Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:30:54 (17093): wrapper (7.7.26015): starting
20:30:54 (17093): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 20:30:54] Arguments: --nthreads 8
[2026-01-26 20:30:54] Threads: 8
[2026-01-26 20:30:54] Checking for CVMFS
[2026-01-26 20:30:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 20:30:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 20:30:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 20:30:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 20:30:58] 2.11.2.0 28804 40557 103944 155559 0 53 24767394 25165824 899 130560 0 6879452 99.821 5217389 2626 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-26 20:30:58] CVMFS is ok
[2026-01-26 20:30:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 20:30:58] Checking for apptainer binary...
[2026-01-26 20:30:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 20:30:58] Running /usr/bin/apptainer --version
[2026-01-26 20:30:58] apptainer version 1.3.2-1.el7
[2026-01-26 20:30:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 20:31:08] cg-vwn362.simple-grid.lan
[2026-01-26 20:31:08] apptainer works
[2026-01-26 20:31:08] Set ATHENA_PROC_NUMBER=8
[2026-01-26 20:31:08] Set ATHENA_CORE_NUMBER=8
[2026-01-26 20:31:08] Starting ATLAS job with PandaID=6984043639
[2026-01-26 20:31:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 00:50:14]  *** The last 200 lines of the pilot log: ***
[2026-01-27 00:50:14] 2026-01-26 23:49:11,192 | INFO     | total number of processed events: 400 (read)
[2026-01-27 00:50:14] 2026-01-26 23:49:11,194 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6984043639/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 00:50:14] 2026-01-26 23:49:11,195 | INFO     | extracted standard info from prmon json
[2026-01-27 00:50:14] 2026-01-26 23:49:11,195 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 00:50:14] 2026-01-26 23:49:11,195 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 00:50:14] 2026-01-26 23:49:11,196 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 00:50:14] 2026-01-26 23:49:11,196 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 00:50:14] 2026-01-26 23:49:11,201 | INFO     | fitting pss+swap vs Time
[2026-01-27 00:50:14] 2026-01-26 23:49:11,201 | INFO     | sum of square deviations: 4449281562.0
[2026-01-27 00:50:14] 2026-01-26 23:49:11,203 | INFO     | sum of deviations: 114436987956.00002
[2026-01-27 00:50:14] 2026-01-26 23:49:11,204 | INFO     | mean x: 1769463946.0
[2026-01-27 00:50:14] 2026-01-26 23:49:11,204 | INFO     | mean y: 2395026.3251028806
[2026-01-27 00:50:14] 2026-01-26 23:49:11,204 | INFO     | intersect: -45508800760.06965
[2026-01-27 00:50:14] 2026-01-26 23:49:11,204 | INFO     | chi2: 10.403958748533078
[2026-01-27 00:50:14] 2026-01-26 23:49:11,205 | INFO     | sum of square deviations: 4180243959.5
[2026-01-27 00:50:14] 2026-01-26 23:49:11,207 | INFO     | sum of deviations: 144742136571.0001
[2026-01-27 00:50:14] 2026-01-26 23:49:11,207 | INFO     | mean x: 1769463793.5
[2026-01-27 00:50:14] 2026-01-26 23:49:11,207 | INFO     | mean y: 2411972.7983193276
[2026-01-27 00:50:14] 2026-01-26 23:49:11,207 | INFO     | intersect: -61265775371.66734
[2026-01-27 00:50:14] 2026-01-26 23:49:11,211 | INFO     | chi2: 8.908309527981976
[2026-01-27 00:50:14] 2026-01-26 23:49:11,211 | INFO     | current chi2=8.908309527981976 (change=14.3757703841529 %)
[2026-01-27 00:50:14] 2026-01-26 23:49:11,211 | INFO     | right removable region: 237
[2026-01-27 00:50:14] 2026-01-26 23:49:11,211 | INFO     | sum of square deviations: 4180243959.5
[2026-01-27 00:50:14] 2026-01-26 23:49:11,213 | INFO     | sum of deviations: 29340863847.999985
[2026-01-27 00:50:14] 2026-01-26 23:49:11,214 | INFO     | mean x: 1769464098.5
[2026-01-27 00:50:14] 2026-01-26 23:49:11,214 | INFO     | mean y: 2443241.411764706
[2026-01-27 00:50:14] 2026-01-26 23:49:11,214 | INFO     | intersect: -12417311610.461143
[2026-01-27 00:50:14] 2026-01-26 23:49:11,214 | INFO     | chi2: 5.09159628073073
[2026-01-27 00:50:14] 2026-01-26 23:49:11,215 | INFO     | current chi2=5.09159628073073 (change=51.060972041544986 %)
[2026-01-27 00:50:14] 2026-01-26 23:49:11,215 | INFO     | sum of square deviations: 3922276332.0
