Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:36:55 (2275129): wrapper (7.7.26015): starting
19:36:55 (2275129): wrapper: running run_atlas (--nthreads 2)
[2026-01-26 19:36:55] Arguments: --nthreads 2
[2026-01-26 19:36:55] Threads: 2
[2026-01-26 19:36:55] Checking for CVMFS
[2026-01-26 19:36:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 19:36:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 19:36:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 19:36:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 19:36:56] 2.9.2.0 1374182 8705 68000 155556 2 50 23666143 36864000 0 130560 0 2443851 99.980 277559 7177 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 19:36:56] CVMFS is ok
[2026-01-26 19:36:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 19:36:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 19:36:56] Further information can be found at the LHC@home message board.
[2026-01-26 19:36:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 19:36:56] Checking for apptainer binary...
[2026-01-26 19:36:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 19:36:56] Running /usr/bin/apptainer --version
[2026-01-26 19:36:56] apptainer version 1.4.1-1.1
[2026-01-26 19:36:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 19:36:56] thA310
[2026-01-26 19:36:56] apptainer works
[2026-01-26 19:36:56] Set ATHENA_PROC_NUMBER=2
[2026-01-26 19:36:56] Set ATHENA_CORE_NUMBER=2
[2026-01-26 19:36:56] Starting ATLAS job with PandaID=6983772612
[2026-01-26 19:36:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 21:50:32]  *** The last 200 lines of the pilot log: ***
[2026-01-26 21:50:32] 2026-01-26 20:49:43,543 | INFO     | --- collectZombieJob: --- 10, [2283570]
[2026-01-26 21:50:32] 2026-01-26 20:49:43,543 | INFO     | zombie collector waiting for pid 2283570
[2026-01-26 21:50:32] 2026-01-26 20:49:43,544 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 21:50:32] 2026-01-26 20:49:43,544 | INFO     | collected zombie processes
[2026-01-26 21:50:32] 2026-01-26 20:49:43,544 | INFO     | will attempt to kill all subprocesses of pid=2283570
[2026-01-26 21:50:32] 2026-01-26 20:49:43,583 | INFO     | process IDs to be killed: [2283570] (in reverse order)
[2026-01-26 21:50:32] 2026-01-26 20:49:43,606 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 21:50:32] 2026-01-26 20:49:43,606 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 21:50:32] 2026-01-26 20:49:43,607 | INFO     | did not find any defunct processes belonging to 2283570
[2026-01-26 21:50:32] 2026-01-26 20:49:43,608 | INFO     | did not find any defunct processes belonging to 2283570
[2026-01-26 21:50:32] 2026-01-26 20:49:43,608 | INFO     | ready for new job
[2026-01-26 21:50:32] 2026-01-26 20:49:43,608 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 21:50:32] 2026-01-26 20:49:43,609 | INFO     | **************************************
[2026-01-26 21:50:32] 2026-01-26 20:49:43,609 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 21:50:32] 2026-01-26 20:49:43,609 | INFO     | **************************************
[2026-01-26 21:50:32] 2026-01-26 20:49:43,609 | INFO     | 
[2026-01-26 21:50:32] 2026-01-26 20:49:43,609 | INFO     | architecture information:
[2026-01-26 21:50:32] 2026-01-26 20:49:43,609 | INFO     | executing command: cat /etc/os-release
