Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:39:41 (32013): wrapper (7.7.26015): starting
18:39:41 (32013): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 18:39:41] Arguments: --nthreads 8
[2026-01-26 18:39:41] Threads: 8
[2026-01-26 18:39:41] Checking for CVMFS
[2026-01-26 18:39:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 18:39:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 18:39:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 18:39:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 18:39:44] 2.11.2.0 31595 60205 132500 155555 0 54 24102909 25165825 899 130560 0 22333139 99.803 15643317 2511 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-26 18:39:44] CVMFS is ok
[2026-01-26 18:39:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 18:39:44] Checking for apptainer binary...
[2026-01-26 18:39:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 18:39:44] Running /usr/bin/apptainer --version
[2026-01-26 18:39:45] apptainer version 1.3.2-1.el7
[2026-01-26 18:39:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 18:40:21] cg-vwn421.simple-grid.lan
[2026-01-26 18:40:21] apptainer works
[2026-01-26 18:40:21] Set ATHENA_PROC_NUMBER=8
[2026-01-26 18:40:21] Set ATHENA_CORE_NUMBER=8
[2026-01-26 18:40:22] Starting ATLAS job with PandaID=6984061839
[2026-01-26 18:40:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 23:08:23]  *** The last 200 lines of the pilot log: ***
[2026-01-26 23:08:23] 2026-01-26 22:07:11,801 | INFO     | total number of processed events: 400 (read)
[2026-01-26 23:08:23] 2026-01-26 22:07:11,803 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-6984061839/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 23:08:23] 2026-01-26 22:07:11,803 | INFO     | extracted standard info from prmon json
[2026-01-26 23:08:23] 2026-01-26 22:07:11,804 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 23:08:23] 2026-01-26 22:07:11,804 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 23:08:23] 2026-01-26 22:07:11,804 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 23:08:23] 2026-01-26 22:07:11,804 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 23:08:23] 2026-01-26 22:07:11,810 | INFO     | fitting pss+swap vs Time
[2026-01-26 23:08:23] 2026-01-26 22:07:11,810 | INFO     | sum of square deviations: 4962187923.0
[2026-01-26 23:08:23] 2026-01-26 22:07:11,813 | INFO     | sum of deviations: 123177632572.00005
[2026-01-26 23:08:23] 2026-01-26 22:07:11,813 | INFO     | mean x: 1769457563.5
[2026-01-26 23:08:23] 2026-01-26 22:07:11,813 | INFO     | mean y: 2397038.4285714286
[2026-01-26 23:08:23] 2026-01-26 22:07:11,813 | INFO     | intersect: -43921290857.04685
[2026-01-26 23:08:23] 2026-01-26 22:07:11,814 | INFO     | chi2: 9.580351101255944
[2026-01-26 23:08:23] 2026-01-26 22:07:11,814 | INFO     | sum of square deviations: 4672638308.0
[2026-01-26 23:08:23] 2026-01-26 22:07:11,816 | INFO     | sum of deviations: 156054413696.99997
[2026-01-26 23:08:23] 2026-01-26 22:07:11,817 | INFO     | mean x: 1769457411.0
[2026-01-26 23:08:23] 2026-01-26 22:07:11,817 | INFO     | mean y: 2414122.0283400808
[2026-01-26 23:08:23] 2026-01-26 22:07:11,817 | INFO     | intersect: -59093030599.77967
