Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
03:32:42 (2121467): wrapper (7.7.26015): starting
03:32:42 (2121467): wrapper: running run_atlas (--nthreads 12)
[2026-01-27 03:32:42] Arguments: --nthreads 12
[2026-01-27 03:32:42] Threads: 12
[2026-01-27 03:32:42] Checking for CVMFS
[2026-01-27 03:32:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 03:32:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 03:32:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 03:32:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 03:32:43] 2.12.7.0 2755337 5184 77192 155578 2 50 2159422 4194305 917 130560 0 7124453 99.994 180292 529 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-01-27 03:32:43] CVMFS is ok
[2026-01-27 03:32:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 03:32:43] Checking for apptainer binary...
[2026-01-27 03:32:43] apptainer is not installed, using version from CVMFS
[2026-01-27 03:32:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 03:32:43] Trebeth
[2026-01-27 03:32:43] apptainer works
[2026-01-27 03:32:43] Set ATHENA_PROC_NUMBER=12
[2026-01-27 03:32:43] Set ATHENA_CORE_NUMBER=12
[2026-01-27 03:32:43] Starting ATLAS job with PandaID=6983305105
[2026-01-27 03:32:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 04:46:16]  *** The last 200 lines of the pilot log: ***
[2026-01-27 04:46:16]  is_altstaged=None
[2026-01-27 04:46:16]  is_tar=False
[2026-01-27 04:46:16]  lfn=log.48318042._001063.job.log.tgz.1
[2026-01-27 04:46:16]  mtime=0
[2026-01-27 04:46:16]  protocol_id=None
[2026-01-27 04:46:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-27 04:46:16]  replicas=None
[2026-01-27 04:46:16]  scope=mc23_13p6TeV
[2026-01-27 04:46:16]  status=None
[2026-01-27 04:46:16]  status_code=0
[2026-01-27 04:46:16]  storage_token=
[2026-01-27 04:46:16]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6983305105/log.48318042._001063.job.log.tgz.1
[2026-01-27 04:46:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/bc/log.48318042._001063.job.log.tgz.1
[2026-01-27 04:46:16]  workdir=None
[2026-01-27 04:46:16] ]
[2026-01-27 04:46:16] 2026-01-27 09:45:52,775 | INFO     | transferring file log.48318042._001063.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6983305105/log.48318042._001063.job.log.tgz.1 to /var/lib/boinc
[2026-01-27 04:46:16] 2026-01-27 09:45:52,775 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6983305105/log.48318042._001063.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.483180
[2026-01-27 04:46:16] 2026-01-27 09:45:52,790 | INFO     | adding to output.list: log.48318042._001063.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/bc/log.48318042._001063.job.log.tg
[2026-01-27 04:46:16] 2026-01-27 09:45:52,790 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 04:46:16] 2026-01-27 09:45:52,790 | INFO     | summary of transferred files:
[2026-01-27 04:46:16] 2026-01-27 09:45:52,790 | INFO     |  -- lfn=log.48318042._001063.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 04:46:16] 2026-01-27 09:45:52,790 | INFO     | stage-out finished correctly
[2026-01-27 04:46:16] 2026-01-27 09:45:53,608 | INFO     | PID=2125923 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 04:46:16] 2026-01-27 09:45:53,609 | INFO     | .. there are 2 such processes running
[2026-01-27 04:46:16] 2026-01-27 09:45:54,110 | INFO     | monitor loop #330: job 0:6983305105 is in state 'finished'
[2026-01-27 04:46:16] 2026-01-27 09:45:54,110 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 04:46:16] 2026-01-27 09:45:54,609 | INFO     | time since job start (4377s) is within the limit (349056.0s)
