Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-26 13:24:10 (42828): vboxwrapper version 26210
2026-01-26 13:24:10 (42828): BOINC client version: 8.2.8
2026-01-26 13:24:11 (42828): Detected: VirtualBox VboxManage Interface (Version: 6.1.26)
2026-01-26 13:24:11 (42828): Successfully copied 'init_data.xml' to the shared directory.
2026-01-26 13:24:11 (42828): Create VM. (boinc_5b117116a3356522, slot#0)
2026-01-26 13:24:12 (42828): Setting Memory Size for VM. (4800MB)
2026-01-26 13:24:12 (42828): Setting CPU Count for VM. (8)
2026-01-26 13:24:12 (42828): Setting Chipset Options for VM.
2026-01-26 13:24:13 (42828): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-26 13:24:13 (42828): Setting Boot Options for VM.
2026-01-26 13:24:14 (42828): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-26 13:24:14 (42828): Enabling VM Network Access.
2026-01-26 13:24:14 (42828): Disabling USB Support for VM.
2026-01-26 13:24:14 (42828): Disabling COM Port Support for VM.
2026-01-26 13:24:15 (42828): Disabling LPT Port Support for VM.
2026-01-26 13:24:15 (42828): Disabling Audio Support for VM.
2026-01-26 13:24:15 (42828): Disabling Clipboard Support for VM.
2026-01-26 13:24:16 (42828): Disabling Drag and Drop Support for VM.
2026-01-26 13:24:16 (42828): Adding storage controller(s) to VM.
2026-01-26 13:24:16 (42828): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-26 13:24:17 (42828): Adding VirtualBox Guest Additions to VM.
2026-01-26 13:24:18 (42828): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-26 13:24:18 (42828): forwarding host port 58684 to guest port 80
2026-01-26 13:24:18 (42828): Enabling remote desktop for VM.
2026-01-26 13:24:19 (42828): Enabling shared directory for VM.
2026-01-26 13:24:19 (42828): Starting VM using VBoxManage interface. (boinc_5b117116a3356522, slot#0)
2026-01-26 13:24:26 (42828): Successfully started VM. (PID = '26816')
2026-01-26 13:24:26 (42828): Reporting VM Process ID to BOINC.
2026-01-26 13:24:26 (42828): Guest Log: BIOS: VirtualBox 6.1.26
2026-01-26 13:24:26 (42828): Guest Log: CPUID EDX: 0x178bfbff
2026-01-26 13:24:26 (42828): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-26 13:24:26 (42828): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-26 13:24:26 (42828): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-26 13:24:26 (42828): Detected: Web Application Enabled (http://localhost:58684)
2026-01-26 13:24:26 (42828): Detected: Remote Desktop Enabled (localhost:58685)
2026-01-26 13:24:26 (42828): Preference change detected
2026-01-26 13:24:26 (42828): Setting CPU throttle for VM. (90%)
2026-01-26 13:24:26 (42828): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-26 13:24:28 (42828): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-26 13:24:28 (42828): Guest Log: BIOS: Booting from Hard Disk...
2026-01-26 13:24:31 (42828): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-26 13:24:31 (42828): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-26 13:24:31 (42828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-26 13:24:40 (42828): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-26 13:24:40 (42828): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-01-26 13:24:54 (42828): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-26 13:24:54 (42828): Guest Log: 00:00:00.000245 main     Log opened 2026-01-26T13:24:52.924889000Z
2026-01-26 13:24:54 (42828): Guest Log: 00:00:00.000396 main     OS Product: Linux
2026-01-26 13:24:54 (42828): Guest Log: 00:00:00.000434 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-26 13:24:54 (42828): Guest Log: 00:00:00.000463 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-26 13:24:54 (42828): Guest Log: 00:00:00.000489 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-26 13:24:54 (42828): Guest Log: 00:00:00.000490 main     Process ID: 1371
2026-01-26 13:24:54 (42828): Guest Log: 00:00:00.000490 main     Package type: LINUX_64BITS_GENERIC
2026-01-26 13:24:54 (42828): Guest Log: 00:00:00.001392 main     5.2.32 r132073 started. Verbose level = 0
2026-01-26 13:24:55 (42828): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-26 13:24:55 (42828): Guest Log: [INFO] Mounting shared directory
2026-01-26 13:24:55 (42828): Guest Log: [INFO] Checking for init_data.xml
2026-01-26 13:24:59 (42828): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-26 13:24:59 (42828): Guest Log: [INFO] Detected branch: prod
2026-01-26 13:24:59 (42828): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-26 13:24:59 (42828): Guest Log: Copying input files
2026-01-26 13:25:04 (42828): Guest Log: 00:00:10.006828 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 350 351 000ns (GuestNow=1 769 455 504 278 884 000 ns GuestLast=1 769 433 892 928 533 000 ns fSetTimeLastLoop=true )
2026-01-26 13:25:05 (42828): Guest Log: Copied input files into RunAtlas.
