Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
06:17:38 (458422): wrapper (7.7.26015): starting
06:17:38 (458422): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 06:17:38] Arguments: --nthreads 12
[2026-01-26 06:17:38] Threads: 12
[2026-01-26 06:17:38] Checking for CVMFS
[2026-01-26 06:17:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 06:17:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 06:17:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 06:17:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 06:17:38] 2.13.2.0 321610 96 48380 155545 3 188 16126469 16777217 0 130560 0 194377 99.987 5894 822 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2026-01-26 06:17:38] CVMFS is ok
[2026-01-26 06:17:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 06:17:38] Checking for apptainer binary...
[2026-01-26 06:17:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 06:17:38] Running /usr/bin/apptainer --version
[2026-01-26 06:17:38] apptainer version 1.3.0-bp160.1.36
[2026-01-26 06:17:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 06:17:38] boinc-runner
[2026-01-26 06:17:38] apptainer works
[2026-01-26 06:17:38] Set ATHENA_PROC_NUMBER=12
[2026-01-26 06:17:38] Set ATHENA_CORE_NUMBER=12
[2026-01-26 06:17:38] Starting ATLAS job with PandaID=6984043646
[2026-01-26 06:17:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 06:45:59]  *** The last 200 lines of the pilot log: ***
[2026-01-26 06:45:59] 2026-01-26 12:45:22,858 | INFO     | adding to output.list: log.48317872._002314.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/c2/log.48317872._002314.job.log.tg
[2026-01-26 06:45:59] 2026-01-26 12:45:22,858 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 06:45:59] 2026-01-26 12:45:22,858 | INFO     | summary of transferred files:
[2026-01-26 06:45:59] 2026-01-26 12:45:22,858 | INFO     |  -- lfn=log.48317872._002314.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 06:45:59] 2026-01-26 12:45:22,858 | INFO     | stage-out finished correctly
[2026-01-26 06:45:59] 2026-01-26 12:45:24,217 | INFO     | time since job start (1657s) is within the limit (349056.0s)
[2026-01-26 06:45:59] 2026-01-26 12:45:24,798 | WARNING  | process 467101 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 06:45:59] 2026-01-26 12:45:24,798 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6984043646/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 06:45:59] 2026-01-26 12:45:24,798 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6984043646/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 06:45:59] 2026-01-26 12:45:24,799 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 06:45:59] 2026-01-26 12:45:24,799 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 06:45:59] 2026-01-26 12:45:24,799 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 5690992 B
[2026-01-26 06:45:59] 2026-01-26 12:45:24,799 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16315 B
[2026-01-26 06:45:59] 2026-01-26 12:45:24,799 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-26 06:45:59] 2026-01-26 12:45:24,805 | INFO     | sufficient remaining disk space (3861029847040 B)
[2026-01-26 06:45:59] 2026-01-26 12:45:24,805 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-01-26 06:45:59] 2026-01-26 12:45:24,806 | INFO     | size of work directory /var/lib/boinc/slots/4/PanDA_Pilot-6984043646: 5969979 B (within 5033164800 B limit)
[2026-01-26 06:45:59] 2026-01-26 12:45:24,806 | INFO     | pfn file=/var/lib/boinc/slots/4/PanDA_Pilot-6984043646/HITS.48317872._002314.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-26 06:45:59] 2026-01-26 12:45:24,806 | INFO     | total size of present files: 0 B (workdir size: 5969979 B)
