Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:09:42 (818612): wrapper (7.7.26015): starting
20:09:42 (818612): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 20:09:42] Arguments: --nthreads 4
[2026-01-27 20:09:42] Threads: 4
[2026-01-27 20:09:42] Checking for CVMFS
[2026-01-27 20:09:42] No cvmfs_config command found, will try listing directly
[2026-01-27 20:09:42] CVMFS is ok
[2026-01-27 20:09:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 20:09:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 20:09:42] Further information can be found at the LHC@home message board.
[2026-01-27 20:09:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 20:09:42] Checking for apptainer binary...
[2026-01-27 20:09:42] which: no apptainer in ((null))
[2026-01-27 20:09:42] apptainer is not installed, using version from CVMFS
[2026-01-27 20:09:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 20:09:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-01-27 20:09:42] apptainer works
[2026-01-27 20:09:42] Set ATHENA_PROC_NUMBER=4
[2026-01-27 20:09:42] Set ATHENA_CORE_NUMBER=4
[2026-01-27 20:09:42] Starting ATLAS job with PandaID=6984060934
[2026-01-27 20:09:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 23:04:50]  *** The last 200 lines of the pilot log: ***
[2026-01-27 23:04:50] 2026-01-27 22:00:42,778 | INFO     | mean x: 1769546118.5
[2026-01-27 23:04:50] 2026-01-27 22:00:42,779 | INFO     | mean y: 2328639.7916666665
[2026-01-27 23:04:50] 2026-01-27 22:00:42,779 | INFO     | intersect: 5422508063.953594
[2026-01-27 23:04:50] 2026-01-27 22:00:42,779 | INFO     | chi2: 2.000529118166259
[2026-01-27 23:04:50] 2026-01-27 22:00:42,779 | INFO     | sum of square deviations: 1342841922.0
[2026-01-27 23:04:50] 2026-01-27 22:00:42,780 | INFO     | sum of deviations: 5983984954.000001
[2026-01-27 23:04:50] 2026-01-27 22:00:42,781 | INFO     | mean x: 1769545966.0
[2026-01-27 23:04:50] 2026-01-27 22:00:42,781 | INFO     | mean y: 2340894.527607362
[2026-01-27 23:04:50] 2026-01-27 22:00:42,781 | INFO     | intersect: -7883126681.718794
[2026-01-27 23:04:50] 2026-01-27 22:00:42,781 | INFO     | chi2: 1.2318288590775759
[2026-01-27 23:04:50] 2026-01-27 22:00:42,781 | INFO     | current chi2=1.2318288590775759 (change=38.42484731205988 %)
[2026-01-27 23:04:50] 2026-01-27 22:00:42,782 | INFO     | sum of square deviations: 1223016419.5
[2026-01-27 23:04:50] 2026-01-27 22:00:42,782 | INFO     | sum of deviations: 5946684765.499999
[2026-01-27 23:04:50] 2026-01-27 22:00:42,783 | INFO     | mean x: 1769545813.5
[2026-01-27 23:04:50] 2026-01-27 22:00:42,783 | INFO     | mean y: 2340847.006329114
[2026-01-27 23:04:50] 2026-01-27 22:00:42,783 | INFO     | intersect: -8601739166.323984
[2026-01-27 23:04:50] 2026-01-27 22:00:42,783 | INFO     | chi2: 1.2327372833855763
[2026-01-27 23:04:50] 2026-01-27 22:00:42,783 | INFO     | current chi2=1.2327372833855763 (change=-0.07374598356793431 %)
[2026-01-27 23:04:50] 2026-01-27 22:00:42,783 | INFO     | right removable region: 157
