Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:11:48 (18314): wrapper (7.7.26015): starting
07:11:48 (18314): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 07:11:48] Arguments: --nthreads 8
[2026-01-26 07:11:48] Threads: 8
[2026-01-26 07:11:48] Checking for CVMFS
[2026-01-26 07:11:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 07:11:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 07:11:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 07:11:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 07:11:49] 2.11.2.0 14729 205491 144228 155545 0 52 11517334 18432000 1833 130560 0 138674061 99.981 7732487 29072 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 07:11:49] CVMFS is ok
[2026-01-26 07:11:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 07:11:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 07:11:49] Further information can be found at the LHC@home message board.
[2026-01-26 07:11:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 07:11:49] Checking for apptainer binary...
[2026-01-26 07:11:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 07:11:49] Running /usr/bin/apptainer --version
[2026-01-26 07:11:49] apptainer version 1.3.2-1.el7
[2026-01-26 07:11:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 07:11:50] c-206-30.aglt2.org
[2026-01-26 07:11:50] apptainer works
[2026-01-26 07:11:50] Set ATHENA_PROC_NUMBER=8
[2026-01-26 07:11:50] Set ATHENA_CORE_NUMBER=8
[2026-01-26 07:11:50] Starting ATLAS job with PandaID=6984063078
[2026-01-26 07:11:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 10:29:28]  *** The last 200 lines of the pilot log: ***
[2026-01-26 10:29:28] 2026-01-26 15:28:49,992 | INFO     | log transfer has been attempted: DONE
[2026-01-26 10:29:28] 2026-01-26 15:28:49,993 | INFO     | job 6984063078 has finished - writing final server update
[2026-01-26 10:29:28] 2026-01-26 15:28:49,993 | INFO     | total number of processed events: 400 (read)
[2026-01-26 10:29:28] 2026-01-26 15:28:49,995 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6984063078/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 10:29:28] 2026-01-26 15:28:49,996 | INFO     | extracted standard info from prmon json
[2026-01-26 10:29:28] 2026-01-26 15:28:49,996 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 10:29:28] 2026-01-26 15:28:49,996 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 10:29:28] 2026-01-26 15:28:49,996 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 10:29:28] 2026-01-26 15:28:49,996 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 10:29:28] 2026-01-26 15:28:49,999 | INFO     | fitting pss+swap vs Time
[2026-01-26 10:29:28] 2026-01-26 15:28:50,000 | INFO     | sum of square deviations: 2263977332.5
[2026-01-26 10:29:28] 2026-01-26 15:28:50,001 | INFO     | sum of deviations: -1022560019.0000019
[2026-01-26 10:29:28] 2026-01-26 15:28:50,001 | INFO     | mean x: 1769435421.5
[2026-01-26 10:29:28] 2026-01-26 15:28:50,001 | INFO     | mean y: 2477471.9896907215
[2026-01-26 10:29:28] 2026-01-26 15:28:50,001 | INFO     | intersect: 801670066.4801731
[2026-01-26 10:29:28] 2026-01-26 15:28:50,001 | INFO     | chi2: 2.2321313430308063
[2026-01-26 10:29:28] 2026-01-26 15:28:50,001 | INFO     | sum of square deviations: 2093397390.0
[2026-01-26 10:29:28] 2026-01-26 15:28:50,002 | INFO     | sum of deviations: 11703082165.999998
[2026-01-26 10:29:28] 2026-01-26 15:28:50,002 | INFO     | mean x: 1769435269.0
