Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:00:42 (3711): wrapper (7.7.26015): starting
06:00:42 (3711): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 06:00:42] Arguments: --nthreads 8
[2026-01-26 06:00:42] Threads: 8
[2026-01-26 06:00:42] Checking for CVMFS
[2026-01-26 06:00:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 06:00:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 06:00:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 06:00:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 06:00:43] 2.11.2.0 12825 205412 145736 155543 3 50 14038251 18432001 1833 130560 0 135130967 99.982 7499043 24995 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 06:00:43] CVMFS is ok
[2026-01-26 06:00:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 06:00:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 06:00:43] Further information can be found at the LHC@home message board.
[2026-01-26 06:00:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 06:00:43] Checking for apptainer binary...
[2026-01-26 06:00:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 06:00:43] Running /usr/bin/apptainer --version
[2026-01-26 06:00:43] apptainer version 1.3.2-1.el7
[2026-01-26 06:00:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 06:00:44] c-206-8.aglt2.org
[2026-01-26 06:00:44] apptainer works
[2026-01-26 06:00:44] Set ATHENA_PROC_NUMBER=8
[2026-01-26 06:00:44] Set ATHENA_CORE_NUMBER=8
[2026-01-26 06:00:44] Starting ATLAS job with PandaID=6983772389
[2026-01-26 06:00:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 08:59:21]  *** The last 200 lines of the pilot log: ***
[2026-01-26 08:59:21] 2026-01-26 13:58:41,257 | INFO     | mean x: 1769430587.0
[2026-01-26 08:59:21] 2026-01-26 13:58:41,257 | INFO     | mean y: 2452678.754285714
[2026-01-26 08:59:21] 2026-01-26 13:58:41,258 | INFO     | intersect: -18759109723.932312
[2026-01-26 08:59:21] 2026-01-26 13:58:41,258 | INFO     | chi2: 2.0818692401697723
[2026-01-26 08:59:21] 2026-01-26 13:58:41,259 | INFO     | sum of square deviations: 1523386702.5
[2026-01-26 08:59:21] 2026-01-26 13:58:41,260 | INFO     | sum of deviations: 28461770186.500008
[2026-01-26 08:59:21] 2026-01-26 13:58:41,260 | INFO     | mean x: 1769430434.5
[2026-01-26 08:59:21] 2026-01-26 13:58:41,261 | INFO     | mean y: 2464328.005882353
[2026-01-26 08:59:21] 2026-01-26 13:58:41,261 | INFO     | intersect: -33056195239.582047
[2026-01-26 08:59:21] 2026-01-26 13:58:41,261 | INFO     | chi2: 1.2969862459736434
[2026-01-26 08:59:21] 2026-01-26 13:58:41,261 | INFO     | current chi2=1.2969862459736434 (change=37.70087856872909 %)
[2026-01-26 08:59:21] 2026-01-26 13:58:41,262 | INFO     | sum of square deviations: 1392881930.0
[2026-01-26 08:59:21] 2026-01-26 13:58:41,263 | INFO     | sum of deviations: 27502188732.999996
[2026-01-26 08:59:21] 2026-01-26 13:58:41,263 | INFO     | mean x: 1769430282.0
[2026-01-26 08:59:21] 2026-01-26 13:58:41,263 | INFO     | mean y: 2463206.375757576
[2026-01-26 08:59:21] 2026-01-26 13:58:41,264 | INFO     | intersect: -34934601104.20038
[2026-01-26 08:59:21] 2026-01-26 13:58:41,264 | INFO     | chi2: 1.2974232966718353