[2026-01-27 23:04:50] 2026-01-27 22:00:42,784 | INFO     | sum of square deviations: 1342841922.0
[2026-01-27 23:04:50] 2026-01-27 22:00:42,785 | INFO     | sum of deviations: -20519145535.0
[2026-01-27 23:04:50] 2026-01-27 22:00:42,785 | INFO     | mean x: 1769546271.0
[2026-01-27 23:04:50] 2026-01-27 22:00:42,785 | INFO     | mean y: 2347371.073619632
[2026-01-27 23:04:50] 2026-01-27 22:00:42,785 | INFO     | intersect: 27041700902.341724
[2026-01-27 23:04:50] 2026-01-27 22:00:42,785 | INFO     | chi2: 0.8179183791986389
[2026-01-27 23:04:50] 2026-01-27 22:00:42,785 | INFO     | current chi2=0.8179183791986389 (change=59.11489756528183 %)
[2026-01-27 23:04:50] 2026-01-27 22:00:42,786 | INFO     | sum of square deviations: 1223016419.5
[2026-01-27 23:04:50] 2026-01-27 22:00:42,786 | INFO     | sum of deviations: -21177517071.0
[2026-01-27 23:04:50] 2026-01-27 22:00:42,787 | INFO     | mean x: 1769546423.5
[2026-01-27 23:04:50] 2026-01-27 22:00:42,787 | INFO     | mean y: 2348168.0379746836
[2026-01-27 23:04:50] 2026-01-27 22:00:42,787 | INFO     | intersect: 30643473662.427338
[2026-01-27 23:04:50] 2026-01-27 22:00:42,787 | INFO     | chi2: 0.8055687986697082
[2026-01-27 23:04:50] 2026-01-27 22:00:42,787 | INFO     | current chi2=0.8055687986697082 (change=1.509879328183117 %)
[2026-01-27 23:04:50] 2026-01-27 22:00:42,787 | INFO     | left removable region: 20
[2026-01-27 23:04:50] 2026-01-27 22:00:42,788 | INFO     | sum of square deviations: 797291228.0
[2026-01-27 23:04:50] 2026-01-27 22:00:42,788 | INFO     | sum of deviations: -8322451796.0
[2026-01-27 23:04:50] 2026-01-27 22:00:42,789 | INFO     | mean x: 1769546393.0
[2026-01-27 23:04:50] 2026-01-27 22:00:42,789 | INFO     | mean y: 2359430.9343065694
[2026-01-27 23:04:50] 2026-01-27 22:00:42,789 | INFO     | intersect: 18473608128.189724
[2026-01-27 23:04:50] 2026-01-27 22:00:42,789 | INFO     | chi2: 0.012957513442382093
[2026-01-27 23:04:50] 2026-01-27 22:00:42,789 | INFO     | current memory leak: -10.44 B/s (using 137 data points, chi2=0.01)
[2026-01-27 23:04:50] 2026-01-27 22:00:42,790 | INFO     | could have reported an average CPU frequency of 2762 MHz (9 samples)
[2026-01-27 23:04:50] 2026-01-27 22:00:42,790 | INFO     | ..............................
[2026-01-27 23:04:50] 2026-01-27 22:00:42,790 | INFO     | . Timing measurements:
[2026-01-27 23:04:50] 2026-01-27 22:00:42,790 | INFO     | . get job = 0 s
[2026-01-27 23:04:50] 2026-01-27 22:00:42,790 | INFO     | . initial setup = 6 s
[2026-01-27 23:04:50] 2026-01-27 22:00:42,790 | INFO     | . payload setup = 6 s
[2026-01-27 23:04:50] 2026-01-27 22:00:42,790 | INFO     | . stage-in = 0 s
[2026-01-27 23:04:50] 2026-01-27 22:00:42,790 | INFO     | . payload execution = 10216 s
[2026-01-27 23:04:50] 2026-01-27 22:00:42,791 | INFO     | . stage-out = 0 s
[2026-01-27 23:04:50] 2026-01-27 22:00:42,791 | INFO     | . log creation = 0 s
[2026-01-27 23:04:50] 2026-01-27 22:00:42,791 | INFO     | ..............................
