Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-26 10:39:04 (10168): vboxwrapper version 26210
2026-01-26 10:39:04 (10168): BOINC client version: 7.20.2
2026-01-26 10:39:04 (10168): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2026-01-26 10:39:05 (10168): Successfully copied 'init_data.xml' to the shared directory.
2026-01-26 10:39:05 (10168): Create VM. (boinc_ac142654d8a19fa7, slot#13)
2026-01-26 10:39:05 (10168): Setting Memory Size for VM. (4400MB)
2026-01-26 10:39:06 (10168): Setting CPU Count for VM. (4)
2026-01-26 10:39:06 (10168): Setting Chipset Options for VM.
2026-01-26 10:39:06 (10168): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-26 10:39:06 (10168): Setting Boot Options for VM.
2026-01-26 10:39:07 (10168): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-26 10:39:07 (10168): Enabling VM Network Access.
2026-01-26 10:39:07 (10168): Disabling USB Support for VM.
2026-01-26 10:39:08 (10168): Disabling COM Port Support for VM.
2026-01-26 10:39:08 (10168): Disabling LPT Port Support for VM.
2026-01-26 10:39:08 (10168): Disabling Audio Support for VM.
2026-01-26 10:39:08 (10168): Disabling Clipboard Support for VM.
2026-01-26 10:39:09 (10168): Disabling Drag and Drop Support for VM.
2026-01-26 10:39:09 (10168): Adding storage controller(s) to VM.
2026-01-26 10:39:09 (10168): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-26 10:39:11 (10168): Adding VirtualBox Guest Additions to VM.
2026-01-26 10:39:11 (10168): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-26 10:39:12 (10168): forwarding host port 54337 to guest port 80
2026-01-26 10:39:12 (10168): Enabling remote desktop for VM.
2026-01-26 10:39:12 (10168): Required extension pack not installed, remote desktop not enabled.
2026-01-26 10:39:12 (10168): Enabling shared directory for VM.
2026-01-26 10:39:13 (10168): Starting VM using VBoxManage interface. (boinc_ac142654d8a19fa7, slot#13)
2026-01-26 10:39:19 (10168): Successfully started VM. (PID = '12712')
2026-01-26 10:39:19 (10168): Reporting VM Process ID to BOINC.
2026-01-26 10:39:19 (10168): Guest Log: BIOS: VirtualBox 7.1.6
2026-01-26 10:39:19 (10168): Guest Log: CPUID EDX: 0x178bfbff
2026-01-26 10:39:19 (10168): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-26 10:39:19 (10168): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-26 10:39:19 (10168): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-26 10:39:19 (10168): Detected: Web Application Enabled (http://localhost:54337)
2026-01-26 10:39:19 (10168): Preference change detected
2026-01-26 10:39:19 (10168): Setting CPU throttle for VM. (100%)
2026-01-26 10:39:19 (10168): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-26 10:39:21 (10168): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-26 10:39:21 (10168): Guest Log: BIOS: Booting from Hard Disk...
2026-01-26 10:39:24 (10168): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-26 10:39:24 (10168): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-26 10:39:24 (10168): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-26 10:40:07 (10168): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-26 10:40:07 (10168): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-26 10:40:13 (10168): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-26 10:40:13 (10168): Guest Log: 00:00:00.000163 main     Log opened 2026-01-26T10:40:12.193481000Z
2026-01-26 10:40:13 (10168): Guest Log: 00:00:00.000342 main     OS Product: Linux
2026-01-26 10:40:13 (10168): Guest Log: 00:00:00.000469 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-26 10:40:13 (10168): Guest Log: 00:00:00.000513 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-26 10:40:13 (10168): Guest Log: 00:00:00.000545 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-26 10:40:13 (10168): Guest Log: 00:00:00.000546 main     Process ID: 1317
2026-01-26 10:40:13 (10168): Guest Log: 00:00:00.000547 main     Package type: LINUX_64BITS_GENERIC
2026-01-26 10:40:13 (10168): Guest Log: 00:00:00.001343 main     5.2.32 r132073 started. Verbose level = 0
2026-01-26 10:40:14 (10168): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-26 10:40:14 (10168): Guest Log: [INFO] Mounting shared directory
2026-01-26 10:40:14 (10168): Guest Log: [INFO] Checking for init_data.xml
2026-01-26 10:40:57 (10168): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-26 10:40:57 (10168): Guest Log: [INFO] Detected branch: prod
2026-01-26 10:40:57 (10168): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-26 10:40:57 (10168): Guest Log: Copying input files
2026-01-26 10:41:00 (10168): Guest Log: Copied input files into RunAtlas.
2026-01-26 10:41:00 (10168): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-26 10:41:00 (10168): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-26 10:41:00 (10168): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-26 10:41:00 (10168): Guest Log: Further information can be found at the LHC@home message board.
2026-01-26 10:41:11 (10168): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-26 10:41:11 (10168): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-26 10:41:11 (10168): Guest Log: 2.6.3.0 1597 0 30152 155543 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-26 10:41:12 (10168): Guest Log: copied the webapp to /var/www
2026-01-26 10:41:12 (10168): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-26 10:41:12 (10168): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-26 10:41:12 (10168): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-26 10:41:12 (10168): Guest Log:  *** Starting ATLAS job. (PandaID=6983771656 taskID=48317872) ***
2026-01-26 12:19:34 (10168): Status Report: Elapsed Time: '6000.000000'
2026-01-26 12:19:34 (10168): Status Report: CPU Time: '21867.390625'
2026-01-26 13:59:44 (10168): Status Report: Elapsed Time: '12000.000000'
2026-01-26 13:59:44 (10168): Status Report: CPU Time: '45715.015625'
2026-01-26 14:56:36 (10168): Guest Log:  *** Job finished ***
2026-01-26 14:56:36 (10168): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-26 14:56:36 (10168): Guest Log: 2026-01-26 14:56:06,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-26 14:56:36 (10168): Guest Log: 2026-01-26 14:56:06,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-26 14:56:36 (10168): Guest Log: 2026-01-26 14:56:18,942 | INFO     | [monitor] cgroup control has ended
2026-01-26 14:56:36 (10168): Guest Log: 2026-01-26 14:56:19,461 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140195051071296)>', '<ExcThread(monitor, started 140194091095808)>']
2026-01-26 14:56:36 (10168): Guest Log: 2026-01-26 14:56:19,645 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-26 14:56:36 (10168): Guest Log: 2026-01-26 14:56:19,645 | INFO     | [monitor] control thread has ended
2026-01-26 14:56:36 (10168): Guest Log: 2026-01-26 14:56:24,698 | INFO     | all workflow threads have been joined
2026-01-26 14:56:36 (10168): Guest Log: 2026-01-26 14:56:24,699 | INFO     | end of generic workflow (traces error code: 0)
2026-01-26 14:56:36 (10168): Guest Log: 2026-01-26 14:56:24,699 | INFO     | traces error code: 0
2026-01-26 14:56:36 (10168): Guest Log: 2026-01-26 14:56:24,700 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-26 14:56:36 (10168): Guest Log: 2026-01-26 14:56:24,874 [wrapper] ==== pilot stdout END ====
2026-01-26 14:56:36 (10168): Guest Log: 2026-01-26 14:56:24,880 [wrapper] ==== wrapper stdout RESUME ====
2026-01-26 14:56:36 (10168): Guest Log: 2026-01-26 14:56:24,886 [wrapper] pilotpid: 5992
2026-01-26 14:56:36 (10168): Guest Log: 2026-01-26 14:56:24,892 [wrapper] Pilot exit status: 0
2026-01-26 14:56:36 (10168): Guest Log: 2026-01-26 14:56:25,149 [wrapper] pandaids: 6983771656
2026-01-26 14:56:36 (10168): Guest Log: 2026-01-26 14:56:25,188 [wrapper] cleanup supervisor_pilot 28409 5993
2026-01-26 14:56:36 (10168): Guest Log: 2026-01-26 14:56:25,200 [wrapper] Test setup, not cleaning
2026-01-26 14:56:36 (10168): Guest Log: 2026-01-26 14:56:25,206 [wrapper] apfmon messages muted
2026-01-26 14:56:36 (10168): Guest Log: 2026-01-26 14:56:25,212 [wrapper] ==== wrapper stdout END ====
2026-01-26 14:56:36 (10168): Guest Log: 2026-01-26 14:56:25,217 [wrapper] ==== wrapper stderr END ====
2026-01-26 14:56:36 (10168): Guest Log:  *** Error codes and diagnostics ***
2026-01-26 14:56:36 (10168): Guest Log:     "exeErrorCode": 0,
2026-01-26 14:56:36 (10168): Guest Log:     "exeErrorDiag": "",
2026-01-26 14:56:36 (10168): Guest Log:     "pilotErrorCode": 0,
2026-01-26 14:56:36 (10168): Guest Log:     "pilotErrorDiag": "",
2026-01-26 14:56:36 (10168): Guest Log:  *** Listing of results directory ***
2026-01-26 14:56:36 (10168): Guest Log: total 190236
2026-01-26 14:56:36 (10168): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 26 01:12 pilot3.tar.gz
2026-01-26 14:56:36 (10168): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 26 01:15 runpilot2-wrapper.sh
2026-01-26 14:56:36 (10168): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 26 01:18 queuedata.json
2026-01-26 14:56:36 (10168): Guest Log: -rwxr-xr-x. 1 atlas atlas     10466 Jan 26 10:40 init_data.xml
2026-01-26 14:56:36 (10168): Guest Log: -rwxr-xr-x. 1 atlas atlas    597757 Jan 26 10:40 input.tar.gz
2026-01-26 14:56:36 (10168): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 26 10:40 start_atlas.sh
2026-01-26 14:56:36 (10168): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 26 10:40 EVNT.48317869._000032.pool.root.1 -> /data/./ATLAS.root_0
2026-01-26 14:56:36 (10168): Guest Log: -rw-r--r--. 1 atlas atlas      2513 Jan 26 10:41 pandaJob.out
2026-01-26 14:56:36 (10168): Guest Log: -rw-------. 1 atlas atlas   1004246 Jan 26 10:41 agis_schedconf.cvmfs.json
2026-01-26 14:56:36 (10168): Guest Log: -rw-------. 1 atlas atlas       407 Jan 26 10:42 workernode_map.json
2026-01-26 14:56:36 (10168): Guest Log: drwx------. 5 atlas atlas      4096 Jan 26 10:42 pilot3
2026-01-26 14:56:36 (10168): Guest Log: -rw-------. 1 atlas atlas 185872011 Jan 26 14:54 HITS.48317872._001579.pool.root.1
2026-01-26 14:56:36 (10168): Guest Log: -rw-------. 1 atlas atlas      1031 Jan 26 14:55 memory_monitor_summary.json
2026-01-26 14:56:36 (10168): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 26 14:55 agis_ddmendpoints.agis.ALL.json
2026-01-26 14:56:36 (10168): Guest Log: -rw-------. 1 atlas atlas    416469 Jan 26 14:55 log.48317872._001579.job.log.tgz.1
2026-01-26 14:56:36 (10168): Guest Log: -rw-------. 1 atlas atlas        95 Jan 26 14:55 pilot_heartbeat.json
2026-01-26 14:56:36 (10168): Guest Log: -rw-------. 1 atlas atlas      6312 Jan 26 14:55 heartbeat.json
2026-01-26 14:56:36 (10168): Guest Log: -rw-------. 1 atlas atlas      4801 Jan 26 14:56 pilotlog.txt
2026-01-26 14:56:36 (10168): Guest Log: -rw-------. 1 atlas atlas   2113342 Jan 26 14:56 log.48317872._001579.job.log.1
2026-01-26 14:56:36 (10168): Guest Log: -rw-------. 1 atlas atlas       357 Jan 26 14:56 output.list
2026-01-26 14:56:36 (10168): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 26 14:56 runtime_log
2026-01-26 14:56:36 (10168): Guest Log: -rw-------. 1 atlas atlas   2549760 Jan 26 14:56 result.tar.gz
2026-01-26 14:56:36 (10168): Guest Log: -rw-------. 1 atlas atlas       657 Jan 26 14:56 y2HNDmDNQ48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNo8KDmqLfjJo.diag
2026-01-26 14:56:36 (10168): Guest Log: -rw-r--r--. 1 atlas atlas      8739 Jan 26 14:56 runtime_log.err
2026-01-26 14:56:36 (10168): Guest Log: Looking for outputfile HITS.48317872._001579.pool.root.1
2026-01-26 14:56:36 (10168): Guest Log: HITS file was successfully produced
2026-01-26 14:56:36 (10168): Guest Log: -rw-------. 1 atlas atlas 185872011 Jan 26 14:54 /home/atlas/RunAtlas/HITS.48317872._001579.pool.root.1
2026-01-26 14:56:37 (10168): Guest Log: Successfully finished the ATLAS job!
2026-01-26 14:56:37 (10168): Guest Log: Copying the results back to the shared directory!
2026-01-26 14:56:37 (10168): Guest Log:  *** Contents of shared directory: ***
2026-01-26 14:56:37 (10168): Guest Log: total 663876
2026-01-26 14:56:37 (10168): Guest Log: -rwxrwxrwx. 1 root root 490755828 Jan 26 10:39 ATLAS.root_0
2026-01-26 14:56:37 (10168): Guest Log: -rwxrwxrwx. 1 root root 185872011 Jan 26  2026 HITS.pool.root.1
2026-01-26 14:56:37 (10168): Guest Log: -rwxrwxrwx. 1 root root     10466 Jan 26 10:39 init_data.xml
2026-01-26 14:56:37 (10168): Guest Log: -rwxrwxrwx. 1 root root    597757 Jan 26 10:36 input.tar.gz
2026-01-26 14:56:37 (10168): Guest Log: -rwxrwxrwx. 1 root root   2549760 Jan 26  2026 result.tar.gz
2026-01-26 14:56:37 (10168): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 26 10:36 start_atlas.sh
2026-01-26 14:56:37 (10168): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-26 14:56:37 (10168): VM Completion File Detected.
2026-01-26 14:56:37 (10168): Powering off VM.
2026-01-26 14:56:38 (10168): Successfully stopped VM.
2026-01-26 14:56:38 (10168): Deregistering VM. (boinc_ac142654d8a19fa7, slot#13)
2026-01-26 14:56:38 (10168): Removing network bandwidth throttle group from VM.
2026-01-26 14:56:38 (10168): Removing VM from VirtualBox.
2026-01-26 14:56:43 (10168): called boinc_finish(0)

</stderr_txt>
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