Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:47:27 (1163357): wrapper (7.7.26015): starting
01:47:27 (1163357): wrapper: running run_atlas (--nthreads 3)
[2026-01-27 01:47:27] Arguments: --nthreads 3
[2026-01-27 01:47:27] Threads: 3
[2026-01-27 01:47:27] Checking for CVMFS
[2026-01-27 01:47:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 01:47:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 01:47:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 01:47:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 01:47:28] 2.9.2.0 3955128 9097 86792 155567 0 50 16365228 36864000 0 130560 0 4005457 99.987 291938 5758 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-27 01:47:28] CVMFS is ok
[2026-01-27 01:47:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 01:47:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 01:47:28] Further information can be found at the LHC@home message board.
[2026-01-27 01:47:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 01:47:28] Checking for apptainer binary...
[2026-01-27 01:47:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 01:47:28] Running /usr/bin/apptainer --version
[2026-01-27 01:47:28] apptainer version 1.4.1-1.1
[2026-01-27 01:47:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 01:47:28] thA332
[2026-01-27 01:47:28] apptainer works
[2026-01-27 01:47:28] Set ATHENA_PROC_NUMBER=3
[2026-01-27 01:47:28] Set ATHENA_CORE_NUMBER=3
[2026-01-27 01:47:28] Starting ATLAS job with PandaID=6982916233
[2026-01-27 01:47:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 03:09:57]  *** The last 200 lines of the pilot log: ***
[2026-01-27 03:09:57] 2026-01-27 02:09:39,804 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 03:09:57] 2026-01-27 02:09:39,804 | INFO     | **************************************
[2026-01-27 03:09:57] 2026-01-27 02:09:39,804 | INFO     | 
[2026-01-27 03:09:57] 2026-01-27 02:09:39,805 | INFO     | architecture information:
[2026-01-27 03:09:57] 2026-01-27 02:09:39,805 | INFO     | executing command: cat /etc/os-release
[2026-01-27 03:09:57] 2026-01-27 02:09:39,813 | INFO     | cat /etc/os-release:
[2026-01-27 03:09:57] NAME="CentOS Linux"
[2026-01-27 03:09:57] VERSION="7 (Core)"
[2026-01-27 03:09:57] ID="centos"
[2026-01-27 03:09:57] ID_LIKE="rhel fedora"
[2026-01-27 03:09:57] VERSION_ID="7"
[2026-01-27 03:09:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 03:09:57] ANSI_COLOR="0;31"
[2026-01-27 03:09:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 03:09:57] HOME_URL="https://www.centos.org/"
[2026-01-27 03:09:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 03:09:57] 
[2026-01-27 03:09:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 03:09:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 03:09:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 03:09:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 03:09:57] 
[2026-01-27 03:09:57] 2026-01-27 02:09:39,814 | INFO     | **************************************
[2026-01-27 03:09:57] 2026-01-27 02:09:40,317 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-27 03:09:57] 2026-01-27 02:09:40,330 | INFO     | sufficient remaining disk space (239903703040 B)
[2026-01-27 03:09:57] 2026-01-27 02:09:40,330 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 03:09:57] 2026-01-27 02:09:40,330 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 03:09:57] 2026-01-27 02:09:40,330 | INFO     | update_server=False
[2026-01-27 03:09:57] 2026-01-27 02:09:40,330 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 03:09:57] 2026-01-27 02:09:40,330 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-27 03:09:57] 2026-01-27 02:09:40,330 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 03:09:57] 2026-01-27 02:09:40,330 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 03:09:57] 2026-01-27 02:09:40,330 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 03:09:57] 2026-01-27 02:09:40,330 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 03:09:57] 2026-01-27 02:09:40,454 | INFO     | all data control threads have been joined