[2026-01-26 08:59:21] 2026-01-26 13:58:41,264 | INFO     | current chi2=1.2974232966718353 (change=-0.033697404236063815 %)
[2026-01-26 08:59:21] 2026-01-26 13:58:41,264 | INFO     | right removable region: 164
[2026-01-26 08:59:21] 2026-01-26 13:58:41,265 | INFO     | sum of square deviations: 1523386702.5
[2026-01-26 08:59:21] 2026-01-26 13:58:41,266 | INFO     | sum of deviations: -5576124222.499998
[2026-01-26 08:59:21] 2026-01-26 13:58:41,266 | INFO     | mean x: 1769430739.5
[2026-01-26 08:59:21] 2026-01-26 13:58:41,267 | INFO     | mean y: 2477862.688235294
[2026-01-26 08:59:21] 2026-01-26 13:58:41,267 | INFO     | intersect: 6479208682.492693
[2026-01-26 08:59:21] 2026-01-26 13:58:41,267 | INFO     | chi2: 0.8280220808459982
[2026-01-26 08:59:21] 2026-01-26 13:58:41,267 | INFO     | current chi2=0.8280220808459982 (change=60.22698905054793 %)
[2026-01-26 08:59:21] 2026-01-26 13:58:41,268 | INFO     | sum of square deviations: 1392881930.0
[2026-01-26 08:59:21] 2026-01-26 13:58:41,269 | INFO     | sum of deviations: -8449172586.000001
[2026-01-26 08:59:21] 2026-01-26 13:58:41,270 | INFO     | mean x: 1769430892.0
[2026-01-26 08:59:21] 2026-01-26 13:58:41,270 | INFO     | mean y: 2481213.909090909
[2026-01-26 08:59:21] 2026-01-26 13:58:41,270 | INFO     | intersect: 10735786502.39677
[2026-01-26 08:59:21] 2026-01-26 13:58:41,270 | INFO     | chi2: 0.8053330720368473
[2026-01-26 08:59:21] 2026-01-26 13:58:41,271 | INFO     | current chi2=0.8053330720368473 (change=2.740145381868227 %)
[2026-01-26 08:59:21] 2026-01-26 13:58:41,271 | INFO     | left removable region: 20
[2026-01-26 08:59:21] 2026-01-26 13:58:41,271 | INFO     | sum of square deviations: 925859220.0
[2026-01-26 08:59:21] 2026-01-26 13:58:41,272 | INFO     | sum of deviations: 1685029504.5
[2026-01-26 08:59:21] 2026-01-26 13:58:41,272 | INFO     | mean x: 1769430861.5
[2026-01-26 08:59:21] 2026-01-26 13:58:41,273 | INFO     | mean y: 2495142.6041666665
[2026-01-26 08:59:21] 2026-01-26 13:58:41,273 | INFO     | intersect: -3217803519.864576
[2026-01-26 08:59:21] 2026-01-26 13:58:41,273 | INFO     | chi2: 9.525185398613762e-05
[2026-01-26 08:59:21] 2026-01-26 13:58:41,273 | INFO     | current memory leak: 1.82 B/s (using 144 data points, chi2=0.00)
[2026-01-26 08:59:21] 2026-01-26 13:58:41,274 | INFO     | could have reported an average CPU frequency of 2461 MHz (9 samples)
[2026-01-26 08:59:21] 2026-01-26 13:58:41,274 | INFO     | ..............................
[2026-01-26 08:59:21] 2026-01-26 13:58:41,274 | INFO     | . Timing measurements:
[2026-01-26 08:59:21] 2026-01-26 13:58:41,275 | INFO     | . get job = 0 s
[2026-01-26 08:59:21] 2026-01-26 13:58:41,275 | INFO     | . initial setup = 6 s
[2026-01-26 08:59:21] 2026-01-26 13:58:41,275 | INFO     | . payload setup = 4 s
[2026-01-26 08:59:21] 2026-01-26 13:58:41,275 | INFO     | . stage-in = 0 s
[2026-01-26 08:59:21] 2026-01-26 13:58:41,275 | INFO     | . payload execution = 10638 s
[2026-01-26 08:59:21] 2026-01-26 13:58:41,275 | INFO     | . stage-out = 1 s
[2026-01-26 08:59:21] 2026-01-26 13:58:41,276 | INFO     | . log creation = 0 s
[2026-01-26 08:59:21] 2026-01-26 13:58:41,276 | INFO     | ..............................
