Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:27:27 (3144214): wrapper (7.7.26015): starting
19:27:27 (3144214): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 19:27:27] Arguments: --nthreads 4
[2026-01-26 19:27:27] Threads: 4
[2026-01-26 19:27:27] Checking for CVMFS
[2026-01-26 19:27:27] No cvmfs_config command found, will try listing directly
[2026-01-26 19:27:27] CVMFS is ok
[2026-01-26 19:27:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 19:27:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 19:27:27] Further information can be found at the LHC@home message board.
[2026-01-26 19:27:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 19:27:27] Checking for apptainer binary...
[2026-01-26 19:27:27] which: no apptainer in ((null))
[2026-01-26 19:27:27] apptainer is not installed, using version from CVMFS
[2026-01-26 19:27:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 19:27:27] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-01-26 19:27:27] apptainer works
[2026-01-26 19:27:27] Set ATHENA_PROC_NUMBER=4
[2026-01-26 19:27:27] Set ATHENA_CORE_NUMBER=4
[2026-01-26 19:27:27] Starting ATLAS job with PandaID=6983344698
[2026-01-26 19:27:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 00:01:22]  *** The last 200 lines of the pilot log: ***
[2026-01-27 00:01:22] 2026-01-26 22:56:20,060 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 00:01:22] 2026-01-26 22:56:20,195 | INFO     | job 6983344698 has state=finished
[2026-01-27 00:01:22] 2026-01-26 22:56:20,195 | INFO     | preparing for final server update for job 6983344698 in state='finished'
[2026-01-27 00:01:22] 2026-01-26 22:56:20,196 | INFO     | reading metadata from: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6983344698/jobReport.json
[2026-01-27 00:01:22] 2026-01-26 22:56:20,199 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot40/slots/0/workernode_map.json
[2026-01-27 00:01:22] 2026-01-26 22:56:20,199 | INFO     | this job has now completed (state=finished)
[2026-01-27 00:01:22] 2026-01-26 22:56:20,199 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 00:01:22] 2026-01-26 22:56:20,199 | INFO     | log transfer has been attempted: DONE
[2026-01-27 00:01:22] 2026-01-26 22:56:20,200 | INFO     | job 6983344698 has finished - writing final server update
[2026-01-27 00:01:22] 2026-01-26 22:56:20,200 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_689889/.job.ad'
[2026-01-27 00:01:22] 2026-01-26 22:56:20,200 | INFO     | total number of processed events: 400 (read)
[2026-01-27 00:01:22] 2026-01-26 22:56:20,208 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6983344698/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 00:01:22] 2026-01-26 22:56:20,209 | INFO     | extracted standard info from prmon json
[2026-01-27 00:01:22] 2026-01-26 22:56:20,209 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 00:01:22] 2026-01-26 22:56:20,209 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 00:01:22] 2026-01-26 22:56:20,210 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 00:01:22] 2026-01-26 22:56:20,210 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 00:01:22] 2026-01-26 22:56:20,215 | INFO     | fitting pss+swap vs Time
[2026-01-27 00:01:22] 2026-01-26 22:56:20,216 | INFO     | sum of square deviations: 5705372090.0
[2026-01-27 00:01:22] 2026-01-26 22:56:20,218 | INFO     | sum of deviations: -65401401259.000015