[2026-01-26 06:45:59] 2026-01-26 12:45:24,806 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/4/PanDA_Pilot-6984043646/HITS.48317872._002314.pool.root.1 since it does not exist
[2026-01-26 06:45:59] 2026-01-26 12:45:24,872 | INFO     | number of running child processes to parent process 467101: 1
[2026-01-26 06:45:59] 2026-01-26 12:45:24,872 | INFO     | maximum number of monitored processes: 6
[2026-01-26 06:45:59] 2026-01-26 12:45:26,223 | INFO     | time since job start (1659s) is within the limit (349056.0s)
[2026-01-26 06:45:59] 2026-01-26 12:45:26,375 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 06:45:59] 2026-01-26 12:45:27,308 | INFO     | PID=462320 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 06:45:59] 2026-01-26 12:45:27,308 | INFO     | .. there are 2 such processes running
[2026-01-26 06:45:59] 2026-01-26 12:45:27,375 | INFO     | monitor loop #130: job 0:6984043646 is in state 'finished'
[2026-01-26 06:45:59] 2026-01-26 12:45:27,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 06:45:59] 2026-01-26 12:45:27,825 | INFO     | job 6984043646 has state=finished
[2026-01-26 06:45:59] 2026-01-26 12:45:27,825 | INFO     | preparing for final server update for job 6984043646 in state='finished'
[2026-01-26 06:45:59] 2026-01-26 12:45:27,826 | INFO     | reading metadata from: /var/lib/boinc/slots/4/PanDA_Pilot-6984043646/jobReport.json
[2026-01-26 06:45:59] 2026-01-26 12:45:27,827 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/4/workernode_map.json
[2026-01-26 06:45:59] 2026-01-26 12:45:27,827 | INFO     | this job has now completed (state=finished)
[2026-01-26 06:45:59] 2026-01-26 12:45:27,827 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 06:45:59] 2026-01-26 12:45:27,827 | INFO     | log transfer has been attempted: DONE
[2026-01-26 06:45:59] 2026-01-26 12:45:27,827 | INFO     | job 6984043646 has finished - writing final server update
[2026-01-26 06:45:59] 2026-01-26 12:45:27,827 | INFO     | total number of processed events: 400 (read)
[2026-01-26 06:45:59] 2026-01-26 12:45:27,830 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6984043646/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 06:45:59] 2026-01-26 12:45:27,830 | INFO     | extracted standard info from prmon json
[2026-01-26 06:45:59] 2026-01-26 12:45:27,830 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 06:45:59] 2026-01-26 12:45:27,830 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 06:45:59] 2026-01-26 12:45:27,830 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 06:45:59] 2026-01-26 12:45:27,830 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 06:45:59] 2026-01-26 12:45:27,830 | INFO     | fitting pss+swap vs Time
[2026-01-26 06:45:59] 2026-01-26 12:45:27,830 | INFO     | sum of square deviations: 2474465.0
[2026-01-26 06:45:59] 2026-01-26 12:45:27,831 | INFO     | sum of deviations: -582710857.0
[2026-01-26 06:45:59] 2026-01-26 12:45:27,831 | INFO     | mean x: 1769430766.5
[2026-01-26 06:45:59] 2026-01-26 12:45:27,831 | INFO     | mean y: 3110537.8
[2026-01-26 06:45:59] 2026-01-26 12:45:27,831 | INFO     | intersect: 416685713989.2054
[2026-01-26 06:45:59] 2026-01-26 12:45:27,831 | INFO     | chi2: 0.028002778676010285
[2026-01-26 06:45:59] 2026-01-26 12:45:27,831 | INFO     | current memory leak: -235.49 B/s (using 20 data points, chi2=0.03)
[2026-01-26 06:45:59] 2026-01-26 12:45:27,831 | INFO     | could have reported an average CPU frequency of 3877 MHz (4 samples)
[2026-01-26 06:45:59] 2026-01-26 12:45:27,831 | INFO     | ..............................
