Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
12:13:16 (255180): wrapper (7.7.26015): starting
12:13:16 (255180): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 12:13:16] Arguments: --nthreads 4
[2026-01-26 12:13:16] Threads: 4
[2026-01-26 12:13:16] Checking for CVMFS
[2026-01-26 12:13:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 12:13:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 12:13:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 12:13:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 12:13:17] 2.13.1.0 4377 735 64376 155544 2 188 8777805 10240000 902 130560 0 622583 99.992 29855 823 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-01-26 12:13:17] CVMFS is ok
[2026-01-26 12:13:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 12:13:17] Checking for apptainer binary...
[2026-01-26 12:13:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 12:13:17] Running /usr/bin/apptainer --version
[2026-01-26 12:13:17] apptainer version 1.4.5
[2026-01-26 12:13:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 12:13:17] woolyvlneu
[2026-01-26 12:13:17] apptainer works
[2026-01-26 12:13:17] Set ATHENA_PROC_NUMBER=4
[2026-01-26 12:13:17] Set ATHENA_CORE_NUMBER=4
[2026-01-26 12:13:17] Starting ATLAS job with PandaID=6985829393
[2026-01-26 12:13:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:36:08 (3906): wrapper (7.7.26015): starting
13:36:08 (3906): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 13:36:08] Arguments: --nthreads 4
[2026-01-26 13:36:08] Threads: 4
[2026-01-26 13:36:08] This job has been restarted, cleaning up previous attempt
[2026-01-26 13:36:08] Checking for CVMFS
[2026-01-26 13:36:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 13:36:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 13:36:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 13:36:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 13:36:11] 2.13.1.0 4237 0 25220 155545 3 1 8799177 10240000 0 130560 0 0 100.000 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-01-26 13:36:11] CVMFS is ok
[2026-01-26 13:36:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 13:36:11] Checking for apptainer binary...
[2026-01-26 13:36:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 13:36:11] Running /usr/bin/apptainer --version
[2026-01-26 13:36:12] apptainer version 1.4.5
[2026-01-26 13:36:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 13:36:12] woolyvlneu
[2026-01-26 13:36:12] apptainer works
[2026-01-26 13:36:12] Set ATHENA_PROC_NUMBER=4
[2026-01-26 13:36:12] Set ATHENA_CORE_NUMBER=4
[2026-01-26 13:36:12] Starting ATLAS job with PandaID=6985829393
[2026-01-26 13:36:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 15:57:41]  *** The last 200 lines of the pilot log: ***
[2026-01-26 15:57:41] 2026-01-26 14:56:36,120 | INFO     | this job has now completed (state=finished)
[2026-01-26 15:57:41] 2026-01-26 14:56:36,120 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 15:57:41] 2026-01-26 14:56:36,120 | INFO     | log transfer has been attempted: DONE
[2026-01-26 15:57:41] 2026-01-26 14:56:36,120 | INFO     | job 6985829393 has finished - writing final server update
[2026-01-26 15:57:41] 2026-01-26 14:56:36,120 | INFO     | total number of processed events: 400 (read)
[2026-01-26 15:57:41] 2026-01-26 14:56:36,122 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6985829393/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 15:57:41] 2026-01-26 14:56:36,122 | INFO     | extracted standard info from prmon json