[2026-01-26 10:29:28] 2026-01-26 15:28:50,003 | INFO     | mean y: 2488609.698412698
[2026-01-26 10:29:28] 2026-01-26 15:28:50,003 | INFO     | intersect: -9889491976.23578
[2026-01-26 10:29:28] 2026-01-26 15:28:50,003 | INFO     | chi2: 1.45894338058747
[2026-01-26 10:29:28] 2026-01-26 15:28:50,003 | INFO     | current chi2=1.45894338058747 (change=34.63899939658099 %)
[2026-01-26 10:29:28] 2026-01-26 15:28:50,003 | INFO     | sum of square deviations: 1931608310.0
[2026-01-26 10:29:28] 2026-01-26 15:28:50,004 | INFO     | sum of deviations: 11393267679.999998
[2026-01-26 10:29:28] 2026-01-26 15:28:50,004 | INFO     | mean x: 1769435116.5
[2026-01-26 10:29:28] 2026-01-26 15:28:50,004 | INFO     | mean y: 2488317.6195652173
[2026-01-26 10:29:28] 2026-01-26 15:28:50,005 | INFO     | intersect: -10434227977.453985
[2026-01-26 10:29:28] 2026-01-26 15:28:50,005 | INFO     | chi2: 1.459867524412645
[2026-01-26 10:29:28] 2026-01-26 15:28:50,005 | INFO     | current chi2=1.459867524412645 (change=-0.06334336462068064 %)
[2026-01-26 10:29:28] 2026-01-26 15:28:50,005 | INFO     | right removable region: 183
[2026-01-26 10:29:28] 2026-01-26 15:28:50,005 | INFO     | sum of square deviations: 2093397390.0
[2026-01-26 10:29:28] 2026-01-26 15:28:50,006 | INFO     | sum of deviations: -28296471197.0
[2026-01-26 10:29:28] 2026-01-26 15:28:50,006 | INFO     | mean x: 1769435574.0
[2026-01-26 10:29:28] 2026-01-26 15:28:50,006 | INFO     | mean y: 2501549.529100529
[2026-01-26 10:29:28] 2026-01-26 15:28:50,007 | INFO     | intersect: 23919977989.412388
[2026-01-26 10:29:28] 2026-01-26 15:28:50,007 | INFO     | chi2: 0.8931213529074847
[2026-01-26 10:29:28] 2026-01-26 15:28:50,007 | INFO     | current chi2=0.8931213529074847 (change=59.98795699473503 %)
[2026-01-26 10:29:28] 2026-01-26 15:28:50,007 | INFO     | sum of square deviations: 1931608310.0
[2026-01-26 10:29:28] 2026-01-26 15:28:50,008 | INFO     | sum of deviations: -27713600367.500004
[2026-01-26 10:29:28] 2026-01-26 15:28:50,008 | INFO     | mean x: 1769435726.5
[2026-01-26 10:29:28] 2026-01-26 15:28:50,008 | INFO     | mean y: 2500950.940217391
[2026-01-26 10:29:28] 2026-01-26 15:28:50,008 | INFO     | intersect: 25389342758.53113
[2026-01-26 10:29:28] 2026-01-26 15:28:50,009 | INFO     | chi2: 0.8780695340045117
[2026-01-26 10:29:28] 2026-01-26 15:28:50,009 | INFO     | current chi2=0.8780695340045117 (change=1.6853050096689592 %)
[2026-01-26 10:29:28] 2026-01-26 15:28:50,009 | INFO     | left removable region: 20
[2026-01-26 10:29:28] 2026-01-26 15:28:50,009 | INFO     | sum of square deviations: 1342841922.0
[2026-01-26 10:29:28] 2026-01-26 15:28:50,010 | INFO     | sum of deviations: -3301146027.9999995
[2026-01-26 10:29:28] 2026-01-26 15:28:50,010 | INFO     | mean x: 1769435696.0
[2026-01-26 10:29:28] 2026-01-26 15:28:50,010 | INFO     | mean y: 2500850.944785276
[2026-01-26 10:29:28] 2026-01-26 15:28:50,010 | INFO     | intersect: 4352354339.9929285
[2026-01-26 10:29:28] 2026-01-26 15:28:50,010 | INFO     | chi2: 0.023974497988166497
[2026-01-26 10:29:28] 2026-01-26 15:28:50,011 | INFO     | current memory leak: -2.46 B/s (using 163 data points, chi2=0.02)
[2026-01-26 10:29:28] 2026-01-26 15:28:50,011 | INFO     | could have reported an average CPU frequency of 2477 MHz (10 samples)
[2026-01-26 10:29:28] 2026-01-26 15:28:50,011 | INFO     | ..............................
