Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:22:59 (2690972): wrapper (7.7.26015): starting
05:22:59 (2690972): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 05:23:00] Arguments: --nthreads 8
[2026-01-26 05:23:00] Threads: 8
[2026-01-26 05:23:00] Checking for CVMFS
[2026-01-26 05:23:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 05:23:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 05:23:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 05:23:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 05:23:00] 2.13.3.0 7038 47232 116820 155543 2 56 32129182 40960000 18481 16776704 0 85682405 99.746 57213727 42325 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 05:23:00] CVMFS is ok
[2026-01-26 05:23:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 05:23:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 05:23:00] Further information can be found at the LHC@home message board.
[2026-01-26 05:23:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 05:23:00] Checking for apptainer binary...
[2026-01-26 05:23:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 05:23:00] Running /usr/bin/apptainer --version
[2026-01-26 05:23:00] apptainer version 1.4.5-2.el9
[2026-01-26 05:23:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 05:23:01] c-212-4.aglt2.org
[2026-01-26 05:23:01] apptainer works
[2026-01-26 05:23:01] Set ATHENA_PROC_NUMBER=8
[2026-01-26 05:23:01] Set ATHENA_CORE_NUMBER=8
[2026-01-26 05:23:01] Starting ATLAS job with PandaID=6984042582
[2026-01-26 05:23:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 07:52:28]  *** The last 200 lines of the pilot log: ***
[2026-01-26 07:52:28] 2026-01-26 12:51:34,193 | INFO     | mean x: 1769427480.0551724
[2026-01-26 07:52:28] 2026-01-26 12:51:34,193 | INFO     | mean y: 2558018.255172414
[2026-01-26 07:52:28] 2026-01-26 12:51:34,194 | INFO     | intersect: 32766113190.280575
[2026-01-26 07:52:28] 2026-01-26 12:51:34,194 | INFO     | chi2: 2.543246055983787
[2026-01-26 07:52:28] 2026-01-26 12:51:34,194 | INFO     | sum of square deviations: 850846862.5428559
[2026-01-26 07:52:28] 2026-01-26 12:51:34,194 | INFO     | sum of deviations: -7484314070.714284
[2026-01-26 07:52:28] 2026-01-26 12:51:34,194 | INFO     | mean x: 1769427327.557143
[2026-01-26 07:52:28] 2026-01-26 12:51:34,194 | INFO     | mean y: 2573785.214285714
[2026-01-26 07:52:28] 2026-01-26 12:51:34,194 | INFO     | intersect: 15567007795.306519
[2026-01-26 07:52:28] 2026-01-26 12:51:34,194 | INFO     | chi2: 1.8761451624790808
[2026-01-26 07:52:28] 2026-01-26 12:51:34,194 | INFO     | current chi2=1.8761451624790808 (change=26.2302930514781 %)
[2026-01-26 07:52:28] 2026-01-26 12:51:34,195 | INFO     | sum of square deviations: 762903467.5259277
[2026-01-26 07:52:28] 2026-01-26 12:51:34,195 | INFO     | sum of deviations: -6698108802.259263
[2026-01-26 07:52:28] 2026-01-26 12:51:34,195 | INFO     | mean x: 1769427175.0592592
[2026-01-26 07:52:28] 2026-01-26 12:51:34,195 | INFO     | mean y: 2575150.407407407
[2026-01-26 07:52:28] 2026-01-26 12:51:34,195 | INFO     | intersect: 15537719819.045809
[2026-01-26 07:52:28] 2026-01-26 12:51:34,195 | INFO     | chi2: 1.876191887780684
