Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:46:14 (27467): wrapper (7.7.26015): starting
06:46:14 (27467): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 06:46:14] Arguments: --nthreads 8
[2026-01-26 06:46:14] Threads: 8
[2026-01-26 06:46:14] Checking for CVMFS
[2026-01-26 06:46:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 06:46:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 06:46:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 06:46:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 06:46:15] 2.11.2.0 7040 205481 145888 155545 3 52 11393568 18432000 1833 130560 0 138456684 99.981 7721343 30387 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 06:46:15] CVMFS is ok
[2026-01-26 06:46:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 06:46:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 06:46:15] Further information can be found at the LHC@home message board.
[2026-01-26 06:46:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 06:46:15] Checking for apptainer binary...
[2026-01-26 06:46:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 06:46:15] Running /usr/bin/apptainer --version
[2026-01-26 06:46:15] apptainer version 1.3.2-1.el7
[2026-01-26 06:46:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 06:46:16] c-206-7.aglt2.org
[2026-01-26 06:46:16] apptainer works
[2026-01-26 06:46:16] Set ATHENA_PROC_NUMBER=8
[2026-01-26 06:46:16] Set ATHENA_CORE_NUMBER=8
[2026-01-26 06:46:16] Starting ATLAS job with PandaID=6983772654
[2026-01-26 06:46:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
08:12:15 (28968): wrapper (7.7.26015): starting
08:12:15 (28968): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 08:12:15] Arguments: --nthreads 8
[2026-01-26 08:12:15] Threads: 8
[2026-01-26 08:12:15] This job has been restarted, cleaning up previous attempt
[2026-01-26 08:12:15] Checking for CVMFS
[2026-01-26 08:12:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 08:12:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 08:12:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 08:12:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 08:12:15] 2.11.2.0 7040 205567 143852 155547 1 11 11412629 18432001 1 130560 0 138510051 99.981 7723121 30387 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 08:12:15] CVMFS is ok
[2026-01-26 08:12:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 08:12:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 08:12:15] Further information can be found at the LHC@home message board.
[2026-01-26 08:12:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 08:12:15] Checking for apptainer binary...
[2026-01-26 08:12:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 08:12:15] Running /usr/bin/apptainer --version
[2026-01-26 08:12:15] apptainer version 1.3.2-1.el7
[2026-01-26 08:12:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 08:12:17] c-206-7.aglt2.org
[2026-01-26 08:12:17] apptainer works
[2026-01-26 08:12:17] Set ATHENA_PROC_NUMBER=8
[2026-01-26 08:12:17] Set ATHENA_CORE_NUMBER=8
[2026-01-26 08:12:17] Starting ATLAS job with PandaID=6983772654
[2026-01-26 08:12:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 11:25:53]  *** The last 200 lines of the pilot log: ***
[2026-01-26 11:25:53] 2026-01-26 16:24:47,619 | INFO     | sum of square deviations: 1931608310.0
[2026-01-26 11:25:53] 2026-01-26 16:24:47,621 | INFO     | sum of deviations: 32832751141.999996
[2026-01-26 11:25:53] 2026-01-26 16:24:47,621 | INFO     | mean x: 1769438752.5
[2026-01-26 11:25:53] 2026-01-26 16:24:47,621 | INFO     | mean y: 2467347.0434782607