[2026-01-26 06:45:59] 2026-01-26 12:45:27,831 | INFO     | . Timing measurements:
[2026-01-26 06:45:59] 2026-01-26 12:45:27,831 | INFO     | . get job = 0 s
[2026-01-26 06:45:59] 2026-01-26 12:45:27,831 | INFO     | . initial setup = 5 s
[2026-01-26 06:45:59] 2026-01-26 12:45:27,831 | INFO     | . payload setup = 2 s
[2026-01-26 06:45:59] 2026-01-26 12:45:27,831 | INFO     | . stage-in = 0 s
[2026-01-26 06:45:59] 2026-01-26 12:45:27,831 | INFO     | . payload execution = 1638 s
[2026-01-26 06:45:59] 2026-01-26 12:45:27,831 | INFO     | . stage-out = 0 s
[2026-01-26 06:45:59] 2026-01-26 12:45:27,831 | INFO     | . log creation = 0 s
[2026-01-26 06:45:59] 2026-01-26 12:45:27,831 | INFO     | ..............................
[2026-01-26 06:45:59] 2026-01-26 12:45:27,865 | INFO     | 
[2026-01-26 06:45:59] 2026-01-26 12:45:27,865 | INFO     | job summary report
[2026-01-26 06:45:59] 2026-01-26 12:45:27,865 | INFO     | --------------------------------------------------
[2026-01-26 06:45:59] 2026-01-26 12:45:27,865 | INFO     | PanDA job id: 6984043646
[2026-01-26 06:45:59] 2026-01-26 12:45:27,865 | INFO     | task id: 48317872
[2026-01-26 06:45:59] 2026-01-26 12:45:27,866 | INFO     | errors: (none)
[2026-01-26 06:45:59] 2026-01-26 12:45:27,866 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 06:45:59] 2026-01-26 12:45:27,866 | INFO     | pilot state: finished 
[2026-01-26 06:45:59] 2026-01-26 12:45:27,866 | INFO     | transexitcode: 0
[2026-01-26 06:45:59] 2026-01-26 12:45:27,866 | INFO     | exeerrorcode: 0
[2026-01-26 06:45:59] 2026-01-26 12:45:27,866 | INFO     | exeerrordiag: 
[2026-01-26 06:45:59] 2026-01-26 12:45:27,866 | INFO     | exitcode: 0
[2026-01-26 06:45:59] 2026-01-26 12:45:27,866 | INFO     | exitmsg: OK
[2026-01-26 06:45:59] 2026-01-26 12:45:27,866 | INFO     | cpuconsumptiontime: 17619 s
[2026-01-26 06:45:59] 2026-01-26 12:45:27,866 | INFO     | nevents: 400
[2026-01-26 06:45:59] 2026-01-26 12:45:27,866 | INFO     | neventsw: 0
[2026-01-26 06:45:59] 2026-01-26 12:45:27,866 | INFO     | pid: 467101
[2026-01-26 06:45:59] 2026-01-26 12:45:27,866 | INFO     | pgrp: 467101
[2026-01-26 06:45:59] 2026-01-26 12:45:27,866 | INFO     | corecount: 12
[2026-01-26 06:45:59] 2026-01-26 12:45:27,866 | INFO     | event service: False
[2026-01-26 06:45:59] 2026-01-26 12:45:27,866 | INFO     | sizes: {0: 2283856, 1: 2284260, 11: 2284260, 1644: 2309094, 1645: 2318092, 1648: 2318176, 1650: 2318498}
[2026-01-26 06:45:59] 2026-01-26 12:45:27,866 | INFO     | --------------------------------------------------
[2026-01-26 06:45:59] 2026-01-26 12:45:27,866 | INFO     | 
[2026-01-26 06:45:59] 2026-01-26 12:45:27,866 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-26 06:45:59] 2026-01-26 12:45:27,880 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 06:45:59] 2026-01-26 12:45:27,880 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 06:45:59] 2026-01-26 12:45:27,880 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 06:45:59] 2026-01-26 12:45:27,880 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 06:45:59] 2026-01-26 12:45:27,880 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 06:45:59] 2026-01-26 12:45:27,880 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 06:45:59] 2026-01-26 12:45:27,880 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 06:45:59] 2026-01-26 12:45:27,880 