Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:28:16 (2645647): wrapper (7.7.26015): starting
16:28:16 (2645647): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 16:28:16] Arguments: --nthreads 12
[2026-01-26 16:28:16] Threads: 12
[2026-01-26 16:28:16] Checking for CVMFS
[2026-01-26 16:28:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 16:28:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 16:28:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 16:28:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 16:28:17] 2.13.3.0 3240885 3929 62052 155564 0 188 5339941 6144000 5279 130560 0 11717301 99.997 145323 309 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-26 16:28:17] CVMFS is ok
[2026-01-26 16:28:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 16:28:17] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-26 16:28:17] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-26 16:28:17] Further information can be found at the LHC@home message board.
[2026-01-26 16:28:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 16:28:17] Checking for apptainer binary...
[2026-01-26 16:28:17] apptainer is not installed, using version from CVMFS
[2026-01-26 16:28:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 16:28:18] XeonFire
[2026-01-26 16:28:18] apptainer works
[2026-01-26 16:28:18] Set ATHENA_PROC_NUMBER=12
[2026-01-26 16:28:18] Set ATHENA_CORE_NUMBER=12
[2026-01-26 16:28:18] Starting ATLAS job with PandaID=6983602379
[2026-01-26 16:28:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 18:15:19]  *** The last 200 lines of the pilot log: ***
[2026-01-26 18:15:19] 2026-01-27 00:14:45,059 | INFO     | job 6983602379 has finished - writing final server update
[2026-01-26 18:15:19] 2026-01-27 00:14:45,060 | INFO     | total number of processed events: 400 (read)
[2026-01-26 18:15:19] 2026-01-27 00:14:45,069 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6983602379/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 18:15:19] 2026-01-27 00:14:45,069 | INFO     | extracted standard info from prmon json
[2026-01-26 18:15:19] 2026-01-27 00:14:45,069 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 18:15:19] 2026-01-27 00:14:45,069 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 18:15:19] 2026-01-27 00:14:45,070 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 18:15:19] 2026-01-27 00:14:45,070 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 18:15:19] 2026-01-27 00:14:45,072 | INFO     | fitting pss+swap vs Time
[2026-01-26 18:15:19] 2026-01-27 00:14:45,073 | INFO     | sum of square deviations: 348769330.0
[2026-01-26 18:15:19] 2026-01-27 00:14:45,073 | INFO     | sum of deviations: 30065283866.000008
[2026-01-26 18:15:19] 2026-01-27 00:14:45,073 | INFO     | mean x: 1769469693.5
[2026-01-26 18:15:19] 2026-01-27 00:14:45,073 | INFO     | mean y: 2608801.5576923075
[2026-01-26 18:15:19] 2026-01-27 00:14:45,073 | INFO     | intersect: -152532617353.10886
[2026-01-26 18:15:19] 2026-01-27 00:14:45,074 | INFO     | chi2: 3.242020461292238
[2026-01-26 18:15:19] 2026-01-27 00:14:45,074 | INFO     | sum of square deviations: 300842850.0
[2026-01-26 18:15:19] 2026-01-27 00:14:45,075 | INFO     | sum of deviations: 28713320431.0
[2026-01-26 18:15:19] 2026-01-27 00:14:45,075 | INFO     | mean x: 1769469541.0