[2026-01-26 11:25:53] 2026-01-26 16:24:47,621 | INFO     | intersect: -30073786684.93644
[2026-01-26 11:25:53] 2026-01-26 16:24:47,622 | INFO     | chi2: 1.3342794611249538
[2026-01-26 11:25:53] 2026-01-26 16:24:47,622 | INFO     | current chi2=1.3342794611249538 (change=-0.01046092683588069 %)
[2026-01-26 11:25:53] 2026-01-26 16:24:47,622 | INFO     | right removable region: 183
[2026-01-26 11:25:53] 2026-01-26 16:24:47,623 | INFO     | sum of square deviations: 1931608310.0
[2026-01-26 11:25:53] 2026-01-26 16:24:47,624 | INFO     | sum of deviations: 6765225678.999999
[2026-01-26 11:25:53] 2026-01-26 16:24:47,624 | INFO     | mean x: 1769439057.5
[2026-01-26 11:25:53] 2026-01-26 16:24:47,625 | INFO     | mean y: 2493436.8586956523
[2026-01-26 11:25:53] 2026-01-26 16:24:47,625 | INFO     | intersect: -6194753948.779522
[2026-01-26 11:25:53] 2026-01-26 16:24:47,625 | INFO     | chi2: 0.04845248588915162
[2026-01-26 11:25:53] 2026-01-26 16:24:47,625 | INFO     | current chi2=0.04845248588915162 (change=96.36826048214854 %)
[2026-01-26 11:25:53] 2026-01-26 16:24:47,626 | INFO     | sum of square deviations: 1778377530.0
[2026-01-26 11:25:53] 2026-01-26 16:24:47,627 | INFO     | sum of deviations: 1640184653.0
[2026-01-26 11:25:53] 2026-01-26 16:24:47,628 | INFO     | mean x: 1769439210.0
[2026-01-26 11:25:53] 2026-01-26 16:24:47,628 | INFO     | mean y: 2498475.7541899444
[2026-01-26 11:25:53] 2026-01-26 16:24:47,628 | INFO     | intersect: -1629442429.7623367
[2026-01-26 11:25:53] 2026-01-26 16:24:47,628 | INFO     | chi2: 0.001767810569321738
[2026-01-26 11:25:53] 2026-01-26 16:24:47,629 | INFO     | current chi2=0.001767810569321738 (change=96.35145537554855 %)
[2026-01-26 11:25:53] 2026-01-26 16:24:47,629 | INFO     | sum of square deviations: 1633472487.5
[2026-01-26 11:25:53] 2026-01-26 16:24:47,630 | INFO     | sum of deviations: 730876563.0000001
[2026-01-26 11:25:53] 2026-01-26 16:24:47,631 | INFO     | mean x: 1769439362.5
[2026-01-26 11:25:53] 2026-01-26 16:24:47,631 | INFO     | mean y: 2499429.9655172415
[2026-01-26 11:25:53] 2026-01-26 16:24:47,631 | INFO     | intersect: -789213788.1004902
[2026-01-26 11:25:53] 2026-01-26 16:24:47,631 | INFO     | chi2: 0.0010027471141958282
[2026-01-26 11:25:53] 2026-01-26 16:24:47,632 | INFO     | current chi2=0.0010027471141958282 (change=43.27745678200377 %)
[2026-01-26 11:25:53] 2026-01-26 16:24:47,632 | INFO     | sum of square deviations: 1496660620.0
[2026-01-26 11:25:53] 2026-01-26 16:24:47,633 | INFO     | sum of deviations: 204122530.9999999
[2026-01-26 11:25:53] 2026-01-26 16:24:47,634 | INFO     | mean x: 1769439515.0
[2026-01-26 11:25:53] 2026-01-26 16:24:47,634 | INFO     | mean y: 2500015.698224852
[2026-01-26 11:25:53] 2026-01-26 16:24:47,634 | INFO     | intersect: -238825550.984496
[2026-01-26 11:25:53] 2026-01-26 16:24:47,634 | INFO     | chi2: 0.0007147863874583388
[2026-01-26 11:25:53] 2026-01-26 16:24:47,635 | INFO     | current chi2=0.0007147863874583388 (change=28.717183291863662 %)
[2026-01-26 11:25:53] 2026-01-26 16:24:47,635 | INFO     | sum of square deviations: 1367709365.0
[2026-01-26 11:25:53] 2026-01-26 16:24:47,636 | INFO     | sum of deviations: -122163510.49999985
[2026-01-26 11:25:53] 2026-01-26 16:24:47,637 | INFO     | mean x: 1769439667.5
[2026-01-26 11:25:53] 2026-01-26 16:24:47,637 | INFO     | mean y: 2500400.4695121953
[2026-01-26 11:25:53] 2026-01-26 16:24:47,637 | INFO     | intersect: 160546376.4139355
[2026-01-26 11:25:53] 2026-01-26 16:24:47,638 | INFO     | chi2: 0.0005801386221597904
[2026-01-26 11:25:53] 2026-01-26 16:24:47,638 | INFO     | current chi2=0.0005801386221597904 (change=18.83748315036236 %)