2026-01-26 13:25:05 (42828): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-26 13:25:05 (42828): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-26 13:25:05 (42828): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-26 13:25:05 (42828): Guest Log: Further information can be found at the LHC@home message board.
2026-01-26 13:25:20 (42828): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-26 13:25:20 (42828): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-26 13:25:20 (42828): Guest Log: 2.6.3.0 1649 0 32216 155559 3 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-26 13:25:23 (42828): Guest Log: copied the webapp to /var/www
2026-01-26 13:25:23 (42828): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-26 13:25:23 (42828): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-26 13:25:23 (42828): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-26 13:25:23 (42828): Guest Log:  *** Starting ATLAS job. (PandaID=6983772605 taskID=48317872) ***
2026-01-26 14:45:32 (42828): Guest Log:  *** Job finished ***
2026-01-26 14:45:32 (42828): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-26 14:45:32 (42828): Guest Log: 2026-01-26 20:45:19,299 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2026-01-26 14:45:32 (42828): Guest Log: 2026-01-26 20:45:23,410 | INFO     | [data] queue_monitor thread has finished
2026-01-26 14:45:32 (42828): Guest Log: 2026-01-26 20:45:25,770 | INFO     | [monitor] cgroup control has ended
2026-01-26 14:45:32 (42828): Guest Log: 2026-01-26 20:45:26,218 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139850882000704)>', '<ExcThread(monitor, started 139850158167808)>']
2026-01-26 14:45:32 (42828): Guest Log: 2026-01-26 20:45:26,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-26 14:45:32 (42828): Guest Log: 2026-01-26 20:45:26,437 | INFO     | [monitor] control thread has ended
2026-01-26 14:45:32 (42828): Guest Log: 2026-01-26 20:45:31,224 | INFO     | all workflow threads have been joined
2026-01-26 14:45:32 (42828): Guest Log: 2026-01-26 20:45:31,224 | INFO     | end of generic workflow (traces error code: 0)
2026-01-26 14:45:32 (42828): Guest Log: 2026-01-26 20:45:31,224 | INFO     | traces error code: 0
2026-01-26 14:45:32 (42828): Guest Log: 2026-01-26 20:45:31,224 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-26 14:45:32 (42828): Guest Log: 2026-01-26 20:45:31,411 [wrapper] ==== pilot stdout END ====
2026-01-26 14:45:32 (42828): Guest Log: 2026-01-26 20:45:31,422 [wrapper] ==== wrapper stdout RESUME ====
2026-01-26 14:45:32 (42828): Guest Log: 2026-01-26 20:45:31,429 [wrapper] pilotpid: 6095
2026-01-26 14:45:32 (42828): Guest Log: 2026-01-26 20:45:31,439 [wrapper] Pilot exit status: 0
2026-01-26 14:45:32 (42828): Guest Log: 2026-01-26 20:45:31,511 [wrapper] pandaids: 6983772605
2026-01-26 14:45:32 (42828): Guest Log: 2026-01-26 20:45:31,558 [wrapper] cleanup supervisor_pilot 16247 6096
2026-01-26 14:45:32 (42828): Guest Log: 2026-01-26 20:45:31,567 [wrapper] Test setup, not cleaning
2026-01-26 14:45:32 (42828): Guest Log: 2026-01-26 20:45:31,580 [wrapper] apfmon messages muted
2026-01-26 14:45:32 (42828): Guest Log: 2026-01-26 20:45:31,587 [wrapper] ==== wrapper stdout END ====
2026-01-26 14:45:32 (42828): Guest Log: 2026-01-26 20:45:31,596 [wrapper] ==== wrapper stderr END ====
2026-01-26 14:45:32 (42828): Guest Log:  *** Error codes and diagnostics ***
2026-01-26 14:45:32 (42828): Guest Log:     "exeErrorCode": 0,
2026-01-26 14:45:32 (42828): Guest Log:     "exeErrorDiag": "",
2026-01-26 14:45:32 (42828): Guest Log:     "pilotErrorCode": 0,
2026-01-26 14:45:32 (42828): Guest Log:     "pilotErrorDiag": "",
2026-01-26 14:45:32 (42828): Guest Log:  *** Listing of results directory ***
2026-01-26 14:45:32 (42828): Guest Log: total 183628
2026-01-26 14:45:32 (42828): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 26 03:16 pilot3.tar.gz
2026-01-26 14:45:32 (42828): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 26 03:17 queuedata.json
2026-01-26 14:45:32 (42828): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 26 03:17 runpilot2-wrapper.sh
