Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
12:19:43 (633384): wrapper (7.7.26015): starting
12:19:43 (633384): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 12:19:43] Arguments: --nthreads 4
[2026-01-26 12:19:43] Threads: 4
[2026-01-26 12:19:43] Checking for CVMFS
[2026-01-26 12:19:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 12:19:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 12:19:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 12:19:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 12:19:45] 2.13.1.0 633530 0 25172 155545 3 1 7200916 10240000 0 130560 0 0 0.000 1336 2830 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-01-26 12:19:45] CVMFS is ok
[2026-01-26 12:19:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 12:19:45] Checking for apptainer binary...
[2026-01-26 12:19:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 12:19:45] Running /usr/bin/apptainer --version
[2026-01-26 12:19:45] apptainer version 1.4.5
[2026-01-26 12:19:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 12:19:46] ellievl
[2026-01-26 12:19:46] apptainer works
[2026-01-26 12:19:46] Set ATHENA_PROC_NUMBER=4
[2026-01-26 12:19:46] Set ATHENA_CORE_NUMBER=4
[2026-01-26 12:19:46] Starting ATLAS job with PandaID=6984061816
[2026-01-26 12:19:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 13:53:32]  *** The last 200 lines of the pilot log: ***
[2026-01-26 13:53:32]  workdir=None
[2026-01-26 13:53:32] ]
[2026-01-26 13:53:32] 2026-01-26 12:52:31,167 | INFO     | transferring file log.48317872._002831.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6984061816/log.48317872._002831.job.log.tgz.1 to /var/li
[2026-01-26 13:53:32] 2026-01-26 12:52:31,167 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6984061816/log.48317872._002831.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-01-26 13:53:32] 2026-01-26 12:52:31,196 | INFO     | adding to output.list: log.48317872._002831.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a9/5b/log.48317872._002831.job.log.tg
[2026-01-26 13:53:32] 2026-01-26 12:52:31,198 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 13:53:32] 2026-01-26 12:52:31,198 | INFO     | summary of transferred files:
[2026-01-26 13:53:32] 2026-01-26 12:52:31,198 | INFO     |  -- lfn=log.48317872._002831.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 13:53:32] 2026-01-26 12:52:31,198 | INFO     | stage-out finished correctly
[2026-01-26 13:53:32] 2026-01-26 12:52:31,420 | INFO     | time since job start (5533s) is within the limit (349056.0s)
[2026-01-26 13:53:32] 2026-01-26 12:52:32,780 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 13:53:32] 2026-01-26 12:52:33,426 | INFO     | time since job start (5535s) is within the limit (349056.0s)
[2026-01-26 13:53:32] 2026-01-26 12:52:33,488 | WARNING  | process 642246 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 13:53:32] 2026-01-26 12:52:33,489 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6984061816/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 13:53:32] 2026-01-26 12:52:33,489 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6984061816/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 13:53:32] 2026-01-26 12:52:33,490 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 13:53:32] 2026-01-26 12:52:33,490 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 13:53:32] 2026-01-26 12:52:33,490 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2557325 B
[2026-01-26 13:53:32] 2026-01-26 12:52:33,491 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15624 B
[2026-01-26 13:53:32] 2026-01-26 12:52:33,491 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2026-01-26 13:53:32] 2026-01-26 12:52:33,519 | INFO     | sufficient remaining disk space (55783194624 B)
[2026-01-26 13:53:32] 2026-01-26 12:52:33,520 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-01-26 13:53:32] 2026-01-26 12:52:33,521 | INFO     | size of work directory /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6984061816: 2858782 B (within 5033164800 B limit)