[2026-01-26 11:25:53] 2026-01-26 16:24:47,638 | INFO     | left removable region: 50
[2026-01-26 11:25:53] 2026-01-26 16:24:47,638 | INFO     | sum of square deviations: 729472282.0
[2026-01-26 11:25:53] 2026-01-26 16:24:47,639 | INFO     | sum of deviations: 437544032.99999994
[2026-01-26 11:25:53] 2026-01-26 16:24:47,639 | INFO     | mean x: 1769440247.0
[2026-01-26 11:25:53] 2026-01-26 16:24:47,640 | INFO     | mean y: 2499401.3157894737
[2026-01-26 11:25:53] 2026-01-26 16:24:47,640 | INFO     | intersect: -1058826766.8317428
[2026-01-26 11:25:53] 2026-01-26 16:24:47,640 | INFO     | chi2: 0.00039331387796799264
[2026-01-26 11:25:53] 2026-01-26 16:24:47,641 | INFO     | current memory leak: 0.60 B/s (using 133 data points, chi2=0.00)
[2026-01-26 11:25:53] 2026-01-26 16:24:47,641 | INFO     | could have reported an average CPU frequency of 2439 MHz (10 samples)
[2026-01-26 11:25:53] 2026-01-26 16:24:47,641 | INFO     | ..............................
[2026-01-26 11:25:53] 2026-01-26 16:24:47,641 | INFO     | . Timing measurements:
[2026-01-26 11:25:53] 2026-01-26 16:24:47,642 | INFO     | . get job = 0 s
[2026-01-26 11:25:53] 2026-01-26 16:24:47,642 | INFO     | . initial setup = 1 s
[2026-01-26 11:25:53] 2026-01-26 16:24:47,642 | INFO     | . payload setup = 6 s
[2026-01-26 11:25:53] 2026-01-26 16:24:47,642 | INFO     | . stage-in = 0 s
[2026-01-26 11:25:53] 2026-01-26 16:24:47,642 | INFO     | . payload execution = 11509 s
[2026-01-26 11:25:53] 2026-01-26 16:24:47,642 | INFO     | . stage-out = 2 s
[2026-01-26 11:25:53] 2026-01-26 16:24:47,643 | INFO     | . log creation = 0 s
[2026-01-26 11:25:53] 2026-01-26 16:24:47,643 | INFO     | ..............................
[2026-01-26 11:25:53] 2026-01-26 16:24:47,805 | INFO     | time since job start (11539s) is within the limit (349056.0s)
[2026-01-26 11:25:53] 2026-01-26 16:24:47,843 | INFO     | 
[2026-01-26 11:25:53] 2026-01-26 16:24:47,843 | INFO     | job summary report
[2026-01-26 11:25:53] 2026-01-26 16:24:47,844 | INFO     | --------------------------------------------------
[2026-01-26 11:25:53] 2026-01-26 16:24:47,844 | INFO     | PanDA job id: 6983772654
[2026-01-26 11:25:53] 2026-01-26 16:24:47,844 | INFO     | task id: 48317872
[2026-01-26 11:25:53] 2026-01-26 16:24:47,844 | INFO     | errors: (none)
[2026-01-26 11:25:53] 2026-01-26 16:24:47,844 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 11:25:53] 2026-01-26 16:24:47,844 | INFO     | pilot state: finished 
[2026-01-26 11:25:53] 2026-01-26 16:24:47,845 | INFO     | transexitcode: 0
[2026-01-26 11:25:53] 2026-01-26 16:24:47,845 | INFO     | exeerrorcode: 0
[2026-01-26 11:25:53] 2026-01-26 16:24:47,845 | INFO     | exeerrordiag: 
[2026-01-26 11:25:53] 2026-01-26 16:24:47,845 | INFO     | exitcode: 0
[2026-01-26 11:25:53] 2026-01-26 16:24:47,845 | INFO     | exitmsg: OK
[2026-01-26 11:25:53] 2026-01-26 16:24:47,845 | INFO     | cpuconsumptiontime: 87338 s
[2026-01-26 11:25:53] 2026-01-26 16:24:47,846 | INFO     | nevents: 400
[2026-01-26 11:25:53] 2026-01-26 16:24:47,846 | INFO     | neventsw: 0
[2026-01-26 11:25:53] 2026-01-26 16:24:47,846 | INFO     | pid: 14801
[2026-01-26 11:25:53] 2026-01-26 16:24:47,846 | INFO     | pgrp: 14801
[2026-01-26 11:25:53] 2026-01-26 16:24:47,846 | INFO     | corecount: 8
[2026-01-26 11:25:53] 2026-01-26 16:24:47,846 | INFO     | event service: False
[2026-01-26 11:25:53] 2026-01-26 16:24:47,847 | INFO     | sizes: {0: 2283799, 1: 2284260, 11: 2284260, 11519: 2313513, 11522: 2322511, 11525: 2322567, 11528: 2322889}