[2026-01-26 23:08:23] 2026-01-26 22:07:11,817 | INFO     | chi2: 7.900949435745834
[2026-01-26 23:08:23] 2026-01-26 22:07:11,818 | INFO     | current chi2=7.900949435745834 (change=17.529646333002844 %)
[2026-01-26 23:08:23] 2026-01-26 22:07:11,818 | INFO     | right removable region: 246
[2026-01-26 23:08:23] 2026-01-26 22:07:11,818 | INFO     | sum of square deviations: 4672638308.0
[2026-01-26 23:08:23] 2026-01-26 22:07:11,820 | INFO     | sum of deviations: 36995494842.000015
[2026-01-26 23:08:23] 2026-01-26 22:07:11,821 | INFO     | mean x: 1769457716.0
[2026-01-26 23:08:23] 2026-01-26 22:07:11,821 | INFO     | mean y: 2442401.4412955465
[2026-01-26 23:08:23] 2026-01-26 22:07:11,821 | INFO     | intersect: -14007194016.027191
[2026-01-26 23:08:23] 2026-01-26 22:07:11,821 | INFO     | chi2: 4.653588157504432
[2026-01-26 23:08:23] 2026-01-26 22:07:11,821 | INFO     | current chi2=4.653588157504432 (change=51.425703418172574 %)
[2026-01-26 23:08:23] 2026-01-26 22:07:11,822 | INFO     | sum of square deviations: 4394577280.5
[2026-01-26 23:08:23] 2026-01-26 22:07:11,824 | INFO     | sum of deviations: -28459393779.0
[2026-01-26 23:08:23] 2026-01-26 22:07:11,824 | INFO     | mean x: 1769457868.5
[2026-01-26 23:08:23] 2026-01-26 22:07:11,824 | INFO     | mean y: 2478256.6694214875
[2026-01-26 23:08:23] 2026-01-26 22:07:11,824 | INFO     | intersect: 11461532231.768019
[2026-01-26 23:08:23] 2026-01-26 22:07:11,825 | INFO     | chi2: 2.0237641278847396
[2026-01-26 23:08:23] 2026-01-26 22:07:11,825 | INFO     | current chi2=2.0237641278847396 (change=56.51174836730678 %)
[2026-01-26 23:08:23] 2026-01-26 22:07:11,826 | INFO     | sum of square deviations: 4127772278.0
[2026-01-26 23:08:23] 2026-01-26 22:07:11,828 | INFO     | sum of deviations: -37809202146.0
[2026-01-26 23:08:23] 2026-01-26 22:07:11,828 | INFO     | mean x: 1769458021.0
[2026-01-26 23:08:23] 2026-01-26 22:07:11,828 | INFO     | mean y: 2483559.780590717
[2026-01-26 23:08:23] 2026-01-26 22:07:11,828 | INFO     | intersect: 16210208089.89095
[2026-01-26 23:08:23] 2026-01-26 22:07:11,829 | INFO     | chi2: 1.9419435256540705
[2026-01-26 23:08:23] 2026-01-26 22:07:11,829 | INFO     | current chi2=1.9419435256540705 (change=4.042991033554336 %)
[2026-01-26 23:08:23] 2026-01-26 22:07:11,829 | INFO     | left removable region: 30
[2026-01-26 23:08:23] 2026-01-26 22:07:11,829 | INFO     | sum of square deviations: 3124858590.0
[2026-01-26 23:08:23] 2026-01-26 22:07:11,831 | INFO     | sum of deviations: 6502629615.499999
[2026-01-26 23:08:23] 2026-01-26 22:07:11,831 | INFO     | mean x: 1769458295.5
[2026-01-26 23:08:23] 2026-01-26 22:07:11,831 | INFO     | mean y: 2497006.2546296297
[2026-01-26 23:08:23] 2026-01-26 22:07:11,832 | INFO     | intersect: -3679631827.520997
[2026-01-26 23:08:23] 2026-01-26 22:07:11,832 | INFO     | chi2: 0.00020474046382745978
[2026-01-26 23:08:23] 2026-01-26 22:07:11,832 | INFO     | current memory leak: 2.08 B/s (using 216 data points, chi2=0.00)
[2026-01-26 23:08:23] 2026-01-26 22:07:11,833 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-01-26 23:08:23] 2026-01-26 22:07:11,833 | INFO     | ..............................