[2026-01-27 00:01:22] 2026-01-26 22:56:20,218 | INFO     | mean x: 1769460100.5
[2026-01-27 00:01:22] 2026-01-26 22:56:20,218 | INFO     | mean y: 2399389.1893939395
[2026-01-27 00:01:22] 2026-01-26 22:56:20,218 | INFO     | intersect: 20285944128.966564
[2026-01-27 00:01:22] 2026-01-26 22:56:20,219 | INFO     | chi2: 1.8542652104599955
[2026-01-27 00:01:22] 2026-01-26 22:56:20,219 | INFO     | sum of square deviations: 5387301010.0
[2026-01-27 00:01:22] 2026-01-26 22:56:20,221 | INFO     | sum of deviations: -63904415875.0
[2026-01-27 00:01:22] 2026-01-26 22:56:20,222 | INFO     | mean x: 1769459948.0
[2026-01-27 00:01:22] 2026-01-26 22:56:20,222 | INFO     | mean y: 2400107.0077220076
[2026-01-27 00:01:22] 2026-01-26 22:56:20,222 | INFO     | intersect: 20991816547.866272
[2026-01-27 00:01:22] 2026-01-26 22:56:20,222 | INFO     | chi2: 1.8489283479369547
[2026-01-27 00:01:22] 2026-01-26 22:56:20,223 | INFO     | current chi2=1.8489283479369547 (change=0.2878154911678916 %)
[2026-01-27 00:01:22] 2026-01-26 22:56:20,223 | INFO     | right removable region: 258
[2026-01-27 00:01:22] 2026-01-26 22:56:20,223 | INFO     | sum of square deviations: 5387301010.0
[2026-01-27 00:01:22] 2026-01-26 22:56:20,225 | INFO     | sum of deviations: -96227123630.00002
[2026-01-27 00:01:22] 2026-01-26 22:56:20,226 | INFO     | mean x: 1769460253.0
[2026-01-27 00:01:22] 2026-01-26 22:56:20,226 | INFO     | mean y: 2413993.6563706566
[2026-01-27 00:01:22] 2026-01-26 22:56:20,226 | INFO     | intersect: 31608234831.909866
[2026-01-27 00:01:22] 2026-01-26 22:56:20,226 | INFO     | chi2: 0.5268720802370598
[2026-01-27 00:01:22] 2026-01-26 22:56:20,227 | INFO     | current chi2=0.5268720802370598 (change=71.58593726156593 %)
[2026-01-27 00:01:22] 2026-01-26 22:56:20,227 | INFO     | sum of square deviations: 5081276667.5
[2026-01-27 00:01:22] 2026-01-26 22:56:20,229 | INFO     | sum of deviations: -85148212007.99998
[2026-01-27 00:01:22] 2026-01-26 22:56:20,229 | INFO     | mean x: 1769460405.5
[2026-01-27 00:01:22] 2026-01-26 22:56:20,229 | INFO     | mean y: 2408462.1653543306
[2026-01-27 00:01:22] 2026-01-26 22:56:20,230 | INFO     | intersect: 29653694862.479362
[2026-01-27 00:01:22] 2026-01-26 22:56:20,230 | INFO     | chi2: 0.5086233557479327
[2026-01-27 00:01:22] 2026-01-26 22:56:20,230 | INFO     | current chi2=0.5086233557479327 (change=3.463596795813563 %)
[2026-01-27 00:01:22] 2026-01-26 22:56:20,230 | INFO     | left removable region: 20
[2026-01-27 00:01:22] 2026-01-26 22:56:20,231 | INFO     | sum of square deviations: 4180243959.5
[2026-01-27 00:01:22] 2026-01-26 22:56:20,233 | INFO     | sum of deviations: -57186217139.5
[2026-01-27 00:01:22] 2026-01-26 22:56:20,233 | INFO     | mean x: 1769460527.5
[2026-01-27 00:01:22] 2026-01-26 22:56:20,234 | INFO     | mean y: 2395237.256302521
[2026-01-27 00:01:22] 2026-01-26 22:56:20,234 | INFO     | intersect: 24208818337.37901
[2026-01-27 00:01:22] 2026-01-26 22:56:20,234 | INFO     | chi2: 0.42154481078227624
[2026-01-27 00:01:22] 2026-01-26 22:56:20,234 | INFO     | current memory leak: -13.68 B/s (using 238 data points, chi2=0.42)
[2026-01-27 00:01:22] 2026-01-26 22:56:20,235 | INFO     | could have reported an average CPU frequency of 2294 MHz (12 samples)
[2026-01-27 00:01:22] 2026-01-26 22:56:20,235 | INFO     | ..............................