[2026-01-26 11:25:53] 2026-01-26 16:24:47,847 | INFO     | --------------------------------------------------
[2026-01-26 11:25:53] 2026-01-26 16:24:47,847 | INFO     | 
[2026-01-26 11:25:53] 2026-01-26 16:24:47,847 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-26 11:25:53] 2026-01-26 16:24:47,869 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 11:25:53] 2026-01-26 16:24:47,869 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 11:25:53] 2026-01-26 16:24:47,869 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 11:25:53] 2026-01-26 16:24:47,869 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 11:25:53] 2026-01-26 16:24:47,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 11:25:53] 2026-01-26 16:24:47,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 11:25:53] 2026-01-26 16:24:47,870 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 11:25:53] 2026-01-26 16:24:47,870 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 11:25:53] 2026-01-26 16:24:47,870 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 11:25:53] 2026-01-26 16:24:47,871 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 11:25:53] 2026-01-26 16:24:47,871 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 11:25:53] 2026-01-26 16:24:47,871 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 11:25:53] 2026-01-26 16:24:47,871 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 11:25:53] 2026-01-26 16:24:47,871 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 11:25:53] 2026-01-26 16:24:47,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 11:25:53] 2026-01-26 16:24:47,872 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 11:25:53] 2026-01-26 16:24:47,872 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 11:25:53] 2026-01-26 16:24:47,872 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 11:25:53] 2026-01-26 16:24:47,872 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 11:25:53] 2026-01-26 16:24:47,872 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 11:25:53] 2026-01-26 16:24:47,873 | INFO     | job 6983772654 has completed (purged errors)
[2026-01-26 11:25:53] 2026-01-26 16:24:47,873 | INFO     | overall cleanup function is called
[2026-01-26 11:25:53] 2026-01-26 16:24:48,881 | INFO     | --- collectZombieJob: --- 10, [14801]
[2026-01-26 11:25:53] 2026-01-26 16:24:48,882 | INFO     | zombie collector waiting for pid 14801
[2026-01-26 11:25:53] 2026-01-26 16:24:48,882 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 11:25:53] 2026-01-26 16:24:48,882 | INFO     | collected zombie processes
[2026-01-26 11:25:53] 2026-01-26 16:24:48,883 | INFO     | will attempt to kill all subprocesses of pid=14801
[2026-01-26 11:25:53] 2026-01-26 16:24:49,094 | INFO     | PID=7756 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 11:25:53] 2026-01-26 16:24:49,094 | INFO     | .. there are 3 such processes running
[2026-01-26 11:25:53] 2026-01-26 16:24:49,152 | INFO     | process IDs to be killed: [14801] (in reverse order)
[2026-01-26 11:25:53] 2026-01-26 16:24:49,208 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 11:25:53] 2026-01-26 16:24:49,209 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 11:25:53] 2026-01-26 16:24:49,211 | INFO     | did not find any defunct processes belonging to 14801
[2026-01-26 11:25:53] 2026-01-26 16:24:49,213 | INFO     | did not find any defunct processes belonging to 14801
[2026-01-26 11:25:53] 2026-01-26 16:24:49,214 | INFO     | ready for new job
[2026-01-26 11:25:53] 2026-01-26 16:24:49,214 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 11:25:53] 2026-01-26 16:24:49,215 | INFO     | **************************************
[2026-01-26 11:25:53] 2026-01-26 16:24:49,215 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 11:25:53] 2026-01-26 16:24:49,215 | INFO     | **************************************
[2026-01-26 11:25:53] 2026-01-26 16:24:49,215 | INFO     | 
[2026-01-26 11:25:53] 2026-01-26 16:24:49,216 | INFO     | architecture information:
[2026-01-26 11:25:53] 2026-01-26 16:24:49,217 | INFO     | executing command: cat /etc/os-release
[2026-01-26 11:25:53] 2026-01-26 16:24:49,226 | INFO     | cat /etc/os-release:
[2026-01-26 11:25:53] NAME="CentOS Linux"
[2026-01-26 11:25:53] VERSION="7 (Core)"
[2026-01-26 11:25:53] ID="centos"
[2026-01-26 11:25:53] ID_LIKE="rhel fedora"
[2026-01-26 11:25:53] VERSION_ID="7"
[2026-01-26 11:25:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 11:25:53] ANSI_COLOR="0;31"
[2026-01-26 11:25:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 11:25:53] HOME_URL="https://www.centos.org/"
[2026-01-26 11:25:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 11:25:53] 
[2026-01-26 11:25:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 11:25:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 11:25:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 11:25:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 11:25:53] 
[2026-01-26 11:25:53] 2026-01-26 16:24:49,226 | INFO     | **************************************
[2026-01-26 11:25:53] 2026-01-26 16:24:49,729 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-26 11:25:53] 2026-01-26 16:24:49,742 | INFO     | sufficient remaining disk space (26418872320 B)
[2026-01-26 11:25:53] 2026-01-26 16:24:49,743 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 11:25:53] 2026-01-26 16:24:49,743 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 11:25:53] 2026-01-26 16:24:49,743 | INFO     | update_server=False
[2026-01-26 11:25:53] 2026-01-26 16:24:49,743 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 11:25:53] 2026-01-26 16:24:49,744 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 11:25:53] 2026-01-26 16:24:49,744 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-26 11:25:53] 2026-01-26 16:24:49,744 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 11:25:53] 2026-01-26 16:24:49,745 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 11:25:53] 2026-01-26 16:24:49,745 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 11:25:53] 2026-01-26 16:24:49,744 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 11:25:53] 2026-01-26 16:24:50,054 | INFO     | all payload control threads have been joined
[2026-01-26 11:25:53] 2026-01-26 16:24:50,102 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 11:25:53] 2026-01-26 16:24:50,103 | INFO     | aborting loop
[2026-01-26 11:25:53] 2026-01-26 16:24:50,161 | INFO     | all data control threads have been joined
[2026-01-26 11:25:53] 2026-01-26 16:24:50,749 | INFO     | [job] retrieve thread has finished
[2026-01-26 11:25:53] 2026-01-26 16:24:50,750 | INFO     | [job] queue monitor thread has finished
[2026-01-26 11:25:53] 2026-01-26 16:24:50,949 | INFO     | [payload] failed_post thread has finished
[2026-01-26 11:25:53] 2026-01-26 16:24:51,076 | INFO     | [payload] control thread has finished
[2026-01-26 11:25:53] 2026-01-26 16:24:51,108 | INFO     | [job] job monitor thread has finished
[2026-01-26 11:25:53] 2026-01-26 16:24:51,166 | INFO     | [data] control thread has finished
[2026-01-26 11:25:53] 2026-01-26 16:24:51,166 | INFO     | all job control threads have been joined