[2026-01-27 23:04:50] 2026-01-27 22:00:42,903 | INFO     | 
[2026-01-27 23:04:50] 2026-01-27 22:00:42,903 | INFO     | job summary report
[2026-01-27 23:04:50] 2026-01-27 22:00:42,904 | INFO     | --------------------------------------------------
[2026-01-27 23:04:50] 2026-01-27 22:00:42,904 | INFO     | PanDA job id: 6984060934
[2026-01-27 23:04:50] 2026-01-27 22:00:42,904 | INFO     | task id: 48317872
[2026-01-27 23:04:50] 2026-01-27 22:00:42,904 | INFO     | errors: (none)
[2026-01-27 23:04:50] 2026-01-27 22:00:42,904 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 23:04:50] 2026-01-27 22:00:42,904 | INFO     | pilot state: finished 
[2026-01-27 23:04:50] 2026-01-27 22:00:42,904 | INFO     | transexitcode: 0
[2026-01-27 23:04:50] 2026-01-27 22:00:42,904 | INFO     | exeerrorcode: 0
[2026-01-27 23:04:50] 2026-01-27 22:00:42,904 | INFO     | exeerrordiag: 
[2026-01-27 23:04:50] 2026-01-27 22:00:42,904 | INFO     | exitcode: 0
[2026-01-27 23:04:50] 2026-01-27 22:00:42,904 | INFO     | exitmsg: OK
[2026-01-27 23:04:50] 2026-01-27 22:00:42,904 | INFO     | cpuconsumptiontime: 39033 s
[2026-01-27 23:04:50] 2026-01-27 22:00:42,904 | INFO     | nevents: 400
[2026-01-27 23:04:50] 2026-01-27 22:00:42,904 | INFO     | neventsw: 0
[2026-01-27 23:04:50] 2026-01-27 22:00:42,905 | INFO     | pid: 827825
[2026-01-27 23:04:50] 2026-01-27 22:00:42,905 | INFO     | pgrp: 827825
[2026-01-27 23:04:50] 2026-01-27 22:00:42,905 | INFO     | corecount: 4
[2026-01-27 23:04:50] 2026-01-27 22:00:42,905 | INFO     | event service: False
[2026-01-27 23:04:50] 2026-01-27 22:00:42,905 | INFO     | sizes: {0: 2284243, 11: 2284243, 10226: 2312784, 10228: 2321860, 10230: 2322062}
[2026-01-27 23:04:50] 2026-01-27 22:00:42,905 | INFO     | --------------------------------------------------
[2026-01-27 23:04:50] 2026-01-27 22:00:42,905 | INFO     | 
[2026-01-27 23:04:50] 2026-01-27 22:00:42,905 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2026-01-27 23:04:50] 2026-01-27 22:00:42,926 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 23:04:50] 2026-01-27 22:00:42,927 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 23:04:50] 2026-01-27 22:00:42,927 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 23:04:50] 2026-01-27 22:00:42,927 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 23:04:50] 2026-01-27 22:00:42,927 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 23:04:50] 2026-01-27 22:00:42,927 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 23:04:50] 2026-01-27 22:00:42,927 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 23:04:50] 2026-01-27 22:00:42,928 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 23:04:50] 2026-01-27 22:00:42,928 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 23:04:50] 2026-01-27 22:00:42,928 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 23:04:50] 2026-01-27 22:00:42,928 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 23:04:50] 2026-01-27 22:00:42,928 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 23:04:50] 2026-01-27 22:00:42,928 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 23:04:50] 2026-01-27 22:00:42,928 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 23:04:50] 2026-01-27 22:00:42,928 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 23:04:50] 2026-01-27 22:00:42,928 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 23:04:50] 2026-01-27 22:00:42,928 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 23:04:50] 2026-01-27 22:00:42,928 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 23:04:50] 2026-01-27 22:00:42,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 23:04:50] 2026-01-27 22:00:42,929 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 23:04:50] 2026-01-27 22:00:42,929 | INFO     | job 6984060934 has completed (purged errors)