[2026-01-26 18:15:19] 2026-01-27 00:14:45,075 | INFO     | mean y: 2604496.373737374
[2026-01-26 18:15:19] 2026-01-27 00:14:45,075 | INFO     | intersect: -168880737499.71323
[2026-01-26 18:15:19] 2026-01-27 00:14:45,075 | INFO     | chi2: 3.2465896707639263
[2026-01-26 18:15:19] 2026-01-27 00:14:45,075 | INFO     | current chi2=3.2465896707639263 (change=-0.14093709543915842 %)
[2026-01-26 18:15:19] 2026-01-27 00:14:45,075 | INFO     | right removable region: 98
[2026-01-26 18:15:19] 2026-01-27 00:14:45,076 | INFO     | sum of square deviations: 300842850.0
[2026-01-26 18:15:19] 2026-01-27 00:14:45,076 | INFO     | sum of deviations: 1261158285.9999995
[2026-01-26 18:15:19] 2026-01-27 00:14:45,076 | INFO     | mean x: 1769469846.0
[2026-01-26 18:15:19] 2026-01-27 00:14:45,076 | INFO     | mean y: 2700123.474747475
[2026-01-26 18:15:19] 2026-01-27 00:14:45,077 | INFO     | intersect: -7415064859.5057125
[2026-01-26 18:15:19] 2026-01-27 00:14:45,077 | INFO     | chi2: 0.4126891672701883
[2026-01-26 18:15:19] 2026-01-27 00:14:45,077 | INFO     | current chi2=0.4126891672701883 (change=87.27061805446797 %)
[2026-01-26 18:15:19] 2026-01-27 00:14:45,077 | INFO     | sum of square deviations: 257521107.5
[2026-01-26 18:15:19] 2026-01-27 00:14:45,078 | INFO     | sum of deviations: -8258537978.5
[2026-01-26 18:15:19] 2026-01-27 00:14:45,078 | INFO     | mean x: 1769469998.5
[2026-01-26 18:15:19] 2026-01-27 00:14:45,078 | INFO     | mean y: 2733259.095744681
[2026-01-26 18:15:19] 2026-01-27 00:14:45,078 | INFO     | intersect: 56748509658.91411
[2026-01-26 18:15:19] 2026-01-27 00:14:45,078 | INFO     | chi2: 0.03656400340935165
[2026-01-26 18:15:19] 2026-01-27 00:14:45,078 | INFO     | current chi2=0.03656400340935165 (change=91.14006222862324 %)
[2026-01-26 18:15:19] 2026-01-27 00:14:45,079 | INFO     | sum of square deviations: 218571540.0
[2026-01-26 18:15:19] 2026-01-27 00:14:45,079 | INFO     | sum of deviations: -7078839123.000001
[2026-01-26 18:15:19] 2026-01-27 00:14:45,079 | INFO     | mean x: 1769470151.0
[2026-01-26 18:15:19] 2026-01-27 00:14:45,079 | INFO     | mean y: 2728584.179775281
[2026-01-26 18:15:19] 2026-01-27 00:14:45,079 | INFO     | intersect: 57310256050.37927
[2026-01-26 18:15:19] 2026-01-27 00:14:45,080 | INFO     | chi2: 0.03583330712008581
[2026-01-26 18:15:19] 2026-01-27 00:14:45,080 | INFO     | current chi2=0.03583330712008581 (change=1.9984034053529072 %)
[2026-01-26 18:15:19] 2026-01-27 00:14:45,080 | INFO     | left removable region: 30
[2026-01-26 18:15:19] 2026-01-27 00:14:45,080 | INFO     | sum of square deviations: 97479037.0
[2026-01-26 18:15:19] 2026-01-27 00:14:45,080 | INFO     | sum of deviations: -1520772486.5000002
[2026-01-26 18:15:19] 2026-01-27 00:14:45,081 | INFO     | mean x: 1769470425.5
[2026-01-26 18:15:19] 2026-01-27 00:14:45,081 | INFO     | mean y: 2701942.5147058824
[2026-01-26 18:15:19] 2026-01-27 00:14:45,081 | INFO     | intersect: 27608246904.718716
[2026-01-26 18:15:19] 2026-01-27 00:14:45,081 | INFO     | chi2: 0.020123643705407895
[2026-01-26 18:15:19] 2026-01-27 00:14:45,081 | INFO     | current memory leak: -15.60 B/s (using 68 data points, chi2=0.02)
[2026-01-26 18:15:19] 2026-01-27 00:14:45,081 | INFO     | could have reported an average CPU frequency of 2549 MHz (7 samples)
[2026-01-26 18:15:19] 2026-01-27 00:14:45,082 | INFO     | ..............................