[2026-01-26 21:50:32] 2026-01-26 20:49:43,617 | INFO     | cat /etc/os-release:
[2026-01-26 21:50:32] NAME="CentOS Linux"
[2026-01-26 21:50:32] VERSION="7 (Core)"
[2026-01-26 21:50:32] ID="centos"
[2026-01-26 21:50:32] ID_LIKE="rhel fedora"
[2026-01-26 21:50:32] VERSION_ID="7"
[2026-01-26 21:50:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 21:50:32] ANSI_COLOR="0;31"
[2026-01-26 21:50:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 21:50:32] HOME_URL="https://www.centos.org/"
[2026-01-26 21:50:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 21:50:32] 
[2026-01-26 21:50:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 21:50:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 21:50:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 21:50:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 21:50:32] 
[2026-01-26 21:50:32] 2026-01-26 20:49:43,617 | INFO     | **************************************
[2026-01-26 21:50:32] 2026-01-26 20:49:44,120 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 21:50:32] 2026-01-26 20:49:44,132 | INFO     | sufficient remaining disk space (498977472512 B)
[2026-01-26 21:50:32] 2026-01-26 20:49:44,133 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 21:50:32] 2026-01-26 20:49:44,133 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 21:50:32] 2026-01-26 20:49:44,133 | INFO     | update_server=False
[2026-01-26 21:50:32] 2026-01-26 20:49:44,133 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 21:50:32] 2026-01-26 20:49:44,133 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 21:50:32] 2026-01-26 20:49:44,133 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:50:32] 2026-01-26 20:49:44,133 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:50:32] 2026-01-26 20:49:44,133 | INFO     | aborting loop
[2026-01-26 21:50:32] 2026-01-26 20:49:44,400 | INFO     | all payload control threads have been joined
[2026-01-26 21:50:32] 2026-01-26 20:49:44,425 | INFO     | all job control threads have been joined
[2026-01-26 21:50:32] 2026-01-26 20:49:44,490 | INFO     | all data control threads have been joined
[2026-01-26 21:50:32] 2026-01-26 20:49:44,711 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 21:50:32] 2026-01-26 20:49:45,139 | INFO     | [job] retrieve thread has finished
[2026-01-26 21:50:32] 2026-01-26 20:49:45,139 | INFO     | [job] queue monitor thread has finished
[2026-01-26 21:50:32] 2026-01-26 20:49:45,140 | INFO     | [job] job monitor thread has finished
[2026-01-26 21:50:32] 2026-01-26 20:49:45,161 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 21:50:32] 2026-01-26 20:49:45,176 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 21:50:32] 2026-01-26 20:49:45,406 | INFO     | [payload] control thread has finished
[2026-01-26 21:50:32] 2026-01-26 20:49:45,431 | INFO     | [job] control thread has finished
[2026-01-26 21:50:32] 2026-01-26 20:49:45,496 | INFO     | [data] control thread has finished
[2026-01-26 21:50:32] 2026-01-26 20:49:45,607 | INFO     | [payload] validate_post thread has finished
[2026-01-26 21:50:32] 2026-01-26 20:49:45,846 | INFO     | [payload] failed_post thread has finished
[2026-01-26 21:50:32] 2026-01-26 20:49:46,533 | INFO     | [job] validate thread has finished
[2026-01-26 21:50:32] 2026-01-26 20:49:46,608 | INFO     | [data] copytool_in thread has finished