[2026-01-27 03:09:57] 2026-01-27 02:09:40,596 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 03:09:57] 2026-01-27 02:09:40,596 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 03:09:57] 2026-01-27 02:09:40,597 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 03:09:57] 2026-01-27 02:09:40,597 | INFO     | will abort loop
[2026-01-27 03:09:57] 2026-01-27 02:09:40,766 | INFO     | all payload control threads have been joined
[2026-01-27 03:09:57] 2026-01-27 02:09:41,269 | INFO     | all job control threads have been joined
[2026-01-27 03:09:57] 2026-01-27 02:09:41,335 | INFO     | [job] retrieve thread has finished
[2026-01-27 03:09:57] 2026-01-27 02:09:41,378 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 03:09:57] 2026-01-27 02:09:41,434 | INFO     | [data] copytool_in thread has finished
[2026-01-27 03:09:57] 2026-01-27 02:09:41,460 | INFO     | [data] control thread has finished
[2026-01-27 03:09:57] 2026-01-27 02:09:41,602 | INFO     | [job] job monitor thread has finished
[2026-01-27 03:09:57] 2026-01-27 02:09:41,772 | INFO     | [payload] control thread has finished
[2026-01-27 03:09:57] 2026-01-27 02:09:42,275 | INFO     | [job] control thread has finished
[2026-01-27 03:09:57] 2026-01-27 02:09:42,323 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 03:09:57] 2026-01-27 02:09:42,335 | INFO     | [data] copytool_out thread has finished
[2026-01-27 03:09:57] 2026-01-27 02:09:42,737 | INFO     | [job] validate thread has finished
[2026-01-27 03:09:57] 2026-01-27 02:09:42,737 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 03:09:57] 2026-01-27 02:09:42,757 | INFO     | [payload] validate_post thread has finished
[2026-01-27 03:09:57] 2026-01-27 02:09:42,860 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 03:09:57] 2026-01-27 02:09:42,899 | INFO     | [payload] failed_post thread has finished
[2026-01-27 03:09:57] 2026-01-27 02:09:43,255 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 03:09:57] 2026-01-27 02:09:43,608 | INFO     | [monitor] cgroup control has ended
[2026-01-27 03:09:57] 2026-01-27 02:09:44,261 | INFO     | [job] queue monitor thread has finished
[2026-01-27 03:09:57] 2026-01-27 02:09:46,867 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 03:09:57] 2026-01-27 02:09:50,425 | INFO     | job.realtimelogging is not enabled
[2026-01-27 03:09:57] 2026-01-27 02:09:51,431 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 03:09:57] 2026-01-27 02:09:51,927 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140488849155904)>', '<ExcThread(monitor, started 140488229246720)>']
[2026-01-27 03:09:57] 2026-01-27 02:09:52,390 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 03:09:57] 2026-01-27 02:09:52,390 | INFO     | [monitor] control thread has ended
[2026-01-27 03:09:57] 2026-01-27 02:09:56,953 | INFO     | all workflow threads have been joined
[2026-01-27 03:09:57] 2026-01-27 02:09:56,954 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 03:09:57] 2026-01-27 02:09:56,954 | INFO     | traces error code: 0
[2026-01-27 03:09:57] 2026-01-27 02:09:56,954 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 03:09:57] 2026-01-27 02:09:57,003 [wrapper] ==== pilot stdout END ====
[2026-01-27 03:09:57] 2026-01-27 02:09:57,006 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 03:09:57] 2026-01-27 02:09:57,008 [wrapper] pilotpid: 1167396
[2026-01-27 03:09:57] 2026-01-27 02:09:57,010 [wrapper] Pilot exit status: 0
[2026-01-27 03:09:57] 2026-01-27 02:09:57,017 [wrapper] pandaids: 6982916233
[2026-01-27 03:09:57] 2026-01-27 02:09:57,033 [wrapper] cleanup supervisor_pilot 1176873 1167397
[2026-01-27 03:09:57] 2026-01-27 02:09:57,035 [wrapper] Test setup, not cleaning
[2026-01-27 03:09:57] 2026-01-27 02:09:57,038 [wrapper] apfmon messages muted
[2026-01-27 03:09:57] 2026-01-27 02:09:57,040 [wrapper] ==== wrapper stdout END ====
[2026-01-27 03:09:57] 2026-01-27 02:09:57,042 [wrapper] ==== wrapper stderr END ====
[2026-01-27 03:09:57]  *** Error codes and diagnostics ***
[2026-01-27 03:09:57]     "exeErrorCode": 0,
[2026-01-27 03:09:57]     "exeErrorDiag": "",
[2026-01-27 03:09:57]     "pilotErrorCode": 0,
