Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:18:54 (842182): wrapper (7.7.26015): starting
18:18:54 (842182): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 18:18:54] Arguments: --nthreads 12
[2026-01-26 18:18:54] Threads: 12
[2026-01-26 18:18:54] Checking for CVMFS
[2026-01-26 18:18:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 18:18:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 18:18:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 18:18:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 18:18:55] 2.12.7.0 1824229 8727 94032 155555 3 49 2565914 4097024 923 130560 0 6958571 99.990 281676 16042 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-01-26 18:18:55] CVMFS is ok
[2026-01-26 18:18:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 18:18:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 18:18:55] Further information can be found at the LHC@home message board.
[2026-01-26 18:18:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 18:18:55] Checking for apptainer binary...
[2026-01-26 18:18:55] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-01-26 18:18:55] apptainer is not installed, using version from CVMFS
[2026-01-26 18:18:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 18:18:56] pckelar4.cern.ch
[2026-01-26 18:18:56] apptainer works
[2026-01-26 18:18:56] Set ATHENA_PROC_NUMBER=12
[2026-01-26 18:18:56] Set ATHENA_CORE_NUMBER=12
[2026-01-26 18:18:56] Starting ATLAS job with PandaID=6983773576
[2026-01-26 18:18:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 20:08:28]  *** The last 200 lines of the pilot log: ***
[2026-01-26 20:08:28] 2026-01-26 19:07:56,237 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 20:08:28] 2026-01-26 19:07:56,237 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 20:08:28] 2026-01-26 19:07:56,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 20:08:28] 2026-01-26 19:07:56,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 20:08:28] 2026-01-26 19:07:56,241 | INFO     | fitting pss+swap vs Time
[2026-01-26 20:08:28] 2026-01-26 19:07:56,242 | INFO     | sum of square deviations: 379832238.0
[2026-01-26 20:08:28] 2026-01-26 19:07:56,243 | INFO     | sum of deviations: -11655911231.999996
[2026-01-26 20:08:28] 2026-01-26 19:07:56,243 | INFO     | mean x: 1769451199.0
[2026-01-26 20:08:28] 2026-01-26 19:07:56,243 | INFO     | mean y: 2851226.878504673
[2026-01-26 20:08:28] 2026-01-26 19:07:56,243 | INFO     | intersect: 54301997116.91209
[2026-01-26 20:08:28] 2026-01-26 19:07:56,244 | INFO     | chi2: 1.7660200529571373
[2026-01-26 20:08:28] 2026-01-26 19:07:56,244 | INFO     | sum of square deviations: 329031285.5
[2026-01-26 20:08:28] 2026-01-26 19:07:56,245 | INFO     | sum of deviations: -9416220317.5
[2026-01-26 20:08:28] 2026-01-26 19:07:56,245 | INFO     | mean x: 1769451046.5
[2026-01-26 20:08:28] 2026-01-26 19:07:56,245 | INFO     | mean y: 2857954.774509804
[2026-01-26 20:08:28] 2026-01-26 19:07:56,245 | INFO     | intersect: 50641024077.96202
[2026-01-26 20:08:28] 2026-01-26 19:07:56,246 | INFO     | chi2: 1.7690225086656288