[2026-01-27 23:04:50] 2026-01-27 22:00:42,929 | INFO     | overall cleanup function is called
[2026-01-27 23:04:50] 2026-01-27 22:00:43,937 | INFO     | --- collectZombieJob: --- 10, [827825]
[2026-01-27 23:04:50] 2026-01-27 22:00:43,938 | INFO     | zombie collector waiting for pid 827825
[2026-01-27 23:04:50] 2026-01-27 22:00:43,938 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 23:04:50] 2026-01-27 22:00:43,938 | INFO     | collected zombie processes
[2026-01-27 23:04:50] 2026-01-27 22:00:43,938 | INFO     | will attempt to kill all subprocesses of pid=827825
[2026-01-27 23:04:50] 2026-01-27 22:00:44,611 | INFO     | process IDs to be killed: [827825] (in reverse order)
[2026-01-27 23:04:50] 2026-01-27 22:00:44,726 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 23:04:50] 2026-01-27 22:00:44,726 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 23:04:50] 2026-01-27 22:00:44,760 | INFO     | did not find any defunct processes belonging to 827825
[2026-01-27 23:04:50] 2026-01-27 22:00:44,796 | INFO     | did not find any defunct processes belonging to 827825
[2026-01-27 23:04:50] 2026-01-27 22:00:44,797 | INFO     | ready for new job
[2026-01-27 23:04:50] 2026-01-27 22:00:44,797 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 23:04:50] 2026-01-27 22:00:44,799 | INFO     | **************************************
[2026-01-27 23:04:50] 2026-01-27 22:00:44,799 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 23:04:50] 2026-01-27 22:00:44,800 | INFO     | **************************************
[2026-01-27 23:04:50] 2026-01-27 22:00:44,800 | INFO     | 
[2026-01-27 23:04:50] 2026-01-27 22:00:44,804 | INFO     | architecture information:
[2026-01-27 23:04:50] 2026-01-27 22:00:44,805 | INFO     | executing command: cat /etc/os-release
[2026-01-27 23:04:50] 2026-01-27 22:00:44,821 | INFO     | cat /etc/os-release:
[2026-01-27 23:04:50] NAME="CentOS Linux"
[2026-01-27 23:04:50] VERSION="7 (Core)"
[2026-01-27 23:04:50] ID="centos"
[2026-01-27 23:04:50] ID_LIKE="rhel fedora"
[2026-01-27 23:04:50] VERSION_ID="7"
[2026-01-27 23:04:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 23:04:50] ANSI_COLOR="0;31"
[2026-01-27 23:04:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 23:04:50] HOME_URL="https://www.centos.org/"
[2026-01-27 23:04:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 23:04:50] 
[2026-01-27 23:04:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 23:04:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 23:04:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 23:04:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 23:04:50] 
[2026-01-27 23:04:50] 2026-01-27 22:00:44,821 | INFO     | **************************************
[2026-01-27 23:04:50] 2026-01-27 22:00:44,871 | WARNING  | process 827825 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 23:04:50] 2026-01-27 22:00:45,148 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 23:04:50] 2026-01-27 22:00:45,149 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 23:04:50] 2026-01-27 22:00:45,149 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-27 23:04:50] 2026-01-27 22:00:45,150 | WARNING  | maxPSS not found in memory monitor output