[2026-01-26 15:57:41] 2026-01-26 14:56:36,122 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 15:57:41] 2026-01-26 14:56:36,122 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 15:57:41] 2026-01-26 14:56:36,123 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 15:57:41] 2026-01-26 14:56:36,123 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 15:57:41] 2026-01-26 14:56:36,124 | INFO     | fitting pss+swap vs Time
[2026-01-26 15:57:41] 2026-01-26 14:56:36,124 | INFO     | sum of square deviations: 814878534.5
[2026-01-26 15:57:41] 2026-01-26 14:56:36,124 | INFO     | sum of deviations: 18939160470.5
[2026-01-26 15:57:41] 2026-01-26 14:56:36,124 | INFO     | mean x: 1769435183.5
[2026-01-26 15:57:41] 2026-01-26 14:56:36,124 | INFO     | mean y: 2367705.934782609
[2026-01-26 15:57:41] 2026-01-26 14:56:36,124 | INFO     | intersect: -41122309732.05596
[2026-01-26 15:57:41] 2026-01-26 14:56:36,124 | INFO     | chi2: 1.69984494095202
[2026-01-26 15:57:41] 2026-01-26 14:56:36,124 | INFO     | sum of square deviations: 729472282.0
[2026-01-26 15:57:41] 2026-01-26 14:56:36,125 | INFO     | sum of deviations: 18347972169.000004
[2026-01-26 15:57:41] 2026-01-26 14:56:36,125 | INFO     | mean x: 1769435031.0
[2026-01-26 15:57:41] 2026-01-26 14:56:36,125 | INFO     | mean y: 2366649.864661654
[2026-01-26 15:57:41] 2026-01-26 14:56:36,125 | INFO     | intersect: -44503155362.06239
[2026-01-26 15:57:41] 2026-01-26 14:56:36,125 | INFO     | chi2: 1.7020135344667584
[2026-01-26 15:57:41] 2026-01-26 14:56:36,125 | INFO     | current chi2=1.7020135344667584 (change=-0.12757596075344768 %)
[2026-01-26 15:57:41] 2026-01-26 14:56:36,125 | INFO     | right removable region: 132
[2026-01-26 15:57:41] 2026-01-26 14:56:36,125 | INFO     | sum of square deviations: 729472282.0
[2026-01-26 15:57:41] 2026-01-26 14:56:36,125 | INFO     | sum of deviations: -4111545668.0
[2026-01-26 15:57:41] 2026-01-26 14:56:36,125 | INFO     | mean x: 1769435336.0
[2026-01-26 15:57:41] 2026-01-26 14:56:36,125 | INFO     | mean y: 2408291.203007519
[2026-01-26 15:57:41] 2026-01-26 14:56:36,125 | INFO     | intersect: 9975527722.952608
[2026-01-26 15:57:41] 2026-01-26 14:56:36,125 | INFO     | chi2: 0.00799674921212847
[2026-01-26 15:57:41] 2026-01-26 14:56:36,126 | INFO     | current chi2=0.00799674921212847 (change=99.52956007812985 %)
[2026-01-26 15:57:41] 2026-01-26 14:56:36,126 | INFO     | sum of square deviations: 650252192.0
[2026-01-26 15:57:41] 2026-01-26 14:56:36,126 | INFO     | sum of deviations: -4370061441.5
[2026-01-26 15:57:41] 2026-01-26 14:56:36,126 | INFO     | mean x: 1769435488.5
[2026-01-26 15:57:41] 2026-01-26 14:56:36,126 | INFO     | mean y: 2408771.0859375
[2026-01-26 15:57:41] 2026-01-26 14:56:36,126 | INFO     | intersect: 11894013131.130241
[2026-01-26 15:57:41] 2026-01-26 14:56:36,126 | INFO     | chi2: 0.006383108499331106
[2026-01-26 15:57:41] 2026-01-26 14:56:36,126 | INFO     | current chi2=0.006383108499331106 (change=20.17870849757293 %)
[2026-01-26 15:57:41] 2026-01-26 14:56:36,126 | INFO     | left removable region: 20
[2026-01-26 15:57:41] 2026-01-26 14:56:36,126 | INFO     | sum of square deviations: 435610028.0
[2026-01-26 15:57:41] 2026-01-26 14:56:36,126 | INFO     | sum of deviations: -3118162193.0
[2026-01-26 15:57:41] 2026-01-26 14:56:36,126 | INFO     | mean x: 1769435610.5
[2026-01-26 15:57:41] 2026-01-26 14:56:36,126 | INFO     | mean y: 2407116.160714286
[2026-01-26 15:57:41] 2026-01-26 14:56:36,126 | INFO     | intersect: 12668293732.547274
[2026-01-26 15:57:41] 2026-01-26 14:56:36,126 | INFO     | chi2: 0.006128517647304092
[2026-01-26 15:57:41] 2026-01-26 14:56:36,127 | INFO     | current memory leak: -7.16 B/s (using 112 data points, chi2=0.01)
[2026-01-26 15:57:41] 2026-01-26 14:56:36,127 | INFO     | could have reported an average CPU frequency of 3700 MHz (8 samples)
[2026-01-26 15:57:41] 2026-01-26 14:56:36,127 | INFO     | ..............................