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 06:45:59] 2026-01-26 12:45:27,880 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 06:45:59] 2026-01-26 12:45:27,880 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 06:45:59] 2026-01-26 12:45:27,880 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 06:45:59] 2026-01-26 12:45:27,880 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 06:45:59] 2026-01-26 12:45:27,880 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 06:45:59] 2026-01-26 12:45:27,880 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 06:45:59] 2026-01-26 12:45:27,881 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 06:45:59] 2026-01-26 12:45:27,881 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 06:45:59] 2026-01-26 12:45:27,881 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 06:45:59] 2026-01-26 12:45:27,881 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 06:45:59] 2026-01-26 12:45:27,881 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 06:45:59] 2026-01-26 12:45:27,881 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 06:45:59] 2026-01-26 12:45:27,881 | INFO     | job 6984043646 has completed (purged errors)
[2026-01-26 06:45:59] 2026-01-26 12:45:27,881 | INFO     | overall cleanup function is called
[2026-01-26 06:45:59] 2026-01-26 12:45:28,888 | INFO     | --- collectZombieJob: --- 10, [467101]
[2026-01-26 06:45:59] 2026-01-26 12:45:28,888 | INFO     | zombie collector waiting for pid 467101
[2026-01-26 06:45:59] 2026-01-26 12:45:28,888 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 06:45:59] 2026-01-26 12:45:28,888 | INFO     | collected zombie processes
[2026-01-26 06:45:59] 2026-01-26 12:45:28,888 | INFO     | will attempt to kill all subprocesses of pid=467101
[2026-01-26 06:45:59] 2026-01-26 12:45:28,940 | INFO     | process IDs to be killed: [467101] (in reverse order)
[2026-01-26 06:45:59] 2026-01-26 12:45:28,977 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 06:45:59] 2026-01-26 12:45:28,977 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 06:45:59] 2026-01-26 12:45:28,980 | INFO     | did not find any defunct processes belonging to 467101
[2026-01-26 06:45:59] 2026-01-26 12:45:28,982 | INFO     | did not find any defunct processes belonging to 467101
[2026-01-26 06:45:59] 2026-01-26 12:45:28,982 | INFO     | ready for new job
[2026-01-26 06:45:59] 2026-01-26 12:45:28,982 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 06:45:59] 2026-01-26 12:45:28,983 | INFO     | **************************************
[2026-01-26 06:45:59] 2026-01-26 12:45:28,983 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 06:45:59] 2026-01-26 12:45:28,983 | INFO     | **************************************
[2026-01-26 06:45:59] 2026-01-26 12:45:28,983 | INFO     | 
[2026-01-26 06:45:59] 2026-01-26 12:45:28,984 | INFO     | architecture information:
[2026-01-26 06:45:59] 2026-01-26 12:45:28,985 | INFO     | executing command: cat /etc/os-release
[2026-01-26 06:45:59] 2026-01-26 12:45:28,993 | INFO     | cat /etc/os-release:
[2026-01-26 06:45:59] NAME="CentOS Linux"
[2026-01-26 06:45:59] VERSION="7 (Core)"
[2026-01-26 06:45:59] ID="centos"
[2026-01-26 06:45:59] ID_LIKE="rhel fedora"
[2026-01-26 06:45:59] VERSION_ID="7"
[2026-01-26 06:45:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 06:45:59] ANSI_COLOR="0;31"