[2026-01-27 00:01:22] 2026-01-26 22:56:20,235 | INFO     | . Timing measurements:
[2026-01-27 00:01:22] 2026-01-26 22:56:20,236 | INFO     | . get job = 0 s
[2026-01-27 00:01:22] 2026-01-26 22:56:20,236 | INFO     | . initial setup = 6 s
[2026-01-27 00:01:22] 2026-01-26 22:56:20,236 | INFO     | . payload setup = 6 s
[2026-01-27 00:01:22] 2026-01-26 22:56:20,236 | INFO     | . stage-in = 0 s
[2026-01-27 00:01:22] 2026-01-26 22:56:20,236 | INFO     | . payload execution = 16097 s
[2026-01-27 00:01:22] 2026-01-26 22:56:20,236 | INFO     | . stage-out = 1 s
[2026-01-27 00:01:22] 2026-01-26 22:56:20,236 | INFO     | . log creation = 0 s
[2026-01-27 00:01:22] 2026-01-26 22:56:20,237 | INFO     | ..............................
[2026-01-27 00:01:22] 2026-01-26 22:56:20,354 | INFO     | 
[2026-01-27 00:01:22] 2026-01-26 22:56:20,354 | INFO     | job summary report
[2026-01-27 00:01:22] 2026-01-26 22:56:20,355 | INFO     | --------------------------------------------------
[2026-01-27 00:01:22] 2026-01-26 22:56:20,355 | INFO     | PanDA job id: 6983344698
[2026-01-27 00:01:22] 2026-01-26 22:56:20,355 | INFO     | task id: 48317872
[2026-01-27 00:01:22] 2026-01-26 22:56:20,355 | INFO     | errors: (none)
[2026-01-27 00:01:22] 2026-01-26 22:56:20,355 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 00:01:22] 2026-01-26 22:56:20,355 | INFO     | pilot state: finished 
[2026-01-27 00:01:22] 2026-01-26 22:56:20,355 | INFO     | transexitcode: 0
[2026-01-27 00:01:22] 2026-01-26 22:56:20,356 | INFO     | exeerrorcode: 0
[2026-01-27 00:01:22] 2026-01-26 22:56:20,356 | INFO     | exeerrordiag: 
[2026-01-27 00:01:22] 2026-01-26 22:56:20,356 | INFO     | exitcode: 0
[2026-01-27 00:01:22] 2026-01-26 22:56:20,356 | INFO     | exitmsg: OK
[2026-01-27 00:01:22] 2026-01-26 22:56:20,356 | INFO     | cpuconsumptiontime: 61930 s
[2026-01-27 00:01:22] 2026-01-26 22:56:20,356 | INFO     | nevents: 400
[2026-01-27 00:01:22] 2026-01-26 22:56:20,356 | INFO     | neventsw: 0
[2026-01-27 00:01:22] 2026-01-26 22:56:20,356 | INFO     | pid: 3152938
[2026-01-27 00:01:22] 2026-01-26 22:56:20,357 | INFO     | pgrp: 3152938
[2026-01-27 00:01:22] 2026-01-26 22:56:20,357 | INFO     | corecount: 4
[2026-01-27 00:01:22] 2026-01-26 22:56:20,357 | INFO     | event service: False
[2026-01-27 00:01:22] 2026-01-26 22:56:20,357 | INFO     | sizes: {0: 2284033, 1: 2284267, 16107: 2315482, 16108: 2315481, 16109: 2324557, 16112: 2324935}
[2026-01-27 00:01:22] 2026-01-26 22:56:20,357 | INFO     | --------------------------------------------------
[2026-01-27 00:01:22] 2026-01-26 22:56:20,357 | INFO     | 
[2026-01-27 00:01:22] 2026-01-26 22:56:20,357 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2026-01-27 00:01:22] 2026-01-26 22:56:20,377 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 00:01:22] 2026-01-26 22:56:20,377 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 00:01:22] 2026-01-26 22:56:20,378 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 00:01:22] 2026-01-26 22:56:20,378 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 00:01:22] 2026-01-26 22:56:20,378 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 00:01:22] 2026-01-26 22:56:20,378 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 00:01:22] 2026-01-26 22:56:20,378 