[2026-01-27 23:04:50] 2026-01-27 22:00:45,150 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6984060934/payload.stdout) since it has not been created yet
[2026-01-27 23:04:50] 2026-01-27 22:00:45,150 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2026-01-27 23:04:50] 2026-01-27 22:00:45,168 | INFO     | sufficient remaining disk space (659604635648 B)
[2026-01-27 23:04:50] 2026-01-27 22:00:45,168 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-27 23:04:50] 2026-01-27 22:00:45,168 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6984060934/HITS.48317872._002500.pool.root.1 since it does not exist
[2026-01-27 23:04:50] 2026-01-27 22:00:45,324 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2026-01-27 23:04:50] 2026-01-27 22:00:45,342 | INFO     | sufficient remaining disk space (659604635648 B)
[2026-01-27 23:04:50] 2026-01-27 22:00:45,343 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 23:04:50] 2026-01-27 22:00:45,343 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 23:04:50] 2026-01-27 22:00:45,343 | INFO     | update_server=False
[2026-01-27 23:04:50] 2026-01-27 22:00:45,343 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 23:04:50] 2026-01-27 22:00:45,438 | INFO     | all payload control threads have been joined
[2026-01-27 23:04:50] 2026-01-27 22:00:45,530 | INFO     | number of running child processes to parent process 827825: 1
[2026-01-27 23:04:50] 2026-01-27 22:00:45,530 | INFO     | maximum number of monitored processes: 6
[2026-01-27 23:04:50] 2026-01-27 22:00:45,531 | INFO     | aborting job monitoring since job object (job id=6984060934) has expired
[2026-01-27 23:04:50] 2026-01-27 22:00:45,531 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 23:04:50] 2026-01-27 22:00:45,531 | INFO     | will abort loop
[2026-01-27 23:04:50] 2026-01-27 22:00:46,087 | INFO     | all data control threads have been joined
[2026-01-27 23:04:50] 2026-01-27 22:00:46,348 | INFO     | [job] retrieve thread has finished
[2026-01-27 23:04:50] 2026-01-27 22:00:46,445 | INFO     | [payload] control thread has finished
[2026-01-27 23:04:50] 2026-01-27 22:00:46,453 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 23:04:50] 2026-01-27 22:00:46,500 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 23:04:50] 2026-01-27 22:00:46,501 | INFO     | [job] validate thread has finished
[2026-01-27 23:04:50] 2026-01-27 22:00:46,536 | INFO     | [job] job monitor thread has finished
[2026-01-27 23:04:50] 2026-01-27 22:00:46,686 | INFO     | [payload] validate_post thread has finished
[2026-01-27 23:04:50] 2026-01-27 22:00:46,897 | INFO     | all job control threads have been joined
[2026-01-27 23:04:50] 2026-01-27 22:00:46,898 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 23:04:50] 2026-01-27 22:00:47,059 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 23:04:50] 2026-01-27 22:00:47,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 23:04:50] 2026-01-27 22:00:47,089 | INFO     | [data] control thread has finished
[2026-01-27 23:04:50] 2026-01-27 22:00:47,413 | INFO     | [data] copytool_in thread has finished
[2026-01-27 23:04:50] 2026-01-27 22:00:47,662 | INFO     | [payload] failed_post thread has finished