[2026-01-27 04:46:16] 2026-01-27 09:45:55,688 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 04:46:16] 2026-01-27 09:45:56,571 | INFO     | job 6983305105 has state=finished
[2026-01-27 04:46:16] 2026-01-27 09:45:56,572 | INFO     | preparing for final server update for job 6983305105 in state='finished'
[2026-01-27 04:46:16] 2026-01-27 09:45:56,572 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-6983305105/jobReport.json
[2026-01-27 04:46:16] 2026-01-27 09:45:56,574 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-01-27 04:46:16] 2026-01-27 09:45:56,574 | INFO     | this job has now completed (state=finished)
[2026-01-27 04:46:16] 2026-01-27 09:45:56,575 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 04:46:16] 2026-01-27 09:45:56,575 | INFO     | log transfer has been attempted: DONE
[2026-01-27 04:46:16] 2026-01-27 09:45:56,575 | INFO     | job 6983305105 has finished - writing final server update
[2026-01-27 04:46:16] 2026-01-27 09:45:56,575 | INFO     | total number of processed events: 400 (read)
[2026-01-27 04:46:16] 2026-01-27 09:45:56,608 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6983305105/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 04:46:16] 2026-01-27 09:45:56,609 | INFO     | extracted standard info from prmon json
[2026-01-27 04:46:16] 2026-01-27 09:45:56,609 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 04:46:16] 2026-01-27 09:45:56,609 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 04:46:16] 2026-01-27 09:45:56,610 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 04:46:16] 2026-01-27 09:45:56,610 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 04:46:16] 2026-01-27 09:45:56,611 | INFO     | fitting pss+swap vs Time
[2026-01-27 04:46:16] 2026-01-27 09:45:56,611 | INFO     | monitor loop #331: job 0:6983305105 is in state 'finished'
[2026-01-27 04:46:16] 2026-01-27 09:45:56,612 | INFO     | sum of square deviations: 85136480.0
[2026-01-27 04:46:16] 2026-01-27 09:45:56,612 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 04:46:16] 2026-01-27 09:45:56,612 | INFO     | sum of deviations: -8758331687.999998
[2026-01-27 04:46:16] 2026-01-27 09:45:56,612 | INFO     | mean x: 1769505053.0
[2026-01-27 04:46:16] 2026-01-27 09:45:56,612 | INFO     | mean y: 2873075.846153846
[2026-01-27 04:46:16] 2026-01-27 09:45:56,613 | INFO     | intersect: 182038965920.7232
[2026-01-27 04:46:16] 2026-01-27 09:45:56,613 | INFO     | chi2: 0.11427086220691934
[2026-01-27 04:46:16] 2026-01-27 09:45:56,613 | INFO     | current memory leak: -102.87 B/s (using 65 data points, chi2=0.11)
[2026-01-27 04:46:16] 2026-01-27 09:45:56,613 | INFO     | time since job start (4379s) is within the limit (349056.0s)
[2026-01-27 04:46:16] 2026-01-27 09:45:56,614 | INFO     | could have reported an average CPU frequency of 3121 MHz (6 samples)
[2026-01-27 04:46:16] 2026-01-27 09:45:56,614 | INFO     | ..............................
[2026-01-27 04:46:16] 2026-01-27 09:45:56,614 | INFO     | . Timing measurements:
[2026-01-27 04:46:16] 2026-01-27 09:45:56,614 | INFO     | . get job = 0 s
[2026-01-27 04:46:16] 2026-01-27 09:45:56,614 | INFO     | . initial setup = 5 s
[2026-01-27 04:46:16] 2026-01-27 09:45:56,614 | INFO     | . payload setup = 4 s
[2026-01-27 04:46:16] 2026-01-27 09:45:56,614 | INFO     | . stage-in = 0 s
[2026-01-27 04:46:16] 2026-01-27 09:45:56,614 | INFO     | . payload execution = 4355 s
[2026-01-27 04:46:16] 2026-01-27 09:45:56,615 | INFO     | . stage-out = 0 s
[2026-01-27 04:46:16] 2026-01-27 09:45:56,615 | INFO     | . log creation = 0 s
[2026-01-27 04:46:16] 2026-01-27 09:45:56,615 | INFO     | ..............................