[2026-01-26 08:59:21] 2026-01-26 13:58:41,430 | INFO     | 
[2026-01-26 08:59:21] 2026-01-26 13:58:41,430 | INFO     | job summary report
[2026-01-26 08:59:21] 2026-01-26 13:58:41,430 | INFO     | --------------------------------------------------
[2026-01-26 08:59:21] 2026-01-26 13:58:41,430 | INFO     | PanDA job id: 6983772389
[2026-01-26 08:59:21] 2026-01-26 13:58:41,430 | INFO     | task id: 48317872
[2026-01-26 08:59:21] 2026-01-26 13:58:41,431 | INFO     | errors: (none)
[2026-01-26 08:59:21] 2026-01-26 13:58:41,431 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 08:59:21] 2026-01-26 13:58:41,431 | INFO     | pilot state: finished 
[2026-01-26 08:59:21] 2026-01-26 13:58:41,431 | INFO     | transexitcode: 0
[2026-01-26 08:59:21] 2026-01-26 13:58:41,431 | INFO     | exeerrorcode: 0
[2026-01-26 08:59:21] 2026-01-26 13:58:41,431 | INFO     | exeerrordiag: 
[2026-01-26 08:59:21] 2026-01-26 13:58:41,432 | INFO     | exitcode: 0
[2026-01-26 08:59:21] 2026-01-26 13:58:41,432 | INFO     | exitmsg: OK
[2026-01-26 08:59:21] 2026-01-26 13:58:41,432 | INFO     | cpuconsumptiontime: 79978 s
[2026-01-26 08:59:21] 2026-01-26 13:58:41,432 | INFO     | nevents: 400
[2026-01-26 08:59:21] 2026-01-26 13:58:41,432 | INFO     | neventsw: 0
[2026-01-26 08:59:21] 2026-01-26 13:58:41,432 | INFO     | pid: 12178
[2026-01-26 08:59:21] 2026-01-26 13:58:41,433 | INFO     | pgrp: 12178
[2026-01-26 08:59:21] 2026-01-26 13:58:41,433 | INFO     | corecount: 8
[2026-01-26 08:59:21] 2026-01-26 13:58:41,433 | INFO     | event service: False
[2026-01-26 08:59:21] 2026-01-26 13:58:41,433 | INFO     | sizes: {0: 2284026, 1: 2284232, 11: 2284260, 10646: 2313298, 10647: 2313297, 10649: 2322351, 10650: 2322535, 10651: 2322793}
[2026-01-26 08:59:21] 2026-01-26 13:58:41,433 | INFO     | --------------------------------------------------
[2026-01-26 08:59:21] 2026-01-26 13:58:41,433 | INFO     | 
[2026-01-26 08:59:21] 2026-01-26 13:58:41,434 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 08:59:21] 2026-01-26 13:58:41,454 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 08:59:21] 2026-01-26 13:58:41,454 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 08:59:21] 2026-01-26 13:58:41,454 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 08:59:21] 2026-01-26 13:58:41,454 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 08:59:21] 2026-01-26 13:58:41,455 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 08:59:21] 2026-01-26 13:58:41,455 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 08:59:21] 2026-01-26 13:58:41,455 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 08:59:21] 2026-01-26 13:58:41,455 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 08:59:21] 2026-01-26 13:58:41,455 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 08:59:21] 2026-01-26 13:58:41,455 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 08:59:21] 2026-01-26 13:58:41,456 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 08:59:21] 2026-01-26 13:58:41,456 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 08:59:21] 2026-01-26 13:58:41,456 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 08:59:21] 2026-01-26 13:58:41,456 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 08:59:21] 2026-01-26 13:58:41,456 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 08:59:21] 2026-01-26 13:58:41,457 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 08:59:21] 2026-01-26 13:58:41,457 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 08:59:21] 2026-01-26 13:58:41,457 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 08:59:21] 2026-01-26 13:58:41,457 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 08:59:21] 2026-01-26 13:58:41,457 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 08:59:21] 2026-01-26 13:58:41,458 | INFO     | job 6983772389 has completed (purged errors)