[2026-01-27 23:04:50] 2026-01-27 22:00:47,756 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 23:04:50] 2026-01-27 22:00:47,902 | INFO     | [job] control thread has finished
[2026-01-27 23:04:50] 2026-01-27 22:00:47,913 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 23:04:50] 2026-01-27 22:00:48,458 | INFO     | [data] copytool_out thread has finished
[2026-01-27 23:04:50] 2026-01-27 22:00:48,919 | INFO     | [job] queue monitor thread has finished
[2026-01-27 23:04:50] 2026-01-27 22:00:51,082 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 23:04:50] 2026-01-27 22:01:14,474 | INFO     | PID=822704 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 23:04:50] 2026-01-27 22:01:14,475 | INFO     | .. there are 3 such processes running
[2026-01-27 23:04:50] 2026-01-27 22:01:14,475 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 23:04:50] 2026-01-27 22:01:14,475 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 23:04:50] 2026-01-27 22:01:14,475 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 23:04:50] 2026-01-27 22:01:17,341 | INFO     | [monitor] cgroup control has ended
[2026-01-27 23:04:50] 2026-01-27 22:01:17,368 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22457472214848)>', '<ExcThread(monitor, started 22457163421440)>']
[2026-01-27 23:04:50] 2026-01-27 22:01:17,489 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 23:04:50] 2026-01-27 22:01:17,490 | INFO     | [monitor] control thread has ended
[2026-01-27 23:04:50] 2026-01-27 22:01:22,393 | INFO     | all workflow threads have been joined
[2026-01-27 23:04:50] 2026-01-27 22:01:22,394 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 23:04:50] 2026-01-27 22:01:22,394 | INFO     | traces error code: 0
[2026-01-27 23:04:50] 2026-01-27 22:01:22,394 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 23:04:50] 2026-01-27 22:01:22,596 [wrapper] ==== pilot stdout END ====
[2026-01-27 23:04:50] 2026-01-27 22:01:22,599 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 23:04:50] 2026-01-27 22:01:22,602 [wrapper] pilotpid: 822704
[2026-01-27 23:04:50] 2026-01-27 22:01:22,605 [wrapper] Pilot exit status: 0
[2026-01-27 23:04:50] 2026-01-27 22:01:22,616 [wrapper] pandaids: 6984060934
[2026-01-27 23:04:50] 2026-01-27 22:01:22,694 [wrapper] cleanup supervisor_pilot  927345 822705
[2026-01-27 23:04:50] 2026-01-27 22:01:22,698 [wrapper] Test setup, not cleaning
[2026-01-27 23:04:50] 2026-01-27 22:01:22,701 [wrapper] apfmon messages muted
[2026-01-27 23:04:50] 2026-01-27 22:01:22,704 [wrapper] ==== wrapper stdout END ====
[2026-01-27 23:04:50] 2026-01-27 22:01:22,707 [wrapper] ==== wrapper stderr END ====
[2026-01-27 23:04:50]  *** Error codes and diagnostics ***
[2026-01-27 23:04:50]     "exeErrorCode": 0,
[2026-01-27 23:04:50]     "exeErrorDiag": "",
[2026-01-27 23:04:50]     "pilotErrorCode": 0,
[2026-01-27 23:04:50]     "pilotErrorDiag": "",
[2026-01-27 23:04:50]  *** Listing of results directory ***
[2026-01-27 23:04:50] total 670456
[2026-01-27 23:04:50] -rwx------ 1 boinc boinc     36322 Jan 26 06:18 runpilot2-wrapper.sh
[2026-01-27 23:04:50] -rw-r--r-- 1 boinc boinc      5111 Jan 26 06:23 queuedata.json
[2026-01-27 23:04:50] -rw-r--r-- 1 boinc boinc    584422 Jan 26 06:23 pilot3.tar.gz
[2026-01-27 23:04:50] -rw-r--r-- 1 boinc boinc       100 Jan 27 20:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 23:04:50] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 20:09 run_atlas