[2026-01-26 07:52:28] 2026-01-26 12:51:34,195 | INFO     | current chi2=1.876191887780684 (change=-0.002490495007405008 %)
[2026-01-26 07:52:28] 2026-01-26 12:51:34,195 | INFO     | right removable region: 134
[2026-01-26 07:52:28] 2026-01-26 12:51:34,195 | INFO     | sum of square deviations: 850841982.5428559
[2026-01-26 07:52:28] 2026-01-26 12:51:34,196 | INFO     | sum of deviations: -40939285579.314285
[2026-01-26 07:52:28] 2026-01-26 12:51:34,196 | INFO     | mean x: 1769427632.557143
[2026-01-26 07:52:28] 2026-01-26 12:51:34,196 | INFO     | mean y: 2595324.9142857143
[2026-01-26 07:52:28] 2026-01-26 12:51:34,196 | INFO     | intersect: 85140734541.6615
[2026-01-26 07:52:28] 2026-01-26 12:51:34,196 | INFO     | chi2: 0.9875409895180189
[2026-01-26 07:52:28] 2026-01-26 12:51:34,196 | INFO     | current chi2=0.9875409895180189 (change=61.17005717183683 %)
[2026-01-26 07:52:28] 2026-01-26 12:51:34,196 | INFO     | sum of square deviations: 762893707.5259277
[2026-01-26 07:52:28] 2026-01-26 12:51:34,196 | INFO     | sum of deviations: -43187259351.54814
[2026-01-26 07:52:28] 2026-01-26 12:51:34,196 | INFO     | mean x: 1769427785.0592592
[2026-01-26 07:52:28] 2026-01-26 12:51:34,196 | INFO     | mean y: 2599168.3185185185
[2026-01-26 07:52:28] 2026-01-26 12:51:34,197 | INFO     | intersect: 100169550217.12173
[2026-01-26 07:52:28] 2026-01-26 12:51:34,197 | INFO     | chi2: 0.9273491304745436
[2026-01-26 07:52:28] 2026-01-26 12:51:34,197 | INFO     | current chi2=0.9273491304745436 (change=6.09512513225934 %)
[2026-01-26 07:52:28] 2026-01-26 12:51:34,197 | INFO     | left removable region: 20
[2026-01-26 07:52:28] 2026-01-26 12:51:34,197 | INFO     | sum of square deviations: 459388908.07017523
[2026-01-26 07:52:28] 2026-01-26 12:51:34,197 | INFO     | sum of deviations: -21655319877.210518
[2026-01-26 07:52:28] 2026-01-26 12:51:34,197 | INFO     | mean x: 1769427754.5614035
[2026-01-26 07:52:28] 2026-01-26 12:51:34,197 | INFO     | mean y: 2599686.3157894737
[2026-01-26 07:52:28] 2026-01-26 12:51:34,197 | INFO     | intersect: 83412371562.62813
[2026-01-26 07:52:28] 2026-01-26 12:51:34,197 | INFO     | chi2: 0.20246848899722591
[2026-01-26 07:52:28] 2026-01-26 12:51:34,198 | INFO     | current memory leak: -47.14 B/s (using 114 data points, chi2=0.20)
[2026-01-26 07:52:28] 2026-01-26 12:51:34,198 | INFO     | could have reported an average CPU frequency of 3224 MHz (8 samples)
[2026-01-26 07:52:28] 2026-01-26 12:51:34,198 | INFO     | ..............................
[2026-01-26 07:52:28] 2026-01-26 12:51:34,198 | INFO     | . Timing measurements:
[2026-01-26 07:52:28] 2026-01-26 12:51:34,198 | INFO     | . get job = 0 s
[2026-01-26 07:52:28] 2026-01-26 12:51:34,198 | INFO     | . initial setup = 25 s
[2026-01-26 07:52:28] 2026-01-26 12:51:34,198 | INFO     | . payload setup = 13 s
[2026-01-26 07:52:28] 2026-01-26 12:51:34,198 | INFO     | . stage-in = 0 s
[2026-01-26 07:52:28] 2026-01-26 12:51:34,198 | INFO     | . payload execution = 8814 s
[2026-01-26 07:52:28] 2026-01-26 12:51:34,198 | INFO     | . stage-out = 1 s
[2026-01-26 07:52:28] 2026-01-26 12:51:34,198 | INFO     | . log creation = 0 s
[2026-01-26 07:52:28] 2026-01-26 12:51:34,198 | INFO     | ..............................