[2026-01-26 06:45:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 06:45:59] HOME_URL="https://www.centos.org/"
[2026-01-26 06:45:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 06:45:59] 
[2026-01-26 06:45:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 06:45:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 06:45:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 06:45:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 06:45:59] 
[2026-01-26 06:45:59] 2026-01-26 12:45:28,993 | INFO     | **************************************
[2026-01-26 06:45:59] 2026-01-26 12:45:29,495 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-26 06:45:59] 2026-01-26 12:45:29,507 | INFO     | sufficient remaining disk space (3860895629312 B)
[2026-01-26 06:45:59] 2026-01-26 12:45:29,507 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 06:45:59] 2026-01-26 12:45:29,507 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 06:45:59] 2026-01-26 12:45:29,507 | INFO     | update_server=False
[2026-01-26 06:45:59] 2026-01-26 12:45:29,507 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 06:45:59] 2026-01-26 12:45:29,507 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 06:45:59] 2026-01-26 12:45:29,748 | INFO     | all data control threads have been joined
[2026-01-26 06:45:59] 2026-01-26 12:45:29,878 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 06:45:59] 2026-01-26 12:45:29,878 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 06:45:59] 2026-01-26 12:45:29,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 06:45:59] 2026-01-26 12:45:29,878 | INFO     | will abort loop
[2026-01-26 06:45:59] 2026-01-26 12:45:30,337 | INFO     | all payload control threads have been joined
[2026-01-26 06:45:59] 2026-01-26 12:45:30,512 | INFO     | [job] retrieve thread has finished
[2026-01-26 06:45:59] 2026-01-26 12:45:30,513 | INFO     | [job] queue monitor thread has finished
[2026-01-26 06:45:59] 2026-01-26 12:45:30,657 | INFO     | all job control threads have been joined
[2026-01-26 06:45:59] 2026-01-26 12:45:30,754 | INFO     | [data] control thread has finished
[2026-01-26 06:45:59] 2026-01-26 12:45:30,883 | INFO     | [job] job monitor thread has finished
[2026-01-26 06:45:59] 2026-01-26 12:45:30,901 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 06:45:59] 2026-01-26 12:45:30,941 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 06:45:59] 2026-01-26 12:45:31,342 | INFO     | [payload] control thread has finished
[2026-01-26 06:45:59] 2026-01-26 12:45:31,464 | INFO     | [job] validate thread has finished
[2026-01-26 06:45:59] 2026-01-26 12:45:31,484 | INFO     | [payload] validate_post thread has finished
[2026-01-26 06:45:59] 2026-01-26 12:45:31,547 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 06:45:59] 2026-01-26 12:45:31,562 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 06:45:59] 2026-01-26 12:45:31,662 | INFO     | [job] control thread has finished
[2026-01-26 06:45:59] 2026-01-26 12:45:31,676 | INFO     | [data] copytool_in thread has finished
[2026-01-26 06:45:59] 2026-01-26 12:45:31,893 | INFO     | [payload] failed_post thread has finished
[2026-01-26 06:45:59] 2026-01-26 12:45:32,424 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 06:45:59] 2026-01-26 12:45:32,906 | INFO     | [data] copytool_out thread has finished