[2026-01-26 15:57:41] 2026-01-26 14:56:36,127 | INFO     | . Timing measurements:
[2026-01-26 15:57:41] 2026-01-26 14:56:36,127 | INFO     | . get job = 0 s
[2026-01-26 15:57:41] 2026-01-26 14:56:36,127 | INFO     | . initial setup = 1 s
[2026-01-26 15:57:41] 2026-01-26 14:56:36,127 | INFO     | . payload setup = 5 s
[2026-01-26 15:57:41] 2026-01-26 14:56:36,127 | INFO     | . stage-in = 0 s
[2026-01-26 15:57:41] 2026-01-26 14:56:36,127 | INFO     | . payload execution = 8390 s
[2026-01-26 15:57:41] 2026-01-26 14:56:36,127 | INFO     | . stage-out = 0 s
[2026-01-26 15:57:41] 2026-01-26 14:56:36,127 | INFO     | . log creation = 0 s
[2026-01-26 15:57:41] 2026-01-26 14:56:36,127 | INFO     | ..............................
[2026-01-26 15:57:41] 2026-01-26 14:56:36,158 | INFO     | 
[2026-01-26 15:57:41] 2026-01-26 14:56:36,158 | INFO     | job summary report
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | --------------------------------------------------
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | PanDA job id: 6985829393
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | task id: 48312995
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | errors: (none)
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | pilot state: finished 
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | transexitcode: 0
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | exeerrorcode: 0
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | exeerrordiag: 
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | exitcode: 0
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | exitmsg: OK
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | cpuconsumptiontime: 32389 s
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | nevents: 400
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | neventsw: 0
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | pid: 17711
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | pgrp: 17711
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | corecount: 4
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | event service: False
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | sizes: {0: 2284052, 1: 2284314, 11: 2284342, 8400: 2312252, 8401: 2321472}
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | --------------------------------------------------
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | 
[2026-01-26 15:57:41] 2026-01-26 14:56:36,159 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2026-01-26 15:57:41] 2026-01-26 14:56:36,176 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 15:57:41] 2026-01-26 14:56:36,176 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 15:57:41] 2026-01-26 14:56:36,176 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 15:57:41] 2026-01-26 14:56:36,176 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 15:57:41] 2026-01-26 14:56:36,176 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 15:57:41] 2026-01-26 14:56:36,176 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 15:57:41] 2026-01-26 14:56:36,176 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 15:57:41] 2026-01-26 14:56:36,176 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 15:57:41] 2026-01-26 14:56:36,177 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 15:57:41] 2026-01-26 14:56:36,177 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 