[2026-01-26 07:52:28] 2026-01-26 12:51:34,324 | INFO     | 
[2026-01-26 07:52:28] 2026-01-26 12:51:34,324 | INFO     | job summary report
[2026-01-26 07:52:28] 2026-01-26 12:51:34,324 | INFO     | --------------------------------------------------
[2026-01-26 07:52:28] 2026-01-26 12:51:34,324 | INFO     | PanDA job id: 6984042582
[2026-01-26 07:52:28] 2026-01-26 12:51:34,324 | INFO     | task id: 47929392
[2026-01-26 07:52:28] 2026-01-26 12:51:34,325 | INFO     | errors: (none)
[2026-01-26 07:52:28] 2026-01-26 12:51:34,325 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 07:52:28] 2026-01-26 12:51:34,325 | INFO     | pilot state: finished 
[2026-01-26 07:52:28] 2026-01-26 12:51:34,325 | INFO     | transexitcode: 0
[2026-01-26 07:52:28] 2026-01-26 12:51:34,325 | INFO     | exeerrorcode: 0
[2026-01-26 07:52:28] 2026-01-26 12:51:34,325 | INFO     | exeerrordiag: 
[2026-01-26 07:52:28] 2026-01-26 12:51:34,325 | INFO     | exitcode: 0
[2026-01-26 07:52:28] 2026-01-26 12:51:34,325 | INFO     | exitmsg: OK
[2026-01-26 07:52:28] 2026-01-26 12:51:34,325 | INFO     | cpuconsumptiontime: 30575 s
[2026-01-26 07:52:28] 2026-01-26 12:51:34,325 | INFO     | nevents: 400
[2026-01-26 07:52:28] 2026-01-26 12:51:34,325 | INFO     | neventsw: 0
[2026-01-26 07:52:28] 2026-01-26 12:51:34,325 | INFO     | pid: 2699714
[2026-01-26 07:52:28] 2026-01-26 12:51:34,325 | INFO     | pgrp: 2699714
[2026-01-26 07:52:28] 2026-01-26 12:51:34,325 | INFO     | corecount: 8
[2026-01-26 07:52:28] 2026-01-26 12:51:34,325 | INFO     | event service: False
[2026-01-26 07:52:28] 2026-01-26 12:51:34,325 | INFO     | sizes: {0: 2283848, 1: 2284309, 11: 2284309, 8831: 2312518, 8832: 2321516, 8833: 2321572, 8836: 2321894}
[2026-01-26 07:52:28] 2026-01-26 12:51:34,325 | INFO     | --------------------------------------------------
[2026-01-26 07:52:28] 2026-01-26 12:51:34,326 | INFO     | 
[2026-01-26 07:52:28] 2026-01-26 12:51:34,326 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-26 07:52:28] 2026-01-26 12:51:34,528 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 07:52:28] 2026-01-26 12:51:34,528 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 07:52:28] 2026-01-26 12:51:34,528 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 07:52:28] 2026-01-26 12:51:34,528 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 07:52:28] 2026-01-26 12:51:34,528 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 07:52:28] 2026-01-26 12:51:34,528 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 07:52:28] 2026-01-26 12:51:34,528 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 07:52:28] 2026-01-26 12:51:34,528 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 07:52:28] 2026-01-26 12:51:34,528 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 07:52:28] 2026-01-26 12:51:34,528 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 07:52:28] 2026-01-26 12:51:34,528 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 07:52:28] 2026-01-26 12:51:34,529 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 07:52:28] 2026-01-26 12:51:34,529 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 07:52:28] 2026-01-26 12:51:34,529 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 07:52:28] 2026-01-26 12:51:34,529 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 07:52:28] 2026-01-26 12:51:34,529 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 07:52:28] 2026-01-26 12:51:34,529 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 07:52:28] 2026-01-26 12:51:34,529 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 07:52:28] 2026-01-26 12:51:34,529 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 07:52:28] 2026-01-26 12:51:34,529 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 07:52:28] 2026-01-26 12:51:34,529 | INFO     | job 6984042582 has completed (purged errors)
