Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:39:44 (22943): wrapper (7.7.26015): starting
05:39:44 (22943): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 05:39:44] Arguments: --nthreads 8
[2026-01-26 05:39:44] Threads: 8
[2026-01-26 05:39:44] Checking for CVMFS
[2026-01-26 05:39:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 05:39:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 05:39:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 05:39:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 05:39:45] 2.11.2.0 2989 161033 127320 155543 1 49 12402727 20275200 1 130560 0 44024742 99.848 10531897 28444 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 05:39:45] CVMFS is ok
[2026-01-26 05:39:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 05:39:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 05:39:45] Further information can be found at the LHC@home message board.
[2026-01-26 05:39:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 05:39:45] Checking for apptainer binary...
[2026-01-26 05:39:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 05:39:45] Running /usr/bin/apptainer --version
[2026-01-26 05:39:45] apptainer version 1.3.2-1.el7
[2026-01-26 05:39:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 05:39:46] c-204-24.aglt2.org
[2026-01-26 05:39:46] apptainer works
[2026-01-26 05:39:46] Set ATHENA_PROC_NUMBER=8
[2026-01-26 05:39:46] Set ATHENA_CORE_NUMBER=8
[2026-01-26 05:39:46] Starting ATLAS job with PandaID=6983602147
[2026-01-26 05:39:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 10:32:46]  *** The last 200 lines of the pilot log: ***
[2026-01-26 10:32:46] 2026-01-26 15:32:21,324 | INFO     | job 6983602147 has state=finished
[2026-01-26 10:32:46] 2026-01-26 15:32:21,324 | INFO     | preparing for final server update for job 6983602147 in state='finished'
[2026-01-26 10:32:46] 2026-01-26 15:32:21,421 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-26 10:32:46] 2026-01-26 15:32:21,422 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6983602147/jobReport.json
[2026-01-26 10:32:46] 2026-01-26 15:32:21,424 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-26 10:32:46] 2026-01-26 15:32:21,424 | INFO     | this job has now completed (state=finished)
[2026-01-26 10:32:46] 2026-01-26 15:32:21,424 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 10:32:46] 2026-01-26 15:32:21,424 | INFO     | log transfer has been attempted: DONE
[2026-01-26 10:32:46] 2026-01-26 15:32:21,424 | INFO     | job 6983602147 has finished - writing final server update
[2026-01-26 10:32:46] 2026-01-26 15:32:21,425 | INFO     | total number of processed events: 400 (read)
[2026-01-26 10:32:46] 2026-01-26 15:32:21,426 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983602147/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 10:32:46] 2026-01-26 15:32:21,427 | INFO     | extracted standard info from prmon json
[2026-01-26 10:32:46] 2026-01-26 15:32:21,427 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 10:32:46] 2026-01-26 15:32:21,427 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 10:32:46] 2026-01-26 15:32:21,427 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 10:32:46] 2026-01-26 15:32:21,428 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 10:32:46] 2026-01-26 15:32:21,432 | INFO     | fitting pss+swap vs Time
[2026-01-26 10:32:46] 2026-01-26 15:32:21,432 | INFO     | sum of square deviations: 7330245804.996491
[2026-01-26 10:32:46] 2026-01-26 15:32:21,434 | INFO     | sum of deviations: 18365965994.121956
[2026-01-26 10:32:46] 2026-01-26 15:32:21,435 | INFO     | mean x: 1769432761.0034842
[2026-01-26 10:32:46] 2026-01-26 15:32:21,435 | INFO     | mean y: 2504402.8780487804
[2026-01-26 10:32:46] 2026-01-26 15:32:21,435 | INFO     | intersect: -4430817859.702048
[2026-01-26 10:32:46] 2026-01-26 15:32:21,435 | INFO     | chi2: 1.5442562397084352
[2026-01-26 10:32:46] 2026-01-26 15:32:21,436 | INFO     | sum of square deviations: 6953764632.496458
[2026-01-26 10:32:46] 2026-01-26 15:32:21,438 | INFO     | sum of deviations: 17950448283.758877
[2026-01-26 10:32:46] 2026-01-26 15:32:21,438 | INFO     | mean x: 1769432608.503546
[2026-01-26 10:32:46] 2026-01-26 15:32:21,438 | INFO     | mean y: 2504234.7411347516
[2026-01-26 10:32:46] 2026-01-26 15:32:21,438 | INFO     | intersect: -4565109167.373198
[2026-01-26 10:32:46] 2026-01-26 15:32:21,438 | INFO     | chi2: 1.544654751128945
[2026-01-26 10:32:46] 2026-01-26 15:32:21,439 | INFO     | current chi2=1.544654751128945 (change=-0.025806042434063974 %)
[2026-01-26 10:32:46] 2026-01-26 15:32:21,439 | INFO     | right removable region: 281
[2026-01-26 10:32:46] 2026-01-26 15:32:21,439 | INFO     | sum of square deviations: 6953764022.496458
[2026-01-26 10:32:46] 2026-01-26 15:32:21,441 | INFO     | sum of deviations: -23680869359.652508
[2026-01-26 10:32:46] 2026-01-26 15:32:21,441 | INFO     | mean x: 1769432913.503546
[2026-01-26 10:32:46] 2026-01-26 15:32:21,442 | INFO     | mean y: 2521290.6524822693
[2026-01-26 10:32:46] 2026-01-26 15:32:21,442 | INFO     | intersect: 6028280797.2719965
[2026-01-26 10:32:46] 2026-01-26 15:32:21,442 | INFO     | chi2: 0.14456702845984484
[2026-01-26 10:32:46] 2026-01-26 15:32:21,442 | INFO     | current chi2=0.14456702845984484 (change=90.63840412345428 %)
[2026-01-26 10:32:46] 2026-01-26 15:32:21,443 | INFO     | sum of square deviations: 6590398764.996376
[2026-01-26 10:32:46] 2026-01-26 15:32:21,445 | INFO     | sum of deviations: -23295552061.78699
[2026-01-26 10:32:46] 2026-01-26 15:32:21,445 | INFO     | mean x: 1769433066.0036101
[2026-01-26 10:32:46] 2026-01-26 15:32:21,445 | INFO     | mean y: 2521106.7870036103
[2026-01-26 10:32:46] 2026-01-26 15:32:21,445 | INFO     | intersect: 6257062232.259727
[2026-01-26 10:32:46] 2026-01-26 15:32:21,445 | INFO     | chi2: 0.12888349904818336
[2026-01-26 10:32:46] 2026-01-26 15:32:21,446 | INFO     | current chi2=0.12888349904818336 (change=10.848621278826219 %)
[2026-01-26 10:32:46] 2026-01-26 15:32:21,446 | INFO     | left removable region: 20
[2026-01-26 10:32:46] 2026-01-26 15:32:21,446 | INFO     | sum of square deviations: 5513064832.9961815
[2026-01-26 10:32:46] 2026-01-26 15:32:21,448 | INFO     | sum of deviations: -4175638011.563219
[2026-01-26 10:32:46] 2026-01-26 15:32:21,448 | INFO     | mean x: 1769433188.0038314
[2026-01-26 10:32:46] 2026-01-26 15:32:21,448 | INFO     | mean y: 2512570.563218391
[2026-01-26 10:32:46] 2026-01-26 15:32:21,448 | INFO     | intersect: 1342694974.10206
[2026-01-26 10:32:46] 2026-01-26 15:32:21,449 | INFO     | chi2: 0.059193158379761246
[2026-01-26 10:32:46] 2026-01-26 15:32:21,449 | INFO     | current memory leak: -0.76 B/s (using 261 data points, chi2=0.06)
[2026-01-26 10:32:46] 2026-01-26 15:32:21,449 | INFO     | could have reported an average CPU frequency of 1679 MHz (13 samples)
[2026-01-26 10:32:46] 2026-01-26 15:32:21,449 | INFO     | ..............................
[2026-01-26 10:32:46] 2026-01-26 15:32:21,450 | INFO     | . Timing measurements:
[2026-01-26 10:32:46] 2026-01-26 15:32:21,450 | INFO     | . get job = 0 s
[2026-01-26 10:32:46] 2026-01-26 15:32:21,450 | INFO     | . initial setup = 8 s
[2026-01-26 10:32:46] 2026-01-26 15:32:21,450 | INFO     | . payload setup = 8 s
[2026-01-26 10:32:46] 2026-01-26 15:32:21,450 | INFO     | . stage-in = 0 s
[2026-01-26 10:32:46] 2026-01-26 15:32:21,450 | INFO     | . payload execution = 17498 s
[2026-01-26 10:32:46] 2026-01-26 15:32:21,450 | INFO     | . stage-out = 2 s
[2026-01-26 10:32:46] 2026-01-26 15:32:21,450 | INFO     | . log creation = 0 s
[2026-01-26 10:32:46] 2026-01-26 15:32:21,450 | INFO     | ..............................
[2026-01-26 10:32:46] 2026-01-26 15:32:21,535 | INFO     | 
[2026-01-26 10:32:46] 2026-01-26 15:32:21,535 | INFO     | job summary report
[2026-01-26 10:32:46] 2026-01-26 15:32:21,535 | INFO     | --------------------------------------------------
[2026-01-26 10:32:46] 2026-01-26 15:32:21,535 | INFO     | PanDA job id: 6983602147
[2026-01-26 10:32:46] 2026-01-26 15:32:21,536 | INFO     | task id: 48329784
[2026-01-26 10:32:46] 2026-01-26 15:32:21,536 | INFO     | errors: (none)
[2026-01-26 10:32:46] 2026-01-26 15:32:21,536 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 10:32:46] 2026-01-26 15:32:21,536 | INFO     | pilot state: finished 
[2026-01-26 10:32:46] 2026-01-26 15:32:21,536 | INFO     | transexitcode: 0
[2026-01-26 10:32:46] 2026-01-26 15:32:21,537 | INFO     | exeerrorcode: 0
[2026-01-26 10:32:46] 2026-01-26 15:32:21,537 | INFO     | exeerrordiag: 
[2026-01-26 10:32:46] 2026-01-26 15:32:21,537 | INFO     | exitcode: 0
[2026-01-26 10:32:46] 2026-01-26 15:32:21,537 | INFO     | exitmsg: OK
[2026-01-26 10:32:46] 2026-01-26 15:32:21,537 | INFO     | cpuconsumptiontime: 132508 s
[2026-01-26 10:32:46] 2026-01-26 15:32:21,537 | INFO     | nevents: 400
[2026-01-26 10:32:46] 2026-01-26 15:32:21,538 | INFO     | neventsw: 0
[2026-01-26 10:32:46] 2026-01-26 15:32:21,538 | INFO     | pid: 31195
[2026-01-26 10:32:46] 2026-01-26 15:32:21,538 | INFO     | pgrp: 31195
[2026-01-26 10:32:46] 2026-01-26 15:32:21,538 | INFO     | corecount: 8
[2026-01-26 10:32:46] 2026-01-26 15:32:21,538 | INFO     | event service: False
[2026-01-26 10:32:46] 2026-01-26 15:32:21,538 | INFO     | sizes: {0: 2284237, 1: 2284443, 11: 2284471, 17510: 2316671, 17511: 2316670, 17514: 2325724, 17517: 2325908, 17519: 2326102}
[2026-01-26 10:32:46] 2026-01-26 15:32:21,539 | INFO     | --------------------------------------------------
[2026-01-26 10:32:46] 2026-01-26 15:32:21,539 | INFO     | 
[2026-01-26 10:32:46] 2026-01-26 15:32:21,539 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 10:32:46] 2026-01-26 15:32:21,568 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 10:32:46] 2026-01-26 15:32:21,569 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 10:32:46] 2026-01-26 15:32:21,569 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 10:32:46] 2026-01-26 15:32:21,569 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 10:32:46] 2026-01-26 15:32:21,569 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 10:32:46] 2026-01-26 15:32:21,569 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 10:32:46] 2026-01-26 15:32:21,570 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 10:32:46] 2026-01-26 15:32:21,570 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 10:32:46] 2026-01-26 15:32:21,570 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 10:32:46] 2026-01-26 15:32:21,570 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 10:32:46] 2026-01-26 15:32:21,570 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 10:32:46] 2026-01-26 15:32:21,571 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 10:32:46] 2026-01-26 15:32:21,571 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 10:32:46] 2026-01-26 15:32:21,571 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 10:32:46] 2026-01-26 15:32:21,571 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 10:32:46] 2026-01-26 15:32:21,571 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 10:32:46] 2026-01-26 15:32:21,571 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 10:32:46] 2026-01-26 15:32:21,572 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 10:32:46] 2026-01-26 15:32:21,572 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 10:32:46] 2026-01-26 15:32:21,572 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 10:32:46] 2026-01-26 15:32:21,572 | INFO     | job 6983602147 has completed (purged errors)
[2026-01-26 10:32:46] 2026-01-26 15:32:21,572 | INFO     | overall cleanup function is called
[2026-01-26 10:32:46] 2026-01-26 15:32:22,308 | INFO     | PID=26624 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 10:32:46] 2026-01-26 15:32:22,581 | INFO     | --- collectZombieJob: --- 10, [31195]
[2026-01-26 10:32:46] 2026-01-26 15:32:22,581 | INFO     | zombie collector waiting for pid 31195
[2026-01-26 10:32:46] 2026-01-26 15:32:22,581 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 10:32:46] 2026-01-26 15:32:22,582 | INFO     | collected zombie processes
[2026-01-26 10:32:46] 2026-01-26 15:32:22,582 | INFO     | will attempt to kill all subprocesses of pid=31195
[2026-01-26 10:32:46] 2026-01-26 15:32:22,669 | INFO     | process IDs to be killed: [31195] (in reverse order)
[2026-01-26 10:32:46] 2026-01-26 15:32:22,732 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 10:32:46] 2026-01-26 15:32:22,732 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 10:32:46] 2026-01-26 15:32:22,736 | INFO     | did not find any defunct processes belonging to 31195
[2026-01-26 10:32:46] 2026-01-26 15:32:22,740 | INFO     | did not find any defunct processes belonging to 31195
[2026-01-26 10:32:46] 2026-01-26 15:32:22,741 | INFO     | ready for new job
[2026-01-26 10:32:46] 2026-01-26 15:32:22,741 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 10:32:46] 2026-01-26 15:32:22,743 | INFO     | **************************************
[2026-01-26 10:32:46] 2026-01-26 15:32:22,743 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 10:32:46] 2026-01-26 15:32:22,743 | INFO     | **************************************
[2026-01-26 10:32:46] 2026-01-26 15:32:22,743 | INFO     | 
[2026-01-26 10:32:46] 2026-01-26 15:32:22,744 | INFO     | architecture information:
[2026-01-26 10:32:46] 2026-01-26 15:32:22,745 | INFO     | executing command: cat /etc/os-release
[2026-01-26 10:32:46] 2026-01-26 15:32:22,764 | INFO     | cat /etc/os-release:
[2026-01-26 10:32:46] NAME="CentOS Linux"
[2026-01-26 10:32:46] VERSION="7 (Core)"
[2026-01-26 10:32:46] ID="centos"
[2026-01-26 10:32:46] ID_LIKE="rhel fedora"
[2026-01-26 10:32:46] VERSION_ID="7"
[2026-01-26 10:32:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 10:32:46] ANSI_COLOR="0;31"
[2026-01-26 10:32:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 10:32:46] HOME_URL="https://www.centos.org/"
[2026-01-26 10:32:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 10:32:46] 
[2026-01-26 10:32:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 10:32:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 10:32:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 10:32:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 10:32:46] 
[2026-01-26 10:32:46] 2026-01-26 15:32:22,765 | INFO     | **************************************
[2026-01-26 10:32:46] 2026-01-26 15:32:23,268 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 10:32:46] 2026-01-26 15:32:23,288 | INFO     | sufficient remaining disk space (18571329536 B)
[2026-01-26 10:32:46] 2026-01-26 15:32:23,289 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 10:32:46] 2026-01-26 15:32:23,289 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 10:32:46] 2026-01-26 15:32:23,289 | INFO     | update_server=False
[2026-01-26 10:32:46] 2026-01-26 15:32:23,290 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 10:32:46] 2026-01-26 15:32:23,290 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 10:32:46] 2026-01-26 15:32:23,291 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 10:32:46] 2026-01-26 15:32:23,291 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-26 10:32:46] 2026-01-26 15:32:23,292 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 10:32:46] 2026-01-26 15:32:23,292 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 10:32:46] 2026-01-26 15:32:23,292 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 10:32:46] 2026-01-26 15:32:23,491 | INFO     | all job control threads have been joined
[2026-01-26 10:32:46] 2026-01-26 15:32:23,798 | INFO     | all data control threads have been joined
[2026-01-26 10:32:46] 2026-01-26 15:32:23,956 | INFO     | all payload control threads have been joined
[2026-01-26 10:32:46] 2026-01-26 15:32:24,284 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 10:32:46] 2026-01-26 15:32:24,284 | INFO     | aborting loop
[2026-01-26 10:32:46] 2026-01-26 15:32:24,295 | INFO     | [job] retrieve thread has finished
[2026-01-26 10:32:46] 2026-01-26 15:32:24,297 | INFO     | [job] queue monitor thread has finished
[2026-01-26 10:32:46] 2026-01-26 15:32:24,340 | INFO     | [job] validate thread has finished
[2026-01-26 10:32:46] 2026-01-26 15:32:24,359 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 10:32:46] 2026-01-26 15:32:24,497 | INFO     | [job] control thread has finished
[2026-01-26 10:32:46] 2026-01-26 15:32:24,609 | INFO     | [payload] failed_post thread has finished
[2026-01-26 10:32:46] 2026-01-26 15:32:24,799 | INFO     | [data] control thread has finished
[2026-01-26 10:32:46] 2026-01-26 15:32:24,882 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 10:32:46] 2026-01-26 15:32:24,962 | INFO     | [payload] control thread has finished
[2026-01-26 10:32:46] 2026-01-26 15:32:25,287 | INFO     | [job] job monitor thread has finished
[2026-01-26 10:32:46] 2026-01-26 15:32:25,295 | INFO     | [data] copytool_out thread has finished
[2026-01-26 10:32:46] 2026-01-26 15:32:25,362 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 10:32:46] 2026-01-26 15:32:25,583 | INFO     | [data] copytool_in thread has finished
[2026-01-26 10:32:46] 2026-01-26 15:32:25,654 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 10:32:46] 2026-01-26 15:32:25,676 | INFO     | [payload] validate_post thread has finished
[2026-01-26 10:32:46] 2026-01-26 15:32:29,660 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 10:32:46] 2026-01-26 15:32:33,664 | INFO     | job.realtimelogging is not enabled
[2026-01-26 10:32:46] 2026-01-26 15:32:34,670 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 10:32:46] 2026-01-26 15:32:39,677 | INFO     | [monitor] cgroup control has ended
[2026-01-26 10:32:46] 2026-01-26 15:32:41,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140549190891328)>', '<ExcThread(monitor, started 140548736263936)>']
[2026-01-26 10:32:46] 2026-01-26 15:32:41,380 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 10:32:46] 2026-01-26 15:32:41,380 | INFO     | [monitor] control thread has ended
[2026-01-26 10:32:46] 2026-01-26 15:32:46,364 | INFO     | all workflow threads have been joined
[2026-01-26 10:32:46] 2026-01-26 15:32:46,364 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 10:32:46] 2026-01-26 15:32:46,364 | INFO     | traces error code: 0
[2026-01-26 10:32:46] 2026-01-26 15:32:46,365 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 10:32:46] 2026-01-26 15:32:46,468 [wrapper] ==== pilot stdout END ====
[2026-01-26 10:32:46] 2026-01-26 15:32:46,473 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 10:32:46] 2026-01-26 15:32:46,477 [wrapper] pilotpid: 26624
[2026-01-26 10:32:46] 2026-01-26 15:32:46,482 [wrapper] Pilot exit status: 0
[2026-01-26 10:32:46] 2026-01-26 15:32:46,501 [wrapper] pandaids: 6983602147
[2026-01-26 10:32:46] 2026-01-26 15:32:46,545 [wrapper] cleanup supervisor_pilot 17628 26625
[2026-01-26 10:32:46] 2026-01-26 15:32:46,550 [wrapper] Test setup, not cleaning
[2026-01-26 10:32:46] 2026-01-26 15:32:46,555 [wrapper] apfmon messages muted
[2026-01-26 10:32:46] 2026-01-26 15:32:46,559 [wrapper] ==== wrapper stdout END ====
[2026-01-26 10:32:46] 2026-01-26 15:32:46,564 [wrapper] ==== wrapper stderr END ====
[2026-01-26 10:32:46]  *** Error codes and diagnostics ***
[2026-01-26 10:32:46]     "exeErrorCode": 0,
[2026-01-26 10:32:46]     "exeErrorDiag": "",
[2026-01-26 10:32:46]     "pilotErrorCode": 0,
[2026-01-26 10:32:46]     "pilotErrorDiag": "",
[2026-01-26 10:32:46]  *** Listing of results directory ***
[2026-01-26 10:32:46] total 471400
[2026-01-26 10:32:46] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 20:12 pilot3.tar.gz
[2026-01-26 10:32:46] -rwx------ 1 boincer umatlas     36322 Jan 25 20:15 runpilot2-wrapper.sh
[2026-01-26 10:32:46] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 20:18 queuedata.json
[2026-01-26 10:32:46] -rw-r--r-- 1 boincer umatlas       100 Jan 26 05:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 10:32:46] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 05:39 run_atlas
[2026-01-26 10:32:46] -rw-r--r-- 1 boincer umatlas       105 Jan 26 05:39 job.xml
[2026-01-26 10:32:46] -rw-r--r-- 2 boincer umatlas 273731401 Jan 26 05:39 EVNT.48329782._000003.pool.root.1
[2026-01-26 10:32:46] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 05:39 start_atlas.sh
[2026-01-26 10:32:46] drwxrwx--x 2 boincer umatlas      4096 Jan 26 05:39 shared
[2026-01-26 10:32:46] -rw-r--r-- 2 boincer umatlas    597799 Jan 26 05:39 input.tar.gz
[2026-01-26 10:32:46] -rw-r--r-- 1 boincer umatlas         0 Jan 26 05:39 boinc_lockfile
[2026-01-26 10:32:46] -rw-r--r-- 1 boincer umatlas      2693 Jan 26 05:39 pandaJob.out
[2026-01-26 10:32:46] -rw------- 1 boincer umatlas        57 Jan 26 05:39 setup.sh.local
[2026-01-26 10:32:46] -rw------- 1 boincer umatlas   1004246 Jan 26 05:40 agis_schedconf.cvmfs.json
[2026-01-26 10:32:46] -rw------- 1 boincer umatlas       433 Jan 26 05:40 workernode_map.json
[2026-01-26 10:32:46] drwx------ 5 boincer umatlas      4096 Jan 26 05:40 pilot3
[2026-01-26 10:32:46] -rw------- 1 boincer umatlas 199176983 Jan 26 10:31 HITS.48329784._000073.pool.root.1
[2026-01-26 10:32:46] -rw-r--r-- 1 boincer umatlas       531 Jan 26 10:31 boinc_task_state.xml
[2026-01-26 10:32:46] -rw-r--r-- 1 boincer umatlas      5912 Jan 26 10:31 init_data.xml
[2026-01-26 10:32:46] -rw------- 1 boincer umatlas      1056 Jan 26 10:32 memory_monitor_summary.json
[2026-01-26 10:32:46] -rw------- 1 boincer umatlas   1516246 Jan 26 10:32 agis_ddmendpoints.agis.ALL.json
[2026-01-26 10:32:46] -rw------- 1 boincer umatlas    518422 Jan 26 10:32 log.48329784._000073.job.log.tgz.1
[2026-01-26 10:32:46] -rw------- 1 boincer umatlas      6406 Jan 26 10:32 heartbeat.json
[2026-01-26 10:32:46] -rw------- 1 boincer umatlas        95 Jan 26 10:32 pilot_heartbeat.json
[2026-01-26 10:32:46] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 10:32 boinc_mmap_file
[2026-01-26 10:32:46] -rw-r--r-- 1 boincer umatlas        29 Jan 26 10:32 wrapper_checkpoint.txt
[2026-01-26 10:32:46] -rw------- 1 boincer umatlas      4620 Jan 26 10:32 pilotlog.txt
[2026-01-26 10:32:46] -rw------- 1 boincer umatlas   2416203 Jan 26 10:32 log.48329784._000073.job.log.1
[2026-01-26 10:32:46] -rw------- 1 boincer umatlas       357 Jan 26 10:32 output.list
[2026-01-26 10:32:46] -rw-r--r-- 1 boincer umatlas       620 Jan 26 10:32 runtime_log
[2026-01-26 10:32:46] -rw------- 1 boincer umatlas   2949120 Jan 26 10:32 result.tar.gz
[2026-01-26 10:32:46] -rw-r--r-- 1 boincer umatlas      9342 Jan 26 10:32 runtime_log.err
[2026-01-26 10:32:46] -rw------- 1 boincer umatlas       664 Jan 26 10:32 oqeMDmONQ48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRI2KDm9osTIn.diag
[2026-01-26 10:32:46] -rw-r--r-- 1 boincer umatlas     21344 Jan 26 10:32 stderr.txt
[2026-01-26 10:32:46] HITS file was successfully produced:
[2026-01-26 10:32:46] -rw------- 1 boincer umatlas 199176983 Jan 26 10:31 shared/HITS.pool.root.1
[2026-01-26 10:32:46]  *** Contents of shared directory: ***
[2026-01-26 10:32:46] total 465312
[2026-01-26 10:32:46] -rw-r--r-- 2 boincer umatlas 273731401 Jan 26 05:39 ATLAS.root_0
[2026-01-26 10:32:46] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 05:39 start_atlas.sh
[2026-01-26 10:32:46] -rw-r--r-- 2 boincer umatlas    597799 Jan 26 05:39 input.tar.gz
[2026-01-26 10:32:46] -rw------- 1 boincer umatlas 199176983 Jan 26 10:31 HITS.pool.root.1
[2026-01-26 10:32:46] -rw------- 1 boincer umatlas   2949120 Jan 26 10:32 result.tar.gz
10:32:47 (22943): run_atlas exited; CPU time 132452.694394
10:32:47 (22943): called boinc_finish(0)

</stderr_txt>
]]>

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