[2026-01-26 10:29:28] 2026-01-26 15:28:50,011 | INFO     | . Timing measurements:
[2026-01-26 10:29:28] 2026-01-26 15:28:50,011 | INFO     | . get job = 0 s
[2026-01-26 10:29:28] 2026-01-26 15:28:50,011 | INFO     | . initial setup = 5 s
[2026-01-26 10:29:28] 2026-01-26 15:28:50,012 | INFO     | . payload setup = 5 s
[2026-01-26 10:29:28] 2026-01-26 15:28:50,012 | INFO     | . stage-in = 0 s
[2026-01-26 10:29:28] 2026-01-26 15:28:50,012 | INFO     | . payload execution = 11790 s
[2026-01-26 10:29:28] 2026-01-26 15:28:50,012 | INFO     | . stage-out = 2 s
[2026-01-26 10:29:28] 2026-01-26 15:28:50,012 | INFO     | . log creation = 0 s
[2026-01-26 10:29:28] 2026-01-26 15:28:50,012 | INFO     | ..............................
[2026-01-26 10:29:28] 2026-01-26 15:28:50,098 | INFO     | 
[2026-01-26 10:29:28] 2026-01-26 15:28:50,098 | INFO     | job summary report
[2026-01-26 10:29:28] 2026-01-26 15:28:50,099 | INFO     | --------------------------------------------------
[2026-01-26 10:29:28] 2026-01-26 15:28:50,099 | INFO     | PanDA job id: 6984063078
[2026-01-26 10:29:28] 2026-01-26 15:28:50,099 | INFO     | task id: 48317952
[2026-01-26 10:29:28] 2026-01-26 15:28:50,099 | INFO     | errors: (none)
[2026-01-26 10:29:28] 2026-01-26 15:28:50,099 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 10:29:28] 2026-01-26 15:28:50,099 | INFO     | pilot state: finished 
[2026-01-26 10:29:28] 2026-01-26 15:28:50,099 | INFO     | transexitcode: 0
[2026-01-26 10:29:28] 2026-01-26 15:28:50,099 | INFO     | exeerrorcode: 0
[2026-01-26 10:29:28] 2026-01-26 15:28:50,099 | INFO     | exeerrordiag: 
[2026-01-26 10:29:28] 2026-01-26 15:28:50,099 | INFO     | exitcode: 0
[2026-01-26 10:29:28] 2026-01-26 15:28:50,100 | INFO     | exitmsg: OK
[2026-01-26 10:29:28] 2026-01-26 15:28:50,100 | INFO     | cpuconsumptiontime: 89593 s
[2026-01-26 10:29:28] 2026-01-26 15:28:50,100 | INFO     | nevents: 400
[2026-01-26 10:29:28] 2026-01-26 15:28:50,100 | INFO     | neventsw: 0
[2026-01-26 10:29:28] 2026-01-26 15:28:50,100 | INFO     | pid: 26431
[2026-01-26 10:29:28] 2026-01-26 15:28:50,100 | INFO     | pgrp: 26431
[2026-01-26 10:29:28] 2026-01-26 15:28:50,100 | INFO     | corecount: 8
[2026-01-26 10:29:28] 2026-01-26 15:28:50,100 | INFO     | event service: False
[2026-01-26 10:29:28] 2026-01-26 15:28:50,100 | INFO     | sizes: {0: 2283798, 1: 2284259, 11799: 2313746, 11802: 2322744, 11803: 2322800, 11804: 2322994}
[2026-01-26 10:29:28] 2026-01-26 15:28:50,100 | INFO     | --------------------------------------------------
[2026-01-26 10:29:28] 2026-01-26 15:28:50,101 | INFO     | 
[2026-01-26 10:29:28] 2026-01-26 15:28:50,101 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-26 10:29:28] 2026-01-26 15:28:50,118 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 10:29:28] 2026-01-26 15:28:50,119 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 10:29:28] 2026-01-26 15:28:50,119 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 10:29:28] 2026-01-26 15:28:50,119 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 10:29:28] 2026-01-26 15:28:50,119 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 10:29:28] 2026-01-26 15:28:50,120 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 10:29:28] 2026-01-26 15:28:50,120 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 10:29:28] 2026-01-26 