[2026-01-27 04:46:16] 2026-01-27 09:45:56,693 | INFO     | 
[2026-01-27 04:46:16] 2026-01-27 09:45:56,693 | INFO     | job summary report
[2026-01-27 04:46:16] 2026-01-27 09:45:56,693 | INFO     | --------------------------------------------------
[2026-01-27 04:46:16] 2026-01-27 09:45:56,693 | INFO     | PanDA job id: 6983305105
[2026-01-27 04:46:16] 2026-01-27 09:45:56,693 | INFO     | task id: 48318042
[2026-01-27 04:46:16] 2026-01-27 09:45:56,694 | INFO     | errors: (none)
[2026-01-27 04:46:16] 2026-01-27 09:45:56,694 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 04:46:16] 2026-01-27 09:45:56,694 | INFO     | pilot state: finished 
[2026-01-27 04:46:16] 2026-01-27 09:45:56,694 | INFO     | transexitcode: 0
[2026-01-27 04:46:16] 2026-01-27 09:45:56,694 | INFO     | exeerrorcode: 0
[2026-01-27 04:46:16] 2026-01-27 09:45:56,694 | INFO     | exeerrordiag: 
[2026-01-27 04:46:16] 2026-01-27 09:45:56,694 | INFO     | exitcode: 0
[2026-01-27 04:46:16] 2026-01-27 09:45:56,694 | INFO     | exitmsg: OK
[2026-01-27 04:46:16] 2026-01-27 09:45:56,694 | INFO     | cpuconsumptiontime: 46456 s
[2026-01-27 04:46:16] 2026-01-27 09:45:56,694 | INFO     | nevents: 400
[2026-01-27 04:46:16] 2026-01-27 09:45:56,694 | INFO     | neventsw: 0
[2026-01-27 04:46:16] 2026-01-27 09:45:56,695 | INFO     | pid: 2130731
[2026-01-27 04:46:16] 2026-01-27 09:45:56,695 | INFO     | pgrp: 2130731
[2026-01-27 04:46:16] 2026-01-27 09:45:56,695 | INFO     | corecount: 12
[2026-01-27 04:46:16] 2026-01-27 09:45:56,695 | INFO     | event service: False
[2026-01-27 04:46:16] 2026-01-27 09:45:56,695 | INFO     | sizes: {0: 2284256, 11: 2284256, 4363: 2310374, 4364: 2319386, 4367: 2319442, 4368: 2319636}
[2026-01-27 04:46:16] 2026-01-27 09:45:56,695 | INFO     | --------------------------------------------------
[2026-01-27 04:46:16] 2026-01-27 09:45:56,695 | INFO     | 
[2026-01-27 04:46:16] 2026-01-27 09:45:56,695 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-01-27 04:46:16] 2026-01-27 09:45:56,711 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 04:46:16] 2026-01-27 09:45:56,711 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 04:46:16] 2026-01-27 09:45:56,711 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 04:46:16] 2026-01-27 09:45:56,711 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 04:46:16] 2026-01-27 09:45:56,711 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 04:46:16] 2026-01-27 09:45:56,712 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 04:46:16] 2026-01-27 09:45:56,712 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 04:46:16] 2026-01-27 09:45:56,712 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 04:46:16] 2026-01-27 09:45:56,712 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 04:46:16] 2026-01-27 09:45:56,712 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 04:46:16] 2026-01-27 09:45:56,712 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 04:46:16] 2026-01-27 09:45:56,712 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 04:46:16] 2026-01-27 09:45:56,712 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 04:46:16] 2026-01-27 09:45:56,713 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 04:46:16] 2026-01-27 09:45:56,713 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 04:46:16] 2026-01-27 09:45:56,713 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 04:46:16] 2026-01-27 09:45:56,713 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 04:46:16] 2026-01-27 09:45:56,713 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 04:46:16] 2026-01-27 09:45:56,713 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 04:46:16] 2026-01-27 09:45:56,713 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 04:46:16] 2026-01-27 09:45:56,713 | INFO     | job 6983305105 has completed (purged errors)
[2026-01-27 04:46:16] 2026-01-27 09:45:56,714 | INFO     | overall cleanup function is called