[2026-01-26 13:53:32] 2026-01-26 12:52:33,521 | INFO     | pfn file=/var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6984061816/HITS.48317872._002831.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-26 13:53:32] 2026-01-26 12:52:33,521 | INFO     | total size of present files: 0 B (workdir size: 2858782 B)
[2026-01-26 13:53:32] 2026-01-26 12:52:33,521 | INFO     | output file size check: skipping output file /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6984061816/HITS.48317872._002831.pool.root.1 since it does not exist
[2026-01-26 13:53:32] 2026-01-26 12:52:33,736 | INFO     | number of running child processes to parent process 642246: 1
[2026-01-26 13:53:32] 2026-01-26 12:52:33,736 | INFO     | maximum number of monitored processes: 6
[2026-01-26 13:53:32] 2026-01-26 12:52:34,422 | INFO     | job 6984061816 has state=finished
[2026-01-26 13:53:32] 2026-01-26 12:52:34,422 | INFO     | preparing for final server update for job 6984061816 in state='finished'
[2026-01-26 13:53:32] 2026-01-26 12:52:35,088 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-26 13:53:32] 2026-01-26 12:52:35,088 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6984061816/jobReport.json
[2026-01-26 13:53:32] 2026-01-26 12:52:35,090 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/2/workernode_map.json
[2026-01-26 13:53:32] 2026-01-26 12:52:35,090 | INFO     | this job has now completed (state=finished)
[2026-01-26 13:53:32] 2026-01-26 12:52:35,090 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 13:53:32] 2026-01-26 12:52:35,090 | INFO     | log transfer has been attempted: DONE
[2026-01-26 13:53:32] 2026-01-26 12:52:35,090 | INFO     | job 6984061816 has finished - writing final server update
[2026-01-26 13:53:32] 2026-01-26 12:52:35,091 | INFO     | total number of processed events: 400 (read)
[2026-01-26 13:53:32] 2026-01-26 12:52:35,093 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6984061816/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 13:53:32] 2026-01-26 12:52:35,094 | INFO     | extracted standard info from prmon json
[2026-01-26 13:53:32] 2026-01-26 12:52:35,094 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 13:53:32] 2026-01-26 12:52:35,094 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 13:53:32] 2026-01-26 12:52:35,094 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 13:53:32] 2026-01-26 12:52:35,094 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 13:53:32] 2026-01-26 12:52:35,095 | INFO     | fitting pss+swap vs Time
[2026-01-26 13:53:32] 2026-01-26 12:52:35,096 | INFO     | sum of square deviations: 183761585.0
[2026-01-26 13:53:32] 2026-01-26 12:52:35,096 | INFO     | sum of deviations: -17246214782.5
[2026-01-26 13:53:32] 2026-01-26 12:52:35,096 | INFO     | mean x: 1769429286.5
[2026-01-26 13:53:32] 2026-01-26 12:52:35,096 | INFO     | mean y: 2628371.2023809524
[2026-01-26 13:53:32] 2026-01-26 12:52:35,096 | INFO     | intersect: 166065396699.1134
[2026-01-26 13:53:32] 2026-01-26 12:52:35,096 | INFO     | chi2: 0.061205025847525824
[2026-01-26 13:53:32] 2026-01-26 12:52:35,096 | INFO     | current memory leak: -93.85 B/s (using 84 data points, chi2=0.06)
[2026-01-26 13:53:32] 2026-01-26 12:52:35,096 | INFO     | could have reported an average CPU frequency of 3700 MHz (7 samples)
[2026-01-26 13:53:32] 2026-01-26 12:52:35,097 | INFO     | ..............................
[2026-01-26 13:53:32] 2026-01-26 12:52:35,097 | INFO     | . Timing measurements:
[2026-01-26 13:53:32] 2026-01-26 12:52:35,097 | INFO     | . get job = 0 s
[2026-01-26 13:53:32] 2026-01-26 12:52:35,097 | INFO     | . initial setup = 11 s
[2026-01-26 13:53:32] 2026-01-26 12:52:35,097 | INFO     | . payload setup = 12 s
[2026-01-26 13:53:32] 2026-01-26 12:52:35,097 | INFO     | . stage-in = 0 s
[2026-01-26 13:53:32] 2026-01-26 12:52:35,097 | INFO     | . payload execution = 5504 s
[2026-01-26 13:53:32] 2026-01-26 12:52:35,097 | INFO     | . stage-out = 0 s
[2026-01-26 13:53:32] 2026-01-26 12:52:35,098 | INFO     | . log creation = 0 s
[2026-01-26 13:53:32] 2026-01-26 12:52:35,098 | INFO     | ..............................