[2026-01-26 08:59:21] 2026-01-26 13:58:41,458 | INFO     | overall cleanup function is called
[2026-01-26 08:59:21] 2026-01-26 13:58:41,624 | WARNING  | process 12178 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 08:59:21] 2026-01-26 13:58:41,758 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 08:59:21] 2026-01-26 13:58:41,759 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 08:59:21] 2026-01-26 13:58:41,759 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 08:59:21] 2026-01-26 13:58:41,759 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 08:59:21] 2026-01-26 13:58:41,760 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-6983772389/payload.stdout) since it has not been created yet
[2026-01-26 08:59:21] 2026-01-26 13:58:41,760 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 08:59:21] 2026-01-26 13:58:41,774 | INFO     | sufficient remaining disk space (26350714880 B)
[2026-01-26 08:59:21] 2026-01-26 13:58:41,774 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-26 08:59:21] 2026-01-26 13:58:41,774 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6983772389/HITS.48317872._001644.pool.root.1 since it does not exist
[2026-01-26 08:59:21] 2026-01-26 13:58:41,878 | INFO     | number of running child processes to parent process 12178: 1
[2026-01-26 08:59:21] 2026-01-26 13:58:41,878 | INFO     | maximum number of monitored processes: 6
[2026-01-26 08:59:21] 2026-01-26 13:58:41,878 | INFO     | aborting job monitoring since job object (job id=6983772389) has expired
[2026-01-26 08:59:21] 2026-01-26 13:58:42,466 | INFO     | --- collectZombieJob: --- 10, [12178]
[2026-01-26 08:59:21] 2026-01-26 13:58:42,466 | INFO     | zombie collector waiting for pid 12178
[2026-01-26 08:59:21] 2026-01-26 13:58:42,466 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 08:59:21] 2026-01-26 13:58:42,466 | INFO     | collected zombie processes
[2026-01-26 08:59:21] 2026-01-26 13:58:42,466 | INFO     | will attempt to kill all subprocesses of pid=12178
[2026-01-26 08:59:21] 2026-01-26 13:58:42,570 | INFO     | process IDs to be killed: [12178] (in reverse order)
[2026-01-26 08:59:21] 2026-01-26 13:58:42,631 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 08:59:21] 2026-01-26 13:58:42,631 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 08:59:21] 2026-01-26 13:58:42,633 | INFO     | did not find any defunct processes belonging to 12178
[2026-01-26 08:59:21] 2026-01-26 13:58:42,639 | INFO     | did not find any defunct processes belonging to 12178
[2026-01-26 08:59:21] 2026-01-26 13:58:42,639 | INFO     | ready for new job
[2026-01-26 08:59:21] 2026-01-26 13:58:42,639 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 08:59:21] 2026-01-26 13:58:42,641 | INFO     | **************************************
[2026-01-26 08:59:21] 2026-01-26 13:58:42,642 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 08:59:21] 2026-01-26 13:58:42,642 | INFO     | **************************************
[2026-01-26 08:59:21] 2026-01-26 13:58:42,642 | INFO     | 
[2026-01-26 08:59:21] 2026-01-26 13:58:42,643 | INFO     | architecture information:
[2026-01-26 08:59:21] 2026-01-26 13:58:42,644 | INFO     | executing command: cat /etc/os-release
[2026-01-26 08:59:21] 2026-01-26 13:58:42,657 | INFO     | cat /etc/os-release:
[2026-01-26 08:59:21] NAME="CentOS Linux"
[2026-01-26 08:59:21] VERSION="7 (Core)"
[2026-01-26 08:59:21] ID="centos"
[2026-01-26 08:59:21] ID_LIKE="rhel fedora"
[2026-01-26 08:59:21] VERSION_ID="7"
[2026-01-26 08:59:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 08:59:21] ANSI_COLOR="0;31"
[2026-01-26 08:59:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 08:59:21] HOME_URL="https://www.centos.org/"
[2026-01-26 08:59:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 08:59:21] 
[2026-01-26 08:59:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 08:59:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 08:59:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 08:59:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 08:59:21] 
[2026-01-26 08:59:21] 2026-01-26 13:58:42,658 | INFO     | **************************************
[2026-01-26 08:59:21] 2026-01-26 13:58:43,160 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 08:59:21] 2026-01-26 13:58:43,174 | INFO     | sufficient remaining disk space (26351763456 B)
[2026-01-26 08:59:21] 2026-01-26 13:58:43,175 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 08:59:21] 2026-01-26 13:58:43,175 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 08:59:21] 2026-01-26 13:58:43,175 | INFO     | update_server=False
[2026-01-26 08:59:21] 2026-01-26 13:58:43,175 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 08:59:21] 2026-01-26 13:58:43,176 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 08:59:21] 2026-01-26 13:58:43,176 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 08:59:21] 2026-01-26 13:58:43,176 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 08:59:21] 2026-01-26 13:58:43,176 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 08:59:21] 2026-01-26 13:58:43,177 | INFO     | aborting loop
[2026-01-26 08:59:21] 2026-01-26 13:58:43,951 | INFO     | all data control threads have been joined
[2026-01-26 08:59:21] 2026-01-26 13:58:44,087 | INFO     | all job control threads have been joined
[2026-01-26 08:59:21] 2026-01-26 13:58:44,181 | INFO     | [job] retrieve thread has finished
[2026-01-26 08:59:21] 2026-01-26 13:58:44,182 | INFO     | [job] queue monitor thread has finished
[2026-01-26 08:59:21] 2026-01-26 13:58:44,182 | INFO     | [job] job monitor thread has finished
[2026-01-26 08:59:21] 2026-01-26 13:58:44,235 | INFO     | all payload control threads have been joined
[2026-01-26 08:59:21] 2026-01-26 13:58:44,369 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 08:59:21] 2026-01-26 13:58:44,413 | INFO     | [payload] failed_post thread has finished
[2026-01-26 08:59:21] 2026-01-26 13:58:44,777 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 08:59:21] 2026-01-26 13:58:44,778 | INFO     | [data] copytool_in thread has finished
[2026-01-26 08:59:21] 2026-01-26 13:58:44,956 | INFO     | [data] control thread has finished
[2026-01-26 08:59:21] 2026-01-26 13:58:45,063 | INFO     | [payload] validate_post thread has finished
[2026-01-26 08:59:21] 2026-01-26 13:58:45,092 | INFO     | [job] control thread has finished
[2026-01-26 08:59:21] 2026-01-26 13:58:45,182 | INFO     | [data] copytool_out thread has finished
[2026-01-26 08:59:21] 2026-01-26 13:58:45,240 | INFO     | [payload] control thread has finished
