan 26 08:06 job.xml
[2026-01-26 14:35:37] -rw-r--r-- 3 boincer umatlas 501075542 Jan 26 08:06 EVNT.48318040._000037.pool.root.1
[2026-01-26 14:35:37] -rw-r--r-- 3 boincer umatlas 501075542 Jan 26 08:06 ATLAS.root_0
[2026-01-26 14:35:37] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 08:06 start_atlas.sh
[2026-01-26 14:35:37] drwxrwx--x 2 boincer umatlas      4096 Jan 26 08:06 shared
[2026-01-26 14:35:37] -rw-r--r-- 2 boincer umatlas    597767 Jan 26 08:06 input.tar.gz
[2026-01-26 14:35:37] -rw-r--r-- 1 boincer umatlas         0 Jan 26 08:06 boinc_lockfile
[2026-01-26 14:35:37] -rw-r--r-- 1 boincer umatlas      2533 Jan 26 11:12 pandaJob.out
[2026-01-26 14:35:37] -rw------- 1 boincer umatlas        57 Jan 26 11:12 setup.sh.local
[2026-01-26 14:35:37] -rw------- 1 boincer umatlas   1002189 Jan 26 11:12 agis_schedconf.cvmfs.json
[2026-01-26 14:35:37] -rw------- 1 boincer umatlas       445 Jan 26 11:12 workernode_map.json
[2026-01-26 14:35:37] -rw-r--r-- 1 boincer umatlas      5953 Jan 26 14:29 init_data.xml
[2026-01-26 14:35:37] -rw------- 1 boincer umatlas 187353738 Jan 26 14:34 HITS.48318042._001842.pool.root.1
[2026-01-26 14:35:37] -rw-r--r-- 1 boincer umatlas       532 Jan 26 14:34 boinc_task_state.xml
[2026-01-26 14:35:37] -rw------- 1 boincer umatlas      1050 Jan 26 14:34 memory_monitor_summary.json
[2026-01-26 14:35:37] -rw------- 1 boincer umatlas   1516246 Jan 26 14:35 agis_ddmendpoints.agis.ALL.json
[2026-01-26 14:35:37] -rw------- 1 boincer umatlas    450280 Jan 26 14:35 log.48318042._001842.job.log.tgz.1
[2026-01-26 14:35:37] -rw------- 1 boincer umatlas      6424 Jan 26 14:35 heartbeat.json
[2026-01-26 14:35:37] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 14:35 boinc_mmap_file
[2026-01-26 14:35:37] -rw-r--r-- 1 boincer umatlas        29 Jan 26 14:35 wrapper_checkpoint.txt
[2026-01-26 14:35:37] -rw------- 1 boincer umatlas       819 Jan 26 14:35 pilotlog.txt
[2026-01-26 14:35:37] -rw------- 1 boincer umatlas        96 Jan 26 14:35 pilot_heartbeat.json
[2026-01-26 14:35:37] -rw------- 1 boincer umatlas   1703231 Jan 26 14:35 log.48318042._001842.job.log.1
[2026-01-26 14:35:37] -rw------- 1 boincer umatlas       357 Jan 26 14:35 output.list
[2026-01-26 14:35:37] -rw-r--r-- 1 boincer umatlas       620 Jan 26 14:35 runtime_log
[2026-01-26 14:35:37] -rw------- 1 boincer umatlas   2170880 Jan 26 14:35 result.tar.gz
[2026-01-26 14:35:37] -rw------- 1 boincer umatlas       786 Jan 26 14:35 zWaKDmTIS48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTO2KDm2hLXYm.diag
[2026-01-26 14:35:37] -rw-r--r-- 1 boincer umatlas      9427 Jan 26 14:35 runtime_log.err
[2026-01-26 14:35:37] -rw-r--r-- 1 boincer umatlas     23196 Jan 26 14:35 stderr.txt
[2026-01-26 14:35:37] HITS file was successfully produced:
[2026-01-26 14:35:37] -rw------- 1 boincer umatlas 187353738 Jan 26 14:34 shared/HITS.pool.root.1
[2026-01-26 14:35:37]  *** Contents of shared directory: ***
[2026-01-26 14:35:37] total 675024
[2026-01-26 14:35:37] -rw-r--r-- 3 boincer umatlas 501075542 Jan 26 08:06 ATLAS.root_0
[2026-01-26 14:35:37] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 08:06 start_atlas.sh
[2026-01-26 14:35:37] -rw-r--r-- 2 boincer umatlas    597767 Jan 26 08:06 input.tar.gz
[2026-01-26 14:35:37] -rw------- 1 boincer umatlas 187353738 Jan 26 14:34 HITS.pool.root.1
[2026-01-26 14:35:37] -rw------- 1 boincer umatlas   2170880 Jan 26 14:35 result.tar.gz
14:35:39 (23608): run_atlas exited; CPU time 93184.254209
14:35:39 (23608): called boinc_finish(0)

</stderr_txt>
]]>

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