15:57:41] 2026-01-26 14:56:36,177 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 15:57:41] 2026-01-26 14:56:36,177 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 15:57:41] 2026-01-26 14:56:36,177 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 15:57:41] 2026-01-26 14:56:36,177 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 15:57:41] 2026-01-26 14:56:36,177 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 15:57:41] 2026-01-26 14:56:36,177 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 15:57:41] 2026-01-26 14:56:36,177 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 15:57:41] 2026-01-26 14:56:36,177 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 15:57:41] 2026-01-26 14:56:36,177 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 15:57:41] 2026-01-26 14:56:36,177 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 15:57:41] 2026-01-26 14:56:36,177 | INFO     | job 6985829393 has completed (purged errors)
[2026-01-26 15:57:41] 2026-01-26 14:56:36,177 | INFO     | overall cleanup function is called
[2026-01-26 15:57:41] 2026-01-26 14:56:37,184 | INFO     | --- collectZombieJob: --- 10, [17711]
[2026-01-26 15:57:41] 2026-01-26 14:56:37,185 | INFO     | zombie collector waiting for pid 17711
[2026-01-26 15:57:41] 2026-01-26 14:56:37,185 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 15:57:41] 2026-01-26 14:56:37,185 | INFO     | collected zombie processes
[2026-01-26 15:57:41] 2026-01-26 14:56:37,185 | INFO     | will attempt to kill all subprocesses of pid=17711
[2026-01-26 15:57:41] 2026-01-26 14:56:37,277 | INFO     | process IDs to be killed: [17711] (in reverse order)
[2026-01-26 15:57:41] 2026-01-26 14:56:37,323 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 15:57:41] 2026-01-26 14:56:37,323 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 15:57:41] 2026-01-26 14:56:37,325 | INFO     | did not find any defunct processes belonging to 17711
[2026-01-26 15:57:41] 2026-01-26 14:56:37,327 | INFO     | did not find any defunct processes belonging to 17711
[2026-01-26 15:57:41] 2026-01-26 14:56:37,327 | INFO     | ready for new job
[2026-01-26 15:57:41] 2026-01-26 14:56:37,327 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 15:57:41] 2026-01-26 14:56:37,328 | INFO     | **************************************
[2026-01-26 15:57:41] 2026-01-26 14:56:37,328 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 15:57:41] 2026-01-26 14:56:37,328 | INFO     | **************************************
[2026-01-26 15:57:41] 2026-01-26 14:56:37,328 | INFO     | 
[2026-01-26 15:57:41] 2026-01-26 14:56:37,329 | INFO     | pilot is running in a VM
[2026-01-26 15:57:41] 2026-01-26 14:56:37,329 | INFO     | architecture information:
[2026-01-26 15:57:41] 2026-01-26 14:56:37,329 | INFO     | executing command: cat /etc/os-release
[2026-01-26 15:57:41] 2026-01-26 14:56:37,342 | INFO     | cat /etc/os-release:
[2026-01-26 15:57:41] NAME="CentOS Linux"
[2026-01-26 15:57:41] VERSION="7 (Core)"
[2026-01-26 15:57:41] ID="centos"
[2026-01-26 15:57:41] ID_LIKE="rhel fedora"
[2026-01-26 15:57:41] VERSION_ID="7"
[2026-01-26 15:57:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 15:57:41] ANSI_COLOR="0;31"
[2026-01-26 15:57:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 15:57:41] HOME_URL="https://www.centos.org/"
[2026-01-26 15:57:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 15:57:41] 
