Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:57:34 (1734231): wrapper (7.7.26015): starting
20:57:34 (1734231): wrapper: running run_atlas (--nthreads 2)
[2026-01-26 20:57:34] Arguments: --nthreads 2
[2026-01-26 20:57:34] Threads: 2
[2026-01-26 20:57:34] Checking for CVMFS
[2026-01-26 20:57:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 20:57:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 20:57:34] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 20:57:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 20:57:34] 2.9.2.0 770802 8612 68776 155560 3 50 21220154 36864000 0 130560 0 2868775 99.982 275465 7333 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-26 20:57:34] CVMFS is ok
[2026-01-26 20:57:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 20:57:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 20:57:34] Further information can be found at the LHC@home message board.
[2026-01-26 20:57:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 20:57:34] Checking for apptainer binary...
[2026-01-26 20:57:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 20:57:34] Running /usr/bin/apptainer --version
[2026-01-26 20:57:34] apptainer version 1.4.1-1.1
[2026-01-26 20:57:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 20:57:35] thA337
[2026-01-26 20:57:35] apptainer works
[2026-01-26 20:57:35] Set ATHENA_PROC_NUMBER=2
[2026-01-26 20:57:35] Set ATHENA_CORE_NUMBER=2
[2026-01-26 20:57:35] Starting ATLAS job with PandaID=6984043516
[2026-01-26 20:57:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 22:59:36]  *** The last 200 lines of the pilot log: ***
[2026-01-26 22:59:36] 2026-01-26 21:59:04,537 | INFO     | did not find any defunct processes belonging to 1742663
[2026-01-26 22:59:36] 2026-01-26 21:59:04,537 | INFO     | ready for new job
[2026-01-26 22:59:36] 2026-01-26 21:59:04,537 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 22:59:36] 2026-01-26 21:59:04,537 | INFO     | **************************************
[2026-01-26 22:59:36] 2026-01-26 21:59:04,537 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 22:59:36] 2026-01-26 21:59:04,537 | INFO     | **************************************
[2026-01-26 22:59:36] 2026-01-26 21:59:04,537 | INFO     | 
[2026-01-26 22:59:36] 2026-01-26 21:59:04,538 | INFO     | architecture information:
[2026-01-26 22:59:36] 2026-01-26 21:59:04,538 | INFO     | executing command: cat /etc/os-release
[2026-01-26 22:59:36] 2026-01-26 21:59:04,545 | INFO     | cat /etc/os-release:
[2026-01-26 22:59:36] NAME="CentOS Linux"
[2026-01-26 22:59:36] VERSION="7 (Core)"
[2026-01-26 22:59:36] ID="centos"
[2026-01-26 22:59:36] ID_LIKE="rhel fedora"
[2026-01-26 22:59:36] VERSION_ID="7"
[2026-01-26 22:59:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 22:59:36] ANSI_COLOR="0;31"
[2026-01-26 22:59:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 22:59:36] HOME_URL="https://www.centos.org/"
[2026-01-26 22:59:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 22:59:36] 
[2026-01-26 22:59:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 22:59:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 22:59:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 22:59:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 22:59:36] 
[2026-01-26 22:59:36] 2026-01-26 21:59:04,545 | INFO     | **************************************
[2026-01-26 22:59:36] 2026-01-26 21:59:05,049 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-26 22:59:36] 2026-01-26 21:59:05,060 | INFO     | sufficient remaining disk space (488127856640 B)
[2026-01-26 22:59:36] 2026-01-26 21:59:05,060 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 22:59:36] 2026-01-26 21:59:05,060 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 22:59:36] 2026-01-26 21:59:05,060 | INFO     | update_server=False
[2026-01-26 22:59:36] 2026-01-26 21:59:05,060 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 22:59:36] 2026-01-26 21:59:05,060 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 22:59:36] 2026-01-26 21:59:05,060 | INFO     | aborting loop
