Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:03:42 (29821): wrapper (7.7.26015): starting
00:03:42 (29821): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 00:03:42] Arguments: --nthreads 8
[2026-01-27 00:03:42] Threads: 8
[2026-01-27 00:03:42] Checking for CVMFS
[2026-01-27 00:03:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 00:03:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 00:03:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 00:03:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 00:03:45] 2.11.2.0 5634 60508 135436 155564 1 56 12681943 25165824 899 130560 0 19679417 99.817 15271503 3108 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-27 00:03:45] CVMFS is ok
[2026-01-27 00:03:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 00:03:45] Checking for apptainer binary...
[2026-01-27 00:03:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 00:03:45] Running /usr/bin/apptainer --version
[2026-01-27 00:03:45] apptainer version 1.3.2-1.el7
[2026-01-27 00:03:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 00:03:59] cg-vwn416.simple-grid.lan
[2026-01-27 00:03:59] apptainer works
[2026-01-27 00:03:59] Set ATHENA_PROC_NUMBER=8
[2026-01-27 00:03:59] Set ATHENA_CORE_NUMBER=8
[2026-01-27 00:03:59] Starting ATLAS job with PandaID=6984063219
[2026-01-27 00:03:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 04:47:38]  *** The last 200 lines of the pilot log: ***
[2026-01-27 04:47:38] 2026-01-27 03:47:02,077 | INFO     | job 6984063219 has finished - writing final server update
[2026-01-27 04:47:38] 2026-01-27 03:47:02,078 | INFO     | total number of processed events: 400 (read)
[2026-01-27 04:47:38] 2026-01-27 03:47:02,080 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6984063219/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 04:47:38] 2026-01-27 03:47:02,080 | INFO     | extracted standard info from prmon json
[2026-01-27 04:47:38] 2026-01-27 03:47:02,081 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 04:47:38] 2026-01-27 03:47:02,081 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 04:47:38] 2026-01-27 03:47:02,081 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 04:47:38] 2026-01-27 03:47:02,081 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 04:47:38] 2026-01-27 03:47:02,087 | INFO     | fitting pss+swap vs Time
[2026-01-27 04:47:38] 2026-01-27 03:47:02,087 | INFO     | sum of square deviations: 5902093918.0
[2026-01-27 04:47:38] 2026-01-27 03:47:02,090 | INFO     | sum of deviations: 62912640909.00001
[2026-01-27 04:47:38] 2026-01-27 03:47:02,090 | INFO     | mean x: 1769477458.0
[2026-01-27 04:47:38] 2026-01-27 03:47:02,090 | INFO     | mean y: 2472076.119850187
[2026-01-27 04:47:38] 2026-01-27 03:47:02,091 | INFO     | intersect: -18859054266.6272
[2026-01-27 04:47:38] 2026-01-27 03:47:02,091 | INFO     | chi2: 7.8045399441111964
[2026-01-27 04:47:38] 2026-01-27 03:47:02,092 | INFO     | sum of square deviations: 5576683165.5
[2026-01-27 04:47:38] 2026-01-27 03:47:02,106 | INFO     | sum of deviations: 79649964929.99997
[2026-01-27 04:47:38] 2026-01-27 03:47:02,107 | INFO     | mean x: 1769477305.5
[2026-01-27 04:47:38] 2026-01-27 03:47:02,107 | INFO     | mean y: 2479794.0839694655
[2026-01-27 04:47:38] 2026-01-27 03:47:02,107 | INFO     | intersect: -25270393192.393005
[2026-01-27 04:47:38] 2026-01-27 03:47:02,107 | INFO     | chi2: 7.1017830475026
[2026-01-27 04:47:38] 2026-01-27 03:47:02,107 | INFO     | current chi2=7.1017830475026 (change=9.004462808071748 %)
[2026-01-27 04:47:38] 2026-01-27 03:47:02,108 | INFO     | right removable region: 261
[2026-01-27 04:47:38] 2026-01-27 03:47:02,108 | INFO     | sum of square deviations: 5576683165.5
[2026-01-27 04:47:38] 2026-01-27 03:47:02,111 | INFO     | sum of deviations: -30279199336.999992
[2026-01-27 04:47:38] 2026-01-27 03:47:02,111 | INFO     | mean x: 1769477610.5
[2026-01-27 04:47:38] 2026-01-27 03:47:02,111 | INFO     | mean y: 2515719.5954198474
[2026-01-27 04:47:38] 2026-01-27 03:47:02,111 | INFO     | intersect: 9610084179.311588
[2026-01-27 04:47:38] 2026-01-27 03:47:02,112 | INFO     | chi2: 2.95433297847729
[2026-01-27 04:47:38] 2026-01-27 03:47:02,112 | INFO     | current chi2=2.95433297847729 (change=62.14596888947389 %)
[2026-01-27 04:47:38] 2026-01-27 03:47:02,112 | INFO     | sum of square deviations: 5263458688.0
[2026-01-27 04:47:38] 2026-01-27 03:47:02,115 | INFO     | sum of deviations: -86220794833.00002
[2026-01-27 04:47:38] 2026-01-27 03:47:02,115 | INFO     | mean x: 1769477763.0
[2026-01-27 04:47:38] 2026-01-27 03:47:02,115 | INFO     | mean y: 2542861.0817120625
[2026-01-27 04:47:38] 2026-01-27 03:47:02,115 | INFO     | intersect: 28988384340.75532
[2026-01-27 04:47:38] 2026-01-27 03:47:02,116 | INFO     | chi2: 1.0841139614223148
[2026-01-27 04:47:38] 2026-01-27 03:47:02,116 | INFO     | current chi2=1.0841139614223148 (change=63.304273102584254 %)
[2026-01-27 04:47:38] 2026-01-27 03:47:02,116 | INFO     | sum of square deviations: 4962187923.0
[2026-01-27 04:47:38] 2026-01-27 03:47:02,119 | INFO     | sum of deviations: -90151333706.50002
[2026-01-27 04:47:38] 2026-01-27 03:47:02,119 | INFO     | mean x: 1769477915.5
[2026-01-27 04:47:38] 2026-01-27 03:47:02,119 | INFO     | mean y: 2544816.0595238097
[2026-01-27 04:47:38] 2026-01-27 03:47:02,119 | INFO     | intersect: 32149814633.70092
[2026-01-27 04:47:38] 2026-01-27 03:47:02,119 | INFO     | chi2: 1.0312595596922711
[2026-01-27 04:47:38] 2026-01-27 03:47:02,120 | INFO     | current chi2=1.0312595596922711 (change=4.875354769963551 %)
[2026-01-27 04:47:38] 2026-01-27 03:47:02,120 | INFO     | left removable region: 30
[2026-01-27 04:47:38] 2026-01-27 03:47:02,120 | INFO     | sum of square deviations: 3822136780.0
[2026-01-27 04:47:38] 2026-01-27 03:47:02,122 | INFO     | sum of deviations: -49334729477.00001
[2026-01-27 04:47:38] 2026-01-27 03:47:02,122 | INFO     | mean x: 1769478190.0
[2026-01-27 04:47:38] 2026-01-27 03:47:02,122 | INFO     | mean y: 2541984.9134199135
[2026-01-27 04:47:38] 2026-01-27 03:47:02,123 | INFO     | intersect: 22842312731.972248
[2026-01-27 04:47:38] 2026-01-27 03:47:02,123 | INFO     | chi2: 0.22222066544625071
[2026-01-27 04:47:38] 2026-01-27 03:47:02,123 | INFO     | current memory leak: -12.91 B/s (using 231 data points, chi2=0.22)
[2026-01-27 04:47:38] 2026-01-27 03:47:02,124 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-27 04:47:38] 2026-01-27 03:47:02,124 | INFO     | ..............................