[2026-01-26 06:45:59] 2026-01-26 12:45:36,429 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 06:45:59] 2026-01-26 12:45:39,630 | INFO     | job.realtimelogging is not enabled
[2026-01-26 06:45:59] 2026-01-26 12:45:40,635 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 06:45:59] 2026-01-26 12:45:49,740 | INFO     | [monitor] cgroup control has ended
[2026-01-26 06:45:59] 2026-01-26 12:45:50,348 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140142202193728)>', '<ExcThread(monitor, started 140141360314112)>']
[2026-01-26 06:45:59] 2026-01-26 12:45:55,373 | INFO     | all workflow threads have been joined
[2026-01-26 06:45:59] 2026-01-26 12:45:55,373 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 06:45:59] 2026-01-26 12:45:55,373 | INFO     | traces error code: 0
[2026-01-26 06:45:59] 2026-01-26 12:45:55,374 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 06:45:59] 2026-01-26 12:45:59,454 | INFO     | PID=462320 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 06:45:59] 2026-01-26 12:45:59,455 | INFO     | .. there are 2 such processes running
[2026-01-26 06:45:59] 2026-01-26 12:45:59,455 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 06:45:59] 2026-01-26 12:45:59,455 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 06:45:59] 2026-01-26 12:45:59,455 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 06:45:59] 2026-01-26 12:45:59,455 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 06:45:59] 2026-01-26 12:45:59,455 | INFO     | [monitor] control thread has ended
[2026-01-26 06:45:59] 2026-01-26 12:45:59,514 [wrapper] ==== pilot stdout END ====
[2026-01-26 06:45:59] 2026-01-26 12:45:59,515 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 06:45:59] 2026-01-26 12:45:59,516 [wrapper] pilotpid: 462320
[2026-01-26 06:45:59] 2026-01-26 12:45:59,517 [wrapper] Pilot exit status: 0
[2026-01-26 06:45:59] 2026-01-26 12:45:59,522 [wrapper] pandaids: 6984043646
[2026-01-26 06:45:59] 2026-01-26 12:45:59,550 [wrapper] cleanup supervisor_pilot  482477 462321
[2026-01-26 06:45:59] 2026-01-26 12:45:59,552 [wrapper] Test setup, not cleaning
[2026-01-26 06:45:59] 2026-01-26 12:45:59,554 [wrapper] apfmon messages muted
[2026-01-26 06:45:59] 2026-01-26 12:45:59,555 [wrapper] ==== wrapper stdout END ====
[2026-01-26 06:45:59] 2026-01-26 12:45:59,557 [wrapper] ==== wrapper stderr END ====
[2026-01-26 06:45:59]  *** Error codes and diagnostics ***
[2026-01-26 06:45:59]     "exeErrorCode": 0,
[2026-01-26 06:45:59]     "exeErrorDiag": "",
[2026-01-26 06:45:59]     "pilotErrorCode": 0,
[2026-01-26 06:45:59]     "pilotErrorDiag": "",
[2026-01-26 06:45:59]  *** Listing of results directory ***
[2026-01-26 06:45:59] total 674452
[2026-01-26 06:45:59] -rw-r--r--. 1 boinc boinc    584422 Jan 25 23:14 pilot3.tar.gz
[2026-01-26 06:45:59] -rwx------. 1 boinc boinc     36322 Jan 25 23:15 runpilot2-wrapper.sh
[2026-01-26 06:45:59] -rw-r--r--. 1 boinc boinc      5111 Jan 25 23:16 queuedata.json
[2026-01-26 06:45:59] -rw-r--r--. 1 boinc boinc       100 Jan 26 06:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 06:45:59] -rwxr-xr-x. 1 boinc boinc      7986 Jan 26 06:17 run_atlas
[2026-01-26 06:45:59] -rw-r--r--. 1 boinc boinc       105 Jan 26 06:17 job.xml
[2026-01-26 06:45:59] -rw-r--r--. 2 boinc boinc 494752796 Jan 26 06:17 EVNT.48317869._000043.pool.root.1
[2026-01-26 06:45:59] -rw-r--r--. 2 boinc boinc     15845 Jan 26 06:17 start_atlas.sh