[2026-01-26 07:52:28] 2026-01-26 12:51:34,529 | INFO     | overall cleanup function is called
[2026-01-26 07:52:28] 2026-01-26 12:51:35,537 | INFO     | --- collectZombieJob: --- 10, [2699714]
[2026-01-26 07:52:28] 2026-01-26 12:51:35,537 | INFO     | zombie collector waiting for pid 2699714
[2026-01-26 07:52:28] 2026-01-26 12:51:35,537 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 07:52:28] 2026-01-26 12:51:35,537 | INFO     | collected zombie processes
[2026-01-26 07:52:28] 2026-01-26 12:51:35,538 | INFO     | will attempt to kill all subprocesses of pid=2699714
[2026-01-26 07:52:28] 2026-01-26 12:51:36,141 | INFO     | process IDs to be killed: [2699714] (in reverse order)
[2026-01-26 07:52:28] 2026-01-26 12:51:36,379 | WARNING  | process 2699714 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 07:52:28] 2026-01-26 12:51:36,382 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 07:52:28] 2026-01-26 12:51:36,382 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 07:52:28] 2026-01-26 12:51:36,409 | INFO     | did not find any defunct processes belonging to 2699714
[2026-01-26 07:52:28] 2026-01-26 12:51:36,425 | INFO     | did not find any defunct processes belonging to 2699714
[2026-01-26 07:52:28] 2026-01-26 12:51:36,425 | INFO     | ready for new job
[2026-01-26 07:52:28] 2026-01-26 12:51:36,425 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 07:52:28] 2026-01-26 12:51:36,427 | INFO     | **************************************
[2026-01-26 07:52:28] 2026-01-26 12:51:36,427 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 07:52:28] 2026-01-26 12:51:36,427 | INFO     | **************************************
[2026-01-26 07:52:28] 2026-01-26 12:51:36,427 | INFO     | 
[2026-01-26 07:52:28] 2026-01-26 12:51:36,432 | INFO     | architecture information:
[2026-01-26 07:52:28] 2026-01-26 12:51:36,432 | INFO     | executing command: cat /etc/os-release
[2026-01-26 07:52:28] 2026-01-26 12:51:36,502 | INFO     | cat /etc/os-release:
[2026-01-26 07:52:28] NAME="CentOS Linux"
[2026-01-26 07:52:28] VERSION="7 (Core)"
[2026-01-26 07:52:28] ID="centos"
[2026-01-26 07:52:28] ID_LIKE="rhel fedora"
[2026-01-26 07:52:28] VERSION_ID="7"
[2026-01-26 07:52:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 07:52:28] ANSI_COLOR="0;31"
[2026-01-26 07:52:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 07:52:28] HOME_URL="https://www.centos.org/"
[2026-01-26 07:52:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 07:52:28] 
[2026-01-26 07:52:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 07:52:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 07:52:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 07:52:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 07:52:28] 
[2026-01-26 07:52:28] 2026-01-26 12:51:36,503 | INFO     | **************************************
[2026-01-26 07:52:28] 2026-01-26 12:51:36,820 | INFO     | using path: /tmp/boinchome/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 07:52:28] 2026-01-26 12:51:36,822 | INFO     | using path: /tmp/boinchome/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 07:52:28] 2026-01-26 12:51:36,822 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 07:52:28] 2026-01-26 12:51:36,822 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 07:52:28] 2026-01-26 12:51:36,823 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/4/PanDA_Pilot-6984042582/payload.stdout) since it has not been created yet