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 00:01:22] 2026-01-26 22:56:20,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 00:01:22] 2026-01-26 22:56:20,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 00:01:22] 2026-01-26 22:56:20,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 00:01:22] 2026-01-26 22:56:20,379 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 00:01:22] 2026-01-26 22:56:20,379 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 00:01:22] 2026-01-26 22:56:20,379 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 00:01:22] 2026-01-26 22:56:20,379 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 00:01:22] 2026-01-26 22:56:20,379 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 00:01:22] 2026-01-26 22:56:20,379 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 00:01:22] 2026-01-26 22:56:20,379 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 00:01:22] 2026-01-26 22:56:20,380 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 00:01:22] 2026-01-26 22:56:20,380 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 00:01:22] 2026-01-26 22:56:20,380 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 00:01:22] 2026-01-26 22:56:20,380 | INFO     | job 6983344698 has completed (purged errors)
[2026-01-27 00:01:22] 2026-01-26 22:56:20,380 | INFO     | overall cleanup function is called
[2026-01-27 00:01:22] 2026-01-26 22:56:21,389 | INFO     | --- collectZombieJob: --- 10, [3152938]
[2026-01-27 00:01:22] 2026-01-26 22:56:21,390 | INFO     | zombie collector waiting for pid 3152938
[2026-01-27 00:01:22] 2026-01-26 22:56:21,390 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 00:01:22] 2026-01-26 22:56:21,390 | INFO     | collected zombie processes
[2026-01-27 00:01:22] 2026-01-26 22:56:21,390 | INFO     | will attempt to kill all subprocesses of pid=3152938
[2026-01-27 00:01:22] 2026-01-26 22:56:21,754 | INFO     | process IDs to be killed: [3152938] (in reverse order)
[2026-01-27 00:01:22] 2026-01-26 22:56:21,845 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 00:01:22] 2026-01-26 22:56:21,846 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 00:01:22] 2026-01-26 22:56:21,856 | INFO     | did not find any defunct processes belonging to 3152938
[2026-01-27 00:01:22] 2026-01-26 22:56:21,865 | INFO     | did not find any defunct processes belonging to 3152938
[2026-01-27 00:01:22] 2026-01-26 22:56:21,866 | INFO     | ready for new job
[2026-01-27 00:01:22] 2026-01-26 22:56:21,866 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 00:01:22] 2026-01-26 22:56:21,868 | INFO     | **************************************
[2026-01-27 00:01:22] 2026-01-26 22:56:21,868 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 00:01:22] 2026-01-26 22:56:21,869 | INFO     | **************************************
[2026-01-27 00:01:22] 2026-01-26 22:56:21,869 | INFO     | 
[2026-01-27 00:01:22] 2026-01-26 22:56:21,872 | INFO     | architecture information:
[2026-01-27 00:01:22] 2026-01-26 22:56:21,872 | INFO     | executing command: cat /etc/os-release
[2026-01-27 00:01:22] 2026-01-26 22:56:21,887 | INFO     | cat /etc/os-release:
[2026-01-27 00:01:22] NAME="CentOS Linux"
[2026-01-27 00:01:22] VERSION="7 (Core)"
[2026-01-27 00:01:22] ID="centos"