[2026-01-26 13:53:32] 2026-01-26 12:52:35,141 | INFO     | 
[2026-01-26 13:53:32] 2026-01-26 12:52:35,141 | INFO     | job summary report
[2026-01-26 13:53:32] 2026-01-26 12:52:35,141 | INFO     | --------------------------------------------------
[2026-01-26 13:53:32] 2026-01-26 12:52:35,142 | INFO     | PanDA job id: 6984061816
[2026-01-26 13:53:32] 2026-01-26 12:52:35,142 | INFO     | task id: 48317872
[2026-01-26 13:53:32] 2026-01-26 12:52:35,142 | INFO     | errors: (none)
[2026-01-26 13:53:32] 2026-01-26 12:52:35,142 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 13:53:32] 2026-01-26 12:52:35,142 | INFO     | pilot state: finished 
[2026-01-26 13:53:32] 2026-01-26 12:52:35,142 | INFO     | transexitcode: 0
[2026-01-26 13:53:32] 2026-01-26 12:52:35,142 | INFO     | exeerrorcode: 0
[2026-01-26 13:53:32] 2026-01-26 12:52:35,142 | INFO     | exeerrordiag: 
[2026-01-26 13:53:32] 2026-01-26 12:52:35,142 | INFO     | exitcode: 0
[2026-01-26 13:53:32] 2026-01-26 12:52:35,143 | INFO     | exitmsg: OK
[2026-01-26 13:53:32] 2026-01-26 12:52:35,143 | INFO     | cpuconsumptiontime: 20853 s
[2026-01-26 13:53:32] 2026-01-26 12:52:35,143 | INFO     | nevents: 400
[2026-01-26 13:53:32] 2026-01-26 12:52:35,143 | INFO     | neventsw: 0
[2026-01-26 13:53:32] 2026-01-26 12:52:35,143 | INFO     | pid: 642246
[2026-01-26 13:53:32] 2026-01-26 12:52:35,143 | INFO     | pgrp: 642246
[2026-01-26 13:53:32] 2026-01-26 12:52:35,143 | INFO     | corecount: 4
[2026-01-26 13:53:32] 2026-01-26 12:52:35,143 | INFO     | event service: False
[2026-01-26 13:53:32] 2026-01-26 12:52:35,143 | INFO     | sizes: {0: 2284246, 10: 2284246, 5520: 2310763, 5521: 2319789, 5523: 2319845, 5525: 2320067}
[2026-01-26 13:53:32] 2026-01-26 12:52:35,143 | INFO     | --------------------------------------------------
[2026-01-26 13:53:32] 2026-01-26 12:52:35,144 | INFO     | 
[2026-01-26 13:53:32] 2026-01-26 12:52:35,144 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2026-01-26 13:53:32] 2026-01-26 12:52:35,180 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 13:53:32] 2026-01-26 12:52:35,180 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 13:53:32] 2026-01-26 12:52:35,180 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 13:53:32] 2026-01-26 12:52:35,180 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 13:53:32] 2026-01-26 12:52:35,181 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 13:53:32] 2026-01-26 12:52:35,181 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 13:53:32] 2026-01-26 12:52:35,181 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 13:53:32] 2026-01-26 12:52:35,181 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 13:53:32] 2026-01-26 12:52:35,181 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 13:53:32] 2026-01-26 12:52:35,181 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 13:53:32] 2026-01-26 12:52:35,181 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 13:53:32] 2026-01-26 12:52:35,181 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 13:53:32] 2026-01-26 12:52:35,181 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 13:53:32] 2026-01-26 12:52:35,181 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 13:53:32] 2026-01-26 12:52:35,181 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 13:53:32] 2026-01-26 12:52:35,181 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 13:53:32] 2026-01-26 12:52:35,181 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 13:53:32] 2026-01-26 12:52:35,181 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 13:53:32] 2026-01-26 12:52:35,181 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 13:53:32] 2026-01-26 12:52:35,181 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 13:53:32] 2026-01-26 12:52:35,182 | INFO     | job 6984061816 has completed (purged errors)
[2026-01-26 13:53:32] 2026-01-26 12:52:35,182 | INFO     | overall cleanup function is called