[2026-01-27 23:04:50] -rw-r--r-- 1 boinc boinc       105 Jan 27 20:09 job.xml
[2026-01-27 23:04:50] -rw-r--r-- 1 boinc boinc      6639 Jan 27 20:09 init_data.xml
[2026-01-27 23:04:50] -rw-r--r-- 2 boinc boinc 495523941 Jan 27 20:09 EVNT.48317869._000050.pool.root.1
[2026-01-27 23:04:50] -rw-r--r-- 2 boinc boinc     15845 Jan 27 20:09 start_atlas.sh
[2026-01-27 23:04:50] drwxrwx--x 2 boinc boinc      4096 Jan 27 20:09 shared
[2026-01-27 23:04:50] -rw-r--r-- 2 boinc boinc    597755 Jan 27 20:09 input.tar.gz
[2026-01-27 23:04:50] -rw-r--r-- 1 boinc boinc         0 Jan 27 20:09 boinc_lockfile
[2026-01-27 23:04:50] -rw-r--r-- 1 boinc boinc      2514 Jan 27 20:09 pandaJob.out
[2026-01-27 23:04:50] -rw------- 1 boinc boinc   1005244 Jan 27 20:09 agis_schedconf.cvmfs.json
[2026-01-27 23:04:50] -rw------- 1 boinc boinc   1516246 Jan 27 20:09 agis_ddmendpoints.agis.ALL.json
[2026-01-27 23:04:50] -rw------- 1 boinc boinc       452 Jan 27 20:10 workernode_map.json
[2026-01-27 23:04:50] drwx------ 5 boinc boinc      4096 Jan 27 20:10 pilot3
[2026-01-27 23:04:50] -rw------- 1 boinc boinc 183428425 Jan 27 23:00 HITS.48317872._002500.pool.root.1
[2026-01-27 23:04:50] -rw-r--r-- 1 boinc boinc       529 Jan 27 23:00 boinc_task_state.xml
[2026-01-27 23:04:50] -rw------- 1 boinc boinc      1035 Jan 27 23:00 memory_monitor_summary.json
[2026-01-27 23:04:50] -rw------- 1 boinc boinc    375990 Jan 27 23:00 log.48317872._002500.job.log.tgz.1
[2026-01-27 23:04:50] -rw------- 1 boinc boinc        95 Jan 27 23:00 pilot_heartbeat.json
[2026-01-27 23:04:50] -rw------- 1 boinc boinc      6409 Jan 27 23:00 heartbeat.json
[2026-01-27 23:04:50] -rw------- 1 boinc boinc      6367 Jan 27 23:01 pilotlog.txt
[2026-01-27 23:04:50] -rw------- 1 boinc boinc   1452605 Jan 27 23:01 log.48317872._002500.job.log.1
[2026-01-27 23:04:50] -rw------- 1 boinc boinc       357 Jan 27 23:01 output.list
[2026-01-27 23:04:50] -rw-r--r-- 1 boinc boinc       620 Jan 27 23:01 runtime_log
[2026-01-27 23:04:50] -rw------- 1 boinc boinc   1843200 Jan 27 23:01 result.tar.gz
[2026-01-27 23:04:50] -rw-r--r-- 1 boinc boinc      9205 Jan 27 23:01 runtime_log.err
[2026-01-27 23:04:50] -rw------- 1 boinc boinc       664 Jan 27 23:01 MLOODmsAU48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjj2KDmtyPBdn.diag
[2026-01-27 23:04:50] -rw-r--r-- 1 boinc boinc        26 Jan 27 23:04 wrapper_checkpoint.txt
[2026-01-27 23:04:50] -rw-r--r-- 1 boinc boinc      8192 Jan 27 23:04 boinc_mmap_file
[2026-01-27 23:04:50] -rw-r--r-- 1 boinc boinc     21221 Jan 27 23:04 stderr.txt
[2026-01-27 23:04:50] HITS file was successfully produced:
[2026-01-27 23:04:50] -rw------- 1 boinc boinc 183428425 Jan 27 23:00 shared/HITS.pool.root.1
[2026-01-27 23:04:50]  *** Contents of shared directory: ***
[2026-01-27 23:04:50] total 665452
[2026-01-27 23:04:50] -rw-r--r-- 2 boinc boinc 495523941 Jan 27 20:09 ATLAS.root_0
[2026-01-27 23:04:50] -rw-r--r-- 2 boinc boinc     15845 Jan 27 20:09 start_atlas.sh
[2026-01-27 23:04:50] -rw-r--r-- 2 boinc boinc    597755 Jan 27 20:09 input.tar.gz
[2026-01-27 23:04:50] -rw------- 1 boinc boinc 183428425 Jan 27 23:00 HITS.pool.root.1
[2026-01-27 23:04:50] -rw------- 1 boinc boinc   1843200 Jan 27 23:01 result.tar.gz
23:04:52 (818612): run_atlas exited; CPU time 39514.239476
23:04:52 (818612): called boinc_finish(0)

</stderr_txt>
]]>

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