15:28:50,120 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 10:29:28] 2026-01-26 15:28:50,120 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 10:29:28] 2026-01-26 15:28:50,120 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 10:29:28] 2026-01-26 15:28:50,121 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 10:29:28] 2026-01-26 15:28:50,121 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 10:29:28] 2026-01-26 15:28:50,121 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 10:29:28] 2026-01-26 15:28:50,121 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 10:29:28] 2026-01-26 15:28:50,121 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 10:29:28] 2026-01-26 15:28:50,121 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 10:29:28] 2026-01-26 15:28:50,122 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 10:29:28] 2026-01-26 15:28:50,122 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 10:29:28] 2026-01-26 15:28:50,122 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 10:29:28] 2026-01-26 15:28:50,122 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 10:29:28] 2026-01-26 15:28:50,122 | INFO     | job 6984063078 has completed (purged errors)
[2026-01-26 10:29:28] 2026-01-26 15:28:50,122 | INFO     | overall cleanup function is called
[2026-01-26 10:29:28] 2026-01-26 15:28:51,127 | INFO     | --- collectZombieJob: --- 10, [26431]
[2026-01-26 10:29:28] 2026-01-26 15:28:51,128 | INFO     | zombie collector waiting for pid 26431
[2026-01-26 10:29:28] 2026-01-26 15:28:51,128 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 10:29:28] 2026-01-26 15:28:51,128 | INFO     | collected zombie processes
[2026-01-26 10:29:28] 2026-01-26 15:28:51,128 | INFO     | will attempt to kill all subprocesses of pid=26431
[2026-01-26 10:29:28] 2026-01-26 15:28:51,288 | INFO     | process IDs to be killed: [26431] (in reverse order)
[2026-01-26 10:29:28] 2026-01-26 15:28:51,344 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 10:29:28] 2026-01-26 15:28:51,345 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 10:29:28] 2026-01-26 15:28:51,349 | INFO     | did not find any defunct processes belonging to 26431
[2026-01-26 10:29:28] 2026-01-26 15:28:51,354 | INFO     | did not find any defunct processes belonging to 26431
[2026-01-26 10:29:28] 2026-01-26 15:28:51,354 | INFO     | ready for new job
[2026-01-26 10:29:28] 2026-01-26 15:28:51,355 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 10:29:28] 2026-01-26 15:28:51,357 | INFO     | **************************************
[2026-01-26 10:29:28] 2026-01-26 15:28:51,357 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 10:29:28] 2026-01-26 15:28:51,357 | INFO     | **************************************
[2026-01-26 10:29:28] 2026-01-26 15:28:51,357 | INFO     | 
[2026-01-26 10:29:28] 2026-01-26 15:28:51,358 | INFO     | architecture information:
[2026-01-26 10:29:28] 2026-01-26 15:28:51,359 | INFO     | executing command: cat /etc/os-release
[2026-01-26 10:29:28] 2026-01-26 15:28:51,373 | INFO     | cat /etc/os-release:
[2026-01-26 10:29:28] NAME="CentOS Linux"
[2026-01-26 10:29:28] VERSION="7 (Core)"
[2026-01-26 10:29:28] ID="centos"
[2026-01-26 10:29:28] ID_LIKE="rhel fedora"
[2026-01-26 10:29:28] VERSION_ID="7"
[2026-01-26 10:29:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 10:29:28] ANSI_COLOR="0;31"