[2026-01-26 07:52:28] 2026-01-26 12:51:36,823 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-26 07:52:28] 2026-01-26 12:51:36,876 | INFO     | sufficient remaining disk space (124806758400 B)
[2026-01-26 07:52:28] 2026-01-26 12:51:36,877 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-26 07:52:28] 2026-01-26 12:51:36,877 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/4/PanDA_Pilot-6984042582/HITS.47929392._005283.pool.root.1 since it does not exist
[2026-01-26 07:52:28] 2026-01-26 12:51:37,010 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-26 07:52:28] 2026-01-26 12:51:37,124 | INFO     | sufficient remaining disk space (124806758400 B)
[2026-01-26 07:52:28] 2026-01-26 12:51:37,140 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 07:52:28] 2026-01-26 12:51:37,156 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 07:52:28] 2026-01-26 12:51:37,156 | INFO     | update_server=False
[2026-01-26 07:52:28] 2026-01-26 12:51:37,156 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 07:52:28] 2026-01-26 12:51:37,161 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 07:52:28] 2026-01-26 12:51:37,371 | INFO     | number of running child processes to parent process 2699714: 1
[2026-01-26 07:52:28] 2026-01-26 12:51:37,372 | INFO     | maximum number of monitored processes: 6
[2026-01-26 07:52:28] 2026-01-26 12:51:37,372 | INFO     | aborting job monitoring since job object (job id=6984042582) has expired
[2026-01-26 07:52:28] 2026-01-26 12:51:37,372 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 07:52:28] 2026-01-26 12:51:37,372 | INFO     | will abort loop
[2026-01-26 07:52:28] 2026-01-26 12:51:37,408 | INFO     | all data control threads have been joined
[2026-01-26 07:52:28] 2026-01-26 12:51:37,681 | INFO     | all job control threads have been joined
[2026-01-26 07:52:28] 2026-01-26 12:51:37,999 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 07:52:28] 2026-01-26 12:51:38,139 | INFO     | all payload control threads have been joined
[2026-01-26 07:52:28] 2026-01-26 12:51:38,162 | INFO     | [job] retrieve thread has finished
[2026-01-26 07:52:28] 2026-01-26 12:51:38,264 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 07:52:28] 2026-01-26 12:51:38,268 | INFO     | [data] copytool_in thread has finished
[2026-01-26 07:52:28] 2026-01-26 12:51:38,282 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 07:52:28] 2026-01-26 12:51:38,377 | INFO     | [job] job monitor thread has finished
[2026-01-26 07:52:28] 2026-01-26 12:51:38,438 | INFO     | [data] control thread has finished
[2026-01-26 07:52:28] 2026-01-26 12:51:38,565 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 07:52:28] 2026-01-26 12:51:38,687 | INFO     | [job] control thread has finished
[2026-01-26 07:52:28] 2026-01-26 12:51:38,706 | INFO     | [payload] failed_post thread has finished
[2026-01-26 07:52:28] 2026-01-26 12:51:38,870 | INFO     | [payload] validate_post thread has finished
[2026-01-26 07:52:28] 2026-01-26 12:51:39,145 | INFO     | [payload] control thread has finished
[2026-01-26 07:52:28] 2026-01-26 12:51:39,168 | INFO     | [data] copytool_out thread has finished