[2026-01-26 23:08:23] 2026-01-26 22:07:11,833 | INFO     | . Timing measurements:
[2026-01-26 23:08:23] 2026-01-26 22:07:11,833 | INFO     | . get job = 0 s
[2026-01-26 23:08:23] 2026-01-26 22:07:11,833 | INFO     | . initial setup = 122 s
[2026-01-26 23:08:23] 2026-01-26 22:07:11,834 | INFO     | . payload setup = 149 s
[2026-01-26 23:08:23] 2026-01-26 22:07:11,834 | INFO     | . stage-in = 0 s
[2026-01-26 23:08:23] 2026-01-26 22:07:11,834 | INFO     | . payload execution = 15461 s
[2026-01-26 23:08:23] 2026-01-26 22:07:11,834 | INFO     | . stage-out = 3 s
[2026-01-26 23:08:23] 2026-01-26 22:07:11,834 | INFO     | . log creation = 1 s
[2026-01-26 23:08:23] 2026-01-26 22:07:11,834 | INFO     | ..............................
[2026-01-26 23:08:23] 2026-01-26 22:07:12,011 | INFO     | 
[2026-01-26 23:08:23] 2026-01-26 22:07:12,011 | INFO     | job summary report
[2026-01-26 23:08:23] 2026-01-26 22:07:12,011 | INFO     | --------------------------------------------------
[2026-01-26 23:08:23] 2026-01-26 22:07:12,011 | INFO     | PanDA job id: 6984061839
[2026-01-26 23:08:23] 2026-01-26 22:07:12,011 | INFO     | task id: 48317872
[2026-01-26 23:08:23] 2026-01-26 22:07:12,011 | INFO     | errors: (none)
[2026-01-26 23:08:23] 2026-01-26 22:07:12,011 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 23:08:23] 2026-01-26 22:07:12,012 | INFO     | pilot state: finished 
[2026-01-26 23:08:23] 2026-01-26 22:07:12,012 | INFO     | transexitcode: 0
[2026-01-26 23:08:23] 2026-01-26 22:07:12,012 | INFO     | exeerrorcode: 0
[2026-01-26 23:08:23] 2026-01-26 22:07:12,012 | INFO     | exeerrordiag: 
[2026-01-26 23:08:23] 2026-01-26 22:07:12,012 | INFO     | exitcode: 0
[2026-01-26 23:08:23] 2026-01-26 22:07:12,012 | INFO     | exitmsg: OK
[2026-01-26 23:08:23] 2026-01-26 22:07:12,012 | INFO     | cpuconsumptiontime: 57572 s
[2026-01-26 23:08:23] 2026-01-26 22:07:12,012 | INFO     | nevents: 400
[2026-01-26 23:08:23] 2026-01-26 22:07:12,012 | INFO     | neventsw: 0
[2026-01-26 23:08:23] 2026-01-26 22:07:12,013 | INFO     | pid: 8042
[2026-01-26 23:08:23] 2026-01-26 22:07:12,013 | INFO     | pgrp: 8042
[2026-01-26 23:08:23] 2026-01-26 22:07:12,013 | INFO     | corecount: 8
[2026-01-26 23:08:23] 2026-01-26 22:07:12,013 | INFO     | event service: False
[2026-01-26 23:08:23] 2026-01-26 22:07:12,013 | INFO     | sizes: {0: 2283145, 1: 2283831, 2: 2284292, 15614: 2315474, 15615: 2315473, 15619: 2324529, 15620: 2324713, 15623: 2324907}
[2026-01-26 23:08:23] 2026-01-26 22:07:12,013 | INFO     | --------------------------------------------------
[2026-01-26 23:08:23] 2026-01-26 22:07:12,013 | INFO     | 
[2026-01-26 23:08:23] 2026-01-26 22:07:12,013 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2026-01-26 23:08:23] 2026-01-26 22:07:12,324 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 23:08:23] 2026-01-26 22:07:12,324 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 23:08:23] 2026-01-26 22:07:12,325 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 23:08:23] 2026-01-26 22:07:12,325 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 23:08:23] 2026-01-26 22:07:12,325 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 23:08:23] 2026-01-26 22:07:12,325 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 23:08:23] 2026-01-26 22:07:12,325 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 