[2026-01-27 04:47:38] 2026-01-27 03:47:02,124 | INFO     | . Timing measurements:
[2026-01-27 04:47:38] 2026-01-27 03:47:02,124 | INFO     | . get job = 0 s
[2026-01-27 04:47:38] 2026-01-27 03:47:02,124 | INFO     | . initial setup = 126 s
[2026-01-27 04:47:38] 2026-01-27 03:47:02,125 | INFO     | . payload setup = 149 s
[2026-01-27 04:47:38] 2026-01-27 03:47:02,125 | INFO     | . stage-in = 0 s
[2026-01-27 04:47:38] 2026-01-27 03:47:02,125 | INFO     | . payload execution = 16399 s
[2026-01-27 04:47:38] 2026-01-27 03:47:02,125 | INFO     | . stage-out = 4 s
[2026-01-27 04:47:38] 2026-01-27 03:47:02,125 | INFO     | . log creation = 1 s
[2026-01-27 04:47:38] 2026-01-27 03:47:02,125 | INFO     | ..............................
[2026-01-27 04:47:38] 2026-01-27 03:47:02,290 | INFO     | 
[2026-01-27 04:47:38] 2026-01-27 03:47:02,290 | INFO     | job summary report
[2026-01-27 04:47:38] 2026-01-27 03:47:02,291 | INFO     | --------------------------------------------------
[2026-01-27 04:47:38] 2026-01-27 03:47:02,291 | INFO     | PanDA job id: 6984063219
[2026-01-27 04:47:38] 2026-01-27 03:47:02,291 | INFO     | task id: 48317952
[2026-01-27 04:47:38] 2026-01-27 03:47:02,291 | INFO     | errors: (none)
[2026-01-27 04:47:38] 2026-01-27 03:47:02,291 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 04:47:38] 2026-01-27 03:47:02,291 | INFO     | pilot state: finished 
[2026-01-27 04:47:38] 2026-01-27 03:47:02,291 | INFO     | transexitcode: 0
[2026-01-27 04:47:38] 2026-01-27 03:47:02,291 | INFO     | exeerrorcode: 0
[2026-01-27 04:47:38] 2026-01-27 03:47:02,292 | INFO     | exeerrordiag: 
[2026-01-27 04:47:38] 2026-01-27 03:47:02,292 | INFO     | exitcode: 0
[2026-01-27 04:47:38] 2026-01-27 03:47:02,292 | INFO     | exitmsg: OK
[2026-01-27 04:47:38] 2026-01-27 03:47:02,292 | INFO     | cpuconsumptiontime: 62026 s
[2026-01-27 04:47:38] 2026-01-27 03:47:02,292 | INFO     | nevents: 400
[2026-01-27 04:47:38] 2026-01-27 03:47:02,292 | INFO     | neventsw: 0
[2026-01-27 04:47:38] 2026-01-27 03:47:02,292 | INFO     | pid: 5902
[2026-01-27 04:47:38] 2026-01-27 03:47:02,292 | INFO     | pgrp: 5902
[2026-01-27 04:47:38] 2026-01-27 03:47:02,292 | INFO     | corecount: 8
[2026-01-27 04:47:38] 2026-01-27 03:47:02,292 | INFO     | event service: False
[2026-01-27 04:47:38] 2026-01-27 03:47:02,293 | INFO     | sizes: {0: 2283742, 1: 2284259, 12: 2284259, 16553: 2315784, 16554: 2315783, 16559: 2324837, 16562: 2325021, 16565: 2325215}
[2026-01-27 04:47:38] 2026-01-27 03:47:02,293 | INFO     | --------------------------------------------------
[2026-01-27 04:47:38] 2026-01-27 03:47:02,293 | INFO     | 
[2026-01-27 04:47:38] 2026-01-27 03:47:02,293 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-01-27 04:47:38] 2026-01-27 03:47:02,950 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 04:47:38] 2026-01-27 03:47:02,950 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 04:47:38] 2026-01-27 03:47:02,950 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 04:47:38] 2026-01-27 03:47:02,950 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 04:47:38] 2026-01-27 03:47:02,950 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 04:47:38] 2026-01-27 03:47:02,951 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 04:47:38] 2026-01-27 03:47:02,951 