[2026-01-26 18:15:19] 2026-01-27 00:14:45,082 | INFO     | . Timing measurements:
[2026-01-26 18:15:19] 2026-01-27 00:14:45,082 | INFO     | . get job = 0 s
[2026-01-26 18:15:19] 2026-01-27 00:14:45,082 | INFO     | . initial setup = 21 s
[2026-01-26 18:15:19] 2026-01-27 00:14:45,082 | INFO     | . payload setup = 6 s
[2026-01-26 18:15:19] 2026-01-27 00:14:45,082 | INFO     | . stage-in = 0 s
[2026-01-26 18:15:19] 2026-01-27 00:14:45,082 | INFO     | . payload execution = 6330 s
[2026-01-26 18:15:19] 2026-01-27 00:14:45,082 | INFO     | . stage-out = 1 s
[2026-01-26 18:15:19] 2026-01-27 00:14:45,082 | INFO     | . log creation = 0 s
[2026-01-26 18:15:19] 2026-01-27 00:14:45,082 | INFO     | ..............................
[2026-01-26 18:15:19] 2026-01-27 00:14:45,547 | INFO     | 
[2026-01-26 18:15:19] 2026-01-27 00:14:45,547 | INFO     | job summary report
[2026-01-26 18:15:19] 2026-01-27 00:14:45,547 | INFO     | --------------------------------------------------
[2026-01-26 18:15:19] 2026-01-27 00:14:45,547 | INFO     | PanDA job id: 6983602379
[2026-01-26 18:15:19] 2026-01-27 00:14:45,547 | INFO     | task id: 48329616
[2026-01-26 18:15:19] 2026-01-27 00:14:45,547 | INFO     | errors: (none)
[2026-01-26 18:15:19] 2026-01-27 00:14:45,548 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 18:15:19] 2026-01-27 00:14:45,548 | INFO     | pilot state: finished 
[2026-01-26 18:15:19] 2026-01-27 00:14:45,548 | INFO     | transexitcode: 0
[2026-01-26 18:15:19] 2026-01-27 00:14:45,548 | INFO     | exeerrorcode: 0
[2026-01-26 18:15:19] 2026-01-27 00:14:45,548 | INFO     | exeerrordiag: 
[2026-01-26 18:15:19] 2026-01-27 00:14:45,548 | INFO     | exitcode: 0
[2026-01-26 18:15:19] 2026-01-27 00:14:45,548 | INFO     | exitmsg: OK
[2026-01-26 18:15:19] 2026-01-27 00:14:45,548 | INFO     | cpuconsumptiontime: 66508 s
[2026-01-26 18:15:19] 2026-01-27 00:14:45,548 | INFO     | nevents: 400
[2026-01-26 18:15:19] 2026-01-27 00:14:45,549 | INFO     | neventsw: 0
[2026-01-26 18:15:19] 2026-01-27 00:14:45,549 | INFO     | pid: 2654519
[2026-01-26 18:15:19] 2026-01-27 00:14:45,549 | INFO     | pgrp: 2654519
[2026-01-26 18:15:19] 2026-01-27 00:14:45,549 | INFO     | corecount: 12
[2026-01-26 18:15:19] 2026-01-27 00:14:45,549 | INFO     | event service: False
[2026-01-26 18:15:19] 2026-01-27 00:14:45,549 | INFO     | sizes: {0: 2283930, 1: 2284391, 11: 2284391, 6340: 2311112, 6341: 2320124, 6342: 2320180, 6344: 2320502}
[2026-01-26 18:15:19] 2026-01-27 00:14:45,549 | INFO     | --------------------------------------------------
[2026-01-26 18:15:19] 2026-01-27 00:14:45,549 | INFO     | 
[2026-01-26 18:15:19] 2026-01-27 00:14:45,550 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-01-26 18:15:19] 2026-01-27 00:14:45,565 | INFO     | time since job start (6356s) is within the limit (349056.0s)