[2026-01-26 15:57:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 15:57:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 15:57:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 15:57:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 15:57:41] 
[2026-01-26 15:57:41] 2026-01-26 14:56:37,342 | INFO     | **************************************
[2026-01-26 15:57:41] 2026-01-26 14:56:37,767 | WARNING  | process 17711 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 15:57:41] 2026-01-26 14:56:37,824 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 15:57:41] 2026-01-26 14:56:37,845 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2026-01-26 15:57:41] 2026-01-26 14:56:37,860 | INFO     | sufficient remaining disk space (44667240448 B)
[2026-01-26 15:57:41] 2026-01-26 14:56:37,860 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 15:57:41] 2026-01-26 14:56:37,861 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 15:57:41] 2026-01-26 14:56:37,861 | INFO     | update_server=False
[2026-01-26 15:57:41] 2026-01-26 14:56:37,861 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 15:57:41] 2026-01-26 14:56:37,861 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 15:57:41] 2026-01-26 14:56:37,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 15:57:41] 2026-01-26 14:56:37,918 | INFO     | number of running child processes to parent process 17711: 1
[2026-01-26 15:57:41] 2026-01-26 14:56:37,918 | INFO     | maximum number of monitored processes: 6
[2026-01-26 15:57:41] 2026-01-26 14:56:37,918 | INFO     | aborting job monitoring since job object (job id=6985829393) has expired
[2026-01-26 15:57:41] 2026-01-26 14:56:37,918 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 15:57:41] 2026-01-26 14:56:37,918 | INFO     | will abort loop
[2026-01-26 15:57:41] 2026-01-26 14:56:38,044 | INFO     | all job control threads have been joined
[2026-01-26 15:57:41] 2026-01-26 14:56:38,074 | INFO     | all data control threads have been joined
[2026-01-26 15:57:41] 2026-01-26 14:56:38,746 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 15:57:41] 2026-01-26 14:56:38,866 | INFO     | [job] queue monitor thread has finished
[2026-01-26 15:57:41] 2026-01-26 14:56:38,866 | INFO     | [job] retrieve thread has finished
[2026-01-26 15:57:41] 2026-01-26 14:56:38,923 | INFO     | [job] job monitor thread has finished
[2026-01-26 15:57:41] 2026-01-26 14:56:38,944 | INFO     | all payload control threads have been joined
[2026-01-26 15:57:41] 2026-01-26 14:56:39,049 | INFO     | [job] control thread has finished
[2026-01-26 15:57:41] 2026-01-26 14:56:39,079 | INFO     | [data] control thread has finished
[2026-01-26 15:57:41] 2026-01-26 14:56:39,264 | INFO     | [payload] failed_post thread has finished
[2026-01-26 15:57:41] 2026-01-26 14:56:39,950 | INFO     | [payload] control thread has finished
[2026-01-26 15:57:41] 2026-01-26 14:56:39,995 | INFO     | [job] validate thread has finished
[2026-01-26 15:57:41] 2026-01-26 14:56:39,997 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 15:57:41] 2026-01-26 14:56:40,046 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 15:57:41] 2026-01-26 14:56:40,060 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 15:57:41] 2026-01-26 14:56:40,070 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 15:57:41] 2026-01-26 14:56:40,350 | INFO     | [data] copytool_in thread has finished