[2026-01-26 20:08:28] 2026-01-26 19:07:56,246 | INFO     | current chi2=1.7690225086656288 (change=-0.17001254903442653 %)
[2026-01-26 20:08:28] 2026-01-26 19:07:56,246 | INFO     | right removable region: 101
[2026-01-26 20:08:28] 2026-01-26 19:07:56,247 | INFO     | sum of square deviations: 329031285.5
[2026-01-26 20:08:28] 2026-01-26 19:07:56,247 | INFO     | sum of deviations: -30933044154.49998
[2026-01-26 20:08:28] 2026-01-26 19:07:56,247 | INFO     | mean x: 1769451351.5
[2026-01-26 20:08:28] 2026-01-26 19:07:56,248 | INFO     | mean y: 2908006.225490196
[2026-01-26 20:08:28] 2026-01-26 19:07:56,248 | INFO     | intersect: 166353401704.76215
[2026-01-26 20:08:28] 2026-01-26 19:07:56,248 | INFO     | chi2: 0.14059025564071437
[2026-01-26 20:08:28] 2026-01-26 19:07:56,248 | INFO     | current chi2=0.14059025564071437 (change=92.03914726759183 %)
[2026-01-26 20:08:28] 2026-01-26 19:07:56,249 | INFO     | sum of square deviations: 282974608.0
[2026-01-26 20:08:28] 2026-01-26 19:07:56,249 | INFO     | sum of deviations: -28576252760.0
[2026-01-26 20:08:28] 2026-01-26 19:07:56,250 | INFO     | mean x: 1769451504.0
[2026-01-26 20:08:28] 2026-01-26 19:07:56,250 | INFO     | mean y: 2900165.1340206186
[2026-01-26 20:08:28] 2026-01-26 19:07:56,250 | INFO     | intersect: 178691347804.45773
[2026-01-26 20:08:28] 2026-01-26 19:07:56,250 | INFO     | chi2: 0.13030910066608098
[2026-01-26 20:08:28] 2026-01-26 19:07:56,250 | INFO     | current chi2=0.13030910066608098 (change=7.3128503307565 %)
[2026-01-26 20:08:28] 2026-01-26 19:07:56,251 | INFO     | left removable region: 20
[2026-01-26 20:08:28] 2026-01-26 19:07:56,251 | INFO     | sum of square deviations: 164765880.0
[2026-01-26 20:08:28] 2026-01-26 19:07:56,251 | INFO     | sum of deviations: -19876872143.000004
[2026-01-26 20:08:28] 2026-01-26 19:07:56,252 | INFO     | mean x: 1769451626.0
[2026-01-26 20:08:28] 2026-01-26 19:07:56,252 | INFO     | mean y: 2888425.5061728396
[2026-01-26 20:08:28] 2026-01-26 19:07:56,252 | INFO     | intersect: 213464338898.29495
[2026-01-26 20:08:28] 2026-01-26 19:07:56,252 | INFO     | chi2: 0.11226721280411933
[2026-01-26 20:08:28] 2026-01-26 19:07:56,253 | INFO     | current memory leak: -120.64 B/s (using 81 data points, chi2=0.11)
[2026-01-26 20:08:28] 2026-01-26 19:07:56,253 | INFO     | could have reported an average CPU frequency of 2817 MHz (7 samples)
[2026-01-26 20:08:28] 2026-01-26 19:07:56,253 | INFO     | ..............................
[2026-01-26 20:08:28] 2026-01-26 19:07:56,253 | INFO     | . Timing measurements:
[2026-01-26 20:08:28] 2026-01-26 19:07:56,254 | INFO     | . get job = 0 s
[2026-01-26 20:08:28] 2026-01-26 19:07:56,254 | INFO     | . initial setup = 6 s
[2026-01-26 20:08:28] 2026-01-26 19:07:56,254 | INFO     | . payload setup = 7 s
[2026-01-26 20:08:28] 2026-01-26 19:07:56,254 | INFO     | . stage-in = 0 s
[2026-01-26 20:08:28] 2026-01-26 19:07:56,254 | INFO     | . payload execution = 6508 s
[2026-01-26 20:08:28] 2026-01-26 19:07:56,254 | INFO     | . stage-out = 0 s
[2026-01-26 20:08:28] 2026-01-26 19:07:56,255 | INFO     | . log creation = 0 s
[2026-01-26 20:08:28] 2026-01-26 19:07:56,255 | INFO     | ..............................
