Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:17:03 (756450): wrapper (7.7.26015): starting
03:17:03 (756450): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 03:17:03] Arguments: --nthreads 4
[2026-01-27 03:17:03] Threads: 4
[2026-01-27 03:17:03] Checking for CVMFS
[2026-01-27 03:17:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 03:17:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 03:17:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 03:17:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 03:17:03] 2.9.2.0 4135 3322 95872 155569 2 49 29339629 36864001 0 130560 0 1712975 99.987 126911 3913 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-27 03:17:03] CVMFS is ok
[2026-01-27 03:17:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 03:17:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 03:17:03] Further information can be found at the LHC@home message board.
[2026-01-27 03:17:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 03:17:03] Checking for apptainer binary...
[2026-01-27 03:17:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 03:17:03] Running /usr/bin/apptainer --version
[2026-01-27 03:17:03] apptainer version 1.4.1-1.1
[2026-01-27 03:17:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 03:17:03] atlasA237
[2026-01-27 03:17:03] apptainer works
[2026-01-27 03:17:03] Set ATHENA_PROC_NUMBER=4
[2026-01-27 03:17:03] Set ATHENA_CORE_NUMBER=4
[2026-01-27 03:17:03] Starting ATLAS job with PandaID=6984063040
[2026-01-27 03:17:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 04:28:27]  *** The last 200 lines of the pilot log: ***
[2026-01-27 04:28:27] 2026-01-27 03:27:58,378 | INFO     | [job] validate thread has finished
[2026-01-27 04:28:27] 2026-01-27 03:27:58,385 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 04:28:27] 2026-01-27 03:27:58,527 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 04:28:27] 2026-01-27 03:27:58,599 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 04:28:27] 2026-01-27 03:27:58,653 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 04:28:27] 2026-01-27 03:27:58,721 | INFO     | [payload] validate_post thread has finished
[2026-01-27 04:28:27] 2026-01-27 03:27:58,748 | INFO     | [data] copytool_in thread has finished
[2026-01-27 04:28:27] 2026-01-27 03:27:58,994 | INFO     | [data] copytool_out thread has finished
[2026-01-27 04:28:27] 2026-01-27 03:27:59,326 | WARNING  | process 765153 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 04:28:27] 2026-01-27 03:27:59,376 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 04:28:27] 2026-01-27 03:27:59,438 | INFO     | number of running child processes to parent process 765153: 1
[2026-01-27 04:28:27] 2026-01-27 03:27:59,438 | INFO     | maximum number of monitored processes: 6
[2026-01-27 04:28:27] 2026-01-27 03:27:59,438 | INFO     | aborting job monitoring since job object (job id=6984063040) has expired
[2026-01-27 04:28:27] 2026-01-27 03:27:59,438 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 04:28:27] 2026-01-27 03:27:59,438 | INFO     | will abort loop
[2026-01-27 04:28:27] 2026-01-27 03:28:00,444 | INFO     | [job] job monitor thread has finished
[2026-01-27 04:28:27] 2026-01-27 03:28:00,800 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 04:28:27] 2026-01-27 03:28:21,070 | INFO     | [monitor] cgroup control has ended
[2026-01-27 04:28:27] 2026-01-27 03:28:22,544 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140343724742464)>', '<ExcThread(monitor, started 140342334576384)>']
[2026-01-27 04:28:27] 2026-01-27 03:28:27,242 | INFO     | PID=760619 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 04:28:27] 2026-01-27 03:28:27,242 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 04:28:27] 2026-01-27 03:28:27,242 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 04:28:27] 2026-01-27 03:28:27,242 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 04:28:27] 2026-01-27 03:28:27,242 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 04:28:27] 2026-01-27 03:28:27,242 | INFO     | [monitor] control thread has ended
[2026-01-27 04:28:27] 2026-01-27 03:28:27,570 | INFO     | all workflow threads have been joined
[2026-01-27 04:28:27] 2026-01-27 03:28:27,570 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 04:28:27] 2026-01-27 03:28:27,570 | INFO     | traces error code: 0
[2026-01-27 04:28:27] 2026-01-27 03:28:27,571 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 04:28:27] 2026-01-27 03:28:27,641 [wrapper] ==== pilot stdout END ====
[2026-01-27 04:28:27] 2026-01-27 03:28:27,645 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 04:28:27] 2026-01-27 03:28:27,649 [wrapper] pilotpid: 760619
[2026-01-27 04:28:27] 2026-01-27 03:28:27,653 [wrapper] Pilot exit status: 0