[2026-01-26 21:50:32] 2026-01-26 20:49:46,609 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 21:50:32] 2026-01-26 20:49:46,718 | INFO     | [data] copytool_out thread has finished
[2026-01-26 21:50:32] 2026-01-26 20:49:48,139 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 21:50:32] 2026-01-26 20:49:55,066 | INFO     | job.realtimelogging is not enabled
[2026-01-26 21:50:32] 2026-01-26 20:49:56,072 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 21:50:32] 2026-01-26 20:50:14,720 | INFO     | PID=2279159 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 21:50:32] 2026-01-26 20:50:14,720 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 21:50:32] 2026-01-26 20:50:14,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 21:50:32] 2026-01-26 20:50:14,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 21:50:32] 2026-01-26 20:50:27,560 | INFO     | [monitor] cgroup control has ended
[2026-01-26 21:50:32] 2026-01-26 20:50:27,601 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140518226831168)>', '<ExcThread(monitor, started 140517413209856)>']
[2026-01-26 21:50:32] 2026-01-26 20:50:27,786 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 21:50:32] 2026-01-26 20:50:27,787 | INFO     | [monitor] control thread has ended
[2026-01-26 21:50:32] 2026-01-26 20:50:32,627 | INFO     | all workflow threads have been joined
[2026-01-26 21:50:32] 2026-01-26 20:50:32,628 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 21:50:32] 2026-01-26 20:50:32,628 | INFO     | traces error code: 0
[2026-01-26 21:50:32] 2026-01-26 20:50:32,629 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 21:50:32] 2026-01-26 20:50:32,672 [wrapper] ==== pilot stdout END ====
[2026-01-26 21:50:32] 2026-01-26 20:50:32,675 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 21:50:32] 2026-01-26 20:50:32,677 [wrapper] pilotpid: 2279159
[2026-01-26 21:50:32] 2026-01-26 20:50:32,679 [wrapper] Pilot exit status: 0
[2026-01-26 21:50:32] 2026-01-26 20:50:32,685 [wrapper] pandaids: 6983772612
[2026-01-26 21:50:32] 2026-01-26 20:50:32,698 [wrapper] cleanup supervisor_pilot 2289359 2279160
[2026-01-26 21:50:32] 2026-01-26 20:50:32,700 [wrapper] Test setup, not cleaning
[2026-01-26 21:50:32] 2026-01-26 20:50:32,702 [wrapper] apfmon messages muted
[2026-01-26 21:50:32] 2026-01-26 20:50:32,704 [wrapper] ==== wrapper stdout END ====
[2026-01-26 21:50:32] 2026-01-26 20:50:32,706 [wrapper] ==== wrapper stderr END ====
[2026-01-26 21:50:32]  *** Error codes and diagnostics ***
[2026-01-26 21:50:32]     "exeErrorCode": 0,
[2026-01-26 21:50:32]     "exeErrorDiag": "",
[2026-01-26 21:50:32]     "pilotErrorCode": 0,
[2026-01-26 21:50:32]     "pilotErrorDiag": "",
[2026-01-26 21:50:32]  *** Listing of results directory ***
[2026-01-26 21:50:33] total 677368
[2026-01-26 21:50:33] -rw-r--r-- 1 boinc boinc    584422 Jan 26 04:16 pilot3.tar.gz
[2026-01-26 21:50:33] -rw-r--r-- 1 boinc boinc      5111 Jan 26 04:17 queuedata.json
[2026-01-26 21:50:33] -rwx------ 1 boinc boinc     36322 Jan 26 04:17 runpilot2-wrapper.sh
[2026-01-26 21:50:33] -rw-r--r-- 1 boinc boinc       100 Jan 26 19:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 21:50:33] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 19:36 run_atlas
[2026-01-26 21:50:33] -rw-r--r-- 1 boinc boinc       105 Jan 26 19:36 job.xml
[2026-01-26 21:50:33] -rw-r--r-- 2 boinc boinc 501471148 Jan 26 19:36 EVNT.48317869._000038.pool.root.1