[2026-01-26 20:08:28] 2026-01-26 19:07:56,405 | INFO     | 
[2026-01-26 20:08:28] 2026-01-26 19:07:56,405 | INFO     | job summary report
[2026-01-26 20:08:28] 2026-01-26 19:07:56,406 | INFO     | --------------------------------------------------
[2026-01-26 20:08:28] 2026-01-26 19:07:56,406 | INFO     | PanDA job id: 6983773576
[2026-01-26 20:08:28] 2026-01-26 19:07:56,406 | INFO     | task id: 48318034
[2026-01-26 20:08:28] 2026-01-26 19:07:56,406 | INFO     | errors: (none)
[2026-01-26 20:08:28] 2026-01-26 19:07:56,406 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 20:08:28] 2026-01-26 19:07:56,406 | INFO     | pilot state: finished 
[2026-01-26 20:08:28] 2026-01-26 19:07:56,407 | INFO     | transexitcode: 0
[2026-01-26 20:08:28] 2026-01-26 19:07:56,407 | INFO     | exeerrorcode: 0
[2026-01-26 20:08:28] 2026-01-26 19:07:56,407 | INFO     | exeerrordiag: 
[2026-01-26 20:08:28] 2026-01-26 19:07:56,407 | INFO     | exitcode: 0
[2026-01-26 20:08:28] 2026-01-26 19:07:56,407 | INFO     | exitmsg: OK
[2026-01-26 20:08:28] 2026-01-26 19:07:56,407 | INFO     | cpuconsumptiontime: 72926 s
[2026-01-26 20:08:28] 2026-01-26 19:07:56,408 | INFO     | nevents: 400
[2026-01-26 20:08:28] 2026-01-26 19:07:56,408 | INFO     | neventsw: 0
[2026-01-26 20:08:28] 2026-01-26 19:07:56,408 | INFO     | pid: 851713
[2026-01-26 20:08:28] 2026-01-26 19:07:56,408 | INFO     | pgrp: 851713
[2026-01-26 20:08:28] 2026-01-26 19:07:56,408 | INFO     | corecount: 12
[2026-01-26 20:08:28] 2026-01-26 19:07:56,408 | INFO     | event service: False
[2026-01-26 20:08:28] 2026-01-26 19:07:56,409 | INFO     | sizes: {0: 2283769, 1: 2284230, 6519: 2311324, 6521: 2320322, 6522: 2320572}
[2026-01-26 20:08:28] 2026-01-26 19:07:56,409 | INFO     | --------------------------------------------------
[2026-01-26 20:08:28] 2026-01-26 19:07:56,409 | INFO     | 
[2026-01-26 20:08:28] 2026-01-26 19:07:56,409 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-26 20:08:28] 2026-01-26 19:07:56,429 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 20:08:28] 2026-01-26 19:07:56,429 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 20:08:28] 2026-01-26 19:07:56,429 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 20:08:28] 2026-01-26 19:07:56,429 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 20:08:28] 2026-01-26 19:07:56,430 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 20:08:28] 2026-01-26 19:07:56,430 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 20:08:28] 2026-01-26 19:07:56,430 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 20:08:28] 2026-01-26 19:07:56,430 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 20:08:28] 2026-01-26 19:07:56,430 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 20:08:28] 2026-01-26 19:07:56,430 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 20:08:28] 2026-01-26 19:07:56,431 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 20:08:28] 2026-01-26 19:07:56,431 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 20:08:28] 2026-01-26 19:07:56,431 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 20:08:28] 2026-01-26 19:07:56,431 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 20:08:28] 2026-01-26 19:07:56,431 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 20:08:28] 2026-01-26 19:07:56,432 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 20:08:28] 2026-01-26 19:07:56,432 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 20:08:28] 2026-01-26 19:07:56,432 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 20:08:28] 2026-01-26 19:07:56,432 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 20:08:28] 2026-01-26 19:07:56,432 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 20:08:28] 2026-01-26 19:07:56,432 | INFO     | job 6983773576 has completed (purged errors)