[2026-01-26 15:57:41] 2026-01-26 14:56:40,376 | INFO     | [payload] validate_post thread has finished
[2026-01-26 15:57:41] 2026-01-26 14:56:40,751 | INFO     | [data] copytool_out thread has finished
[2026-01-26 15:57:41] 2026-01-26 14:56:41,867 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 15:57:41] 2026-01-26 14:57:08,532 | INFO     | PID=12805 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 15:57:41] 2026-01-26 14:57:08,532 | INFO     | .. there are 2 such processes running
[2026-01-26 15:57:41] 2026-01-26 14:57:08,532 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 15:57:41] 2026-01-26 14:57:08,532 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 15:57:41] 2026-01-26 14:57:08,532 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 15:57:41] 2026-01-26 14:57:35,346 | INFO     | [monitor] cgroup control has ended
[2026-01-26 15:57:41] 2026-01-26 14:57:36,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131232214488896)>', '<ExcThread(monitor, started 131231433873152)>']
[2026-01-26 15:57:41] 2026-01-26 14:57:36,678 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 15:57:41] 2026-01-26 14:57:36,678 | INFO     | [monitor] control thread has ended
[2026-01-26 15:57:41] 2026-01-26 14:57:41,398 | INFO     | all workflow threads have been joined
[2026-01-26 15:57:41] 2026-01-26 14:57:41,398 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 15:57:41] 2026-01-26 14:57:41,398 | INFO     | traces error code: 0
[2026-01-26 15:57:41] 2026-01-26 14:57:41,398 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 15:57:41] 2026-01-26 14:57:41,460 [wrapper] ==== pilot stdout END ====
[2026-01-26 15:57:41] 2026-01-26 14:57:41,463 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 15:57:41] 2026-01-26 14:57:41,466 [wrapper] pilotpid: 12805
[2026-01-26 15:57:41] 2026-01-26 14:57:41,469 [wrapper] Pilot exit status: 0
[2026-01-26 15:57:41] 2026-01-26 14:57:41,485 [wrapper] pandaids: 6985829393 6985829393
[2026-01-26 15:57:41] 2026-01-26 14:57:41,522 [wrapper] cleanup supervisor_pilot   33540 12808
[2026-01-26 15:57:41] 2026-01-26 14:57:41,526 [wrapper] Test setup, not cleaning
[2026-01-26 15:57:41] 2026-01-26 14:57:41,529 [wrapper] apfmon messages muted
[2026-01-26 15:57:41] 2026-01-26 14:57:41,532 [wrapper] ==== wrapper stdout END ====
[2026-01-26 15:57:41] 2026-01-26 14:57:41,535 [wrapper] ==== wrapper stderr END ====
[2026-01-26 15:57:41]  *** Error codes and diagnostics ***
[2026-01-26 15:57:41]     "exeErrorCode": 0,
[2026-01-26 15:57:41]     "exeErrorDiag": "",
[2026-01-26 15:57:41]     "pilotErrorCode": 0,
[2026-01-26 15:57:41]     "pilotErrorDiag": "",
[2026-01-26 15:57:41]  *** Listing of results directory ***
[2026-01-26 15:57:41] insgesamt 959648
[2026-01-26 15:57:41] drwx------ 5 yeti boinc      4096 Jan 14 10:54 pilot3
[2026-01-26 15:57:41] -rw-r--r-- 1 yeti boinc    621528 Jan 14 12:27 pilot3.tar.gz
[2026-01-26 15:57:41] -rwx------ 1 yeti boinc     36322 Jan 26 08:37 runpilot2-wrapper.sh
[2026-01-26 15:57:41] -rw-r--r-- 1 yeti boinc      5111 Jan 26 08:37 queuedata.json
[2026-01-26 15:57:41] -rw-r--r-- 1 yeti boinc       100 Jan 26 12:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 15:57:41] -rwxr-xr-x 1 yeti boinc      7986 Jan 26 12:13 run_atlas
[2026-01-26 15:57:41] -rw-r--r-- 1 yeti boinc       105 Jan 26 12:13 job.xml
[2026-01-26 15:57:41] -rw-r--r-- 3 yeti boinc 317452048 Jan 26 12:13 EVNT.48312993._000014.pool.root.1