[2026-01-26 18:15:19] 2026-01-27 00:14:45,609 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 18:15:19] 2026-01-27 00:14:45,609 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 18:15:19] 2026-01-27 00:14:45,609 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 18:15:19] 2026-01-27 00:14:45,609 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 18:15:19] 2026-01-27 00:14:45,609 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 18:15:19] 2026-01-27 00:14:45,610 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 18:15:19] 2026-01-27 00:14:45,610 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 18:15:19] 2026-01-27 00:14:45,610 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 18:15:19] 2026-01-27 00:14:45,610 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 18:15:19] 2026-01-27 00:14:45,610 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 18:15:19] 2026-01-27 00:14:45,610 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 18:15:19] 2026-01-27 00:14:45,610 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 18:15:19] 2026-01-27 00:14:45,610 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 18:15:19] 2026-01-27 00:14:45,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 18:15:19] 2026-01-27 00:14:45,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 18:15:19] 2026-01-27 00:14:45,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 18:15:19] 2026-01-27 00:14:45,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 18:15:19] 2026-01-27 00:14:45,611 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 18:15:19] 2026-01-27 00:14:45,611 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 18:15:19] 2026-01-27 00:14:45,611 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 18:15:19] 2026-01-27 00:14:45,612 | INFO     | job 6983602379 has completed (purged errors)
[2026-01-26 18:15:19] 2026-01-27 00:14:45,612 | INFO     | overall cleanup function is called
[2026-01-26 18:15:19] 2026-01-27 00:14:46,620 | INFO     | --- collectZombieJob: --- 10, [2654519]
[2026-01-26 18:15:19] 2026-01-27 00:14:46,620 | INFO     | zombie collector waiting for pid 2654519
[2026-01-26 18:15:19] 2026-01-27 00:14:46,621 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 18:15:19] 2026-01-27 00:14:46,621 | INFO     | collected zombie processes
[2026-01-26 18:15:19] 2026-01-27 00:14:46,621 | INFO     | will attempt to kill all subprocesses of pid=2654519
[2026-01-26 18:15:19] 2026-01-27 00:14:47,076 | INFO     | process IDs to be killed: [2654519] (in reverse order)
[2026-01-26 18:15:19] 2026-01-27 00:14:47,267 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 18:15:19] 2026-01-27 00:14:47,268 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 18:15:19] 2026-01-27 00:14:47,279 | INFO     | did not find any defunct processes belonging to 2654519
[2026-01-26 18:15:19] 2026-01-27 00:14:47,288 | INFO     | did not find any defunct processes belonging to 2654519
[2026-01-26 18:15:19] 2026-01-27 00:14:47,288 | INFO     | ready for new job
[2026-01-26 18:15:19] 2026-01-27 00:14:47,288 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 18:15:19] 2026-01-27 00:14:47,290 | INFO     | **************************************
[2026-01-26 18:15:19] 2026-01-27 00:14:47,290 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 18:15:19] 2026-01-27 00:14:47,290 | INFO     | **************************************
[2026-01-26 18:15:19] 2026-01-27 00:14:47,290 | INFO     | 
[2026-01-26 18:15:19] 2026-01-27 00:14:47,295 | INFO     | architecture information:
[2026-01-26 18:15:19] 2026-01-27 00:14:47,296 | INFO     | executing command: cat /etc/os-release
[2026-01-26 18:15:19] 2026-01-27 00:14:47,314 | INFO     | cat /etc/os-release:
[2026-01-26 18:15:19] NAME="CentOS Linux"
[2026-01-26 18:15:19] VERSION="7 (Core)"