23:08:23] 2026-01-26 22:07:12,325 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 23:08:23] 2026-01-26 22:07:12,325 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 23:08:23] 2026-01-26 22:07:12,325 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 23:08:23] 2026-01-26 22:07:12,325 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 23:08:23] 2026-01-26 22:07:12,326 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 23:08:23] 2026-01-26 22:07:12,326 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 23:08:23] 2026-01-26 22:07:12,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 23:08:23] 2026-01-26 22:07:12,326 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 23:08:23] 2026-01-26 22:07:12,326 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 23:08:23] 2026-01-26 22:07:12,326 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 23:08:23] 2026-01-26 22:07:12,326 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 23:08:23] 2026-01-26 22:07:12,326 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 23:08:23] 2026-01-26 22:07:12,327 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 23:08:23] 2026-01-26 22:07:12,327 | INFO     | job 6984061839 has completed (purged errors)
[2026-01-26 23:08:23] 2026-01-26 22:07:12,327 | INFO     | overall cleanup function is called
[2026-01-26 23:08:23] 2026-01-26 22:07:13,336 | INFO     | --- collectZombieJob: --- 10, [8042]
[2026-01-26 23:08:23] 2026-01-26 22:07:13,336 | INFO     | zombie collector waiting for pid 8042
[2026-01-26 23:08:23] 2026-01-26 22:07:13,336 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 23:08:23] 2026-01-26 22:07:13,336 | INFO     | collected zombie processes
[2026-01-26 23:08:23] 2026-01-26 22:07:13,336 | INFO     | will attempt to kill all subprocesses of pid=8042
[2026-01-26 23:08:23] 2026-01-26 22:07:13,436 | INFO     | process IDs to be killed: [8042] (in reverse order)
[2026-01-26 23:08:23] 2026-01-26 22:07:14,069 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 23:08:23] 2026-01-26 22:07:14,070 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 23:08:23] 2026-01-26 22:07:14,072 | INFO     | did not find any defunct processes belonging to 8042
[2026-01-26 23:08:23] 2026-01-26 22:07:14,074 | INFO     | did not find any defunct processes belonging to 8042
[2026-01-26 23:08:23] 2026-01-26 22:07:14,074 | INFO     | ready for new job
[2026-01-26 23:08:23] 2026-01-26 22:07:14,074 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 23:08:23] 2026-01-26 22:07:14,076 | INFO     | **************************************
[2026-01-26 23:08:23] 2026-01-26 22:07:14,077 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 23:08:23] 2026-01-26 22:07:14,077 | INFO     | **************************************
[2026-01-26 23:08:23] 2026-01-26 22:07:14,077 | INFO     | 
[2026-01-26 23:08:23] 2026-01-26 22:07:14,077 | INFO     | pilot is running in a VM
[2026-01-26 23:08:23] 2026-01-26 22:07:14,078 | INFO     | architecture information:
[2026-01-26 23:08:23] 2026-01-26 22:07:14,078 | INFO     | executing command: cat /etc/os-release
[2026-01-26 23:08:23] 2026-01-26 22:07:14,263 | INFO     | cat /etc/os-release:
[2026-01-26 23:08:23] NAME="CentOS Linux"
[2026-01-26 23:08:23] VERSION="7 (Core)"
[2026-01-26 23:08:23] ID="centos"