[2026-01-26 15:57:41] -rw-r--r-- 3 yeti boinc 317452048 Jan 26 12:13 ATLAS.root_0
[2026-01-26 15:57:41] -rw-r--r-- 2 yeti boinc     15845 Jan 26 12:13 start_atlas.sh
[2026-01-26 15:57:41] drwxrwx--x 2 yeti boinc      4096 Jan 26 12:13 shared
[2026-01-26 15:57:41] -rw-r--r-- 2 yeti boinc    634139 Jan 26 12:13 input.tar.gz
[2026-01-26 15:57:41] -rw-r--r-- 1 yeti boinc         0 Jan 26 12:13 boinc_setup_complete
[2026-01-26 15:57:41] -rw-r--r-- 1 yeti boinc         0 Jan 26 12:13 boinc_lockfile
[2026-01-26 15:57:41] -rw-r--r-- 1 yeti boinc      6567 Jan 26 13:36 init_data.xml
[2026-01-26 15:57:41] -rw-r--r-- 1 yeti boinc      2641 Jan 26 13:36 pandaJob.out
[2026-01-26 15:57:41] -rw------- 1 yeti boinc        52 Jan 26 13:36 setup.sh.local
[2026-01-26 15:57:41] -rw------- 1 yeti boinc   1002189 Jan 26 13:36 agis_schedconf.cvmfs.json
[2026-01-26 15:57:41] -rw------- 1 yeti boinc       423 Jan 26 13:36 workernode_map.json
[2026-01-26 15:57:41] -rw------- 1 yeti boinc 340533424 Jan 26 15:56 HITS.48312995._000390.pool.root.1
[2026-01-26 15:57:41] -rw-r--r-- 1 yeti boinc       532 Jan 26 15:56 boinc_task_state.xml
[2026-01-26 15:57:41] -rw------- 1 yeti boinc      1023 Jan 26 15:56 memory_monitor_summary.json
[2026-01-26 15:57:41] -rw------- 1 yeti boinc   1516246 Jan 26 15:56 agis_ddmendpoints.agis.ALL.json
[2026-01-26 15:57:41] -rw------- 1 yeti boinc    348819 Jan 26 15:56 log.48312995._000390.job.log.tgz.1
[2026-01-26 15:57:41] -rw------- 1 yeti boinc      6289 Jan 26 15:56 heartbeat.json
[2026-01-26 15:57:41] -rw------- 1 yeti boinc        96 Jan 26 15:56 pilot_heartbeat.json
[2026-01-26 15:57:41] -rw-r--r-- 1 yeti boinc        28 Jan 26 15:57 wrapper_checkpoint.txt
[2026-01-26 15:57:41] -rw-r--r-- 1 yeti boinc      8192 Jan 26 15:57 boinc_mmap_file
[2026-01-26 15:57:41] -rw------- 1 yeti boinc      5424 Jan 26 15:57 pilotlog.txt
[2026-01-26 15:57:41] -rw------- 1 yeti boinc   1257494 Jan 26 15:57 log.48312995._000390.job.log.1
[2026-01-26 15:57:41] -rw------- 1 yeti boinc       357 Jan 26 15:57 output.list
[2026-01-26 15:57:41] -rw-r--r-- 1 yeti boinc       620 Jan 26 15:57 runtime_log
[2026-01-26 15:57:41] -rw------- 1 yeti boinc   1628160 Jan 26 15:57 result.tar.gz
[2026-01-26 15:57:41] -rw-r--r-- 1 yeti boinc      9628 Jan 26 15:57 runtime_log.err
[2026-01-26 15:57:41] -rw------- 1 yeti boinc       769 Jan 26 15:57 27WMDmKLW48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsH9KDmiLrh0n.diag
[2026-01-26 15:57:41] -rw-r--r-- 1 yeti boinc     22726 Jan 26 15:57 stderr.txt
[2026-01-26 15:57:41] HITS file was successfully produced:
[2026-01-26 15:57:41] -rw------- 1 yeti boinc 340533424 Jan 26 15:56 shared/HITS.pool.root.1
[2026-01-26 15:57:41]  *** Contents of shared directory: ***
[2026-01-26 15:57:41] insgesamt 644804
[2026-01-26 15:57:41] -rw-r--r-- 3 yeti boinc 317452048 Jan 26 12:13 ATLAS.root_0
[2026-01-26 15:57:41] -rw-r--r-- 2 yeti boinc     15845 Jan 26 12:13 start_atlas.sh
[2026-01-26 15:57:41] -rw-r--r-- 2 yeti boinc    634139 Jan 26 12:13 input.tar.gz
[2026-01-26 15:57:41] -rw------- 1 yeti boinc 340533424 Jan 26 15:56 HITS.pool.root.1
[2026-01-26 15:57:41] -rw------- 1 yeti boinc   1628160 Jan 26 15:57 result.tar.gz
15:57:43 (3906): run_atlas exited; CPU time 32473.324672
15:57:43 (3906): called boinc_finish(0)

</stderr_txt>
]]>

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