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 04:47:38] 2026-01-27 03:47:02,951 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 04:47:38] 2026-01-27 03:47:02,951 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 04:47:38] 2026-01-27 03:47:02,951 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 04:47:38] 2026-01-27 03:47:02,951 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 04:47:38] 2026-01-27 03:47:02,951 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 04:47:38] 2026-01-27 03:47:02,951 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 04:47:38] 2026-01-27 03:47:02,952 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 04:47:38] 2026-01-27 03:47:02,952 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 04:47:38] 2026-01-27 03:47:02,952 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 04:47:38] 2026-01-27 03:47:02,952 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 04:47:38] 2026-01-27 03:47:02,952 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 04:47:38] 2026-01-27 03:47:02,952 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 04:47:38] 2026-01-27 03:47:02,952 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 04:47:38] 2026-01-27 03:47:02,952 | INFO     | job 6984063219 has completed (purged errors)
[2026-01-27 04:47:38] 2026-01-27 03:47:02,953 | INFO     | overall cleanup function is called
[2026-01-27 04:47:38] 2026-01-27 03:47:03,961 | INFO     | --- collectZombieJob: --- 10, [5902]
[2026-01-27 04:47:38] 2026-01-27 03:47:03,961 | INFO     | zombie collector waiting for pid 5902
[2026-01-27 04:47:38] 2026-01-27 03:47:03,962 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 04:47:38] 2026-01-27 03:47:03,962 | INFO     | collected zombie processes
[2026-01-27 04:47:38] 2026-01-27 03:47:03,962 | INFO     | will attempt to kill all subprocesses of pid=5902
[2026-01-27 04:47:38] 2026-01-27 03:47:04,042 | INFO     | process IDs to be killed: [5902] (in reverse order)
[2026-01-27 04:47:38] 2026-01-27 03:47:04,901 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 04:47:38] 2026-01-27 03:47:04,901 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 04:47:38] 2026-01-27 03:47:04,903 | INFO     | did not find any defunct processes belonging to 5902
[2026-01-27 04:47:38] 2026-01-27 03:47:04,905 | INFO     | did not find any defunct processes belonging to 5902
[2026-01-27 04:47:38] 2026-01-27 03:47:04,905 | INFO     | ready for new job
[2026-01-27 04:47:38] 2026-01-27 03:47:04,906 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 04:47:38] 2026-01-27 03:47:04,915 | INFO     | **************************************
[2026-01-27 04:47:38] 2026-01-27 03:47:04,915 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 04:47:38] 2026-01-27 03:47:04,915 | INFO     | **************************************
[2026-01-27 04:47:38] 2026-01-27 03:47:04,916 | INFO     | 
[2026-01-27 04:47:38] 2026-01-27 03:47:04,916 | INFO     | pilot is running in a VM
[2026-01-27 04:47:38] 2026-01-27 03:47:04,916 | INFO     | architecture information:
[2026-01-27 04:47:38] 2026-01-27 03:47:04,922 | INFO     | executing command: cat /etc/os-release
[2026-01-27 04:47:38] 2026-01-27 03:47:05,186 | INFO     | cat /etc/os-release:
[2026-01-27 04:47:38] NAME="CentOS Linux"
[2026-01-27 04:47:38] VERSION="7 (Core)"
[2026-01-27 04:47:38] ID="centos"