[2026-01-27 04:46:16] 2026-01-27 09:45:57,722 | INFO     | --- collectZombieJob: --- 10, [2130731]
[2026-01-27 04:46:16] 2026-01-27 09:45:57,722 | INFO     | zombie collector waiting for pid 2130731
[2026-01-27 04:46:16] 2026-01-27 09:45:57,722 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 04:46:16] 2026-01-27 09:45:57,722 | INFO     | collected zombie processes
[2026-01-27 04:46:16] 2026-01-27 09:45:57,722 | INFO     | will attempt to kill all subprocesses of pid=2130731
[2026-01-27 04:46:16] 2026-01-27 09:45:57,909 | INFO     | process IDs to be killed: [2130731] (in reverse order)
[2026-01-27 04:46:16] 2026-01-27 09:45:57,959 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 04:46:16] 2026-01-27 09:45:57,959 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 04:46:16] 2026-01-27 09:45:57,965 | INFO     | did not find any defunct processes belonging to 2130731
[2026-01-27 04:46:16] 2026-01-27 09:45:57,969 | INFO     | did not find any defunct processes belonging to 2130731
[2026-01-27 04:46:16] 2026-01-27 09:45:57,970 | INFO     | ready for new job
[2026-01-27 04:46:16] 2026-01-27 09:45:57,970 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 04:46:16] 2026-01-27 09:45:57,971 | INFO     | **************************************
[2026-01-27 04:46:16] 2026-01-27 09:45:57,971 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 04:46:16] 2026-01-27 09:45:57,971 | INFO     | **************************************
[2026-01-27 04:46:16] 2026-01-27 09:45:57,972 | INFO     | 
[2026-01-27 04:46:16] 2026-01-27 09:45:57,993 | INFO     | architecture information:
[2026-01-27 04:46:16] 2026-01-27 09:45:57,993 | INFO     | executing command: cat /etc/os-release
[2026-01-27 04:46:16] 2026-01-27 09:45:58,003 | INFO     | cat /etc/os-release:
[2026-01-27 04:46:16] NAME="CentOS Linux"
[2026-01-27 04:46:16] VERSION="7 (Core)"
[2026-01-27 04:46:16] ID="centos"
[2026-01-27 04:46:16] ID_LIKE="rhel fedora"
[2026-01-27 04:46:16] VERSION_ID="7"
[2026-01-27 04:46:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 04:46:16] ANSI_COLOR="0;31"
[2026-01-27 04:46:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 04:46:16] HOME_URL="https://www.centos.org/"
[2026-01-27 04:46:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 04:46:16] 
[2026-01-27 04:46:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 04:46:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 04:46:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 04:46:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 04:46:16] 
[2026-01-27 04:46:16] 2026-01-27 09:45:58,003 | INFO     | **************************************
[2026-01-27 04:46:16] 2026-01-27 09:45:58,506 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-01-27 04:46:16] 2026-01-27 09:45:58,519 | INFO     | sufficient remaining disk space (377862750208 B)
[2026-01-27 04:46:16] 2026-01-27 09:45:58,519 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 04:46:16] 2026-01-27 09:45:58,519 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 04:46:16] 2026-01-27 09:45:58,519 | INFO     | update_server=False
[2026-01-27 04:46:16] 2026-01-27 09:45:58,519 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 04:46:16] 2026-01-27 09:45:58,520 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 04:46:16] 2026-01-27 09:45:58,520 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 04:46:16] 2026-01-27 09:45:58,520 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 04:46:16] 2026-01-27 09:45:58,520 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-27 04:46:16] 2026-01-27 09:45:58,521 | INFO     | aborting loop
[2026-01-27 04:46:16] 2026-01-27 09:45:58,521 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 04:46:16] 2026-01-27 09:45:58,522 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 04:46:16] 2026-01-27 09:45:58,522 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 04:46:16] 2026-01-27 09:45:59,159 | INFO     | all data control threads have been joined