[2026-01-26 20:08:28] 2026-01-26 19:07:56,433 | INFO     | overall cleanup function is called
[2026-01-26 20:08:28] 2026-01-26 19:07:56,830 | WARNING  | process 851713 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 20:08:28] 2026-01-26 19:07:56,974 | INFO     | using path: /var/lib/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 20:08:28] 2026-01-26 19:07:56,976 | INFO     | using path: /var/lib/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 20:08:28] 2026-01-26 19:07:56,976 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 20:08:28] 2026-01-26 19:07:56,976 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 20:08:28] 2026-01-26 19:07:56,977 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/slots/0/PanDA_Pilot-6983773576/payload.stdout) since it has not been created yet
[2026-01-26 20:08:28] 2026-01-26 19:07:56,977 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-26 20:08:28] 2026-01-26 19:07:56,995 | INFO     | sufficient remaining disk space (776919318528 B)
[2026-01-26 20:08:28] 2026-01-26 19:07:56,995 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-26 20:08:28] 2026-01-26 19:07:56,996 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/0/PanDA_Pilot-6983773576/HITS.48318034._002704.pool.root.1 since it does not exist
[2026-01-26 20:08:28] 2026-01-26 19:07:57,167 | INFO     | number of running child processes to parent process 851713: 1
[2026-01-26 20:08:28] 2026-01-26 19:07:57,168 | INFO     | maximum number of monitored processes: 6
[2026-01-26 20:08:28] 2026-01-26 19:07:57,168 | INFO     | aborting job monitoring since job object (job id=6983773576) has expired
[2026-01-26 20:08:28] 2026-01-26 19:07:57,441 | INFO     | --- collectZombieJob: --- 10, [851713]
[2026-01-26 20:08:28] 2026-01-26 19:07:57,442 | INFO     | zombie collector waiting for pid 851713
[2026-01-26 20:08:28] 2026-01-26 19:07:57,442 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 20:08:28] 2026-01-26 19:07:57,442 | INFO     | collected zombie processes
[2026-01-26 20:08:28] 2026-01-26 19:07:57,442 | INFO     | will attempt to kill all subprocesses of pid=851713
[2026-01-26 20:08:28] 2026-01-26 19:07:57,613 | INFO     | process IDs to be killed: [851713] (in reverse order)
[2026-01-26 20:08:28] 2026-01-26 19:07:57,667 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 20:08:28] 2026-01-26 19:07:57,667 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 20:08:28] 2026-01-26 19:07:57,674 | INFO     | did not find any defunct processes belonging to 851713
[2026-01-26 20:08:28] 2026-01-26 19:07:57,679 | INFO     | did not find any defunct processes belonging to 851713
[2026-01-26 20:08:28] 2026-01-26 19:07:57,680 | INFO     | ready for new job
[2026-01-26 20:08:28] 2026-01-26 19:07:57,680 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 20:08:28] 2026-01-26 19:07:57,682 | INFO     | **************************************
[2026-01-26 20:08:28] 2026-01-26 19:07:57,682 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 20:08:28] 2026-01-26 19:07:57,682 | INFO     | **************************************