[2026-01-27 04:47:38] ID_LIKE="rhel fedora"
[2026-01-27 04:47:38] VERSION_ID="7"
[2026-01-27 04:47:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 04:47:38] ANSI_COLOR="0;31"
[2026-01-27 04:47:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 04:47:38] HOME_URL="https://www.centos.org/"
[2026-01-27 04:47:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 04:47:38] 
[2026-01-27 04:47:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 04:47:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 04:47:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 04:47:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 04:47:38] 
[2026-01-27 04:47:38] 2026-01-27 03:47:05,186 | INFO     | **************************************
[2026-01-27 04:47:38] 2026-01-27 03:47:05,689 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-01-27 04:47:38] 2026-01-27 03:47:05,902 | INFO     | sufficient remaining disk space (495785607168 B)
[2026-01-27 04:47:38] 2026-01-27 03:47:05,902 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 04:47:38] 2026-01-27 03:47:05,903 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 04:47:38] 2026-01-27 03:47:05,903 | INFO     | update_server=False
[2026-01-27 04:47:38] 2026-01-27 03:47:05,903 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 04:47:38] 2026-01-27 03:47:05,905 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 04:47:38] 2026-01-27 03:47:06,176 | INFO     | all job control threads have been joined
[2026-01-27 04:47:38] 2026-01-27 03:47:06,328 | INFO     | all data control threads have been joined
[2026-01-27 04:47:38] 2026-01-27 03:47:06,481 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 04:47:38] 2026-01-27 03:47:06,497 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 04:47:38] 2026-01-27 03:47:06,497 | INFO     | aborting loop
[2026-01-27 04:47:38] 2026-01-27 03:47:06,909 | INFO     | [job] retrieve thread has finished
[2026-01-27 04:47:38] 2026-01-27 03:47:07,182 | INFO     | [job] control thread has finished
[2026-01-27 04:47:38] 2026-01-27 03:47:07,248 | INFO     | [data] copytool_in thread has finished
[2026-01-27 04:47:38] 2026-01-27 03:47:07,283 | INFO     | all payload control threads have been joined
[2026-01-27 04:47:38] 2026-01-27 03:47:07,289 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 04:47:38] 2026-01-27 03:47:07,304 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 04:47:38] 2026-01-27 03:47:07,334 | INFO     | [data] control thread has finished
[2026-01-27 04:47:38] 2026-01-27 03:47:07,416 | INFO     | [payload] failed_post thread has finished
[2026-01-27 04:47:38] 2026-01-27 03:47:07,503 | INFO     | [job] job monitor thread has finished
[2026-01-27 04:47:38] 2026-01-27 03:47:07,908 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 04:47:38] 2026-01-27 03:47:08,103 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 04:47:38] 2026-01-27 03:47:08,131 | INFO     | [payload] validate_post thread has finished
[2026-01-27 04:47:38] 2026-01-27 03:47:08,289 | INFO     | [payload] control thread has finished
[2026-01-27 04:47:38] 2026-01-27 03:47:08,310 | INFO     | [job] queue monitor thread has finished
[2026-01-27 04:47:38] 2026-01-27 03:47:08,311 | INFO     | [job] validate thread has finished