[2026-01-27 04:46:16] 2026-01-27 09:45:59,487 | INFO     | all payload control threads have been joined
[2026-01-27 04:46:16] 2026-01-27 09:45:59,523 | INFO     | [job] queue monitor thread has finished
[2026-01-27 04:46:16] 2026-01-27 09:45:59,524 | INFO     | [job] job monitor thread has finished
[2026-01-27 04:46:16] 2026-01-27 09:45:59,524 | INFO     | [job] retrieve thread has finished
[2026-01-27 04:46:16] 2026-01-27 09:45:59,675 | INFO     | [payload] validate_post thread has finished
[2026-01-27 04:46:16] 2026-01-27 09:46:00,087 | INFO     | all job control threads have been joined
[2026-01-27 04:46:16] 2026-01-27 09:46:00,163 | INFO     | [data] control thread has finished
[2026-01-27 04:46:16] 2026-01-27 09:46:00,327 | INFO     | [job] validate thread has finished
[2026-01-27 04:46:16] 2026-01-27 09:46:00,491 | INFO     | [payload] control thread has finished
[2026-01-27 04:46:16] 2026-01-27 09:46:00,523 | INFO     | [data] copytool_out thread has finished
[2026-01-27 04:46:16] 2026-01-27 09:46:00,587 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 04:46:16] 2026-01-27 09:46:00,631 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 04:46:16] 2026-01-27 09:46:00,679 | INFO     | [payload] failed_post thread has finished
[2026-01-27 04:46:16] 2026-01-27 09:46:00,748 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 04:46:16] 2026-01-27 09:46:00,967 | INFO     | [data] copytool_in thread has finished
[2026-01-27 04:46:16] 2026-01-27 09:46:01,091 | INFO     | [job] control thread has finished
[2026-01-27 04:46:16] 2026-01-27 09:46:01,774 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 04:46:16] 2026-01-27 09:46:03,843 | INFO     | [monitor] cgroup control has ended
[2026-01-27 04:46:16] 2026-01-27 09:46:05,779 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 04:46:16] 2026-01-27 09:46:09,007 | INFO     | job.realtimelogging is not enabled
[2026-01-27 04:46:16] 2026-01-27 09:46:10,011 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 04:46:16] 2026-01-27 09:46:10,973 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139851889878848)>', '<ExcThread(monitor, started 139851663156992)>']
[2026-01-27 04:46:16] 2026-01-27 09:46:11,571 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 04:46:16] 2026-01-27 09:46:11,571 | INFO     | [monitor] control thread has ended
[2026-01-27 04:46:16] 2026-01-27 09:46:15,995 | INFO     | all workflow threads have been joined
[2026-01-27 04:46:16] 2026-01-27 09:46:15,996 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 04:46:16] 2026-01-27 09:46:15,996 | INFO     | traces error code: 0
[2026-01-27 04:46:16] 2026-01-27 09:46:15,996 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 04:46:16] 2026-01-27 09:46:16,092 [wrapper] ==== pilot stdout END ====
[2026-01-27 04:46:16] 2026-01-27 09:46:16,094 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 04:46:16] 2026-01-27 09:46:16,096 [wrapper] pilotpid: 2125923
[2026-01-27 04:46:16] 2026-01-27 09:46:16,098 [wrapper] Pilot exit status: 0
[2026-01-27 04:46:16] 2026-01-27 09:46:16,106 [wrapper] pandaids: 6983305105
[2026-01-27 04:46:16] 2026-01-27 09:46:16,141 [wrapper] cleanup supervisor_pilot 2161149 2125924
[2026-01-27 04:46:16] 2026-01-27 09:46:16,143 [wrapper] Test setup, not cleaning
[2026-01-27 04:46:16] 2026-01-27 09:46:16,145 [wrapper] apfmon messages muted
[2026-01-27 04:46:16] 2026-01-27 09:46:16,147 [wrapper] ==== wrapper stdout END ====
[2026-01-27 04:46:16] 2026-01-27 09:46:16,152 [wrapper] ==== wrapper stderr END ====
[2026-01-27 04:46:16]  *** Error codes and diagnostics ***
[2026-01-27 04:46:16]     "exeErrorCode": 0,
[2026-01-27 04:46:16]     "exeErrorDiag": "",
[2026-01-27 04:46:16]     "pilotErrorCode": 0,
[2026-01-27 04:46:16]     "pilotErrorDiag": "",
[2026-01-27 04:46:16]  *** Listing of results directory ***
[2026-01-27 04:46:16] total 681948