[2026-01-27 00:01:22] ID_LIKE="rhel fedora"
[2026-01-27 00:01:22] VERSION_ID="7"
[2026-01-27 00:01:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 00:01:22] ANSI_COLOR="0;31"
[2026-01-27 00:01:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 00:01:22] HOME_URL="https://www.centos.org/"
[2026-01-27 00:01:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 00:01:22] 
[2026-01-27 00:01:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 00:01:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 00:01:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 00:01:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 00:01:22] 
[2026-01-27 00:01:22] 2026-01-26 22:56:21,887 | INFO     | **************************************
[2026-01-27 00:01:22] 2026-01-26 22:56:22,390 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2026-01-27 00:01:22] 2026-01-26 22:56:22,408 | INFO     | sufficient remaining disk space (1672784904192 B)
[2026-01-27 00:01:22] 2026-01-26 22:56:22,408 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 00:01:22] 2026-01-26 22:56:22,409 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 00:01:22] 2026-01-26 22:56:22,409 | INFO     | update_server=False
[2026-01-27 00:01:22] 2026-01-26 22:56:22,409 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 00:01:22] 2026-01-26 22:56:22,409 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 00:01:22] 2026-01-26 22:56:22,595 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 00:01:22] 2026-01-26 22:56:23,003 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 00:01:22] 2026-01-26 22:56:23,004 | INFO     | aborting loop
[2026-01-27 00:01:22] 2026-01-26 22:56:23,137 | INFO     | all data control threads have been joined
[2026-01-27 00:01:22] 2026-01-26 22:56:23,406 | INFO     | all payload control threads have been joined
[2026-01-27 00:01:22] 2026-01-26 22:56:23,414 | INFO     | [job] retrieve thread has finished
[2026-01-27 00:01:22] 2026-01-26 22:56:23,745 | INFO     | [payload] failed_post thread has finished
[2026-01-27 00:01:22] 2026-01-26 22:56:23,767 | INFO     | all job control threads have been joined
[2026-01-27 00:01:22] 2026-01-26 22:56:23,922 | INFO     | [job] validate thread has finished
[2026-01-27 00:01:22] 2026-01-26 22:56:24,009 | INFO     | [job] job monitor thread has finished
[2026-01-27 00:01:22] 2026-01-26 22:56:24,039 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 00:01:22] 2026-01-26 22:56:24,079 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 00:01:22] 2026-01-26 22:56:24,143 | INFO     | [data] control thread has finished
[2026-01-27 00:01:22] 2026-01-26 22:56:24,411 | INFO     | [payload] control thread has finished
[2026-01-27 00:01:22] 2026-01-26 22:56:24,493 | INFO     | [data] copytool_in thread has finished
[2026-01-27 00:01:22] 2026-01-26 22:56:24,600 | INFO     | [data] copytool_out thread has finished
[2026-01-27 00:01:22] 2026-01-26 22:56:24,639 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 00:01:22] 2026-01-26 22:56:24,703 | INFO     | [payload] validate_post thread has finished
[2026-01-27 00:01:22] 2026-01-26 22:56:24,772 | INFO     | [job] control thread has finished