[2026-01-26 18:15:19] ID="centos"
[2026-01-26 18:15:19] ID_LIKE="rhel fedora"
[2026-01-26 18:15:19] VERSION_ID="7"
[2026-01-26 18:15:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 18:15:19] ANSI_COLOR="0;31"
[2026-01-26 18:15:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 18:15:19] HOME_URL="https://www.centos.org/"
[2026-01-26 18:15:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 18:15:19] 
[2026-01-26 18:15:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 18:15:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 18:15:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 18:15:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 18:15:19] 
[2026-01-26 18:15:19] 2026-01-27 00:14:47,315 | INFO     | **************************************
[2026-01-26 18:15:19] 2026-01-27 00:14:47,818 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-01-26 18:15:19] 2026-01-27 00:14:47,837 | INFO     | sufficient remaining disk space (1657729449984 B)
[2026-01-26 18:15:19] 2026-01-27 00:14:47,837 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 18:15:19] 2026-01-27 00:14:47,837 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 18:15:19] 2026-01-27 00:14:47,837 | INFO     | update_server=False
[2026-01-26 18:15:19] 2026-01-27 00:14:47,837 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 18:15:19] 2026-01-27 00:14:47,838 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 18:15:19] 2026-01-27 00:14:47,838 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 18:15:19] 2026-01-27 00:14:47,838 | INFO     | aborting loop
[2026-01-26 18:15:19] 2026-01-27 00:14:47,866 | INFO     | all data control threads have been joined
[2026-01-26 18:15:19] 2026-01-27 00:14:48,272 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 18:15:19] 2026-01-27 00:14:48,671 | INFO     | all payload control threads have been joined
[2026-01-26 18:15:19] 2026-01-27 00:14:48,842 | INFO     | [job] job monitor thread has finished
[2026-01-26 18:15:19] 2026-01-27 00:14:48,843 | INFO     | [job] retrieve thread has finished
[2026-01-26 18:15:19] 2026-01-27 00:14:48,871 | INFO     | [data] control thread has finished
[2026-01-26 18:15:19] 2026-01-27 00:14:49,279 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 18:15:19] 2026-01-27 00:14:49,481 | INFO     | all job control threads have been joined
[2026-01-26 18:15:19] 2026-01-27 00:14:49,618 | INFO     | [job] validate thread has finished
[2026-01-26 18:15:19] 2026-01-27 00:14:49,676 | INFO     | [payload] control thread has finished
[2026-01-26 18:15:19] 2026-01-27 00:14:49,843 | INFO     | [data] copytool_out thread has finished
[2026-01-26 18:15:19] 2026-01-27 00:14:49,867 | INFO     | [payload] validate_post thread has finished
[2026-01-26 18:15:19] 2026-01-27 00:14:49,944 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 18:15:19] 2026-01-27 00:14:50,048 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 18:15:19] 2026-01-27 00:14:50,171 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 18:15:19] 2026-01-27 00:14:50,278 | INFO     | [data] copytool_in thread has finished
[2026-01-26 18:15:19] 2026-01-27 00:14:50,405 | INFO     | [payload] failed_post thread has finished
[2026-01-26 18:15:19] 2026-01-27 00:14:50,486 | INFO     | [job] control thread has finished