[2026-01-26 08:59:21] 2026-01-26 13:58:45,468 | INFO     | [job] validate thread has finished
[2026-01-26 08:59:21] 2026-01-26 13:58:45,598 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 08:59:21] 2026-01-26 13:58:45,598 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 08:59:21] 2026-01-26 13:58:47,178 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 08:59:21] 2026-01-26 13:59:13,923 | INFO     | PID=7713 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-26 08:59:21] 2026-01-26 13:59:13,923 | INFO     | .. there are 3 such processes running
[2026-01-26 08:59:21] 2026-01-26 13:59:13,923 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 08:59:21] 2026-01-26 13:59:13,924 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 08:59:21] 2026-01-26 13:59:13,924 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 08:59:21] 2026-01-26 13:59:16,418 | INFO     | [monitor] cgroup control has ended
[2026-01-26 08:59:21] 2026-01-26 13:59:16,578 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139763939465024)>', '<ExcThread(monitor, started 139763185080064)>']
[2026-01-26 08:59:21] 2026-01-26 13:59:16,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 08:59:21] 2026-01-26 13:59:16,939 | INFO     | [monitor] control thread has ended
[2026-01-26 08:59:21] 2026-01-26 13:59:21,603 | INFO     | all workflow threads have been joined
[2026-01-26 08:59:21] 2026-01-26 13:59:21,603 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 08:59:21] 2026-01-26 13:59:21,603 | INFO     | traces error code: 0
[2026-01-26 08:59:21] 2026-01-26 13:59:21,603 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 08:59:21] 2026-01-26 13:59:21,706 [wrapper] ==== pilot stdout END ====
[2026-01-26 08:59:21] 2026-01-26 13:59:21,709 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 08:59:21] 2026-01-26 13:59:21,715 [wrapper] pilotpid: 7713
[2026-01-26 08:59:21] 2026-01-26 13:59:21,718 [wrapper] Pilot exit status: 0
[2026-01-26 08:59:21] 2026-01-26 13:59:21,727 [wrapper] pandaids: 6983772389
[2026-01-26 08:59:21] 2026-01-26 13:59:21,765 [wrapper] cleanup supervisor_pilot 24146 7714
[2026-01-26 08:59:21] 2026-01-26 13:59:21,768 [wrapper] Test setup, not cleaning
[2026-01-26 08:59:21] 2026-01-26 13:59:21,771 [wrapper] apfmon messages muted
[2026-01-26 08:59:21] 2026-01-26 13:59:21,776 [wrapper] ==== wrapper stdout END ====
[2026-01-26 08:59:21] 2026-01-26 13:59:21,779 [wrapper] ==== wrapper stderr END ====
[2026-01-26 08:59:21]  *** Error codes and diagnostics ***
[2026-01-26 08:59:21]     "exeErrorCode": 0,
[2026-01-26 08:59:21]     "exeErrorDiag": "",
[2026-01-26 08:59:21]     "pilotErrorCode": 0,
[2026-01-26 08:59:21]     "pilotErrorDiag": "",
[2026-01-26 08:59:21]  *** Listing of results directory ***
[2026-01-26 08:59:21] total 667200
[2026-01-26 08:59:21] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 22:16 pilot3.tar.gz
[2026-01-26 08:59:21] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 22:17 queuedata.json
[2026-01-26 08:59:21] -rwx------ 1 boincer umatlas     36322 Jan 25 22:17 runpilot2-wrapper.sh
[2026-01-26 08:59:21] -rw-r--r-- 1 boincer umatlas       100 Jan 26 06:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 08:59:21] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 06:00 run_atlas
[2026-01-26 08:59:21] -rw-r--r-- 1 boincer umatlas       105 Jan 26 06:00 job.xml
[2026-01-26 08:59:21] -rw-r--r-- 2 boincer umatlas 494221727 Jan 26 06:00 EVNT.48317869._000033.pool.root.1