[2026-01-27 04:47:38] 2026-01-27 03:47:08,405 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 04:47:38] 2026-01-27 03:47:08,488 | INFO     | [data] copytool_out thread has finished
[2026-01-27 04:47:38] 2026-01-27 03:47:09,913 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 04:47:38] 2026-01-27 03:47:12,546 | INFO     | [monitor] cgroup control has ended
[2026-01-27 04:47:38] 2026-01-27 03:47:12,970 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140243766880064)>', '<ExcThread(monitor, started 140243340609280)>']
[2026-01-27 04:47:38] 2026-01-27 03:47:17,996 | INFO     | all workflow threads have been joined
[2026-01-27 04:47:38] 2026-01-27 03:47:17,996 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 04:47:38] 2026-01-27 03:47:17,997 | INFO     | traces error code: 0
[2026-01-27 04:47:38] 2026-01-27 03:47:17,997 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 04:47:38] 2026-01-27 03:47:34,109 | INFO     | PID=1394 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-27 04:47:38] 2026-01-27 03:47:34,109 | INFO     | .. there are 2 such processes running
[2026-01-27 04:47:38] 2026-01-27 03:47:34,110 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 04:47:38] 2026-01-27 03:47:34,110 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 04:47:38] 2026-01-27 03:47:34,111 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 04:47:38] 2026-01-27 03:47:34,111 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 04:47:38] 2026-01-27 03:47:34,111 | CRITICAL | thread 'MainThread' is not alive
[2026-01-27 04:47:38] 2026-01-27 03:47:34,111 | INFO     | [monitor] control thread has ended
[2026-01-27 04:47:38] 2026-01-27 03:47:34,599 [wrapper] ==== pilot stdout END ====
[2026-01-27 04:47:38] 2026-01-27 03:47:34,678 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 04:47:38] 2026-01-27 03:47:34,735 [wrapper] pilotpid: 1394
[2026-01-27 04:47:38] 2026-01-27 03:47:34,851 [wrapper] Pilot exit status: 0
[2026-01-27 04:47:38] 2026-01-27 03:47:35,364 [wrapper] pandaids: 6984063219
[2026-01-27 04:47:38] 2026-01-27 03:47:36,098 [wrapper] cleanup supervisor_pilot 12212 1395
[2026-01-27 04:47:38] 2026-01-27 03:47:36,198 [wrapper] Test setup, not cleaning
[2026-01-27 04:47:38] 2026-01-27 03:47:36,313 [wrapper] apfmon messages muted
[2026-01-27 04:47:38] 2026-01-27 03:47:36,390 [wrapper] ==== wrapper stdout END ====
[2026-01-27 04:47:38] 2026-01-27 03:47:36,519 [wrapper] ==== wrapper stderr END ====
[2026-01-27 04:47:38]  *** Error codes and diagnostics ***
[2026-01-27 04:47:38]     "exeErrorCode": 0,
[2026-01-27 04:47:38]     "exeErrorDiag": "",
[2026-01-27 04:47:38]     "pilotErrorCode": 0,
[2026-01-27 04:47:38]     "pilotErrorDiag": "",
[2026-01-27 04:47:38]  *** Listing of results directory ***
[2026-01-27 04:47:38] total 677276
[2026-01-27 04:47:38] -rw-r--r--. 1 boinc boinc    584422 Jan 26 08:37 pilot3.tar.gz
[2026-01-27 04:47:38] -rwx------. 1 boinc boinc     36322 Jan 26 08:39 runpilot2-wrapper.sh
[2026-01-27 04:47:38] -rw-r--r--. 1 boinc boinc      5111 Jan 26 08:40 queuedata.json
[2026-01-27 04:47:38] -rw-r--r--. 1 boinc boinc       100 Jan 27 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 04:47:38] -rwxr-xr-x. 1 boinc boinc      7986 Jan 27 00:03 run_atlas
[2026-01-27 04:47:38] -rw-r--r--. 1 boinc boinc       105 Jan 27 00:03 job.xml