[2026-01-26 10:29:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 10:29:28] HOME_URL="https://www.centos.org/"
[2026-01-26 10:29:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 10:29:28] 
[2026-01-26 10:29:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 10:29:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 10:29:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 10:29:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 10:29:28] 
[2026-01-26 10:29:28] 2026-01-26 15:28:51,373 | INFO     | **************************************
[2026-01-26 10:29:28] 2026-01-26 15:28:51,877 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-26 10:29:28] 2026-01-26 15:28:51,889 | INFO     | sufficient remaining disk space (26288848896 B)
[2026-01-26 10:29:28] 2026-01-26 15:28:51,889 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 10:29:28] 2026-01-26 15:28:51,890 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 10:29:28] 2026-01-26 15:28:51,890 | INFO     | update_server=False
[2026-01-26 10:29:28] 2026-01-26 15:28:51,890 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 10:29:28] 2026-01-26 15:28:51,890 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 10:29:28] 2026-01-26 15:28:52,801 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 10:29:28] 2026-01-26 15:28:52,801 | INFO     | aborting loop
[2026-01-26 10:29:28] 2026-01-26 15:28:52,895 | INFO     | [job] retrieve thread has finished
[2026-01-26 10:29:28] 2026-01-26 15:28:52,896 | INFO     | [job] queue monitor thread has finished
[2026-01-26 10:29:28] 2026-01-26 15:28:52,952 | INFO     | all data control threads have been joined
[2026-01-26 10:29:28] 2026-01-26 15:28:53,071 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 10:29:28] 2026-01-26 15:28:53,086 | INFO     | [job] validate thread has finished
[2026-01-26 10:29:28] 2026-01-26 15:28:53,127 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 10:29:28] 2026-01-26 15:28:53,140 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 10:29:28] 2026-01-26 15:28:53,159 | INFO     | all payload control threads have been joined
[2026-01-26 10:29:28] 2026-01-26 15:28:53,554 | INFO     | all job control threads have been joined
[2026-01-26 10:29:28] 2026-01-26 15:28:53,792 | INFO     | [payload] validate_post thread has finished
[2026-01-26 10:29:28] 2026-01-26 15:28:53,807 | INFO     | [job] job monitor thread has finished
[2026-01-26 10:29:28] 2026-01-26 15:28:53,957 | INFO     | [data] control thread has finished
[2026-01-26 10:29:28] 2026-01-26 15:28:54,165 | INFO     | [payload] control thread has finished
[2026-01-26 10:29:28] 2026-01-26 15:28:54,251 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 10:29:28] 2026-01-26 15:28:54,256 | INFO     | [data] copytool_in thread has finished
[2026-01-26 10:29:28] 2026-01-26 15:28:54,333 | INFO     | [payload] failed_post thread has finished
[2026-01-26 10:29:28] 2026-01-26 15:28:54,561 | INFO     | [job] control thread has finished
[2026-01-26 10:29:28] 2026-01-26 15:28:54,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 10:29:28] 2026-01-26 15:28:55,134 | INFO     | [data] copytool_out thread has finished
[2026-01-26 10:29:28] 2026-01-26 15:28:58,573 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 10:29:28] 2026-01-26 15:29:02,605 | INFO     | job.realtimelogging is not enabled