[2026-01-26 13:53:32] 2026-01-26 12:52:36,191 | INFO     | --- collectZombieJob: --- 10, [642246]
[2026-01-26 13:53:32] 2026-01-26 12:52:36,191 | INFO     | zombie collector waiting for pid 642246
[2026-01-26 13:53:32] 2026-01-26 12:52:36,191 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 13:53:32] 2026-01-26 12:52:36,191 | INFO     | collected zombie processes
[2026-01-26 13:53:32] 2026-01-26 12:52:36,191 | INFO     | will attempt to kill all subprocesses of pid=642246
[2026-01-26 13:53:32] 2026-01-26 12:52:36,403 | INFO     | process IDs to be killed: [642246] (in reverse order)
[2026-01-26 13:53:32] 2026-01-26 12:52:36,503 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 13:53:32] 2026-01-26 12:52:36,503 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 13:53:32] 2026-01-26 12:52:36,509 | INFO     | did not find any defunct processes belonging to 642246
[2026-01-26 13:53:32] 2026-01-26 12:52:36,514 | INFO     | did not find any defunct processes belonging to 642246
[2026-01-26 13:53:32] 2026-01-26 12:52:36,514 | INFO     | ready for new job
[2026-01-26 13:53:32] 2026-01-26 12:52:36,514 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 13:53:32] 2026-01-26 12:52:36,517 | INFO     | **************************************
[2026-01-26 13:53:32] 2026-01-26 12:52:36,517 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 13:53:32] 2026-01-26 12:52:36,517 | INFO     | **************************************
[2026-01-26 13:53:32] 2026-01-26 12:52:36,517 | INFO     | 
[2026-01-26 13:53:32] 2026-01-26 12:52:36,518 | INFO     | pilot is running in a VM
[2026-01-26 13:53:32] 2026-01-26 12:52:36,518 | INFO     | architecture information:
[2026-01-26 13:53:32] 2026-01-26 12:52:36,518 | INFO     | executing command: cat /etc/os-release
[2026-01-26 13:53:32] 2026-01-26 12:52:36,541 | INFO     | cat /etc/os-release:
[2026-01-26 13:53:32] NAME="CentOS Linux"
[2026-01-26 13:53:32] VERSION="7 (Core)"
[2026-01-26 13:53:32] ID="centos"
[2026-01-26 13:53:32] ID_LIKE="rhel fedora"
[2026-01-26 13:53:32] VERSION_ID="7"
[2026-01-26 13:53:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 13:53:32] ANSI_COLOR="0;31"
[2026-01-26 13:53:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 13:53:32] HOME_URL="https://www.centos.org/"
[2026-01-26 13:53:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 13:53:32] 
[2026-01-26 13:53:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 13:53:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 13:53:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 13:53:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 13:53:32] 
[2026-01-26 13:53:32] 2026-01-26 12:52:36,542 | INFO     | **************************************
[2026-01-26 13:53:32] 2026-01-26 12:52:37,046 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2026-01-26 13:53:32] 2026-01-26 12:52:37,065 | INFO     | sufficient remaining disk space (55787388928 B)
[2026-01-26 13:53:32] 2026-01-26 12:52:37,066 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 13:53:32] 2026-01-26 12:52:37,066 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 13:53:32] 2026-01-26 12:52:37,066 | INFO     | update_server=False
[2026-01-26 13:53:32] 2026-01-26 12:52:37,066 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 13:53:32] 2026-01-26 12:52:37,067 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:53:32] 2026-01-26 12:52:37,067 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 13:53:32] 2026-01-26 12:52:37,246 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:53:32] 2026-01-26 12:52:37,246 | INFO     | aborting loop
[2026-01-26 13:53:32] 2026-01-26 12:52:37,671 | INFO     | all job control threads have been joined
[2026-01-26 13:53:32] 2026-01-26 12:52:37,993 | INFO     | all data control threads have been joined
[2026-01-26 13:53:32] 2026-01-26 12:52:38,071 | INFO     | [job] queue monitor thread has finished
[2026-01-26 13:53:32] 2026-01-26 12:52:38,072 | INFO     | [job] retrieve thread has finished