[2026-01-27 04:28:27] 2026-01-27 03:28:27,663 [wrapper] pandaids: 6984063040
[2026-01-27 04:28:27] 2026-01-27 03:28:27,689 [wrapper] cleanup supervisor_pilot  774705 760620
[2026-01-27 04:28:27] 2026-01-27 03:28:27,693 [wrapper] Test setup, not cleaning
[2026-01-27 04:28:27] 2026-01-27 03:28:27,697 [wrapper] apfmon messages muted
[2026-01-27 04:28:27] 2026-01-27 03:28:27,701 [wrapper] ==== wrapper stdout END ====
[2026-01-27 04:28:27] 2026-01-27 03:28:27,705 [wrapper] ==== wrapper stderr END ====
[2026-01-27 04:28:27]  *** Error codes and diagnostics ***
[2026-01-27 04:28:27]     "exeErrorCode": 0,
[2026-01-27 04:28:27]     "exeErrorDiag": "",
[2026-01-27 04:28:27]     "pilotErrorCode": 0,
[2026-01-27 04:28:27]     "pilotErrorDiag": "",
[2026-01-27 04:28:27]  *** Listing of results directory ***
[2026-01-27 04:28:27] total 674344
[2026-01-27 04:28:27] -rw-r--r-- 1 boinc boinc    584422 Jan 26 08:37 pilot3.tar.gz
[2026-01-27 04:28:27] -rw-r--r-- 1 boinc boinc      5111 Jan 26 08:38 queuedata.json
[2026-01-27 04:28:27] -rwx------ 1 boinc boinc     36322 Jan 26 08:39 runpilot2-wrapper.sh
[2026-01-27 04:28:27] -rw-r--r-- 1 boinc boinc       100 Jan 27 03:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 04:28:27] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 03:17 run_atlas
[2026-01-27 04:28:27] -rw-r--r-- 1 boinc boinc       105 Jan 27 03:17 job.xml
[2026-01-27 04:28:27] -rw-r--r-- 2 boinc boinc 500107525 Jan 27 03:17 EVNT.48317869._000067.pool.root.1
[2026-01-27 04:28:27] drwxrwx--x 2 boinc boinc      4096 Jan 27 03:17 shared
[2026-01-27 04:28:27] -rw-r--r-- 2 boinc boinc    597753 Jan 27 03:17 input.tar.gz
[2026-01-27 04:28:27] -rw-r--r-- 2 boinc boinc     15845 Jan 27 03:17 start_atlas.sh
[2026-01-27 04:28:27] -rw-r--r-- 1 boinc boinc         0 Jan 27 03:17 boinc_setup_complete
[2026-01-27 04:28:27] -rw-r--r-- 1 boinc boinc      6371 Jan 27 03:17 init_data.xml
[2026-01-27 04:28:27] -rw-r--r-- 1 boinc boinc         0 Jan 27 03:17 boinc_lockfile
[2026-01-27 04:28:27] -rw-r--r-- 1 boinc boinc      2515 Jan 27 03:17 pandaJob.out
[2026-01-27 04:28:27] -rw------- 1 boinc boinc   1006425 Jan 27 03:17 agis_schedconf.cvmfs.json
[2026-01-27 04:28:27] -rw------- 1 boinc boinc   1516246 Jan 27 03:17 agis_ddmendpoints.agis.ALL.json
[2026-01-27 04:28:27] -rw------- 1 boinc boinc       430 Jan 27 03:17 workernode_map.json
[2026-01-27 04:28:27] drwx------ 5 boinc boinc      4096 Jan 27 03:17 pilot3
[2026-01-27 04:28:27] -rw-r--r-- 1 boinc boinc       531 Jan 27 04:27 boinc_task_state.xml
[2026-01-27 04:28:27] -rw------- 1 boinc boinc 184681675 Jan 27 04:27 HITS.48317872._003343.pool.root.1
[2026-01-27 04:28:27] -rw------- 1 boinc boinc        95 Jan 27 04:27 pilot_heartbeat.json
[2026-01-27 04:28:27] -rw------- 1 boinc boinc      1022 Jan 27 04:27 memory_monitor_summary.json
[2026-01-27 04:28:27] -rw------- 1 boinc boinc    279542 Jan 27 04:27 log.48317872._003343.job.log.tgz.1
[2026-01-27 04:28:27] -rw------- 1 boinc boinc      6331 Jan 27 04:27 heartbeat.json
[2026-01-27 04:28:27] -rw-r--r-- 1 boinc boinc      8192 Jan 27 04:28 boinc_mmap_file
[2026-01-27 04:28:27] -rw-r--r-- 1 boinc boinc        27 Jan 27 04:28 wrapper_checkpoint.txt
[2026-01-27 04:28:27] -rw------- 1 boinc boinc      5341 Jan 27 04:28 pilotlog.txt
[2026-01-27 04:28:27] -rw------- 1 boinc boinc    626922 Jan 27 04:28 log.48317872._003343.job.log.1
[2026-01-27 04:28:27] -rw------- 1 boinc boinc       357 Jan 27 04:28 output.list
[2026-01-27 04:28:27] -rw-r--r-- 1 boinc boinc       620 Jan 27 04:28 runtime_log
[2026-01-27 04:28:27] -rw------- 1 boinc boinc    921600 Jan 27 04:28 result.tar.gz
[2026-01-27 04:28:27] -rw-r--r-- 1 boinc boinc      8911 Jan 27 04:28 runtime_log.err
[2026-01-27 04:28:27] -rw------- 1 boinc boinc       660 Jan 27 04:28 1gZLDmrMW48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsn2KDmxMgC3m.diag
[2026-01-27 04:28:27] -rw-r--r-- 1 boinc boinc      6549 Jan 27 04:28 stderr.txt
[2026-01-27 04:28:27] HITS file was successfully produced:
[2026-01-27 04:28:27] -rw------- 1 boinc boinc 184681675 Jan 27 04:27 shared/HITS.pool.root.1
[2026-01-27 04:28:27]  *** Contents of shared directory: ***
[2026-01-27 04:28:27] total 670252
[2026-01-27 04:28:27] -rw-r--r-- 2 boinc boinc 500107525 Jan 27 03:17 ATLAS.root_0
[2026-01-27 04:28:27] -rw-r--r-- 2 boinc boinc    597753 Jan 27 03:17 input.tar.gz
[2026-01-27 04:28:27] -rw-r--r-- 2 boinc boinc     15845 Jan 27 03:17 start_atlas.sh
[2026-01-27 04:28:27] -rw------- 1 boinc boinc 184681675 Jan 27 04:27 HITS.pool.root.1
[2026-01-27 04:28:27] -rw------- 1 boinc boinc    921600 Jan 27 04:28 result.tar.gz
04:28:29 (756450): run_atlas exited; CPU time 15978.832150
04:28:29 (756450): called boinc_finish(0)

</stderr_txt>
]]>

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