[2026-01-26 23:08:23] ID_LIKE="rhel fedora"
[2026-01-26 23:08:23] VERSION_ID="7"
[2026-01-26 23:08:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 23:08:23] ANSI_COLOR="0;31"
[2026-01-26 23:08:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 23:08:23] HOME_URL="https://www.centos.org/"
[2026-01-26 23:08:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 23:08:23] 
[2026-01-26 23:08:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 23:08:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 23:08:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 23:08:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 23:08:23] 
[2026-01-26 23:08:23] 2026-01-26 22:07:14,263 | INFO     | **************************************
[2026-01-26 23:08:23] 2026-01-26 22:07:14,767 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2026-01-26 23:08:23] 2026-01-26 22:07:15,055 | INFO     | sufficient remaining disk space (494568210432 B)
[2026-01-26 23:08:23] 2026-01-26 22:07:15,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 23:08:23] 2026-01-26 22:07:15,056 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 23:08:23] 2026-01-26 22:07:15,056 | INFO     | update_server=False
[2026-01-26 23:08:23] 2026-01-26 22:07:15,056 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 23:08:23] 2026-01-26 22:07:15,297 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 23:08:23] 2026-01-26 22:07:15,297 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 23:08:23] 2026-01-26 22:07:15,297 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 23:08:23] 2026-01-26 22:07:15,297 | INFO     | will abort loop
[2026-01-26 23:08:23] 2026-01-26 22:07:15,377 | INFO     | all data control threads have been joined
[2026-01-26 23:08:23] 2026-01-26 22:07:15,412 | INFO     | all payload control threads have been joined
[2026-01-26 23:08:23] 2026-01-26 22:07:15,521 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 23:08:23] 2026-01-26 22:07:15,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 23:08:23] 2026-01-26 22:07:16,050 | INFO     | all job control threads have been joined
[2026-01-26 23:08:23] 2026-01-26 22:07:16,062 | INFO     | [job] retrieve thread has finished
[2026-01-26 23:08:23] 2026-01-26 22:07:16,122 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 23:08:23] 2026-01-26 22:07:16,166 | INFO     | [payload] validate_post thread has finished
[2026-01-26 23:08:23] 2026-01-26 22:07:16,307 | INFO     | [job] job monitor thread has finished
[2026-01-26 23:08:23] 2026-01-26 22:07:16,383 | INFO     | [data] control thread has finished
[2026-01-26 23:08:23] 2026-01-26 22:07:16,418 | INFO     | [payload] control thread has finished
[2026-01-26 23:08:23] 2026-01-26 22:07:16,715 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 23:08:23] 2026-01-26 22:07:16,873 | INFO     | [job] validate thread has finished
[2026-01-26 23:08:23] 2026-01-26 22:07:16,921 | INFO     | [payload] failed_post thread has finished
[2026-01-26 23:08:23] 2026-01-26 22:07:17,021 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 23:08:23] 2026-01-26 22:07:17,056 | INFO     | [job] control thread has finished
[2026-01-26 23:08:23] 2026-01-26 22:07:17,224 | INFO     | [data] copytool_in thread has finished