[2026-01-26 20:08:28] 2026-01-26 19:07:57,683 | INFO     | 
[2026-01-26 20:08:28] 2026-01-26 19:07:57,684 | INFO     | architecture information:
[2026-01-26 20:08:28] 2026-01-26 19:07:57,684 | INFO     | executing command: cat /etc/os-release
[2026-01-26 20:08:28] 2026-01-26 19:07:57,700 | INFO     | cat /etc/os-release:
[2026-01-26 20:08:28] NAME="CentOS Linux"
[2026-01-26 20:08:28] VERSION="7 (Core)"
[2026-01-26 20:08:28] ID="centos"
[2026-01-26 20:08:28] ID_LIKE="rhel fedora"
[2026-01-26 20:08:28] VERSION_ID="7"
[2026-01-26 20:08:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 20:08:28] ANSI_COLOR="0;31"
[2026-01-26 20:08:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 20:08:28] HOME_URL="https://www.centos.org/"
[2026-01-26 20:08:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 20:08:28] 
[2026-01-26 20:08:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 20:08:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 20:08:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 20:08:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 20:08:28] 
[2026-01-26 20:08:28] 2026-01-26 19:07:57,700 | INFO     | **************************************
[2026-01-26 20:08:28] 2026-01-26 19:07:58,203 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-26 20:08:28] 2026-01-26 19:07:58,221 | INFO     | sufficient remaining disk space (776920367104 B)
[2026-01-26 20:08:28] 2026-01-26 19:07:58,222 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 20:08:28] 2026-01-26 19:07:58,222 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 20:08:28] 2026-01-26 19:07:58,222 | INFO     | update_server=False
[2026-01-26 20:08:28] 2026-01-26 19:07:58,222 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 20:08:28] 2026-01-26 19:07:58,223 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 20:08:28] 2026-01-26 19:07:58,223 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:08:28] 2026-01-26 19:07:58,223 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 20:08:28] 2026-01-26 19:07:58,224 | INFO     | aborting loop
[2026-01-26 20:08:28] 2026-01-26 19:07:58,476 | INFO     | all data control threads have been joined
[2026-01-26 20:08:28] 2026-01-26 19:07:58,659 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 20:08:28] 2026-01-26 19:07:59,228 | INFO     | [job] retrieve thread has finished
[2026-01-26 20:08:28] 2026-01-26 19:07:59,229 | INFO     | [job] queue monitor thread has finished
[2026-01-26 20:08:28] 2026-01-26 19:07:59,229 | INFO     | [job] job monitor thread has finished
[2026-01-26 20:08:28] 2026-01-26 19:07:59,263 | INFO     | all job control threads have been joined
[2026-01-26 20:08:28] 2026-01-26 19:07:59,378 | INFO     | all payload control threads have been joined
[2026-01-26 20:08:28] 2026-01-26 19:07:59,397 | INFO     | [data] copytool_in thread has finished
[2026-01-26 20:08:28] 2026-01-26 19:07:59,482 | INFO     | [data] control thread has finished
[2026-01-26 20:08:28] 2026-01-26 19:07:59,724 | INFO     | [payload] failed_post thread has finished
[2026-01-26 20:08:28] 2026-01-26 19:07:59,845 | INFO     | [job] validate thread has finished
[2026-01-26 20:08:28] 2026-01-26 19:08:00,044 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 20:08:28] 2026-01-26 19:08:00,241 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 20:08:28] 2026-01-26 19:08:00,268 | INFO     | [job] control thread has finished