[2026-01-27 00:01:22] 2026-01-26 22:56:24,778 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 00:01:22] 2026-01-26 22:56:25,363 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 00:01:22] 2026-01-26 22:56:26,368 | INFO     | [job] queue monitor thread has finished
[2026-01-27 00:01:22] 2026-01-26 22:56:26,414 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 00:01:22] 2026-01-26 22:56:53,119 | INFO     | PID=3148258 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 00:01:22] 2026-01-26 22:56:53,119 | INFO     | .. there are 3 such processes running
[2026-01-27 00:01:22] 2026-01-26 22:56:53,119 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 00:01:22] 2026-01-26 22:56:53,120 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 00:01:22] 2026-01-26 22:56:53,120 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 00:01:22] 2026-01-26 22:57:12,958 | INFO     | [monitor] cgroup control has ended
[2026-01-27 00:01:22] 2026-01-26 22:57:14,071 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22854542882624)>', '<ExcThread(monitor, started 22854304544512)>']
[2026-01-27 00:01:22] 2026-01-26 22:57:14,222 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 00:01:22] 2026-01-26 22:57:14,223 | INFO     | [monitor] control thread has ended
[2026-01-27 00:01:22] 2026-01-26 22:57:19,096 | INFO     | all workflow threads have been joined
[2026-01-27 00:01:22] 2026-01-26 22:57:19,097 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 00:01:22] 2026-01-26 22:57:19,097 | INFO     | traces error code: 0
[2026-01-27 00:01:22] 2026-01-26 22:57:19,097 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 00:01:22] 2026-01-26 22:57:19,225 [wrapper] ==== pilot stdout END ====
[2026-01-27 00:01:22] 2026-01-26 22:57:19,227 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 00:01:22] 2026-01-26 22:57:19,229 [wrapper] pilotpid: 3148258
[2026-01-27 00:01:22] 2026-01-26 22:57:19,231 [wrapper] Pilot exit status: 0
[2026-01-27 00:01:22] 2026-01-26 22:57:19,240 [wrapper] pandaids: 6983344698
[2026-01-27 00:01:22] 2026-01-26 22:57:19,295 [wrapper] cleanup supervisor_pilot 3278405 3148259
[2026-01-27 00:01:22] 2026-01-26 22:57:19,297 [wrapper] Test setup, not cleaning
[2026-01-27 00:01:22] 2026-01-26 22:57:19,300 [wrapper] apfmon messages muted
[2026-01-27 00:01:22] 2026-01-26 22:57:19,302 [wrapper] ==== wrapper stdout END ====
[2026-01-27 00:01:22] 2026-01-26 22:57:19,305 [wrapper] ==== wrapper stderr END ====
[2026-01-27 00:01:22]  *** Error codes and diagnostics ***
[2026-01-27 00:01:22]     "exeErrorCode": 0,
[2026-01-27 00:01:22]     "exeErrorDiag": "",
[2026-01-27 00:01:22]     "pilotErrorCode": 0,
[2026-01-27 00:01:22]     "pilotErrorDiag": "",
[2026-01-27 00:01:22]  *** Listing of results directory ***
[2026-01-27 00:01:22] total 684500
[2026-01-27 00:01:22] -rw-r--r-- 1 boinc boinc    584422 Jan 25 21:48 pilot3.tar.gz
[2026-01-27 00:01:22] -rwx------ 1 boinc boinc     36322 Jan 25 21:51 runpilot2-wrapper.sh
[2026-01-27 00:01:22] -rw-r--r-- 1 boinc boinc      5111 Jan 25 21:54 queuedata.json
[2026-01-27 00:01:22] -rw-r--r-- 1 boinc boinc       100 Jan 26 19:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 00:01:22] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 19:27 run_atlas
[2026-01-27 00:01:22] -rw-r--r-- 1 boinc boinc       105 Jan 26 19:27 job.xml
[2026-01-27 00:01:22] -rw-r--r-- 1 boinc boinc      6424 Jan 26 19:27 init_data.xml