[2026-01-26 07:52:28] 2026-01-26 12:51:39,282 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 07:52:28] 2026-01-26 12:51:39,326 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 07:52:28] 2026-01-26 12:51:39,469 | INFO     | [job] validate thread has finished
[2026-01-26 07:52:28] 2026-01-26 12:51:40,333 | INFO     | [job] queue monitor thread has finished
[2026-01-26 07:52:28] 2026-01-26 12:51:42,008 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 07:52:28] 2026-01-26 12:52:07,948 | INFO     | PID=2694754 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 07:52:28] 2026-01-26 12:52:07,948 | INFO     | .. there are 16 such processes running
[2026-01-26 07:52:28] 2026-01-26 12:52:07,948 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 07:52:28] 2026-01-26 12:52:07,949 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 07:52:28] 2026-01-26 12:52:07,949 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 07:52:28] 2026-01-26 12:52:22,332 | INFO     | [monitor] cgroup control has ended
[2026-01-26 07:52:28] 2026-01-26 12:52:22,940 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139699331102528)>', '<ExcThread(monitor, started 139698978682624)>']
[2026-01-26 07:52:28] 2026-01-26 12:52:23,043 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 07:52:28] 2026-01-26 12:52:23,043 | INFO     | [monitor] control thread has ended
[2026-01-26 07:52:28] 2026-01-26 12:52:27,966 | INFO     | all workflow threads have been joined
[2026-01-26 07:52:28] 2026-01-26 12:52:27,966 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 07:52:28] 2026-01-26 12:52:27,966 | INFO     | traces error code: 0
[2026-01-26 07:52:28] 2026-01-26 12:52:27,967 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 07:52:28] 2026-01-26 12:52:28,260 [wrapper] ==== pilot stdout END ====
[2026-01-26 07:52:28] 2026-01-26 12:52:28,262 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 07:52:28] 2026-01-26 12:52:28,264 [wrapper] pilotpid: 2694754
[2026-01-26 07:52:28] 2026-01-26 12:52:28,267 [wrapper] Pilot exit status: 0
[2026-01-26 07:52:28] 2026-01-26 12:52:28,286 [wrapper] pandaids: 6984042582
[2026-01-26 07:52:28] 2026-01-26 12:52:28,367 [wrapper] cleanup supervisor_pilot 3036013 2694755
[2026-01-26 07:52:28] 2026-01-26 12:52:28,370 [wrapper] Test setup, not cleaning
[2026-01-26 07:52:28] 2026-01-26 12:52:28,373 [wrapper] apfmon messages muted
[2026-01-26 07:52:28] 2026-01-26 12:52:28,376 [wrapper] ==== wrapper stdout END ====
[2026-01-26 07:52:28] 2026-01-26 12:52:28,379 [wrapper] ==== wrapper stderr END ====
[2026-01-26 07:52:28]  *** Error codes and diagnostics ***
[2026-01-26 07:52:28]     "exeErrorCode": 0,
[2026-01-26 07:52:28]     "exeErrorDiag": "",
[2026-01-26 07:52:28]     "pilotErrorCode": 0,
[2026-01-26 07:52:28]     "pilotErrorDiag": "",
[2026-01-26 07:52:28]  *** Listing of results directory ***
[2026-01-26 07:52:28] total 438660
[2026-01-26 07:52:28] -rw-r--r--. 1 boincer umatlas    584422 Jan 26 00:14 pilot3.tar.gz
[2026-01-26 07:52:28] -rwx------. 1 boincer umatlas     36322 Jan 26 00:17 runpilot2-wrapper.sh
[2026-01-26 07:52:28] -rw-r--r--. 1 boincer umatlas      5111 Jan 26 00:21 queuedata.json
[2026-01-26 07:52:28] -rw-r--r--. 1 boincer umatlas       100 Jan 26 05:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 07:52:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 05:22 run_atlas
[2026-01-26 07:52:28] -rw-r--r--. 1 boincer umatlas       105 Jan 26 05:22 job.xml
[2026-01-26 07:52:28] -rw-r--r--. 2 boincer umatlas 252637258 Jan 26 05:22 EVNT.47929390._000199.pool.root.1