[2026-01-27 03:09:57]     "pilotErrorDiag": "",
[2026-01-27 03:09:57]  *** Listing of results directory ***
[2026-01-27 03:09:57] total 674004
[2026-01-27 03:09:57] -rw-r--r-- 1 boinc boinc      5111 Jan 25 10:42 queuedata.json
[2026-01-27 03:09:57] -rw-r--r-- 1 boinc boinc    584422 Jan 25 10:42 pilot3.tar.gz
[2026-01-27 03:09:57] -rwx------ 1 boinc boinc     36322 Jan 25 10:42 runpilot2-wrapper.sh
[2026-01-27 03:09:57] -rw-r--r-- 1 boinc boinc       100 Jan 27 01:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 03:09:57] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 01:47 run_atlas
[2026-01-27 03:09:57] -rw-r--r-- 1 boinc boinc       105 Jan 27 01:47 job.xml
[2026-01-27 03:09:57] -rw-r--r-- 2 boinc boinc 502739855 Jan 27 01:47 EVNT.48310721._000138.pool.root.1
[2026-01-27 03:09:57] -rw-r--r-- 2 boinc boinc    597761 Jan 27 01:47 input.tar.gz
[2026-01-27 03:09:57] -rw-r--r-- 2 boinc boinc     15845 Jan 27 01:47 start_atlas.sh
[2026-01-27 03:09:57] drwxrwx--x 2 boinc boinc      4096 Jan 27 01:47 shared
[2026-01-27 03:09:57] -rw-r--r-- 1 boinc boinc         0 Jan 27 01:47 boinc_setup_complete
[2026-01-27 03:09:57] -rw-r--r-- 1 boinc boinc      6439 Jan 27 01:47 init_data.xml
[2026-01-27 03:09:57] -rw-r--r-- 1 boinc boinc         0 Jan 27 01:47 boinc_lockfile
[2026-01-27 03:09:57] -rw-r--r-- 1 boinc boinc      2534 Jan 27 01:47 pandaJob.out
[2026-01-27 03:09:57] -rw------- 1 boinc boinc   1006441 Jan 27 01:47 agis_schedconf.cvmfs.json
[2026-01-27 03:09:57] -rw------- 1 boinc boinc   1516246 Jan 27 01:47 agis_ddmendpoints.agis.ALL.json
[2026-01-27 03:09:57] -rw------- 1 boinc boinc       427 Jan 27 01:47 workernode_map.json
[2026-01-27 03:09:57] drwx------ 5 boinc boinc      4096 Jan 27 01:47 pilot3
[2026-01-27 03:09:57] -rw------- 1 boinc boinc        95 Jan 27 03:08 pilot_heartbeat.json
[2026-01-27 03:09:57] -rw------- 1 boinc boinc 181500885 Jan 27 03:09 HITS.48310724._006889.pool.root.1
[2026-01-27 03:09:57] -rw-r--r-- 1 boinc boinc       530 Jan 27 03:09 boinc_task_state.xml
[2026-01-27 03:09:57] -rw------- 1 boinc boinc      1019 Jan 27 03:09 memory_monitor_summary.json
[2026-01-27 03:09:57] -rw------- 1 boinc boinc    284736 Jan 27 03:09 log.48310724._006889.job.log.tgz.1
[2026-01-27 03:09:57] -rw------- 1 boinc boinc      6314 Jan 27 03:09 heartbeat.json
[2026-01-27 03:09:57] -rw-r--r-- 1 boinc boinc      8192 Jan 27 03:09 boinc_mmap_file
[2026-01-27 03:09:57] -rw-r--r-- 1 boinc boinc        27 Jan 27 03:09 wrapper_checkpoint.txt
[2026-01-27 03:09:57] -rw------- 1 boinc boinc      4810 Jan 27 03:09 pilotlog.txt
[2026-01-27 03:09:57] -rw------- 1 boinc boinc    721371 Jan 27 03:09 log.48310724._006889.job.log.1
[2026-01-27 03:09:57] -rw------- 1 boinc boinc       357 Jan 27 03:09 output.list
[2026-01-27 03:09:57] -rw-r--r-- 1 boinc boinc       620 Jan 27 03:09 runtime_log
[2026-01-27 03:09:57] -rw------- 1 boinc boinc   1024000 Jan 27 03:09 result.tar.gz
[2026-01-27 03:09:57] -rw-r--r-- 1 boinc boinc      8896 Jan 27 03:09 runtime_log.err
[2026-01-27 03:09:57] -rw------- 1 boinc boinc       657 Jan 27 03:09 bMuKDmioB48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSW0KDmEsyoJo.diag
[2026-01-27 03:09:57] -rw-r--r-- 1 boinc boinc      9471 Jan 27 03:09 stderr.txt
[2026-01-27 03:09:57] HITS file was successfully produced:
[2026-01-27 03:09:57] -rw------- 1 boinc boinc 181500885 Jan 27 03:09 shared/HITS.pool.root.1
[2026-01-27 03:09:57]  *** Contents of shared directory: ***
[2026-01-27 03:09:57] total 669812
[2026-01-27 03:09:57] -rw-r--r-- 2 boinc boinc 502739855 Jan 27 01:47 ATLAS.root_0
[2026-01-27 03:09:57] -rw-r--r-- 2 boinc boinc    597761 Jan 27 01:47 input.tar.gz
[2026-01-27 03:09:57] -rw-r--r-- 2 boinc boinc     15845 Jan 27 01:47 start_atlas.sh
[2026-01-27 03:09:57] -rw------- 1 boinc boinc 181500885 Jan 27 03:09 HITS.pool.root.1
[2026-01-27 03:09:57] -rw------- 1 boinc boinc   1024000 Jan 27 03:09 result.tar.gz
03:09:58 (1163357): run_atlas exited; CPU time 14118.799101
03:09:58 (1163357): called boinc_finish(0)

</stderr_txt>
]]>

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