[2026-01-26 10:29:28] 2026-01-26 15:29:03,611 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 10:29:28] 2026-01-26 15:29:22,356 | INFO     | PID=21986 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 10:29:28] 2026-01-26 15:29:22,356 | INFO     | .. there are 3 such processes running
[2026-01-26 10:29:28] 2026-01-26 15:29:22,362 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 10:29:28] 2026-01-26 15:29:22,362 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 10:29:28] 2026-01-26 15:29:22,363 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 10:29:28] 2026-01-26 15:29:23,512 | INFO     | [monitor] cgroup control has ended
[2026-01-26 10:29:28] 2026-01-26 15:29:23,573 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139672424605504)>', '<ExcThread(monitor, started 139671849916160)>']
[2026-01-26 10:29:28] 2026-01-26 15:29:24,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 10:29:28] 2026-01-26 15:29:24,375 | INFO     | [monitor] control thread has ended
[2026-01-26 10:29:28] 2026-01-26 15:29:28,597 | INFO     | all workflow threads have been joined
[2026-01-26 10:29:28] 2026-01-26 15:29:28,598 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 10:29:28] 2026-01-26 15:29:28,598 | INFO     | traces error code: 0
[2026-01-26 10:29:28] 2026-01-26 15:29:28,598 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 10:29:28] 2026-01-26 15:29:28,699 [wrapper] ==== pilot stdout END ====
[2026-01-26 10:29:28] 2026-01-26 15:29:28,702 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 10:29:28] 2026-01-26 15:29:28,704 [wrapper] pilotpid: 21986
[2026-01-26 10:29:28] 2026-01-26 15:29:28,706 [wrapper] Pilot exit status: 0
[2026-01-26 10:29:28] 2026-01-26 15:29:28,716 [wrapper] pandaids: 6984063078
[2026-01-26 10:29:28] 2026-01-26 15:29:28,745 [wrapper] cleanup supervisor_pilot  6282 21987
[2026-01-26 10:29:28] 2026-01-26 15:29:28,747 [wrapper] Test setup, not cleaning
[2026-01-26 10:29:28] 2026-01-26 15:29:28,749 [wrapper] apfmon messages muted
[2026-01-26 10:29:28] 2026-01-26 15:29:28,752 [wrapper] ==== wrapper stdout END ====
[2026-01-26 10:29:28] 2026-01-26 15:29:28,754 [wrapper] ==== wrapper stderr END ====
[2026-01-26 10:29:28]  *** Error codes and diagnostics ***
[2026-01-26 10:29:28]     "exeErrorCode": 0,
[2026-01-26 10:29:28]     "exeErrorDiag": "",
[2026-01-26 10:29:28]     "pilotErrorCode": 0,
[2026-01-26 10:29:28]     "pilotErrorDiag": "",
[2026-01-26 10:29:28]  *** Listing of results directory ***
[2026-01-26 10:29:28] total 670040
[2026-01-26 10:29:28] -rwx------ 1 boincer umatlas     36322 Jan 26 02:41 runpilot2-wrapper.sh
[2026-01-26 10:29:28] -rw-r--r-- 1 boincer umatlas    584422 Jan 26 02:45 pilot3.tar.gz
[2026-01-26 10:29:28] -rw-r--r-- 1 boincer umatlas      5111 Jan 26 02:45 queuedata.json
[2026-01-26 10:29:28] -rw-r--r-- 1 boincer umatlas       100 Jan 26 07:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 10:29:28] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 07:11 run_atlas
[2026-01-26 10:29:28] -rw-r--r-- 1 boincer umatlas       105 Jan 26 07:11 job.xml
[2026-01-26 10:29:28] -rw-r--r-- 2 boincer umatlas 494071812 Jan 26 07:11 EVNT.48317949._000011.pool.root.1
[2026-01-26 10:29:28] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 07:11 start_atlas.sh