2026-01-26 14:45:32 (42828): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 26 19:25 start_atlas.sh
2026-01-26 14:45:32 (42828): Guest Log: -rwxr-xr-x. 1 atlas atlas    597754 Jan 26 19:25 input.tar.gz
2026-01-26 14:45:32 (42828): Guest Log: -rwxr-xr-x. 1 atlas atlas      8443 Jan 26 19:25 init_data.xml
2026-01-26 14:45:32 (42828): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 26 19:25 EVNT.48317869._000037.pool.root.1 -> /data/./ATLAS.root_0
2026-01-26 14:45:32 (42828): Guest Log: -rw-r--r--. 1 atlas atlas      2514 Jan 26 19:25 pandaJob.out
2026-01-26 14:45:32 (42828): Guest Log: -rw-------. 1 atlas atlas   1006449 Jan 26 19:26 agis_schedconf.cvmfs.json
2026-01-26 14:45:32 (42828): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 26 19:26 agis_ddmendpoints.agis.ALL.json
2026-01-26 14:45:32 (42828): Guest Log: -rw-------. 1 atlas atlas       442 Jan 26 19:26 workernode_map.json
2026-01-26 14:45:32 (42828): Guest Log: drwx------. 5 atlas atlas      4096 Jan 26 19:26 pilot3
2026-01-26 14:45:32 (42828): Guest Log: -rw-------. 1 atlas atlas 182074222 Jan 26 20:44 HITS.48317872._001860.pool.root.1
2026-01-26 14:45:32 (42828): Guest Log: -rw-------. 1 atlas atlas      1051 Jan 26 20:45 memory_monitor_summary.json
2026-01-26 14:45:32 (42828): Guest Log: -rw-------. 1 atlas atlas    363751 Jan 26 20:45 log.48317872._001860.job.log.tgz.1
2026-01-26 14:45:32 (42828): Guest Log: -rw-------. 1 atlas atlas        95 Jan 26 20:45 pilot_heartbeat.json
2026-01-26 14:45:32 (42828): Guest Log: -rw-------. 1 atlas atlas      6390 Jan 26 20:45 heartbeat.json
2026-01-26 14:45:32 (42828): Guest Log: -rw-------. 1 atlas atlas      4610 Jan 26 20:45 pilotlog.txt
2026-01-26 14:45:32 (42828): Guest Log: -rw-------. 1 atlas atlas    682441 Jan 26 20:45 log.48317872._001860.job.log.1
2026-01-26 14:45:32 (42828): Guest Log: -rw-------. 1 atlas atlas       357 Jan 26 20:45 output.list
2026-01-26 14:45:32 (42828): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 26 20:45 runtime_log
2026-01-26 14:45:32 (42828): Guest Log: -rw-------. 1 atlas atlas   1064960 Jan 26 20:45 result.tar.gz
2026-01-26 14:45:32 (42828): Guest Log: -rw-r--r--. 1 atlas atlas      8754 Jan 26 20:45 runtime_log.err
2026-01-26 14:45:32 (42828): Guest Log: -rw-------. 1 atlas atlas       656 Jan 26 20:45 QXcLDmwHS48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTK2KDmB5s5Qn.diag
2026-01-26 14:45:32 (42828): Guest Log: Looking for outputfile HITS.48317872._001860.pool.root.1
2026-01-26 14:45:32 (42828): Guest Log: HITS file was successfully produced
2026-01-26 14:45:33 (42828): Guest Log: -rw-------. 1 atlas atlas 182074222 Jan 26 20:44 /home/atlas/RunAtlas/HITS.48317872._001860.pool.root.1
2026-01-26 14:45:33 (42828): Guest Log: Successfully finished the ATLAS job!
2026-01-26 14:45:33 (42828): Guest Log: Copying the results back to the shared directory!
2026-01-26 14:45:33 (42828): Guest Log:  *** Contents of shared directory: ***
2026-01-26 14:45:33 (42828): Guest Log: total 672944
2026-01-26 14:45:33 (42828): Guest Log: -rwxrwxrwx. 1 root root 505325181 Jan 26 19:24 ATLAS.root_0
2026-01-26 14:45:33 (42828): Guest Log: -rwxrwxrwx. 1 root root 182074222 Jan 26 20:45 HITS.pool.root.1
2026-01-26 14:45:33 (42828): Guest Log: -rwxrwxrwx. 1 root root      8443 Jan 26 19:24 init_data.xml
2026-01-26 14:45:33 (42828): Guest Log: -rwxrwxrwx. 1 root root    597754 Jan 26 11:22 input.tar.gz
2026-01-26 14:45:33 (42828): Guest Log: -rwxrwxrwx. 1 root root   1064960 Jan 26  2026 result.tar.gz
2026-01-26 14:45:33 (42828): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 26 11:22 start_atlas.sh
2026-01-26 14:45:33 (42828): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-26 14:45:33 (42828): VM Completion File Detected.
2026-01-26 14:45:33 (42828): Powering off VM.
2026-01-26 14:45:34 (42828): Successfully stopped VM.
2026-01-26 14:45:34 (42828): Deregistering VM. (boinc_5b117116a3356522, slot#0)
2026-01-26 14:45:34 (42828): Removing network bandwidth throttle group from VM.
2026-01-26 14:45:35 (42828): Removing VM from VirtualBox.
2026-01-26 14:45:40 (42828): called boinc_finish(0)

</stderr_txt>
]]>

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