[2026-01-26 20:08:28] 2026-01-26 19:08:00,384 | INFO     | [payload] control thread has finished
[2026-01-26 20:08:28] 2026-01-26 19:08:00,538 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 20:08:28] 2026-01-26 19:08:00,599 | INFO     | [payload] validate_post thread has finished
[2026-01-26 20:08:28] 2026-01-26 19:08:00,659 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 20:08:28] 2026-01-26 19:08:00,664 | INFO     | [data] copytool_out thread has finished
[2026-01-26 20:08:28] 2026-01-26 19:08:02,229 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 20:08:28] 2026-01-26 19:08:22,776 | INFO     | [monitor] cgroup control has ended
[2026-01-26 20:08:28] 2026-01-26 19:08:22,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140385184667456)>', '<ExcThread(monitor, started 140384420226816)>']
[2026-01-26 20:08:28] 2026-01-26 19:08:27,833 | INFO     | all workflow threads have been joined
[2026-01-26 20:08:28] 2026-01-26 19:08:27,833 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 20:08:28] 2026-01-26 19:08:27,834 | INFO     | traces error code: 0
[2026-01-26 20:08:28] 2026-01-26 19:08:27,834 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 20:08:28] 2026-01-26 19:08:28,653 | INFO     | PID=846365 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 20:08:28] 2026-01-26 19:08:28,653 | INFO     | .. there are 2 such processes running
[2026-01-26 20:08:28] 2026-01-26 19:08:28,654 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 20:08:28] 2026-01-26 19:08:28,654 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 20:08:28] 2026-01-26 19:08:28,654 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 20:08:28] 2026-01-26 19:08:28,654 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 20:08:28] 2026-01-26 19:08:28,654 | INFO     | [monitor] control thread has ended
[2026-01-26 20:08:28] 2026-01-26 19:08:28,769 [wrapper] ==== pilot stdout END ====
[2026-01-26 20:08:28] 2026-01-26 19:08:28,772 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 20:08:28] 2026-01-26 19:08:28,774 [wrapper] pilotpid: 846365
[2026-01-26 20:08:28] 2026-01-26 19:08:28,776 [wrapper] Pilot exit status: 0
[2026-01-26 20:08:28] 2026-01-26 19:08:28,786 [wrapper] pandaids: 6983773576
[2026-01-26 20:08:28] 2026-01-26 19:08:28,822 [wrapper] cleanup supervisor_pilot  888042 846366
[2026-01-26 20:08:28] 2026-01-26 19:08:28,825 [wrapper] Test setup, not cleaning
[2026-01-26 20:08:28] 2026-01-26 19:08:28,827 [wrapper] apfmon messages muted
[2026-01-26 20:08:28] 2026-01-26 19:08:28,830 [wrapper] ==== wrapper stdout END ====
[2026-01-26 20:08:28] 2026-01-26 19:08:28,832 [wrapper] ==== wrapper stderr END ====
[2026-01-26 20:08:28]  *** Error codes and diagnostics ***
[2026-01-26 20:08:28]     "exeErrorCode": 0,
[2026-01-26 20:08:28]     "exeErrorDiag": "",
[2026-01-26 20:08:28]     "pilotErrorCode": 0,
[2026-01-26 20:08:28]     "pilotErrorDiag": "",
[2026-01-26 20:08:28]  *** Listing of results directory ***
[2026-01-26 20:08:28] total 665400
[2026-01-26 20:08:28] -rw-r--r--. 1 boinc boinc    584422 Jan 26 06:14 pilot3.tar.gz
[2026-01-26 20:08:28] -rwx------. 1 boinc boinc     36322 Jan 26 06:17 runpilot2-wrapper.sh
[2026-01-26 20:08:28] -rw-r--r--. 1 boinc boinc      5111 Jan 26 06:22 queuedata.json
[2026-01-26 20:08:28] -rw-r--r--. 1 boinc boinc       100 Jan 26 18:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 20:08:28] -rwxr-xr-x. 1 boinc boinc      7986 Jan 26 18:18 run_atlas