[2026-01-26 06:45:59] drwxrwx--x. 1 boinc boinc        76 Jan 26 06:17 shared
[2026-01-26 06:45:59] -rw-r--r--. 2 boinc boinc    597750 Jan 26 06:17 input.tar.gz
[2026-01-26 06:45:59] -rw-r--r--. 1 boinc boinc     10047 Jan 26 06:17 init_data.xml
[2026-01-26 06:45:59] -rw-r--r--. 1 boinc boinc         0 Jan 26 06:17 boinc_setup_complete
[2026-01-26 06:45:59] -rw-r--r--. 1 boinc boinc         0 Jan 26 06:17 boinc_lockfile
[2026-01-26 06:45:59] -rw-r--r--. 1 boinc boinc      2514 Jan 26 06:17 pandaJob.out
[2026-01-26 06:45:59] -rw-------. 1 boinc boinc        63 Jan 26 06:17 setup.sh.local
[2026-01-26 06:45:59] -rw-------. 1 boinc boinc   1002189 Jan 26 06:17 agis_schedconf.cvmfs.json
[2026-01-26 06:45:59] -rw-------. 1 boinc boinc   1516246 Jan 26 06:17 agis_ddmendpoints.agis.ALL.json
[2026-01-26 06:45:59] -rw-------. 1 boinc boinc       431 Jan 26 06:17 workernode_map.json
[2026-01-26 06:45:59] drwx------. 1 boinc boinc       414 Jan 26 06:17 pilot3
[2026-01-26 06:45:59] -rw-------. 1 boinc boinc 190641205 Jan 26 06:45 HITS.48317872._002314.pool.root.1
[2026-01-26 06:45:59] -rw-r--r--. 1 boinc boinc       531 Jan 26 06:45 boinc_task_state.xml
[2026-01-26 06:45:59] -rw-------. 1 boinc boinc      1022 Jan 26 06:45 memory_monitor_summary.json
[2026-01-26 06:45:59] -rw-------. 1 boinc boinc    382931 Jan 26 06:45 log.48317872._002314.job.log.tgz.1
[2026-01-26 06:45:59] -rw-------. 1 boinc boinc      6334 Jan 26 06:45 heartbeat.json
[2026-01-26 06:45:59] -rw-r--r--. 1 boinc boinc      8192 Jan 26 06:45 boinc_mmap_file
[2026-01-26 06:45:59] -rw-r--r--. 1 boinc boinc        27 Jan 26 06:45 wrapper_checkpoint.txt
[2026-01-26 06:45:59] -rw-------. 1 boinc boinc        95 Jan 26 06:45 pilot_heartbeat.json
[2026-01-26 06:45:59] -rw-------. 1 boinc boinc       821 Jan 26 06:45 pilotlog.txt
[2026-01-26 06:45:59] -rw-------. 1 boinc boinc    278963 Jan 26 06:45 log.48317872._002314.job.log.1
[2026-01-26 06:45:59] -rw-------. 1 boinc boinc       357 Jan 26 06:45 output.list
[2026-01-26 06:45:59] -rw-r--r--. 1 boinc boinc       620 Jan 26 06:45 runtime_log
[2026-01-26 06:45:59] -rw-------. 1 boinc boinc    675840 Jan 26 06:45 result.tar.gz
[2026-01-26 06:45:59] -rw-------. 1 boinc boinc       651 Jan 26 06:45 UhuMDmu7T48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtA9KDmwuq5om.diag
[2026-01-26 06:45:59] -rw-r--r--. 1 boinc boinc      9395 Jan 26 06:45 runtime_log.err
[2026-01-26 06:45:59] -rw-r--r--. 1 boinc boinc     22291 Jan 26 06:45 stderr.txt
[2026-01-26 06:45:59] HITS file was successfully produced:
[2026-01-26 06:45:59] -rw-------. 1 boinc boinc 190641205 Jan 26 06:45 shared/HITS.pool.root.1
[2026-01-26 06:45:59]  *** Contents of shared directory: ***
[2026-01-26 06:45:59] total 670596
[2026-01-26 06:45:59] -rw-r--r--. 2 boinc boinc 494752796 Jan 26 06:17 ATLAS.root_0
[2026-01-26 06:45:59] -rw-r--r--. 2 boinc boinc     15845 Jan 26 06:17 start_atlas.sh
[2026-01-26 06:45:59] -rw-r--r--. 2 boinc boinc    597750 Jan 26 06:17 input.tar.gz
[2026-01-26 06:45:59] -rw-------. 1 boinc boinc 190641205 Jan 26 06:45 HITS.pool.root.1
[2026-01-26 06:45:59] -rw-------. 1 boinc boinc    675840 Jan 26 06:45 result.tar.gz
06:46:01 (458422): run_atlas exited; CPU time 17625.310733
06:46:01 (458422): called boinc_finish(0)

</stderr_txt>
]]>

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