[2026-01-26 23:08:23] 2026-01-26 22:07:17,254 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 23:08:23] 2026-01-26 22:07:17,436 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 23:08:23] 2026-01-26 22:07:17,873 | INFO     | [data] copytool_out thread has finished
[2026-01-26 23:08:23] 2026-01-26 22:07:18,027 | INFO     | [job] queue monitor thread has finished
[2026-01-26 23:08:23] 2026-01-26 22:07:19,533 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 23:08:23] 2026-01-26 22:07:44,883 | INFO     | PID=3587 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-26 23:08:23] 2026-01-26 22:07:44,883 | INFO     | .. there are 2 such processes running
[2026-01-26 23:08:23] 2026-01-26 22:07:44,884 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 23:08:23] 2026-01-26 22:07:44,884 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 23:08:23] 2026-01-26 22:07:44,884 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 23:08:23] 2026-01-26 22:08:13,171 | INFO     | [monitor] cgroup control has ended
[2026-01-26 23:08:23] 2026-01-26 22:08:13,613 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566705485632)>', '<ExcThread(monitor, started 140565689661184)>']
[2026-01-26 23:08:23] 2026-01-26 22:08:14,058 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 23:08:23] 2026-01-26 22:08:14,058 | INFO     | [monitor] control thread has ended
[2026-01-26 23:08:23] 2026-01-26 22:08:18,639 | INFO     | all workflow threads have been joined
[2026-01-26 23:08:23] 2026-01-26 22:08:18,639 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 23:08:23] 2026-01-26 22:08:18,639 | INFO     | traces error code: 0
[2026-01-26 23:08:23] 2026-01-26 22:08:18,639 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 23:08:23] 2026-01-26 22:08:19,167 [wrapper] ==== pilot stdout END ====
[2026-01-26 23:08:23] 2026-01-26 22:08:19,259 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 23:08:23] 2026-01-26 22:08:19,356 [wrapper] pilotpid: 3587
[2026-01-26 23:08:23] 2026-01-26 22:08:19,455 [wrapper] Pilot exit status: 0
[2026-01-26 23:08:23] 2026-01-26 22:08:20,057 [wrapper] pandaids: 6984061839
[2026-01-26 23:08:23] 2026-01-26 22:08:21,235 [wrapper] cleanup supervisor_pilot 14335 3588
[2026-01-26 23:08:23] 2026-01-26 22:08:21,358 [wrapper] Test setup, not cleaning
[2026-01-26 23:08:23] 2026-01-26 22:08:21,469 [wrapper] apfmon messages muted
[2026-01-26 23:08:23] 2026-01-26 22:08:21,591 [wrapper] ==== wrapper stdout END ====
[2026-01-26 23:08:23] 2026-01-26 22:08:21,670 [wrapper] ==== wrapper stderr END ====
[2026-01-26 23:08:23]  *** Error codes and diagnostics ***
[2026-01-26 23:08:23]     "exeErrorCode": 0,
[2026-01-26 23:08:23]     "exeErrorDiag": "",
[2026-01-26 23:08:23]     "pilotErrorCode": 0,
[2026-01-26 23:08:23]     "pilotErrorDiag": "",
[2026-01-26 23:08:23]  *** Listing of results directory ***
[2026-01-26 23:08:23] total 671396
[2026-01-26 23:08:23] -rw-r--r--. 1 boinc boinc    584422 Jan 26 08:37 pilot3.tar.gz
[2026-01-26 23:08:23] -rwx------. 1 boinc boinc     36322 Jan 26 08:40 runpilot2-wrapper.sh
[2026-01-26 23:08:23] -rw-r--r--. 1 boinc boinc      5111 Jan 26 08:43 queuedata.json
[2026-01-26 23:08:23] -rw-r--r--. 1 boinc boinc       100 Jan 26 18:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 23:08:23] -rwxr-xr-x. 1 boinc boinc      7986 Jan 26 18:39 run_atlas
[2026-01-26 23:08:23] -rw-r--r--. 1 boinc boinc       105 Jan 26 18:39 job.xml