[2026-01-26 10:29:28] drwxrwx--x 2 boincer umatlas      4096 Jan 26 07:11 shared
[2026-01-26 10:29:28] -rw-r--r-- 2 boincer umatlas    597757 Jan 26 07:11 input.tar.gz
[2026-01-26 10:29:28] -rw-r--r-- 1 boincer umatlas         0 Jan 26 07:11 boinc_lockfile
[2026-01-26 10:29:28] -rw-r--r-- 1 boincer umatlas      2516 Jan 26 07:11 pandaJob.out
[2026-01-26 10:29:28] -rw------- 1 boincer umatlas        57 Jan 26 07:11 setup.sh.local
[2026-01-26 10:29:28] -rw------- 1 boincer umatlas   1002189 Jan 26 07:11 agis_schedconf.cvmfs.json
[2026-01-26 10:29:28] -rw------- 1 boincer umatlas       445 Jan 26 07:12 workernode_map.json
[2026-01-26 10:29:28] drwx------ 5 boincer umatlas      4096 Jan 26 07:12 pilot3
[2026-01-26 10:29:28] -rw-r--r-- 1 boincer umatlas      5952 Jan 26 10:27 init_data.xml
[2026-01-26 10:29:28] -rw------- 1 boincer umatlas 183924426 Jan 26 10:28 HITS.48317952._000538.pool.root.1
[2026-01-26 10:29:28] -rw-r--r-- 1 boincer umatlas       531 Jan 26 10:28 boinc_task_state.xml
[2026-01-26 10:29:28] -rw------- 1 boincer umatlas      1055 Jan 26 10:28 memory_monitor_summary.json
[2026-01-26 10:29:28] -rw------- 1 boincer umatlas   1516246 Jan 26 10:28 agis_ddmendpoints.agis.ALL.json
[2026-01-26 10:29:28] -rw------- 1 boincer umatlas    433794 Jan 26 10:28 log.48317952._000538.job.log.tgz.1
[2026-01-26 10:29:28] -rw------- 1 boincer umatlas      6421 Jan 26 10:28 heartbeat.json
[2026-01-26 10:29:28] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 10:29 boinc_mmap_file
[2026-01-26 10:29:28] -rw-r--r-- 1 boincer umatlas        28 Jan 26 10:29 wrapper_checkpoint.txt
[2026-01-26 10:29:28] -rw------- 1 boincer umatlas        95 Jan 26 10:29 pilot_heartbeat.json
[2026-01-26 10:29:28] -rw------- 1 boincer umatlas      4889 Jan 26 10:29 pilotlog.txt
[2026-01-26 10:29:28] -rw------- 1 boincer umatlas   1661498 Jan 26 10:29 log.48317952._000538.job.log.1
[2026-01-26 10:29:28] -rw------- 1 boincer umatlas       357 Jan 26 10:29 output.list
[2026-01-26 10:29:28] -rw-r--r-- 1 boincer umatlas       620 Jan 26 10:29 runtime_log
[2026-01-26 10:29:28] -rw------- 1 boincer umatlas   2109440 Jan 26 10:29 result.tar.gz
[2026-01-26 10:29:28] -rw-r--r-- 1 boincer umatlas      9342 Jan 26 10:29 runtime_log.err
[2026-01-26 10:29:28] -rw------- 1 boincer umatlas       661 Jan 26 10:29 FLnNDmSPW48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWv2KDmsNpwan.diag
[2026-01-26 10:29:28] -rw-r--r-- 1 boincer umatlas     20992 Jan 26 10:29 stderr.txt
[2026-01-26 10:29:28] HITS file was successfully produced:
[2026-01-26 10:29:28] -rw------- 1 boincer umatlas 183924426 Jan 26 10:28 shared/HITS.pool.root.1
[2026-01-26 10:29:28]  *** Contents of shared directory: ***
[2026-01-26 10:29:28] total 664776
[2026-01-26 10:29:28] -rw-r--r-- 2 boincer umatlas 494071812 Jan 26 07:11 ATLAS.root_0
[2026-01-26 10:29:28] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 07:11 start_atlas.sh
[2026-01-26 10:29:28] -rw-r--r-- 2 boincer umatlas    597757 Jan 26 07:11 input.tar.gz
[2026-01-26 10:29:28] -rw------- 1 boincer umatlas 183924426 Jan 26 10:28 HITS.pool.root.1
[2026-01-26 10:29:28] -rw------- 1 boincer umatlas   2109440 Jan 26 10:29 result.tar.gz
10:29:30 (18314): run_atlas exited; CPU time 89749.842297
10:29:30 (18314): called boinc_finish(0)

</stderr_txt>
]]>

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