[2026-01-26 07:52:28] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 05:22 start_atlas.sh
[2026-01-26 07:52:28] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 05:22 shared
[2026-01-26 07:52:28] -rw-r--r--. 2 boincer umatlas    597762 Jan 26 05:22 input.tar.gz
[2026-01-26 07:52:28] -rw-r--r--. 1 boincer umatlas         0 Jan 26 05:22 boinc_lockfile
[2026-01-26 07:52:28] -rw-r--r--. 1 boincer umatlas      2551 Jan 26 05:23 pandaJob.out
[2026-01-26 07:52:28] -rw-------. 1 boincer umatlas        57 Jan 26 05:23 setup.sh.local
[2026-01-26 07:52:28] -rw-------. 1 boincer umatlas   1004246 Jan 26 05:23 agis_schedconf.cvmfs.json
[2026-01-26 07:52:28] -rw-------. 1 boincer umatlas   1516246 Jan 26 05:23 agis_ddmendpoints.agis.ALL.json
[2026-01-26 07:52:28] -rw-------. 1 boincer umatlas       429 Jan 26 05:24 workernode_map.json
[2026-01-26 07:52:28] drwx------. 5 boincer umatlas      4096 Jan 26 05:24 pilot3
[2026-01-26 07:52:28] -rw-r--r--. 1 boincer umatlas      6958 Jan 26 07:45 init_data.xml
[2026-01-26 07:52:28] -rw-------. 1 boincer umatlas 189382826 Jan 26 07:50 HITS.47929392._005283.pool.root.1
[2026-01-26 07:52:28] -rw-r--r--. 1 boincer umatlas       529 Jan 26 07:50 boinc_task_state.xml
[2026-01-26 07:52:28] -rw-------. 1 boincer umatlas      1048 Jan 26 07:51 memory_monitor_summary.json
[2026-01-26 07:52:28] -rw-------. 1 boincer umatlas        95 Jan 26 07:51 pilot_heartbeat.json
[2026-01-26 07:52:28] -rw-------. 1 boincer umatlas    389331 Jan 26 07:51 log.47929392._005283.job.log.tgz.1
[2026-01-26 07:52:28] -rw-------. 1 boincer umatlas      6344 Jan 26 07:51 heartbeat.json
[2026-01-26 07:52:28] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 07:52 boinc_mmap_file
[2026-01-26 07:52:28] -rw-r--r--. 1 boincer umatlas        27 Jan 26 07:52 wrapper_checkpoint.txt
[2026-01-26 07:52:28] -rw-------. 1 boincer umatlas      6193 Jan 26 07:52 pilotlog.txt
[2026-01-26 07:52:28] -rw-------. 1 boincer umatlas   1216076 Jan 26 07:52 log.47929392._005283.job.log.1
[2026-01-26 07:52:28] -rw-------. 1 boincer umatlas       357 Jan 26 07:52 output.list
[2026-01-26 07:52:28] -rw-r--r--. 1 boincer umatlas       620 Jan 26 07:52 runtime_log
[2026-01-26 07:52:28] -rw-------. 1 boincer umatlas   1628160 Jan 26 07:52 result.tar.gz
[2026-01-26 07:52:28] -rw-------. 1 boincer umatlas       655 Jan 26 07:52 ySnLDmu9T48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSD9KDmTY8t2m.diag
[2026-01-26 07:52:28] -rw-r--r--. 1 boincer umatlas      9336 Jan 26 07:52 runtime_log.err
[2026-01-26 07:52:28] -rw-r--r--. 1 boincer umatlas     21504 Jan 26 07:52 stderr.txt
[2026-01-26 07:52:28] HITS file was successfully produced:
[2026-01-26 07:52:28] -rw-------. 1 boincer umatlas 189382826 Jan 26 07:50 shared/HITS.pool.root.1
[2026-01-26 07:52:28]  *** Contents of shared directory: ***
[2026-01-26 07:52:28] total 433868
[2026-01-26 07:52:28] -rw-r--r--. 2 boincer umatlas 252637258 Jan 26 05:22 ATLAS.root_0
[2026-01-26 07:52:28] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 05:22 start_atlas.sh
[2026-01-26 07:52:28] -rw-r--r--. 2 boincer umatlas    597762 Jan 26 05:22 input.tar.gz
[2026-01-26 07:52:28] -rw-------. 1 boincer umatlas 189382826 Jan 26 07:50 HITS.pool.root.1
[2026-01-26 07:52:28] -rw-------. 1 boincer umatlas   1628160 Jan 26 07:52 result.tar.gz
07:52:29 (2690972): run_atlas exited; CPU time 30811.145282
07:52:29 (2690972): called boinc_finish(0)

</stderr_txt>
]]>

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