[2026-01-26 23:08:23] -rw-r--r--. 1 boinc boinc      6391 Jan 26 18:39 init_data.xml
[2026-01-26 23:08:23] -rw-r--r--. 2 boinc boinc 493675280 Jan 26 18:39 EVNT.48317869._000057.pool.root.1
[2026-01-26 23:08:23] -rw-r--r--. 2 boinc boinc     15845 Jan 26 18:39 start_atlas.sh
[2026-01-26 23:08:23] drwxrwx--x. 2 boinc boinc        68 Jan 26 18:39 shared
[2026-01-26 23:08:23] -rw-r--r--. 2 boinc boinc    597755 Jan 26 18:39 input.tar.gz
[2026-01-26 23:08:23] -rw-r--r--. 1 boinc boinc         0 Jan 26 18:39 boinc_lockfile
[2026-01-26 23:08:23] -rw-r--r--. 1 boinc boinc      2516 Jan 26 18:40 pandaJob.out
[2026-01-26 23:08:23] -rw-------. 1 boinc boinc       415 Jan 26 18:46 workernode_map.json
[2026-01-26 23:08:23] -rw-------. 1 boinc boinc   1006384 Jan 26 18:46 agis_schedconf.cvmfs.json
[2026-01-26 23:08:23] drwx------. 5 boinc boinc      4096 Jan 26 18:46 pilot3
[2026-01-26 23:08:23] -rw-------. 1 boinc boinc 184471553 Jan 26 23:05 HITS.48317872._002854.pool.root.1
[2026-01-26 23:08:23] -rw-r--r--. 1 boinc boinc       532 Jan 26 23:05 boinc_task_state.xml
[2026-01-26 23:08:23] -rw-------. 1 boinc boinc      1014 Jan 26 23:06 memory_monitor_summary.json
[2026-01-26 23:08:23] -rw-------. 1 boinc boinc   1516246 Jan 26 23:07 agis_ddmendpoints.agis.ALL.json
[2026-01-26 23:08:23] -rw-------. 1 boinc boinc    514634 Jan 26 23:07 log.48317872._002854.job.log.tgz.1
[2026-01-26 23:08:23] -rw-------. 1 boinc boinc        95 Jan 26 23:07 pilot_heartbeat.json
[2026-01-26 23:08:23] -rw-------. 1 boinc boinc      6320 Jan 26 23:07 heartbeat.json
[2026-01-26 23:08:23] -rw-r--r--. 1 boinc boinc        28 Jan 26 23:08 wrapper_checkpoint.txt
[2026-01-26 23:08:23] -rw-r--r--. 1 boinc boinc      8192 Jan 26 23:08 boinc_mmap_file
[2026-01-26 23:08:23] -rw-------. 1 boinc boinc      5066 Jan 26 23:08 pilotlog.txt
[2026-01-26 23:08:23] -rw-------. 1 boinc boinc   2202673 Jan 26 23:08 log.48317872._002854.job.log.1
[2026-01-26 23:08:23] -rw-------. 1 boinc boinc       357 Jan 26 23:08 output.list
[2026-01-26 23:08:23] -rw-r--r--. 1 boinc boinc       620 Jan 26 23:08 runtime_log
[2026-01-26 23:08:23] -rw-------. 1 boinc boinc   2734080 Jan 26 23:08 result.tar.gz
[2026-01-26 23:08:23] -rw-------. 1 boinc boinc       655 Jan 26 23:08 ZTSKDmdOW48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHu2KDmEHroRm.diag
[2026-01-26 23:08:23] -rw-r--r--. 1 boinc boinc      8832 Jan 26 23:08 runtime_log.err
[2026-01-26 23:08:23] -rw-r--r--. 1 boinc boinc     20724 Jan 26 23:08 stderr.txt
[2026-01-26 23:08:23] HITS file was successfully produced:
[2026-01-26 23:08:23] -rw-------. 1 boinc boinc 184471553 Jan 26 23:05 shared/HITS.pool.root.1
[2026-01-26 23:08:23]  *** Contents of shared directory: ***
[2026-01-26 23:08:23] total 665532
[2026-01-26 23:08:23] -rw-r--r--. 2 boinc boinc 493675280 Jan 26 18:39 ATLAS.root_0
[2026-01-26 23:08:23] -rw-r--r--. 2 boinc boinc     15845 Jan 26 18:39 start_atlas.sh
[2026-01-26 23:08:23] -rw-r--r--. 2 boinc boinc    597755 Jan 26 18:39 input.tar.gz
[2026-01-26 23:08:23] -rw-------. 1 boinc boinc 184471553 Jan 26 23:05 HITS.pool.root.1
[2026-01-26 23:08:23] -rw-------. 1 boinc boinc   2734080 Jan 26 23:08 result.tar.gz
23:08:25 (32013): run_atlas exited; CPU time 57745.313927
23:08:25 (32013): called boinc_finish(0)

</stderr_txt>
]]>

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