[2026-01-26 08:59:21] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 06:00 start_atlas.sh
[2026-01-26 08:59:21] drwxrwx--x 2 boincer umatlas      4096 Jan 26 06:00 shared
[2026-01-26 08:59:21] -rw-r--r-- 2 boincer umatlas    597750 Jan 26 06:00 input.tar.gz
[2026-01-26 08:59:21] -rw-r--r-- 1 boincer umatlas         0 Jan 26 06:00 boinc_lockfile
[2026-01-26 08:59:21] -rw-r--r-- 1 boincer umatlas      2514 Jan 26 06:00 pandaJob.out
[2026-01-26 08:59:21] -rw------- 1 boincer umatlas        57 Jan 26 06:00 setup.sh.local
[2026-01-26 08:59:21] -rw------- 1 boincer umatlas   1004246 Jan 26 06:00 agis_schedconf.cvmfs.json
[2026-01-26 08:59:21] -rw------- 1 boincer umatlas   1516246 Jan 26 06:00 agis_ddmendpoints.agis.ALL.json
[2026-01-26 08:59:21] -rw------- 1 boincer umatlas       433 Jan 26 06:00 workernode_map.json
[2026-01-26 08:59:21] drwx------ 5 boincer umatlas      4096 Jan 26 06:00 pilot3
[2026-01-26 08:59:21] -rw-r--r-- 1 boincer umatlas      5950 Jan 26 08:56 init_data.xml
[2026-01-26 08:59:21] -rw------- 1 boincer umatlas 181156744 Jan 26 08:58 HITS.48317872._001644.pool.root.1
[2026-01-26 08:59:21] -rw------- 1 boincer umatlas        95 Jan 26 08:58 pilot_heartbeat.json
[2026-01-26 08:59:21] -rw------- 1 boincer umatlas      1056 Jan 26 08:58 memory_monitor_summary.json
[2026-01-26 08:59:21] -rw-r--r-- 1 boincer umatlas       531 Jan 26 08:58 boinc_task_state.xml
[2026-01-26 08:59:21] -rw------- 1 boincer umatlas    437354 Jan 26 08:58 log.48317872._001644.job.log.tgz.1
[2026-01-26 08:59:21] -rw------- 1 boincer umatlas      6408 Jan 26 08:58 heartbeat.json
[2026-01-26 08:59:21] -rw-r--r-- 1 boincer umatlas        28 Jan 26 08:59 wrapper_checkpoint.txt
[2026-01-26 08:59:21] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 08:59 boinc_mmap_file
[2026-01-26 08:59:21] -rw------- 1 boincer umatlas      4816 Jan 26 08:59 pilotlog.txt
[2026-01-26 08:59:21] -rw------- 1 boincer umatlas   1506944 Jan 26 08:59 log.48317872._001644.job.log.1
[2026-01-26 08:59:21] -rw------- 1 boincer umatlas       357 Jan 26 08:59 output.list
[2026-01-26 08:59:21] -rw-r--r-- 1 boincer umatlas       620 Jan 26 08:59 runtime_log
[2026-01-26 08:59:21] -rw------- 1 boincer umatlas   1966080 Jan 26 08:59 result.tar.gz
[2026-01-26 08:59:21] -rw-r--r-- 1 boincer umatlas      9337 Jan 26 08:59 runtime_log.err
[2026-01-26 08:59:21] -rw------- 1 boincer umatlas       660 Jan 26 08:59 OdWKDmmHS48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVs8KDmZ2uCFm.diag
[2026-01-26 08:59:21] -rw-r--r-- 1 boincer umatlas     21420 Jan 26 08:59 stderr.txt
[2026-01-26 08:59:21] HITS file was successfully produced:
[2026-01-26 08:59:21] -rw------- 1 boincer umatlas 181156744 Jan 26 08:58 shared/HITS.pool.root.1
[2026-01-26 08:59:21]  *** Contents of shared directory: ***
[2026-01-26 08:59:21] total 662080
[2026-01-26 08:59:21] -rw-r--r-- 2 boincer umatlas 494221727 Jan 26 06:00 ATLAS.root_0
[2026-01-26 08:59:21] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 06:00 start_atlas.sh
[2026-01-26 08:59:21] -rw-r--r-- 2 boincer umatlas    597750 Jan 26 06:00 input.tar.gz
[2026-01-26 08:59:21] -rw------- 1 boincer umatlas 181156744 Jan 26 08:58 HITS.pool.root.1
[2026-01-26 08:59:21] -rw------- 1 boincer umatlas   1966080 Jan 26 08:59 result.tar.gz
08:59:23 (3711): run_atlas exited; CPU time 80130.496261
08:59:23 (3711): called boinc_finish(0)

</stderr_txt>
]]>

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