[2026-01-26 11:25:53] 2026-01-26 16:24:51,303 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 11:25:53] 2026-01-26 16:24:51,612 | INFO     | [payload] validate_post thread has finished
[2026-01-26 11:25:53] 2026-01-26 16:24:51,681 | INFO     | [data] copytool_in thread has finished
[2026-01-26 11:25:53] 2026-01-26 16:24:51,755 | INFO     | [data] copytool_out thread has finished
[2026-01-26 11:25:53] 2026-01-26 16:24:52,080 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 11:25:53] 2026-01-26 16:24:52,136 | INFO     | [job] validate thread has finished
[2026-01-26 11:25:53] 2026-01-26 16:24:52,170 | INFO     | [job] control thread has finished
[2026-01-26 11:25:53] 2026-01-26 16:24:52,216 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 11:25:53] 2026-01-26 16:24:52,222 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 11:25:53] 2026-01-26 16:24:55,312 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 11:25:53] 2026-01-26 16:24:59,859 | INFO     | job.realtimelogging is not enabled
[2026-01-26 11:25:53] 2026-01-26 16:25:00,864 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 11:25:53] 2026-01-26 16:25:47,362 | INFO     | [monitor] cgroup control has ended
[2026-01-26 11:25:53] 2026-01-26 16:25:48,571 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140214059079488)>', '<ExcThread(monitor, started 140212957079296)>']
[2026-01-26 11:25:53] 2026-01-26 16:25:49,035 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 11:25:53] 2026-01-26 16:25:49,036 | INFO     | [monitor] control thread has ended
[2026-01-26 11:25:53] 2026-01-26 16:25:53,583 | INFO     | all workflow threads have been joined
[2026-01-26 11:25:53] 2026-01-26 16:25:53,584 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 11:25:53] 2026-01-26 16:25:53,584 | INFO     | traces error code: 0
[2026-01-26 11:25:53] 2026-01-26 16:25:53,584 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 11:25:53] 2026-01-26 16:25:53,705 [wrapper] ==== pilot stdout END ====
[2026-01-26 11:25:53] 2026-01-26 16:25:53,707 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 11:25:53] 2026-01-26 16:25:53,710 [wrapper] pilotpid: 7756
[2026-01-26 11:25:53] 2026-01-26 16:25:53,712 [wrapper] Pilot exit status: 0
[2026-01-26 11:25:53] 2026-01-26 16:25:53,727 [wrapper] pandaids: 6983772654 6983772654
[2026-01-26 11:25:53] 2026-01-26 16:25:53,761 [wrapper] cleanup supervisor_pilot  7411 7759
[2026-01-26 11:25:53] 2026-01-26 16:25:53,763 [wrapper] Test setup, not cleaning
[2026-01-26 11:25:53] 2026-01-26 16:25:53,771 [wrapper] apfmon messages muted
[2026-01-26 11:25:53] 2026-01-26 16:25:53,773 [wrapper] ==== wrapper stdout END ====
[2026-01-26 11:25:53] 2026-01-26 16:25:53,775 [wrapper] ==== wrapper stderr END ====
[2026-01-26 11:25:53]  *** Error codes and diagnostics ***
[2026-01-26 11:25:53]     "exeErrorCode": 0,
[2026-01-26 11:25:53]     "exeErrorDiag": "",
[2026-01-26 11:25:53]     "pilotErrorCode": 0,
[2026-01-26 11:25:53]     "pilotErrorDiag": "",
[2026-01-26 11:25:53]  *** Listing of results directory ***
[2026-01-26 11:25:53] total 1166832
[2026-01-26 11:25:53] drwx------ 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-01-26 11:25:53] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 22:16 pilot3.tar.gz
[2026-01-26 11:25:53] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 22:17 queuedata.json
[2026-01-26 11:25:53] -rwx------ 1 boincer umatlas     36322 Jan 25 22:17 runpilot2-wrapper.sh
[2026-01-26 11:25:53] -rw-r--r-- 1 boincer umatlas       100 Jan 26 06:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 11:25:53] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 06:46 run_atlas