[2026-01-26 13:53:32] 2026-01-26 12:52:38,212 | INFO     | all payload control threads have been joined
[2026-01-26 13:53:32] 2026-01-26 12:52:38,228 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 13:53:32] 2026-01-26 12:52:38,252 | INFO     | [job] job monitor thread has finished
[2026-01-26 13:53:32] 2026-01-26 12:52:38,255 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 13:53:32] 2026-01-26 12:52:38,269 | INFO     | [job] validate thread has finished
[2026-01-26 13:53:32] 2026-01-26 12:52:38,327 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 13:53:32] 2026-01-26 12:52:38,677 | INFO     | [job] control thread has finished
[2026-01-26 13:53:32] 2026-01-26 12:52:38,697 | INFO     | [payload] failed_post thread has finished
[2026-01-26 13:53:32] 2026-01-26 12:52:38,715 | INFO     | [data] copytool_in thread has finished
[2026-01-26 13:53:32] 2026-01-26 12:52:38,837 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 13:53:32] 2026-01-26 12:52:38,999 | INFO     | [data] control thread has finished
[2026-01-26 13:53:32] 2026-01-26 12:52:39,074 | INFO     | [data] copytool_out thread has finished
[2026-01-26 13:53:32] 2026-01-26 12:52:39,218 | INFO     | [payload] control thread has finished
[2026-01-26 13:53:32] 2026-01-26 12:52:39,234 | INFO     | [payload] validate_post thread has finished
[2026-01-26 13:53:32] 2026-01-26 12:52:42,846 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 13:53:32] 2026-01-26 12:52:47,664 | INFO     | job.realtimelogging is not enabled
[2026-01-26 13:53:32] 2026-01-26 12:52:48,670 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 13:53:32] 2026-01-26 12:53:06,765 | INFO     | PID=637710 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 13:53:32] 2026-01-26 12:53:06,765 | INFO     | .. there are 2 such processes running
[2026-01-26 13:53:32] 2026-01-26 12:53:06,766 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 13:53:32] 2026-01-26 12:53:06,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 13:53:32] 2026-01-26 12:53:06,766 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 13:53:32] 2026-01-26 12:53:25,845 | INFO     | [monitor] cgroup control has ended
[2026-01-26 13:53:32] 2026-01-26 12:53:27,121 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131760705107776)>', '<ExcThread(monitor, started 131759463200512)>']
[2026-01-26 13:53:32] 2026-01-26 12:53:27,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 13:53:32] 2026-01-26 12:53:27,872 | INFO     | [monitor] control thread has ended
[2026-01-26 13:53:32] 2026-01-26 12:53:32,147 | INFO     | all workflow threads have been joined
[2026-01-26 13:53:32] 2026-01-26 12:53:32,147 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 13:53:32] 2026-01-26 12:53:32,147 | INFO     | traces error code: 0
[2026-01-26 13:53:32] 2026-01-26 12:53:32,147 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 13:53:32] 2026-01-26 12:53:32,269 [wrapper] ==== pilot stdout END ====
[2026-01-26 13:53:32] 2026-01-26 12:53:32,275 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 13:53:32] 2026-01-26 12:53:32,281 [wrapper] pilotpid: 637710
[2026-01-26 13:53:32] 2026-01-26 12:53:32,287 [wrapper] Pilot exit status: 0
[2026-01-26 13:53:32] 2026-01-26 12:53:32,313 [wrapper] pandaids: 6984061816
[2026-01-26 13:53:32] 2026-01-26 12:53:32,390 [wrapper] cleanup supervisor_pilot  666558 637711
[2026-01-26 13:53:32] 2026-01-26 12:53:32,397 [wrapper] Test setup, not cleaning
[2026-01-26 13:53:32] 2026-01-26 12:53:32,404 [wrapper] apfmon messages muted
[2026-01-26 13:53:32] 2026-01-26 12:53:32,410 [wrapper] ==== wrapper stdout END ====
[2026-01-26 13:53:32] 2026-01-26 12:53:32,416 [wrapper] ==== wrapper stderr END ====
[2026-01-26 13:53:32]  *** Error codes and diagnostics ***
[2026-01-26 13:53:32]     "exeErrorCode": 0,
[2026-01-26 13:53:32]     "exeErrorDiag": "",
[2026-01-26 13:53:32]     "pilotErrorCode": 0,
[2026-01-26 13:53:32]     "pilotErrorDiag": "",
[2026-01-26 13:53:32]  *** Listing of results directory ***