[2026-01-26 20:08:28] -rw-r--r--. 1 boinc boinc       105 Jan 26 18:18 job.xml
[2026-01-26 20:08:28] -rw-r--r--. 1 boinc boinc      6290 Jan 26 18:18 init_data.xml
[2026-01-26 20:08:28] -rw-r--r--. 2 boinc boinc 491651873 Jan 26 18:18 EVNT.48318032._000068.pool.root.1
[2026-01-26 20:08:28] -rw-r--r--. 2 boinc boinc    597763 Jan 26 18:18 input.tar.gz
[2026-01-26 20:08:28] -rw-r--r--. 2 boinc boinc     15845 Jan 26 18:18 start_atlas.sh
[2026-01-26 20:08:28] drwxrwx--x. 2 boinc boinc      4096 Jan 26 18:18 shared
[2026-01-26 20:08:28] -rw-r--r--. 1 boinc boinc         0 Jan 26 18:18 boinc_lockfile
[2026-01-26 20:08:28] -rw-r--r--. 1 boinc boinc      2534 Jan 26 18:18 pandaJob.out
[2026-01-26 20:08:28] -rw-------. 1 boinc boinc   1006384 Jan 26 18:19 agis_schedconf.cvmfs.json
[2026-01-26 20:08:28] -rw-------. 1 boinc boinc   1516246 Jan 26 18:19 agis_ddmendpoints.agis.ALL.json
[2026-01-26 20:08:28] -rw-------. 1 boinc boinc       436 Jan 26 18:19 workernode_map.json
[2026-01-26 20:08:28] drwx------. 5 boinc boinc      4096 Jan 26 18:19 pilot3
[2026-01-26 20:08:28] -rw-------. 1 boinc boinc 183074058 Jan 26 20:07 HITS.48318034._002704.pool.root.1
[2026-01-26 20:08:28] -rw-------. 1 boinc boinc        95 Jan 26 20:07 pilot_heartbeat.json
[2026-01-26 20:08:28] -rw-r--r--. 1 boinc boinc       530 Jan 26 20:07 boinc_task_state.xml
[2026-01-26 20:08:28] -rw-------. 1 boinc boinc      1021 Jan 26 20:07 memory_monitor_summary.json
[2026-01-26 20:08:28] -rw-------. 1 boinc boinc    403409 Jan 26 20:07 log.48318034._002704.job.log.tgz.1
[2026-01-26 20:08:28] -rw-------. 1 boinc boinc      6358 Jan 26 20:07 heartbeat.json
[2026-01-26 20:08:28] -rw-r--r--. 1 boinc boinc      8192 Jan 26 20:08 boinc_mmap_file
[2026-01-26 20:08:28] -rw-r--r--. 1 boinc boinc        27 Jan 26 20:08 wrapper_checkpoint.txt
[2026-01-26 20:08:28] -rw-------. 1 boinc boinc       821 Jan 26 20:08 pilotlog.txt
[2026-01-26 20:08:28] -rw-------. 1 boinc boinc    950215 Jan 26 20:08 log.48318034._002704.job.log.1
[2026-01-26 20:08:28] -rw-------. 1 boinc boinc       357 Jan 26 20:08 output.list
[2026-01-26 20:08:28] -rw-r--r--. 1 boinc boinc       620 Jan 26 20:08 runtime_log
[2026-01-26 20:08:28] -rw-------. 1 boinc boinc   1372160 Jan 26 20:08 result.tar.gz
[2026-01-26 20:08:28] -rw-r--r--. 1 boinc boinc      8840 Jan 26 20:08 runtime_log.err
[2026-01-26 20:08:28] -rw-------. 1 boinc boinc       656 Jan 26 20:08 eEINDmFAU48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUg2KDmkokXBo.diag
[2026-01-26 20:08:28] -rw-r--r--. 1 boinc boinc     21529 Jan 26 20:08 stderr.txt
[2026-01-26 20:08:28] HITS file was successfully produced:
[2026-01-26 20:08:28] -rw-------. 1 boinc boinc 183074058 Jan 26 20:07 shared/HITS.pool.root.1
[2026-01-26 20:08:28]  *** Contents of shared directory: ***
[2026-01-26 20:08:28] total 660864
[2026-01-26 20:08:28] -rw-r--r--. 2 boinc boinc 491651873 Jan 26 18:18 ATLAS.root_0
[2026-01-26 20:08:28] -rw-r--r--. 2 boinc boinc    597763 Jan 26 18:18 input.tar.gz
[2026-01-26 20:08:28] -rw-r--r--. 2 boinc boinc     15845 Jan 26 18:18 start_atlas.sh
[2026-01-26 20:08:28] -rw-------. 1 boinc boinc 183074058 Jan 26 20:07 HITS.pool.root.1
[2026-01-26 20:08:28] -rw-------. 1 boinc boinc   1372160 Jan 26 20:08 result.tar.gz
20:08:30 (842182): run_atlas exited; CPU time 73050.232942
20:08:30 (842182): called boinc_finish(0)

</stderr_txt>
]]>

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