[2026-01-27 04:46:16] -rw-r--r-- 1 boinc boinc    584422 Jan 25 11:28 pilot3.tar.gz
[2026-01-27 04:46:16] -rwx------ 1 boinc boinc     36322 Jan 25 11:32 runpilot2-wrapper.sh
[2026-01-27 04:46:16] -rw-r--r-- 1 boinc boinc      5111 Jan 25 11:35 queuedata.json
[2026-01-27 04:46:16] -rw-r--r-- 1 boinc boinc       100 Jan 27 03:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 04:46:16] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 03:32 run_atlas
[2026-01-27 04:46:16] -rw-r--r-- 1 boinc boinc       105 Jan 27 03:32 job.xml
[2026-01-27 04:46:16] -rw-r--r-- 2 boinc boinc     15845 Jan 27 03:32 start_atlas.sh
[2026-01-27 04:46:16] drwxrwx--x 2 boinc boinc      4096 Jan 27 03:32 shared
[2026-01-27 04:46:16] -rw-r--r-- 2 boinc boinc    597767 Jan 27 03:32 input.tar.gz
[2026-01-27 04:46:16] -rw-r--r-- 1 boinc boinc      7579 Jan 27 03:32 init_data.xml
[2026-01-27 04:46:16] -rw-r--r-- 2 boinc boinc 501759829 Jan 27 03:32 EVNT.48318040._000022.pool.root.1
[2026-01-27 04:46:16] -rw-r--r-- 1 boinc boinc         0 Jan 27 03:32 boinc_lockfile
[2026-01-27 04:46:16] -rw-r--r-- 1 boinc boinc      2532 Jan 27 03:32 pandaJob.out
[2026-01-27 04:46:16] -rw------- 1 boinc boinc        50 Jan 27 03:32 setup.sh.local
[2026-01-27 04:46:16] -rw------- 1 boinc boinc   1003573 Jan 27 03:32 agis_schedconf.cvmfs.json
[2026-01-27 04:46:16] -rw------- 1 boinc boinc   1516246 Jan 27 03:32 agis_ddmendpoints.agis.ALL.json
[2026-01-27 04:46:16] -rw------- 1 boinc boinc       430 Jan 27 03:32 workernode_map.json
[2026-01-27 04:46:16] drwx------ 5 boinc boinc      4096 Jan 27 03:32 pilot3
[2026-01-27 04:46:16] -rw------- 1 boinc boinc 190551468 Jan 27 04:45 HITS.48318042._001063.pool.root.1
[2026-01-27 04:46:16] -rw-r--r-- 1 boinc boinc       530 Jan 27 04:45 boinc_task_state.xml
[2026-01-27 04:46:16] -rw------- 1 boinc boinc      1028 Jan 27 04:45 memory_monitor_summary.json
[2026-01-27 04:46:16] -rw------- 1 boinc boinc    373794 Jan 27 04:45 log.48318042._001063.job.log.tgz.1
[2026-01-27 04:46:16] -rw------- 1 boinc boinc        95 Jan 27 04:45 pilot_heartbeat.json
[2026-01-27 04:46:16] -rw------- 1 boinc boinc      6331 Jan 27 04:45 heartbeat.json
[2026-01-27 04:46:16] -rw-r--r-- 1 boinc boinc        27 Jan 27 04:46 wrapper_checkpoint.txt
[2026-01-27 04:46:16] -rw-r--r-- 1 boinc boinc      8192 Jan 27 04:46 boinc_mmap_file
[2026-01-27 04:46:16] -rw------- 1 boinc boinc      4628 Jan 27 04:46 pilotlog.txt
[2026-01-27 04:46:16] -rw------- 1 boinc boinc    657415 Jan 27 04:46 log.48318042._001063.job.log.1
[2026-01-27 04:46:16] -rw------- 1 boinc boinc       357 Jan 27 04:46 output.list
[2026-01-27 04:46:16] -rw-r--r-- 1 boinc boinc       620 Jan 27 04:46 runtime_log
[2026-01-27 04:46:16] -rw------- 1 boinc boinc   1044480 Jan 27 04:46 result.tar.gz
[2026-01-27 04:46:16] -rw-r--r-- 1 boinc boinc      9403 Jan 27 04:46 runtime_log.err
[2026-01-27 04:46:16] -rw------- 1 boinc boinc       650 Jan 27 04:46 34JNDm5CI48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZ27KDmY2O3zm.diag
[2026-01-27 04:46:16] -rw-r--r-- 1 boinc boinc     21243 Jan 27 04:46 stderr.txt
[2026-01-27 04:46:16] HITS file was successfully produced:
[2026-01-27 04:46:16] -rw------- 1 boinc boinc 190551468 Jan 27 04:45 shared/HITS.pool.root.1
[2026-01-27 04:46:16]  *** Contents of shared directory: ***
[2026-01-27 04:46:16] total 677716
[2026-01-27 04:46:16] -rw-r--r-- 2 boinc boinc     15845 Jan 27 03:32 start_atlas.sh
[2026-01-27 04:46:16] -rw-r--r-- 2 boinc boinc    597767 Jan 27 03:32 input.tar.gz
[2026-01-27 04:46:16] -rw-r--r-- 2 boinc boinc 501759829 Jan 27 03:32 ATLAS.root_0
[2026-01-27 04:46:16] -rw------- 1 boinc boinc 190551468 Jan 27 04:45 HITS.pool.root.1
[2026-01-27 04:46:16] -rw------- 1 boinc boinc   1044480 Jan 27 04:46 result.tar.gz
04:46:18 (2121467): run_atlas exited; CPU time 46531.686075
04:46:18 (2121467): called boinc_finish(0)

</stderr_txt>
]]>

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