[2026-01-26 18:15:19] 2026-01-27 00:14:51,176 | INFO     | [job] queue monitor thread has finished
[2026-01-26 18:15:19] 2026-01-27 00:14:52,277 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 18:15:19] 2026-01-27 00:14:58,334 | INFO     | job.realtimelogging is not enabled
[2026-01-26 18:15:19] 2026-01-27 00:14:58,723 | INFO     | [monitor] cgroup control has ended
[2026-01-26 18:15:19] 2026-01-27 00:14:59,336 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 18:15:19] 2026-01-27 00:15:01,172 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126126620702528)>', '<ExcThread(monitor, started 126125934110464)>']
[2026-01-26 18:15:19] 2026-01-27 00:15:06,198 | INFO     | all workflow threads have been joined
[2026-01-26 18:15:19] 2026-01-27 00:15:06,198 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 18:15:19] 2026-01-27 00:15:06,198 | INFO     | traces error code: 0
[2026-01-26 18:15:19] 2026-01-27 00:15:06,198 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 18:15:19] 2026-01-27 00:15:19,102 | INFO     | PID=2649705 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 18:15:19] 2026-01-27 00:15:19,102 | INFO     | .. there are 5 such processes running
[2026-01-26 18:15:19] 2026-01-27 00:15:19,103 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 18:15:19] 2026-01-27 00:15:19,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 18:15:19] 2026-01-27 00:15:19,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 18:15:19] 2026-01-27 00:15:19,103 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 18:15:19] 2026-01-27 00:15:19,103 | INFO     | [monitor] control thread has ended
[2026-01-26 18:15:19] 2026-01-27 00:15:19,194 [wrapper] ==== pilot stdout END ====
[2026-01-26 18:15:19] 2026-01-27 00:15:19,200 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 18:15:19] 2026-01-27 00:15:19,203 [wrapper] pilotpid: 2649705
[2026-01-26 18:15:19] 2026-01-27 00:15:19,206 [wrapper] Pilot exit status: 0
[2026-01-26 18:15:19] 2026-01-27 00:15:19,222 [wrapper] pandaids: 6983602379
[2026-01-26 18:15:19] 2026-01-27 00:15:19,307 [wrapper] cleanup supervisor_pilot 2721682 2649706
[2026-01-26 18:15:19] 2026-01-27 00:15:19,311 [wrapper] Test setup, not cleaning
[2026-01-26 18:15:19] 2026-01-27 00:15:19,314 [wrapper] apfmon messages muted
[2026-01-26 18:15:19] 2026-01-27 00:15:19,318 [wrapper] ==== wrapper stdout END ====
[2026-01-26 18:15:19] 2026-01-27 00:15:19,320 [wrapper] ==== wrapper stderr END ====
[2026-01-26 18:15:19]  *** Error codes and diagnostics ***
[2026-01-26 18:15:19]     "exeErrorCode": 0,
[2026-01-26 18:15:19]     "exeErrorDiag": "",
[2026-01-26 18:15:19]     "pilotErrorCode": 0,
[2026-01-26 18:15:19]     "pilotErrorDiag": "",
[2026-01-26 18:15:19]  *** Listing of results directory ***
[2026-01-26 18:15:19] total 463376
[2026-01-26 18:15:19] -rw-r--r-- 1 mark mark    584422 Jan 25 19:12 pilot3.tar.gz
[2026-01-26 18:15:19] -rwx------ 1 mark mark     36322 Jan 25 19:15 runpilot2-wrapper.sh
[2026-01-26 18:15:19] -rw-r--r-- 1 mark mark      5111 Jan 25 19:18 queuedata.json
[2026-01-26 18:15:19] -rw-rw-r-- 1 mark mark       100 Jan 26 16:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 18:15:19] -rwxr-xr-x 1 mark mark      7986 Jan 26 16:28 run_atlas
[2026-01-26 18:15:19] -rw-rw-r-- 1 mark mark       105 Jan 26 16:28 job.xml