[2026-01-26 11:25:53] -rw-r--r-- 1 boincer umatlas       105 Jan 26 06:46 job.xml
[2026-01-26 11:25:53] -rw-r--r-- 3 boincer umatlas 501471148 Jan 26 06:46 EVNT.48317869._000038.pool.root.1
[2026-01-26 11:25:53] -rw-r--r-- 3 boincer umatlas 501471148 Jan 26 06:46 ATLAS.root_0
[2026-01-26 11:25:53] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 06:46 start_atlas.sh
[2026-01-26 11:25:53] drwxrwx--x 2 boincer umatlas      4096 Jan 26 06:46 shared
[2026-01-26 11:25:53] -rw-r--r-- 2 boincer umatlas    597757 Jan 26 06:46 input.tar.gz
[2026-01-26 11:25:53] -rw-r--r-- 1 boincer umatlas         0 Jan 26 06:46 boinc_lockfile
[2026-01-26 11:25:53] -rw-r--r-- 1 boincer umatlas      2514 Jan 26 08:12 pandaJob.out
[2026-01-26 11:25:53] -rw------- 1 boincer umatlas        57 Jan 26 08:12 setup.sh.local
[2026-01-26 11:25:53] -rw------- 1 boincer umatlas   1002189 Jan 26 08:12 agis_schedconf.cvmfs.json
[2026-01-26 11:25:53] -rw------- 1 boincer umatlas       434 Jan 26 08:12 workernode_map.json
[2026-01-26 11:25:53] -rw-r--r-- 1 boincer umatlas      5952 Jan 26 11:22 init_data.xml
[2026-01-26 11:25:53] -rw------- 1 boincer umatlas 183759951 Jan 26 11:24 HITS.48317872._001909.pool.root.1
[2026-01-26 11:25:53] -rw-r--r-- 1 boincer umatlas       532 Jan 26 11:24 boinc_task_state.xml
[2026-01-26 11:25:53] -rw------- 1 boincer umatlas      1046 Jan 26 11:24 memory_monitor_summary.json
[2026-01-26 11:25:53] -rw------- 1 boincer umatlas   1516246 Jan 26 11:24 agis_ddmendpoints.agis.ALL.json
[2026-01-26 11:25:53] -rw------- 1 boincer umatlas    464706 Jan 26 11:24 log.48317872._001909.job.log.tgz.1
[2026-01-26 11:25:53] -rw------- 1 boincer umatlas        96 Jan 26 11:24 pilot_heartbeat.json
[2026-01-26 11:25:53] -rw------- 1 boincer umatlas      6403 Jan 26 11:24 heartbeat.json
[2026-01-26 11:25:53] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 11:25 boinc_mmap_file
[2026-01-26 11:25:53] -rw-r--r-- 1 boincer umatlas        29 Jan 26 11:25 wrapper_checkpoint.txt
[2026-01-26 11:25:53] -rw------- 1 boincer umatlas      4620 Jan 26 11:25 pilotlog.txt
[2026-01-26 11:25:53] -rw------- 1 boincer umatlas   1627055 Jan 26 11:25 log.48317872._001909.job.log.1
[2026-01-26 11:25:53] -rw------- 1 boincer umatlas       357 Jan 26 11:25 output.list
[2026-01-26 11:25:53] -rw-r--r-- 1 boincer umatlas       620 Jan 26 11:25 runtime_log
[2026-01-26 11:25:53] -rw------- 1 boincer umatlas   2109440 Jan 26 11:25 result.tar.gz
[2026-01-26 11:25:53] -rw-r--r-- 1 boincer umatlas      9422 Jan 26 11:25 runtime_log.err
[2026-01-26 11:25:53] -rw------- 1 boincer umatlas       785 Jan 26 11:25 nyjKDmxHS48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwt8KDmbdGmIo.diag
[2026-01-26 11:25:53] -rw-r--r-- 1 boincer umatlas     23150 Jan 26 11:25 stderr.txt
[2026-01-26 11:25:53] HITS file was successfully produced:
[2026-01-26 11:25:53] -rw------- 1 boincer umatlas 183759951 Jan 26 11:24 shared/HITS.pool.root.1
[2026-01-26 11:25:53]  *** Contents of shared directory: ***
[2026-01-26 11:25:53] total 671844
[2026-01-26 11:25:53] -rw-r--r-- 3 boincer umatlas 501471148 Jan 26 06:46 ATLAS.root_0
[2026-01-26 11:25:53] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 06:46 start_atlas.sh
[2026-01-26 11:25:53] -rw-r--r-- 2 boincer umatlas    597757 Jan 26 06:46 input.tar.gz
[2026-01-26 11:25:53] -rw------- 1 boincer umatlas 183759951 Jan 26 11:24 HITS.pool.root.1
[2026-01-26 11:25:53] -rw------- 1 boincer umatlas   2109440 Jan 26 11:25 result.tar.gz
11:25:55 (28968): run_atlas exited; CPU time 87514.215666
11:25:55 (28968): called boinc_finish(0)

</stderr_txt>
]]>

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