[2026-01-27 04:47:38] -rw-r--r--. 2 boinc boinc 496798061 Jan 27 00:03 EVNT.48317949._000014.pool.root.1
[2026-01-27 04:47:38] drwxrwx--x. 2 boinc boinc        68 Jan 27 00:03 shared
[2026-01-27 04:47:38] -rw-r--r--. 2 boinc boinc    597755 Jan 27 00:03 input.tar.gz
[2026-01-27 04:47:38] -rw-r--r--. 1 boinc boinc      6391 Jan 27 00:03 init_data.xml
[2026-01-27 04:47:38] -rw-r--r--. 2 boinc boinc     15845 Jan 27 00:03 start_atlas.sh
[2026-01-27 04:47:38] -rw-r--r--. 1 boinc boinc         0 Jan 27 00:03 boinc_lockfile
[2026-01-27 04:47:38] -rw-r--r--. 1 boinc boinc      2516 Jan 27 00:03 pandaJob.out
[2026-01-27 04:47:38] -rw-------. 1 boinc boinc       415 Jan 27 00:10 workernode_map.json
[2026-01-27 04:47:38] -rw-------. 1 boinc boinc   1006433 Jan 27 00:10 agis_schedconf.cvmfs.json
[2026-01-27 04:47:38] drwx------. 5 boinc boinc      4096 Jan 27 00:10 pilot3
[2026-01-27 04:47:38] -rw-------. 1 boinc boinc 187198177 Jan 27 04:45 HITS.48317952._000679.pool.root.1
[2026-01-27 04:47:38] -rw-r--r--. 1 boinc boinc       532 Jan 27 04:45 boinc_task_state.xml
[2026-01-27 04:47:38] -rw-------. 1 boinc boinc      1011 Jan 27 04:46 memory_monitor_summary.json
[2026-01-27 04:47:38] -rw-------. 1 boinc boinc   1516246 Jan 27 04:46 agis_ddmendpoints.agis.ALL.json
[2026-01-27 04:47:38] -rw-------. 1 boinc boinc    486201 Jan 27 04:46 log.48317952._000679.job.log.tgz.1
[2026-01-27 04:47:38] -rw-------. 1 boinc boinc      6315 Jan 27 04:47 heartbeat.json
[2026-01-27 04:47:38] -rw-r--r--. 1 boinc boinc      8192 Jan 27 04:47 boinc_mmap_file
[2026-01-27 04:47:38] -rw-r--r--. 1 boinc boinc        28 Jan 27 04:47 wrapper_checkpoint.txt
[2026-01-27 04:47:38] -rw-------. 1 boinc boinc        95 Jan 27 04:47 pilot_heartbeat.json
[2026-01-27 04:47:38] -rw-------. 1 boinc boinc       889 Jan 27 04:47 pilotlog.txt
[2026-01-27 04:47:38] -rw-------. 1 boinc boinc   2320802 Jan 27 04:47 log.48317952._000679.job.log.1
[2026-01-27 04:47:38] -rw-------. 1 boinc boinc       357 Jan 27 04:47 output.list
[2026-01-27 04:47:38] -rw-r--r--. 1 boinc boinc       620 Jan 27 04:47 runtime_log
[2026-01-27 04:47:38] -rw-------. 1 boinc boinc   2826240 Jan 27 04:47 result.tar.gz
[2026-01-27 04:47:38] -rw-r--r--. 1 boinc boinc      8816 Jan 27 04:47 runtime_log.err
[2026-01-27 04:47:38] -rw-------. 1 boinc boinc       656 Jan 27 04:47 4XdMDmONW48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPP9KDmZ819Io.diag
[2026-01-27 04:47:38] -rw-r--r--. 1 boinc boinc     20697 Jan 27 04:47 stderr.txt
[2026-01-27 04:47:38] HITS file was successfully produced:
[2026-01-27 04:47:38] -rw-------. 1 boinc boinc 187198177 Jan 27 04:45 shared/HITS.pool.root.1
[2026-01-27 04:47:38]  *** Contents of shared directory: ***
[2026-01-27 04:47:38] total 671328
[2026-01-27 04:47:38] -rw-r--r--. 2 boinc boinc 496798061 Jan 27 00:03 ATLAS.root_0
[2026-01-27 04:47:38] -rw-r--r--. 2 boinc boinc    597755 Jan 27 00:03 input.tar.gz
[2026-01-27 04:47:38] -rw-r--r--. 2 boinc boinc     15845 Jan 27 00:03 start_atlas.sh
[2026-01-27 04:47:38] -rw-------. 1 boinc boinc 187198177 Jan 27 04:45 HITS.pool.root.1
[2026-01-27 04:47:38] -rw-------. 1 boinc boinc   2826240 Jan 27 04:47 result.tar.gz
04:47:39 (29821): run_atlas exited; CPU time 62196.397231
04:47:39 (29821): called boinc_finish(0)

</stderr_txt>
]]>

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