[2026-01-26 18:15:19] -rw-r--r-- 2 mark mark 273174023 Jan 26 16:28 EVNT.48329614._000003.pool.root.1
[2026-01-26 18:15:19] -rw-r--r-- 2 mark mark     15845 Jan 26 16:28 start_atlas.sh
[2026-01-26 18:15:19] drwxrwx--x 2 mark mark      4096 Jan 26 16:28 shared
[2026-01-26 18:15:19] -rw-r--r-- 2 mark mark    597772 Jan 26 16:28 input.tar.gz
[2026-01-26 18:15:19] -rw-rw-r-- 1 mark mark      9264 Jan 26 16:28 init_data.xml
[2026-01-26 18:15:19] -rw-rw-r-- 1 mark mark         0 Jan 26 16:28 boinc_setup_complete
[2026-01-26 18:15:19] -rw-rw-r-- 1 mark mark         0 Jan 26 16:28 boinc_lockfile
[2026-01-26 18:15:19] -rw-rw-r-- 1 mark mark      2606 Jan 26 16:28 pandaJob.out
[2026-01-26 18:15:19] -rw------- 1 mark mark   1006433 Jan 26 16:28 agis_schedconf.cvmfs.json
[2026-01-26 18:15:19] -rw------- 1 mark mark   1516246 Jan 26 16:28 agis_ddmendpoints.agis.ALL.json
[2026-01-26 18:15:19] -rw------- 1 mark mark       431 Jan 26 16:28 workernode_map.json
[2026-01-26 18:15:19] drwx------ 5 mark mark      4096 Jan 26 16:28 pilot3
[2026-01-26 18:15:19] -rw------- 1 mark mark 194721293 Jan 26 18:14 HITS.48329616._000069.pool.root.1
[2026-01-26 18:15:19] -rw-rw-r-- 1 mark mark       529 Jan 26 18:14 boinc_task_state.xml
[2026-01-26 18:15:19] -rw------- 1 mark mark      1034 Jan 26 18:14 memory_monitor_summary.json
[2026-01-26 18:15:19] -rw------- 1 mark mark    419428 Jan 26 18:14 log.48329616._000069.job.log.tgz.1
[2026-01-26 18:15:19] -rw------- 1 mark mark      6328 Jan 26 18:14 heartbeat.json
[2026-01-26 18:15:19] -rw-rw-r-- 1 mark mark      8192 Jan 26 18:15 boinc_mmap_file
[2026-01-26 18:15:19] -rw-rw-r-- 1 mark mark        27 Jan 26 18:15 wrapper_checkpoint.txt
[2026-01-26 18:15:19] -rw------- 1 mark mark       822 Jan 26 18:15 pilotlog.txt
[2026-01-26 18:15:19] -rw------- 1 mark mark        95 Jan 26 18:15 pilot_heartbeat.json
[2026-01-26 18:15:19] -rw------- 1 mark mark    912852 Jan 26 18:15 log.48329616._000069.job.log.1
[2026-01-26 18:15:19] -rw------- 1 mark mark       357 Jan 26 18:15 output.list
[2026-01-26 18:15:19] -rw-rw-r-- 1 mark mark       620 Jan 26 18:15 runtime_log
[2026-01-26 18:15:19] -rw------- 1 mark mark   1351680 Jan 26 18:15 result.tar.gz
[2026-01-26 18:15:19] -rw-rw-r-- 1 mark mark      8886 Jan 26 18:15 runtime_log.err
[2026-01-26 18:15:19] -rw------- 1 mark mark       645 Jan 26 18:15 HoNLDmONQ48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZH2KDmPXUGqm.diag
[2026-01-26 18:15:19] -rw-rw-r-- 1 mark mark     21157 Jan 26 18:15 stderr.txt
[2026-01-26 18:15:19] HITS file was successfully produced:
[2026-01-26 18:15:19] -rw------- 1 mark mark 194721293 Jan 26 18:14 shared/HITS.pool.root.1
[2026-01-26 18:15:19]  *** Contents of shared directory: ***
[2026-01-26 18:15:19] total 458856
[2026-01-26 18:15:19] -rw-r--r-- 2 mark mark 273174023 Jan 26 16:28 ATLAS.root_0
[2026-01-26 18:15:19] -rw-r--r-- 2 mark mark     15845 Jan 26 16:28 start_atlas.sh
[2026-01-26 18:15:19] -rw-r--r-- 2 mark mark    597772 Jan 26 16:28 input.tar.gz
[2026-01-26 18:15:19] -rw------- 1 mark mark 194721293 Jan 26 18:14 HITS.pool.root.1
[2026-01-26 18:15:19] -rw------- 1 mark mark   1351680 Jan 26 18:15 result.tar.gz
18:15:22 (2645647): run_atlas exited; CPU time 66824.330039
18:15:22 (2645647): called boinc_finish(0)

</stderr_txt>
]]>

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