[2026-01-27 00:01:22] -rw-r--r-- 2 boinc boinc 499625733 Jan 26 19:27 EVNT.48317869._000019.pool.root.1
[2026-01-27 00:01:22] -rw-r--r-- 2 boinc boinc     15845 Jan 26 19:27 start_atlas.sh
[2026-01-27 00:01:22] drwxrwx--x 2 boinc boinc      4096 Jan 26 19:27 shared
[2026-01-27 00:01:22] -rw-r--r-- 2 boinc boinc    597748 Jan 26 19:27 input.tar.gz
[2026-01-27 00:01:22] -rw-r--r-- 1 boinc boinc         0 Jan 26 19:27 boinc_lockfile
[2026-01-27 00:01:22] -rw-r--r-- 1 boinc boinc      2512 Jan 26 19:27 pandaJob.out
[2026-01-27 00:01:22] -rw------- 1 boinc boinc   1006384 Jan 26 19:27 agis_schedconf.cvmfs.json
[2026-01-27 00:01:22] -rw------- 1 boinc boinc       454 Jan 26 19:27 workernode_map.json
[2026-01-27 00:01:22] drwx------ 5 boinc boinc      4096 Jan 26 19:27 pilot3
[2026-01-27 00:01:22] -rw------- 1 boinc boinc 191910392 Jan 26 23:55 HITS.48317872._000946.pool.root.1
[2026-01-27 00:01:22] -rw-r--r-- 1 boinc boinc       529 Jan 26 23:55 boinc_task_state.xml
[2026-01-27 00:01:22] -rw------- 1 boinc boinc        95 Jan 26 23:56 pilot_heartbeat.json
[2026-01-27 00:01:22] -rw------- 1 boinc boinc      1034 Jan 26 23:56 memory_monitor_summary.json
[2026-01-27 00:01:22] -rw------- 1 boinc boinc   1516246 Jan 26 23:56 agis_ddmendpoints.agis.ALL.json
[2026-01-27 00:01:22] -rw------- 1 boinc boinc    458946 Jan 26 23:56 log.48317872._000946.job.log.tgz.1
[2026-01-27 00:01:22] -rw------- 1 boinc boinc      6407 Jan 26 23:56 heartbeat.json
[2026-01-27 00:01:22] -rw------- 1 boinc boinc      4830 Jan 26 23:57 pilotlog.txt
[2026-01-27 00:01:22] -rw------- 1 boinc boinc   2264013 Jan 26 23:57 log.48317872._000946.job.log.1
[2026-01-27 00:01:22] -rw------- 1 boinc boinc       357 Jan 26 23:57 output.list
[2026-01-27 00:01:22] -rw-r--r-- 1 boinc boinc       620 Jan 26 23:57 runtime_log
[2026-01-27 00:01:22] -rw------- 1 boinc boinc   2744320 Jan 26 23:57 result.tar.gz
[2026-01-27 00:01:22] -rw------- 1 boinc boinc       666 Jan 26 23:57 w5sKDmTGM48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbQ8KDm0aIPvm.diag
[2026-01-27 00:01:22] -rw-r--r-- 1 boinc boinc      9205 Jan 26 23:57 runtime_log.err
[2026-01-27 00:01:22] -rw-r--r-- 1 boinc boinc        26 Jan 27 00:01 wrapper_checkpoint.txt
[2026-01-27 00:01:22] -rw-r--r-- 1 boinc boinc      8192 Jan 27 00:01 boinc_mmap_file
[2026-01-27 00:01:22] -rw-r--r-- 1 boinc boinc     21136 Jan 27 00:01 stderr.txt
[2026-01-27 00:01:22] HITS file was successfully produced:
[2026-01-27 00:01:22] -rw------- 1 boinc boinc 191910392 Jan 26 23:55 shared/HITS.pool.root.1
[2026-01-27 00:01:22]  *** Contents of shared directory: ***
[2026-01-27 00:01:22] total 678620
[2026-01-27 00:01:22] -rw-r--r-- 2 boinc boinc 499625733 Jan 26 19:27 ATLAS.root_0
[2026-01-27 00:01:22] -rw-r--r-- 2 boinc boinc     15845 Jan 26 19:27 start_atlas.sh
[2026-01-27 00:01:22] -rw-r--r-- 2 boinc boinc    597748 Jan 26 19:27 input.tar.gz
[2026-01-27 00:01:22] -rw------- 1 boinc boinc 191910392 Jan 26 23:55 HITS.pool.root.1
[2026-01-27 00:01:22] -rw------- 1 boinc boinc   2744320 Jan 26 23:57 result.tar.gz
00:01:24 (3144214): run_atlas exited; CPU time 62615.074043
00:01:24 (3144214): called boinc_finish(0)

</stderr_txt>
]]>

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