[2026-01-26 22:59:36] 2026-01-26 21:59:05,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 22:59:36] 2026-01-26 21:59:05,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 22:59:36] 2026-01-26 21:59:05,706 | INFO     | all job control threads have been joined
[2026-01-26 22:59:36] 2026-01-26 21:59:05,707 | INFO     | all payload control threads have been joined
[2026-01-26 22:59:36] 2026-01-26 21:59:05,962 | INFO     | all data control threads have been joined
[2026-01-26 22:59:36] 2026-01-26 21:59:06,066 | INFO     | [job] retrieve thread has finished
[2026-01-26 22:59:36] 2026-01-26 21:59:06,067 | INFO     | [job] job monitor thread has finished
[2026-01-26 22:59:36] 2026-01-26 21:59:06,067 | INFO     | [job] queue monitor thread has finished
[2026-01-26 22:59:36] 2026-01-26 21:59:06,074 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 22:59:36] 2026-01-26 21:59:06,160 | INFO     | [payload] failed_post thread has finished
[2026-01-26 22:59:36] 2026-01-26 21:59:06,226 | INFO     | [job] validate thread has finished
[2026-01-26 22:59:36] 2026-01-26 21:59:06,276 | INFO     | [monitor] cgroup control has ended
[2026-01-26 22:59:36] 2026-01-26 21:59:06,375 | INFO     | [data] copytool_in thread has finished
[2026-01-26 22:59:36] 2026-01-26 21:59:06,530 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 22:59:36] 2026-01-26 21:59:06,712 | INFO     | [job] control thread has finished
[2026-01-26 22:59:36] 2026-01-26 21:59:06,713 | INFO     | [payload] control thread has finished
[2026-01-26 22:59:36] 2026-01-26 21:59:06,883 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 22:59:36] 2026-01-26 21:59:06,959 | INFO     | [payload] validate_post thread has finished
[2026-01-26 22:59:36] 2026-01-26 21:59:06,968 | INFO     | [data] control thread has finished
[2026-01-26 22:59:36] 2026-01-26 21:59:07,345 | INFO     | [data] copytool_out thread has finished
[2026-01-26 22:59:36] 2026-01-26 21:59:07,447 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 22:59:36] 2026-01-26 21:59:10,890 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 22:59:36] 2026-01-26 21:59:15,174 | INFO     | job.realtimelogging is not enabled
[2026-01-26 22:59:36] 2026-01-26 21:59:16,180 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 22:59:36] 2026-01-26 21:59:17,032 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140205312755520)>', '<ExcThread(monitor, started 140204820121344)>']
[2026-01-26 22:59:36] 2026-01-26 21:59:22,058 | INFO     | all workflow threads have been joined
[2026-01-26 22:59:36] 2026-01-26 21:59:22,058 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 22:59:36] 2026-01-26 21:59:22,058 | INFO     | traces error code: 0
[2026-01-26 22:59:36] 2026-01-26 21:59:22,059 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 22:59:36] 2026-01-26 21:59:36,002 | INFO     | PID=1738255 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 22:59:36] 2026-01-26 21:59:36,002 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 22:59:36] 2026-01-26 21:59:36,002 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 22:59:36] 2026-01-26 21:59:36,002 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 22:59:36] 2026-01-26 21:59:36,002 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 22:59:36] 2026-01-26 21:59:36,002 | CRITICAL | thread 'MainThread' is not alive
[2026-01-26 22:59:36] 2026-01-26 21:59:36,002 | INFO     | [monitor] control thread has ended
[2026-01-26 22:59:36] 2026-01-26 21:59:36,042 [wrapper] ==== pilot stdout END ====
[2026-01-26 22:59:36] 2026-01-26 21:59:36,044 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 22:59:36] 2026-01-26 21:59:36,047 [wrapper] pilotpid: 1738255
[2026-01-26 22:59:36] 2026-01-26 21:59:36,049 [wrapper] Pilot exit status: 0
[2026-01-26 22:59:36] 2026-01-26 21:59:36,055 [wrapper] pandaids: 6984043516
[2026-01-26 22:59:36] 2026-01-26 21:59:36,066 [wrapper] cleanup supervisor_pilot 1747564 1738256
[2026-01-26 22:59:36] 2026-01-26 21:59:36,068 [wrapper] Test setup, not cleaning
[2026-01-26 22:59:36] 2026-01-26 21:59:36,070 [wrapper] apfmon messages muted
[2026-01-26 22:59:36] 2026-01-26 21:59:36,072 [wrapper] ==== wrapper stdout END ====
[2026-01-26 22:59:36] 2026-01-26 21:59:36,074 [wrapper] ==== wrapper stderr END ====
[2026-01-26 22:59:36]  *** Error codes and diagnostics ***
[2026-01-26 22:59:36]     "exeErrorCode": 0,
[2026-01-26 22:59:36]     "exeErrorDiag": "",
[2026-01-26 22:59:36]     "pilotErrorCode": 0,
[2026-01-26 22:59:36]     "pilotErrorDiag": "",
[2026-01-26 22:59:36]  *** Listing of results directory ***
[2026-01-26 22:59:36] total 665456
[2026-01-26 22:59:36] -rw-r--r-- 1 boinc boinc    584422 Jan 26 06:14 pilot3.tar.gz
[2026-01-26 22:59:36] -rwx------ 1 boinc boinc     36322 Jan 26 06:15 runpilot2-wrapper.sh
[2026-01-26 22:59:36] -rw-r--r-- 1 boinc boinc      5111 Jan 26 06:16 queuedata.json
[2026-01-26 22:59:36] -rw-r--r-- 1 boinc boinc       100 Jan 26 20:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 22:59:36] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 20:57 run_atlas
[2026-01-26 22:59:36] -rw-r--r-- 1 boinc boinc       105 Jan 26 20:57 job.xml
[2026-01-26 22:59:36] -rw-r--r-- 2 boinc boinc 490520719 Jan 26 20:57 EVNT.48310721._000005.pool.root.1
[2026-01-26 22:59:36] -rw-r--r-- 2 boinc boinc    597770 Jan 26 20:57 input.tar.gz
[2026-01-26 22:59:36] -rw-r--r-- 2 boinc boinc     15845 Jan 26 20:57 start_atlas.sh
[2026-01-26 22:59:36] drwxrwx--x 2 boinc boinc      4096 Jan 26 20:57 shared
[2026-01-26 22:59:36] -rw-r--r-- 1 boinc boinc         0 Jan 26 20:57 boinc_setup_complete
[2026-01-26 22:59:36] -rw-r--r-- 1 boinc boinc      6206 Jan 26 20:57 init_data.xml
[2026-01-26 22:59:36] -rw-r--r-- 1 boinc boinc         0 Jan 26 20:57 boinc_lockfile
[2026-01-26 22:59:36] -rw-r--r-- 1 boinc boinc      2530 Jan 26 20:57 pandaJob.out
[2026-01-26 22:59:36] -rw------- 1 boinc boinc   1006449 Jan 26 20:57 agis_schedconf.cvmfs.json
[2026-01-26 22:59:36] -rw------- 1 boinc boinc   1516246 Jan 26 20:57 agis_ddmendpoints.agis.ALL.json
[2026-01-26 22:59:36] -rw------- 1 boinc boinc       425 Jan 26 20:57 workernode_map.json
[2026-01-26 22:59:36] drwx------ 5 boinc boinc      4096 Jan 26 20:57 pilot3
[2026-01-26 22:59:36] -rw------- 1 boinc boinc 184287772 Jan 26 22:58 HITS.48310724._010413.pool.root.1
[2026-01-26 22:59:36] -rw-r--r-- 1 boinc boinc       530 Jan 26 22:58 boinc_task_state.xml
[2026-01-26 22:59:36] -rw------- 1 boinc boinc      1012 Jan 26 22:58 memory_monitor_summary.json
[2026-01-26 22:59:36] -rw------- 1 boinc boinc    298066 Jan 26 22:58 log.48310724._010413.job.log.tgz.1
[2026-01-26 22:59:36] -rw------- 1 boinc boinc      6288 Jan 26 22:59 heartbeat.json
[2026-01-26 22:59:36] -rw-r--r-- 1 boinc boinc        27 Jan 26 22:59 wrapper_checkpoint.txt
[2026-01-26 22:59:36] -rw-r--r-- 1 boinc boinc      8192 Jan 26 22:59 boinc_mmap_file
[2026-01-26 22:59:36] -rw------- 1 boinc boinc       817 Jan 26 22:59 pilotlog.txt
[2026-01-26 22:59:36] -rw------- 1 boinc boinc        95 Jan 26 22:59 pilot_heartbeat.json
[2026-01-26 22:59:36] -rw------- 1 boinc boinc   1048995 Jan 26 22:59 log.48310724._010413.job.log.1
[2026-01-26 22:59:36] -rw------- 1 boinc boinc       357 Jan 26 22:59 output.list
[2026-01-26 22:59:36] -rw-r--r-- 1 boinc boinc       620 Jan 26 22:59 runtime_log
[2026-01-26 22:59:36] -rw------- 1 boinc boinc   1361920 Jan 26 22:59 result.tar.gz
[2026-01-26 22:59:36] -rw-r--r-- 1 boinc boinc      8896 Jan 26 22:59 runtime_log.err
[2026-01-26 22:59:36] -rw------- 1 boinc boinc       657 Jan 26 22:59 FCqMDmo7T48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmBc2KDmBjD7xn.diag
[2026-01-26 22:59:36] -rw-r--r-- 1 boinc boinc      9822 Jan 26 22:59 stderr.txt
[2026-01-26 22:59:36] HITS file was successfully produced:
[2026-01-26 22:59:36] -rw------- 1 boinc boinc 184287772 Jan 26 22:58 shared/HITS.pool.root.1
[2026-01-26 22:59:36]  *** Contents of shared directory: ***
[2026-01-26 22:59:36] total 660936
[2026-01-26 22:59:36] -rw-r--r-- 2 boinc boinc 490520719 Jan 26 20:57 ATLAS.root_0
[2026-01-26 22:59:36] -rw-r--r-- 2 boinc boinc    597770 Jan 26 20:57 input.tar.gz
[2026-01-26 22:59:36] -rw-r--r-- 2 boinc boinc     15845 Jan 26 20:57 start_atlas.sh
[2026-01-26 22:59:36] -rw------- 1 boinc boinc 184287772 Jan 26 22:58 HITS.pool.root.1
[2026-01-26 22:59:36] -rw------- 1 boinc boinc   1361920 Jan 26 22:59 result.tar.gz
22:59:37 (1734231): run_atlas exited; CPU time 14138.688177
22:59:37 (1734231): called boinc_finish(0)

</stderr_txt>
]]>

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