[2026-01-26 13:53:32] insgesamt 674780
[2026-01-26 13:53:32] -rw-r--r-- 1 yeti boinc    584422 Jan 26 08:37 pilot3.tar.gz
[2026-01-26 13:53:32] -rw-r--r-- 1 yeti boinc      5111 Jan 26 08:38 queuedata.json
[2026-01-26 13:53:32] -rwx------ 1 yeti boinc     36322 Jan 26 08:38 runpilot2-wrapper.sh
[2026-01-26 13:53:32] -rw-r--r-- 1 yeti boinc       100 Jan 26 12:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 13:53:32] -rwxr-xr-x 1 yeti boinc      7986 Jan 26 12:19 run_atlas
[2026-01-26 13:53:32] -rw-r--r-- 1 yeti boinc       105 Jan 26 12:19 job.xml
[2026-01-26 13:53:32] -rw-r--r-- 2 yeti boinc 493675280 Jan 26 12:19 EVNT.48317869._000057.pool.root.1
[2026-01-26 13:53:32] -rw-r--r-- 2 yeti boinc    597754 Jan 26 12:19 input.tar.gz
[2026-01-26 13:53:32] -rw-r--r-- 2 yeti boinc     15845 Jan 26 12:19 start_atlas.sh
[2026-01-26 13:53:32] drwxrwx--x 2 yeti boinc      4096 Jan 26 12:19 shared
[2026-01-26 13:53:32] -rw-r--r-- 1 yeti boinc      6557 Jan 26 12:19 init_data.xml
[2026-01-26 13:53:32] -rw-r--r-- 1 yeti boinc         0 Jan 26 12:19 boinc_setup_complete
[2026-01-26 13:53:32] -rw-r--r-- 1 yeti boinc         0 Jan 26 12:19 boinc_lockfile
[2026-01-26 13:53:32] -rw-r--r-- 1 yeti boinc      2514 Jan 26 12:19 pandaJob.out
[2026-01-26 13:53:32] -rw------- 1 yeti boinc        52 Jan 26 12:19 setup.sh.local
[2026-01-26 13:53:32] -rw------- 1 yeti boinc   1002189 Jan 26 12:20 agis_schedconf.cvmfs.json
[2026-01-26 13:53:32] -rw------- 1 yeti boinc   1516246 Jan 26 12:20 agis_ddmendpoints.agis.ALL.json
[2026-01-26 13:53:32] -rw------- 1 yeti boinc       419 Jan 26 12:20 workernode_map.json
[2026-01-26 13:53:32] drwx------ 5 yeti boinc      4096 Jan 26 12:20 pilot3
[2026-01-26 13:53:32] -rw------- 1 yeti boinc 191179407 Jan 26 13:52 HITS.48317872._002831.pool.root.1
[2026-01-26 13:53:32] -rw-r--r-- 1 yeti boinc       530 Jan 26 13:52 boinc_task_state.xml
[2026-01-26 13:53:32] -rw------- 1 yeti boinc      1013 Jan 26 13:52 memory_monitor_summary.json
[2026-01-26 13:53:32] -rw------- 1 yeti boinc    280978 Jan 26 13:52 log.48317872._002831.job.log.tgz.1
[2026-01-26 13:53:32] -rw------- 1 yeti boinc      6271 Jan 26 13:52 heartbeat.json
[2026-01-26 13:53:32] -rw------- 1 yeti boinc        95 Jan 26 13:53 pilot_heartbeat.json
[2026-01-26 13:53:32] -rw-r--r-- 1 yeti boinc      8192 Jan 26 13:53 boinc_mmap_file
[2026-01-26 13:53:32] -rw-r--r-- 1 yeti boinc        27 Jan 26 13:53 wrapper_checkpoint.txt
[2026-01-26 13:53:32] -rw------- 1 yeti boinc      4966 Jan 26 13:53 pilotlog.txt
[2026-01-26 13:53:32] -rw------- 1 yeti boinc    807142 Jan 26 13:53 log.48317872._002831.job.log.1
[2026-01-26 13:53:32] -rw------- 1 yeti boinc       357 Jan 26 13:53 output.list
[2026-01-26 13:53:32] -rw-r--r-- 1 yeti boinc       620 Jan 26 13:53 runtime_log
[2026-01-26 13:53:32] -rw------- 1 yeti boinc   1105920 Jan 26 13:53 result.tar.gz
[2026-01-26 13:53:32] -rw-r--r-- 1 yeti boinc      9536 Jan 26 13:53 runtime_log.err
[2026-01-26 13:53:32] -rw------- 1 yeti boinc       637 Jan 26 13:53 DeDODmeMW48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbl2KDmMr3tvn.diag
[2026-01-26 13:53:32] -rw-r--r-- 1 yeti boinc     22331 Jan 26 13:53 stderr.txt
[2026-01-26 13:53:32] HITS file was successfully produced:
[2026-01-26 13:53:32] -rw------- 1 yeti boinc 191179407 Jan 26 13:52 shared/HITS.pool.root.1
[2026-01-26 13:53:32]  *** Contents of shared directory: ***
[2026-01-26 13:53:32] insgesamt 670496
[2026-01-26 13:53:32] -rw-r--r-- 2 yeti boinc 493675280 Jan 26 12:19 ATLAS.root_0
[2026-01-26 13:53:32] -rw-r--r-- 2 yeti boinc    597754 Jan 26 12:19 input.tar.gz
[2026-01-26 13:53:32] -rw-r--r-- 2 yeti boinc     15845 Jan 26 12:19 start_atlas.sh
[2026-01-26 13:53:32] -rw------- 1 yeti boinc 191179407 Jan 26 13:52 HITS.pool.root.1
[2026-01-26 13:53:32] -rw------- 1 yeti boinc   1105920 Jan 26 13:53 result.tar.gz
13:53:33 (633384): run_atlas exited; CPU time 21074.949523
13:53:33 (633384): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN