Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:25:30 (26953): wrapper (7.7.26015): starting
05:25:30 (26953): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 05:25:30] Arguments: --nthreads 8
[2026-01-26 05:25:30] Threads: 8
[2026-01-26 05:25:30] Checking for CVMFS
[2026-01-26 05:25:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 05:25:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 05:25:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 05:25:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 05:25:31] 2.11.2.0 6956 205374 143200 155543 2 49 16477637 18432000 1833 130560 0 136449483 99.980 7853598 29684 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 05:25:31] CVMFS is ok
[2026-01-26 05:25:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 05:25:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 05:25:31] Further information can be found at the LHC@home message board.
[2026-01-26 05:25:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 05:25:31] Checking for apptainer binary...
[2026-01-26 05:25:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 05:25:31] Running /usr/bin/apptainer --version
[2026-01-26 05:25:31] apptainer version 1.3.2-1.el7
[2026-01-26 05:25:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 05:25:32] c-206-16.aglt2.org
[2026-01-26 05:25:32] apptainer works
[2026-01-26 05:25:32] Set ATHENA_PROC_NUMBER=8
[2026-01-26 05:25:32] Set ATHENA_CORE_NUMBER=8
[2026-01-26 05:25:32] Starting ATLAS job with PandaID=6983607946
[2026-01-26 05:25:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
08:30:37 (10827): wrapper (7.7.26015): starting
08:30:37 (10827): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 08:30:37] Arguments: --nthreads 8
[2026-01-26 08:30:37] Threads: 8
[2026-01-26 08:30:37] This job has been restarted, cleaning up previous attempt
[2026-01-26 08:30:37] Checking for CVMFS
[2026-01-26 08:30:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 08:30:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 08:30:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 08:30:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 08:30:37] 2.11.2.0 6956 205559 137148 155548 1 11 16517809 18432000 1 130560 0 136608576 99.980 7859336 29687 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 08:30:37] CVMFS is ok
[2026-01-26 08:30:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 08:30:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 08:30:37] Further information can be found at the LHC@home message board.
[2026-01-26 08:30:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 08:30:37] Checking for apptainer binary...
[2026-01-26 08:30:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 08:30:37] Running /usr/bin/apptainer --version
[2026-01-26 08:30:37] apptainer version 1.3.2-1.el7
[2026-01-26 08:30:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 08:30:38] c-206-16.aglt2.org
[2026-01-26 08:30:38] apptainer works
[2026-01-26 08:30:39] Set ATHENA_PROC_NUMBER=8
[2026-01-26 08:30:39] Set ATHENA_CORE_NUMBER=8
[2026-01-26 08:30:39] Starting ATLAS job with PandaID=6983607946
[2026-01-26 08:30:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 12:14:33]  *** The last 200 lines of the pilot log: ***
[2026-01-26 12:14:33] 2026-01-26 17:14:01,649 | INFO     | log transfer has been attempted: DONE
[2026-01-26 12:14:33] 2026-01-26 17:14:01,649 | INFO     | job 6983607946 has finished - writing final server update
[2026-01-26 12:14:33] 2026-01-26 17:14:01,650 | INFO     | total number of processed events: 400 (read)
[2026-01-26 12:14:33] 2026-01-26 17:14:01,654 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6983607946/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 12:14:33] 2026-01-26 17:14:01,655 | INFO     | extracted standard info from prmon json
[2026-01-26 12:14:33] 2026-01-26 17:14:01,655 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 12:14:33] 2026-01-26 17:14:01,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 12:14:33] 2026-01-26 17:14:01,656 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 12:14:33] 2026-01-26 17:14:01,656 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 12:14:33] 2026-01-26 17:14:01,662 | INFO     | fitting pss+swap vs Time
[2026-01-26 12:14:33] 2026-01-26 17:14:01,662 | INFO     | sum of square deviations: 3301699115.0
[2026-01-26 12:14:33] 2026-01-26 17:14:01,664 | INFO     | sum of deviations: 5890238476.5
[2026-01-26 12:14:33] 2026-01-26 17:14:01,665 | INFO     | mean x: 1769440954.5
[2026-01-26 12:14:33] 2026-01-26 17:14:01,665 | INFO     | mean y: 2483432.6772727272
[2026-01-26 12:14:33] 2026-01-26 17:14:01,665 | INFO     | intersect: -3154203118.420157
[2026-01-26 12:14:33] 2026-01-26 17:14:01,665 | INFO     | chi2: 2.3089446319440494
[2026-01-26 12:14:33] 2026-01-26 17:14:01,666 | INFO     | sum of square deviations: 3081657780.0
[2026-01-26 12:14:33] 2026-01-26 17:14:01,668 | INFO     | sum of deviations: 22159593403.000004
[2026-01-26 12:14:33] 2026-01-26 17:14:01,668 | INFO     | mean x: 1769440802.0
[2026-01-26 12:14:33] 2026-01-26 17:14:01,668 | INFO     | mean y: 2494497.865116279
[2026-01-26 12:14:33] 2026-01-26 17:14:01,669 | INFO     | intersect: -12721205381.294806
[2026-01-26 12:14:33] 2026-01-26 17:14:01,669 | INFO     | chi2: 1.3139823280555687
[2026-01-26 12:14:33] 2026-01-26 17:14:01,669 | INFO     | current chi2=1.3139823280555687 (change=43.09164845805583 %)
[2026-01-26 12:14:33] 2026-01-26 17:14:01,670 | INFO     | sum of square deviations: 2871616632.5
[2026-01-26 12:14:33] 2026-01-26 17:14:01,672 | INFO     | sum of deviations: 21666951211.5
[2026-01-26 12:14:33] 2026-01-26 17:14:01,672 | INFO     | mean x: 1769440649.5
[2026-01-26 12:14:33] 2026-01-26 17:14:01,672 | INFO     | mean y: 2494140.119047619
[2026-01-26 12:14:33] 2026-01-26 17:14:01,672 | INFO     | intersect: -13348307561.772604
[2026-01-26 12:14:33] 2026-01-26 17:14:01,673 | INFO     | chi2: 1.3146674374408052
[2026-01-26 12:14:33] 2026-01-26 17:14:01,673 | INFO     | current chi2=1.3146674374408052 (change=-0.05213992384892238 %)
[2026-01-26 12:14:33] 2026-01-26 17:14:01,673 | INFO     | right removable region: 209
[2026-01-26 12:14:33] 2026-01-26 17:14:01,673 | INFO     | sum of square deviations: 3081657780.0
[2026-01-26 12:14:33] 2026-01-26 17:14:01,675 | INFO     | sum of deviations: -25436708359.000008
[2026-01-26 12:14:33] 2026-01-26 17:14:01,676 | INFO     | mean x: 1769441107.0
[2026-01-26 12:14:33] 2026-01-26 17:14:01,676 | INFO     | mean y: 2504929.823255814
[2026-01-26 12:14:33] 2026-01-26 17:14:01,676 | INFO     | intersect: 14607876651.917955
[2026-01-26 12:14:33] 2026-01-26 17:14:01,676 | INFO     | chi2: 1.0392302815477898
[2026-01-26 12:14:33] 2026-01-26 17:14:01,677 | INFO     | current chi2=1.0392302815477898 (change=54.991112945276875 %)
[2026-01-26 12:14:33] 2026-01-26 17:14:01,677 | INFO     | sum of square deviations: 2871616632.5
[2026-01-26 12:14:33] 2026-01-26 17:14:01,679 | INFO     | sum of deviations: -24959745638.0
[2026-01-26 12:14:33] 2026-01-26 17:14:01,679 | INFO     | mean x: 1769441259.5
[2026-01-26 12:14:33] 2026-01-26 17:14:01,679 | INFO     | mean y: 2504579.123809524
[2026-01-26 12:14:33] 2026-01-26 17:14:01,680 | INFO     | intersect: 15382274726.245754
[2026-01-26 12:14:33] 2026-01-26 17:14:01,680 | INFO     | chi2: 1.0393358422074714
[2026-01-26 12:14:33] 2026-01-26 17:14:01,680 | INFO     | current chi2=1.0393358422074714 (change=-0.01015758119792022 %)
[2026-01-26 12:14:33] 2026-01-26 17:14:01,680 | INFO     | left removable region: 20
[2026-01-26 12:14:33] 2026-01-26 17:14:01,681 | INFO     | sum of square deviations: 2093397390.0
[2026-01-26 12:14:33] 2026-01-26 17:14:01,682 | INFO     | sum of deviations: -5615795541.999999
[2026-01-26 12:14:33] 2026-01-26 17:14:01,683 | INFO     | mean x: 1769441229.0
[2026-01-26 12:14:33] 2026-01-26 17:14:01,683 | INFO     | mean y: 2514417.2486772486
[2026-01-26 12:14:33] 2026-01-26 17:14:01,683 | INFO     | intersect: 4749257779.5537195
[2026-01-26 12:14:33] 2026-01-26 17:14:01,683 | INFO     | chi2: 0.01841027858774357
[2026-01-26 12:14:33] 2026-01-26 17:14:01,684 | INFO     | current memory leak: -2.68 B/s (using 189 data points, chi2=0.02)
[2026-01-26 12:14:33] 2026-01-26 17:14:01,684 | INFO     | could have reported an average CPU frequency of 2372 MHz (11 samples)
[2026-01-26 12:14:33] 2026-01-26 17:14:01,685 | INFO     | ..............................
[2026-01-26 12:14:33] 2026-01-26 17:14:01,685 | INFO     | . Timing measurements:
[2026-01-26 12:14:33] 2026-01-26 17:14:01,685 | INFO     | . get job = 0 s
[2026-01-26 12:14:33] 2026-01-26 17:14:01,685 | INFO     | . initial setup = 2 s
[2026-01-26 12:14:33] 2026-01-26 17:14:01,685 | INFO     | . payload setup = 5 s
[2026-01-26 12:14:33] 2026-01-26 17:14:01,685 | INFO     | . stage-in = 0 s
[2026-01-26 12:14:33] 2026-01-26 17:14:01,686 | INFO     | . payload execution = 13363 s
[2026-01-26 12:14:33] 2026-01-26 17:14:01,686 | INFO     | . stage-out = 2 s
[2026-01-26 12:14:33] 2026-01-26 17:14:01,686 | INFO     | . log creation = 0 s
[2026-01-26 12:14:33] 2026-01-26 17:14:01,686 | INFO     | ..............................
[2026-01-26 12:14:33] 2026-01-26 17:14:01,839 | INFO     | 
[2026-01-26 12:14:33] 2026-01-26 17:14:01,839 | INFO     | job summary report
[2026-01-26 12:14:33] 2026-01-26 17:14:01,839 | INFO     | --------------------------------------------------
[2026-01-26 12:14:33] 2026-01-26 17:14:01,839 | INFO     | PanDA job id: 6983607946
[2026-01-26 12:14:33] 2026-01-26 17:14:01,840 | INFO     | task id: 48330021
[2026-01-26 12:14:33] 2026-01-26 17:14:01,840 | INFO     | errors: (none)
[2026-01-26 12:14:33] 2026-01-26 17:14:01,840 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 12:14:33] 2026-01-26 17:14:01,840 | INFO     | pilot state: finished 
[2026-01-26 12:14:33] 2026-01-26 17:14:01,840 | INFO     | transexitcode: 0
[2026-01-26 12:14:33] 2026-01-26 17:14:01,840 | INFO     | exeerrorcode: 0
[2026-01-26 12:14:33] 2026-01-26 17:14:01,841 | INFO     | exeerrordiag: 
[2026-01-26 12:14:33] 2026-01-26 17:14:01,841 | INFO     | exitcode: 0
[2026-01-26 12:14:33] 2026-01-26 17:14:01,841 | INFO     | exitmsg: OK
[2026-01-26 12:14:33] 2026-01-26 17:14:01,841 | INFO     | cpuconsumptiontime: 103028 s
[2026-01-26 12:14:33] 2026-01-26 17:14:01,841 | INFO     | nevents: 400
[2026-01-26 12:14:33] 2026-01-26 17:14:01,841 | INFO     | neventsw: 0
[2026-01-26 12:14:33] 2026-01-26 17:14:01,842 | INFO     | pid: 30157
[2026-01-26 12:14:33] 2026-01-26 17:14:01,842 | INFO     | pgrp: 30157
[2026-01-26 12:14:33] 2026-01-26 17:14:01,842 | INFO     | corecount: 8
[2026-01-26 12:14:33] 2026-01-26 17:14:01,842 | INFO     | event service: False
[2026-01-26 12:14:33] 2026-01-26 17:14:01,842 | INFO     | sizes: {0: 2284384, 11: 2284384, 13372: 2314667, 13373: 2314666, 13375: 2323720, 13377: 2324098}
[2026-01-26 12:14:33] 2026-01-26 17:14:01,842 | INFO     | --------------------------------------------------
[2026-01-26 12:14:33] 2026-01-26 17:14:01,843 | INFO     | 
[2026-01-26 12:14:33] 2026-01-26 17:14:01,843 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-26 12:14:33] 2026-01-26 17:14:01,864 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 12:14:33] 2026-01-26 17:14:01,864 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 12:14:33] 2026-01-26 17:14:01,865 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 12:14:33] 2026-01-26 17:14:01,865 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 12:14:33] 2026-01-26 17:14:01,865 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 12:14:33] 2026-01-26 17:14:01,865 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 12:14:33] 2026-01-26 17:14:01,865 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 12:14:33] 2026-01-26 17:14:01,865 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 12:14:33] 2026-01-26 17:14:01,865 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 12:14:33] 2026-01-26 17:14:01,865 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 12:14:33] 2026-01-26 17:14:01,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 12:14:33] 2026-01-26 17:14:01,866 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 12:14:33] 2026-01-26 17:14:01,866 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 12:14:33] 2026-01-26 17:14:01,866 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 12:14:33] 2026-01-26 17:14:01,866 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 12:14:33] 2026-01-26 17:14:01,866 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 12:14:33] 2026-01-26 17:14:01,866 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 12:14:33] 2026-01-26 17:14:01,866 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 12:14:33] 2026-01-26 17:14:01,867 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 12:14:33] 2026-01-26 17:14:01,867 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 12:14:33] 2026-01-26 17:14:01,867 | INFO     | job 6983607946 has completed (purged errors)
[2026-01-26 12:14:33] 2026-01-26 17:14:01,867 | INFO     | overall cleanup function is called
[2026-01-26 12:14:33] 2026-01-26 17:14:02,875 | INFO     | --- collectZombieJob: --- 10, [30157]
[2026-01-26 12:14:33] 2026-01-26 17:14:02,887 | INFO     | zombie collector waiting for pid 30157
[2026-01-26 12:14:33] 2026-01-26 17:14:02,888 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 12:14:33] 2026-01-26 17:14:02,888 | INFO     | collected zombie processes
[2026-01-26 12:14:33] 2026-01-26 17:14:02,888 | INFO     | will attempt to kill all subprocesses of pid=30157
[2026-01-26 12:14:33] 2026-01-26 17:14:03,040 | INFO     | process IDs to be killed: [30157] (in reverse order)
[2026-01-26 12:14:33] 2026-01-26 17:14:03,097 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 12:14:33] 2026-01-26 17:14:03,097 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 12:14:33] 2026-01-26 17:14:03,103 | INFO     | did not find any defunct processes belonging to 30157
[2026-01-26 12:14:33] 2026-01-26 17:14:03,108 | INFO     | did not find any defunct processes belonging to 30157
[2026-01-26 12:14:33] 2026-01-26 17:14:03,108 | INFO     | ready for new job
[2026-01-26 12:14:33] 2026-01-26 17:14:03,108 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 12:14:33] 2026-01-26 17:14:03,111 | INFO     | **************************************
[2026-01-26 12:14:33] 2026-01-26 17:14:03,111 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 12:14:33] 2026-01-26 17:14:03,111 | INFO     | **************************************
[2026-01-26 12:14:33] 2026-01-26 17:14:03,111 | INFO     | 
[2026-01-26 12:14:33] 2026-01-26 17:14:03,112 | INFO     | architecture information:
[2026-01-26 12:14:33] 2026-01-26 17:14:03,113 | INFO     | executing command: cat /etc/os-release
[2026-01-26 12:14:33] 2026-01-26 17:14:03,127 | INFO     | cat /etc/os-release:
[2026-01-26 12:14:33] NAME="CentOS Linux"
[2026-01-26 12:14:33] VERSION="7 (Core)"
[2026-01-26 12:14:33] ID="centos"
[2026-01-26 12:14:33] ID_LIKE="rhel fedora"
[2026-01-26 12:14:33] VERSION_ID="7"
[2026-01-26 12:14:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 12:14:33] ANSI_COLOR="0;31"
[2026-01-26 12:14:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 12:14:33] HOME_URL="https://www.centos.org/"
[2026-01-26 12:14:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 12:14:33] 
[2026-01-26 12:14:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 12:14:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 12:14:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 12:14:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 12:14:33] 
[2026-01-26 12:14:33] 2026-01-26 17:14:03,128 | INFO     | **************************************
[2026-01-26 12:14:33] 2026-01-26 17:14:03,630 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-26 12:14:33] 2026-01-26 17:14:03,683 | INFO     | sufficient remaining disk space (27625783296 B)
[2026-01-26 12:14:33] 2026-01-26 17:14:03,683 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 12:14:33] 2026-01-26 17:14:03,684 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 12:14:33] 2026-01-26 17:14:03,684 | INFO     | update_server=False
[2026-01-26 12:14:33] 2026-01-26 17:14:03,684 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 12:14:33] 2026-01-26 17:14:03,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 12:14:33] 2026-01-26 17:14:03,685 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 12:14:33] 2026-01-26 17:14:03,685 | INFO     | aborting loop
[2026-01-26 12:14:33] 2026-01-26 17:14:03,685 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 12:14:33] 2026-01-26 17:14:03,685 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 12:14:33] 2026-01-26 17:14:04,068 | INFO     | all payload control threads have been joined
[2026-01-26 12:14:33] 2026-01-26 17:14:04,606 | INFO     | all data control threads have been joined
[2026-01-26 12:14:33] 2026-01-26 17:14:04,686 | INFO     | [job] retrieve thread has finished
[2026-01-26 12:14:33] 2026-01-26 17:14:04,687 | INFO     | [job] job monitor thread has finished
[2026-01-26 12:14:33] 2026-01-26 17:14:04,691 | INFO     | [job] queue monitor thread has finished
[2026-01-26 12:14:33] 2026-01-26 17:14:04,762 | INFO     | all job control threads have been joined
[2026-01-26 12:14:33] 2026-01-26 17:14:05,073 | INFO     | [payload] control thread has finished
[2026-01-26 12:14:33] 2026-01-26 17:14:05,171 | INFO     | [payload] validate_post thread has finished
[2026-01-26 12:14:33] 2026-01-26 17:14:05,523 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 12:14:33] 2026-01-26 17:14:05,524 | INFO     | [data] copytool_in thread has finished
[2026-01-26 12:14:33] 2026-01-26 17:14:05,592 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 12:14:33] 2026-01-26 17:14:05,611 | INFO     | [data] control thread has finished
[2026-01-26 12:14:33] 2026-01-26 17:14:05,681 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 12:14:33] 2026-01-26 17:14:05,687 | INFO     | [data] copytool_out thread has finished
[2026-01-26 12:14:33] 2026-01-26 17:14:05,746 | INFO     | [job] validate thread has finished
[2026-01-26 12:14:33] 2026-01-26 17:14:05,767 | INFO     | [job] control thread has finished
[2026-01-26 12:14:33] 2026-01-26 17:14:05,887 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 12:14:33] 2026-01-26 17:14:06,153 | INFO     | [payload] failed_post thread has finished
[2026-01-26 12:14:33] 2026-01-26 17:14:07,697 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 12:14:33] 2026-01-26 17:14:14,452 | INFO     | [monitor] cgroup control has ended
[2026-01-26 12:14:33] 2026-01-26 17:14:15,721 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139956654909248)>', '<ExcThread(monitor, started 139956139849472)>']
[2026-01-26 12:14:33] 2026-01-26 17:14:20,746 | INFO     | all workflow threads have been joined
[2026-01-26 12:14:33] 2026-01-26 17:14:20,746 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 12:14:33] 2026-01-26 17:14:20,747 | INFO     | traces error code: 0
[2026-01-26 12:14:33] 2026-01-26 17:14:20,747 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 12:14:33] 2026-01-26 17:14:33,436 | INFO     | PID=22248 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 12:14:33] 2026-01-26 17:14:33,436 | INFO     | .. there are 3 such processes running
[2026-01-26 12:14:33] 2026-01-26 17:14:33,436 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 12:14:33] 2026-01-26 17:14:33,437 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 12:14:33] 2026-01-26 17:14:33,437 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 12:14:33] 2026-01-26 17:14:33,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 12:14:33] 2026-01-26 17:14:33,437 | CRITICAL | thread 'MainThread' is not alive
[2026-01-26 12:14:33] 2026-01-26 17:14:33,437 | INFO     | [monitor] control thread has ended
[2026-01-26 12:14:33] 2026-01-26 17:14:33,547 [wrapper] ==== pilot stdout END ====
[2026-01-26 12:14:33] 2026-01-26 17:14:33,549 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 12:14:33] 2026-01-26 17:14:33,551 [wrapper] pilotpid: 22248
[2026-01-26 12:14:33] 2026-01-26 17:14:33,553 [wrapper] Pilot exit status: 0
[2026-01-26 12:14:33] 2026-01-26 17:14:33,561 [wrapper] pandaids: 6983607946 6983607946
[2026-01-26 12:14:33] 2026-01-26 17:14:33,593 [wrapper] cleanup supervisor_pilot 20817 22250
[2026-01-26 12:14:33] 2026-01-26 17:14:33,595 [wrapper] Test setup, not cleaning
[2026-01-26 12:14:33] 2026-01-26 17:14:33,597 [wrapper] apfmon messages muted
[2026-01-26 12:14:33] 2026-01-26 17:14:33,600 [wrapper] ==== wrapper stdout END ====
[2026-01-26 12:14:33] 2026-01-26 17:14:33,602 [wrapper] ==== wrapper stderr END ====
[2026-01-26 12:14:33]  *** Error codes and diagnostics ***
[2026-01-26 12:14:33]     "exeErrorCode": 0,
[2026-01-26 12:14:33]     "exeErrorDiag": "",
[2026-01-26 12:14:33]     "pilotErrorCode": 0,
[2026-01-26 12:14:33]     "pilotErrorDiag": "",
[2026-01-26 12:14:33]  *** Listing of results directory ***
[2026-01-26 12:14:33] total 664756
[2026-01-26 12:14:33] drwx------ 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-01-26 12:14:33] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 20:12 pilot3.tar.gz
[2026-01-26 12:14:33] -rwx------ 1 boincer umatlas     36322 Jan 25 20:12 runpilot2-wrapper.sh
[2026-01-26 12:14:33] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 20:14 queuedata.json
[2026-01-26 12:14:33] -rw-r--r-- 1 boincer umatlas       100 Jan 26 05:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 12:14:33] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 05:25 run_atlas
[2026-01-26 12:14:33] -rw-r--r-- 1 boincer umatlas       105 Jan 26 05:25 job.xml
[2026-01-26 12:14:33] -rw-r--r-- 3 boincer umatlas 249987979 Jan 26 05:25 EVNT.48330019._000015.pool.root.1
[2026-01-26 12:14:33] -rw-r--r-- 3 boincer umatlas 249987979 Jan 26 05:25 ATLAS.root_0
[2026-01-26 12:14:33] drwxrwx--x 2 boincer umatlas      4096 Jan 26 05:25 shared
[2026-01-26 12:14:33] -rw-r--r-- 2 boincer umatlas    597784 Jan 26 05:25 input.tar.gz
[2026-01-26 12:14:33] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 05:25 start_atlas.sh
[2026-01-26 12:14:33] -rw-r--r-- 1 boincer umatlas         0 Jan 26 05:25 boinc_lockfile
[2026-01-26 12:14:33] -rw-r--r-- 1 boincer umatlas      2630 Jan 26 08:30 pandaJob.out
[2026-01-26 12:14:33] -rw------- 1 boincer umatlas        57 Jan 26 08:30 setup.sh.local
[2026-01-26 12:14:33] -rw------- 1 boincer umatlas   1002197 Jan 26 08:30 agis_schedconf.cvmfs.json
[2026-01-26 12:14:33] -rw------- 1 boincer umatlas       445 Jan 26 08:30 workernode_map.json
[2026-01-26 12:14:33] -rw-r--r-- 1 boincer umatlas      5953 Jan 26 12:11 init_data.xml
[2026-01-26 12:14:33] -rw------- 1 boincer umatlas 172157755 Jan 26 12:13 HITS.48330021._000352.pool.root.1
[2026-01-26 12:14:33] -rw-r--r-- 1 boincer umatlas       532 Jan 26 12:13 boinc_task_state.xml
[2026-01-26 12:14:33] -rw------- 1 boincer umatlas        96 Jan 26 12:13 pilot_heartbeat.json
[2026-01-26 12:14:33] -rw------- 1 boincer umatlas      1053 Jan 26 12:13 memory_monitor_summary.json
[2026-01-26 12:14:33] -rw------- 1 boincer umatlas   1516246 Jan 26 12:13 agis_ddmendpoints.agis.ALL.json
[2026-01-26 12:14:33] -rw------- 1 boincer umatlas    438715 Jan 26 12:14 log.48330021._000352.job.log.tgz.1
[2026-01-26 12:14:33] -rw-r--r-- 1 boincer umatlas        29 Jan 26 12:14 wrapper_checkpoint.txt
[2026-01-26 12:14:33] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 12:14 boinc_mmap_file
[2026-01-26 12:14:33] -rw------- 1 boincer umatlas      6421 Jan 26 12:14 heartbeat.json
[2026-01-26 12:14:33] -rw------- 1 boincer umatlas       890 Jan 26 12:14 pilotlog.txt
[2026-01-26 12:14:33] -rw------- 1 boincer umatlas   1875390 Jan 26 12:14 log.48330021._000352.job.log.1
[2026-01-26 12:14:33] -rw------- 1 boincer umatlas       357 Jan 26 12:14 output.list
[2026-01-26 12:14:33] -rw-r--r-- 1 boincer umatlas       620 Jan 26 12:14 runtime_log
[2026-01-26 12:14:33] -rw------- 1 boincer umatlas   2334720 Jan 26 12:14 result.tar.gz
[2026-01-26 12:14:33] -rw-r--r-- 1 boincer umatlas      9427 Jan 26 12:14 runtime_log.err
[2026-01-26 12:14:33] -rw------- 1 boincer umatlas       788 Jan 26 12:14 3NAODmBLQ48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQF2KDmBpvxqn.diag
[2026-01-26 12:14:33] -rw-r--r-- 1 boincer umatlas     23144 Jan 26 12:14 stderr.txt
[2026-01-26 12:14:33] HITS file was successfully produced:
[2026-01-26 12:14:33] -rw------- 1 boincer umatlas 172157755 Jan 26 12:13 shared/HITS.pool.root.1
[2026-01-26 12:14:33]  *** Contents of shared directory: ***
[2026-01-26 12:14:33] total 415144
[2026-01-26 12:14:33] -rw-r--r-- 3 boincer umatlas 249987979 Jan 26 05:25 ATLAS.root_0
[2026-01-26 12:14:33] -rw-r--r-- 2 boincer umatlas    597784 Jan 26 05:25 input.tar.gz
[2026-01-26 12:14:33] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 05:25 start_atlas.sh
[2026-01-26 12:14:33] -rw------- 1 boincer umatlas 172157755 Jan 26 12:13 HITS.pool.root.1
[2026-01-26 12:14:33] -rw------- 1 boincer umatlas   2334720 Jan 26 12:14 result.tar.gz
12:14:35 (10827): run_atlas exited; CPU time 103215.536561
12:14:35 (10827): called boinc_finish(0)

</stderr_txt>
]]>

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