[2026-01-26 21:50:33] -rw-r--r-- 2 boinc boinc    597754 Jan 26 19:36 input.tar.gz
[2026-01-26 21:50:33] -rw-r--r-- 2 boinc boinc     15845 Jan 26 19:36 start_atlas.sh
[2026-01-26 21:50:33] drwxrwx--x 2 boinc boinc      4096 Jan 26 19:36 shared
[2026-01-26 21:50:33] -rw-r--r-- 1 boinc boinc         0 Jan 26 19:36 boinc_setup_complete
[2026-01-26 21:50:33] -rw-r--r-- 1 boinc boinc      6206 Jan 26 19:36 init_data.xml
[2026-01-26 21:50:33] -rw-r--r-- 1 boinc boinc         0 Jan 26 19:36 boinc_lockfile
[2026-01-26 21:50:33] -rw-r--r-- 1 boinc boinc      2513 Jan 26 19:36 pandaJob.out
[2026-01-26 21:50:33] -rw------- 1 boinc boinc   1006384 Jan 26 19:37 agis_schedconf.cvmfs.json
[2026-01-26 21:50:33] -rw------- 1 boinc boinc   1516246 Jan 26 19:37 agis_ddmendpoints.agis.ALL.json
[2026-01-26 21:50:33] -rw------- 1 boinc boinc       426 Jan 26 19:37 workernode_map.json
[2026-01-26 21:50:33] drwx------ 5 boinc boinc      4096 Jan 26 19:37 pilot3
[2026-01-26 21:50:33] -rw------- 1 boinc boinc 185410638 Jan 26 21:49 HITS.48317872._001867.pool.root.1
[2026-01-26 21:50:33] -rw-r--r-- 1 boinc boinc       531 Jan 26 21:49 boinc_task_state.xml
[2026-01-26 21:50:33] -rw------- 1 boinc boinc      1014 Jan 26 21:49 memory_monitor_summary.json
[2026-01-26 21:50:33] -rw------- 1 boinc boinc    270263 Jan 26 21:49 log.48317872._001867.job.log.tgz.1
[2026-01-26 21:50:33] -rw------- 1 boinc boinc      6298 Jan 26 21:49 heartbeat.json
[2026-01-26 21:50:33] -rw------- 1 boinc boinc        95 Jan 26 21:50 pilot_heartbeat.json
[2026-01-26 21:50:33] -rw-r--r-- 1 boinc boinc        27 Jan 26 21:50 wrapper_checkpoint.txt
[2026-01-26 21:50:33] -rw-r--r-- 1 boinc boinc      8192 Jan 26 21:50 boinc_mmap_file
[2026-01-26 21:50:33] -rw------- 1 boinc boinc      4820 Jan 26 21:50 pilotlog.txt
[2026-01-26 21:50:33] -rw------- 1 boinc boinc   1138638 Jan 26 21:50 log.48317872._001867.job.log.1
[2026-01-26 21:50:33] -rw------- 1 boinc boinc       357 Jan 26 21:50 output.list
[2026-01-26 21:50:33] -rw-r--r-- 1 boinc boinc       620 Jan 26 21:50 runtime_log
[2026-01-26 21:50:33] -rw------- 1 boinc boinc   1423360 Jan 26 21:50 result.tar.gz
[2026-01-26 21:50:33] -rw-r--r-- 1 boinc boinc      8896 Jan 26 21:50 runtime_log.err
[2026-01-26 21:50:33] -rw------- 1 boinc boinc       657 Jan 26 21:50 nIwLDmwHS48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYK2KDmDp3BHo.diag
[2026-01-26 21:50:33] -rw-r--r-- 1 boinc boinc     10704 Jan 26 21:50 stderr.txt
[2026-01-26 21:50:33] HITS file was successfully produced:
[2026-01-26 21:50:33] -rw------- 1 boinc boinc 185410638 Jan 26 21:49 shared/HITS.pool.root.1
[2026-01-26 21:50:33]  *** Contents of shared directory: ***
[2026-01-26 21:50:33] total 672788
[2026-01-26 21:50:33] -rw-r--r-- 2 boinc boinc 501471148 Jan 26 19:36 ATLAS.root_0
[2026-01-26 21:50:33] -rw-r--r-- 2 boinc boinc    597754 Jan 26 19:36 input.tar.gz
[2026-01-26 21:50:33] -rw-r--r-- 2 boinc boinc     15845 Jan 26 19:36 start_atlas.sh
[2026-01-26 21:50:33] -rw------- 1 boinc boinc 185410638 Jan 26 21:49 HITS.pool.root.1
[2026-01-26 21:50:33] -rw------- 1 boinc boinc   1423360 Jan 26 21:50 result.tar.gz
21:50:34 (2275129): run_atlas exited; CPU time 15517.953561
21:50:34 (2275129): called boinc_finish(0)

</stderr_txt>
]]>

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