[2026-01-27 00:50:14] 2026-01-26 23:49:11,217 | INFO     | sum of deviations: -36471380890.0
[2026-01-27 00:50:14] 2026-01-26 23:49:11,217 | INFO     | mean x: 1769464251.0
[2026-01-27 00:50:14] 2026-01-26 23:49:11,217 | INFO     | mean y: 2482098.5278969957
[2026-01-27 00:50:14] 2026-01-26 23:49:11,218 | INFO     | intersect: 16455888030.932652
[2026-01-27 00:50:14] 2026-01-26 23:49:11,218 | INFO     | chi2: 2.157426898320559
[2026-01-27 00:50:14] 2026-01-26 23:49:11,218 | INFO     | current chi2=2.157426898320559 (change=57.62769121178375 %)
[2026-01-27 00:50:14] 2026-01-26 23:49:11,219 | INFO     | sum of square deviations: 3675146117.0
[2026-01-27 00:50:14] 2026-01-26 23:49:11,221 | INFO     | sum of deviations: -52433616676.49999
[2026-01-27 00:50:14] 2026-01-26 23:49:11,221 | INFO     | mean x: 1769464403.5
[2026-01-27 00:50:14] 2026-01-26 23:49:11,221 | INFO     | mean y: 2491848.057017544
[2026-01-27 00:50:14] 2026-01-26 23:49:11,221 | INFO     | intersect: 25247588315.559105
[2026-01-27 00:50:14] 2026-01-26 23:49:11,222 | INFO     | chi2: 1.8314540975645035
[2026-01-27 00:50:14] 2026-01-26 23:49:11,222 | INFO     | current chi2=1.8314540975645035 (change=15.10933237227216 %)
[2026-01-27 00:50:14] 2026-01-26 23:49:11,222 | INFO     | left removable region: 30
[2026-01-27 00:50:14] 2026-01-26 23:49:11,222 | INFO     | sum of square deviations: 2750295288.0
[2026-01-27 00:50:14] 2026-01-26 23:49:11,224 | INFO     | sum of deviations: 1359285753.0
[2026-01-27 00:50:14] 2026-01-26 23:49:11,224 | INFO     | mean x: 1769464678.0
[2026-01-27 00:50:14] 2026-01-26 23:49:11,224 | INFO     | mean y: 2496466.231884058
[2026-01-27 00:50:14] 2026-01-26 23:49:11,224 | INFO     | intersect: -872030766.4388984
[2026-01-27 00:50:14] 2026-01-26 23:49:11,225 | INFO     | chi2: 0.0265266516530112
[2026-01-27 00:50:14] 2026-01-26 23:49:11,225 | INFO     | current memory leak: 0.49 B/s (using 207 data points, chi2=0.03)
[2026-01-27 00:50:14] 2026-01-26 23:49:11,226 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-01-27 00:50:14] 2026-01-26 23:49:11,226 | INFO     | ..............................
[2026-01-27 00:50:14] 2026-01-26 23:49:11,226 | INFO     | . Timing measurements:
[2026-01-27 00:50:14] 2026-01-26 23:49:11,226 | INFO     | . get job = 0 s
[2026-01-27 00:50:14] 2026-01-26 23:49:11,226 | INFO     | . initial setup = 124 s
[2026-01-27 00:50:14] 2026-01-26 23:49:11,226 | INFO     | . payload setup = 161 s
[2026-01-27 00:50:14] 2026-01-26 23:49:11,226 | INFO     | . stage-in = 0 s
[2026-01-27 00:50:14] 2026-01-26 23:49:11,226 | INFO     | . payload execution = 14906 s
[2026-01-27 00:50:14] 2026-01-26 23:49:11,226 | INFO     | . stage-out = 3 s
[2026-01-27 00:50:14] 2026-01-26 23:49:11,227 | INFO     | . log creation = 1 s
[2026-01-27 00:50:14] 2026-01-26 23:49:11,227 | INFO     | ..............................
[2026-01-27 00:50:14] 2026-01-26 23:49:11,514 | INFO     | 
[2026-01-27 00:50:14] 2026-01-26 23:49:11,514 | INFO     | job summary report
[2026-01-27 00:50:14] 2026-01-26 23:49:11,514 | INFO     | --------------------------------------------------
[2026-01-27 00:50:14] 2026-01-26 23:49:11,514 | INFO     | PanDA job id: 6984043639
[2026-01-27 00:50:14] 2026-01-26 23:49:11,514 | INFO     | task id: 48317872
[2026-01-27 00:50:14] 2026-01-26 23:49:11,514 | INFO     | errors: (none)
[2026-01-27 00:50:14] 2026-01-26 23:49:11,515 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 00:50:14] 2026-01-26 23:49:11,515 | INFO     | pilot state: finished 
[2026-01-27 00:50:14] 2026-01-26 23:49:11,515 | INFO     | transexitcode: 0
[2026-01-27 00:50:14] 2026-01-26 23:49:11,515 | INFO     | exeerrorcode: 0
[2026-01-27 00:50:14] 2026-01-26 23:49:11,515 | INFO     | exeerrordiag: 
[2026-01-27 00:50:14] 2026-01-26 23:49:11,515 | INFO     | exitcode: 0
[2026-01-27 00:50:14] 2026-01-26 23:49:11,515 | INFO     | exitmsg: OK
[2026-01-27 00:50:14] 2026-01-26 23:49:11,515 | INFO     | cpuconsumptiontime: 55849 s
[2026-01-27 00:50:14] 2026-01-26 23:49:11,515 | INFO     | nevents: 400
[2026-01-27 00:50:14] 2026-01-26 23:49:11,516 | INFO     | neventsw: 0
[2026-01-27 00:50:14] 2026-01-26 23:49:11,516 | INFO     | pid: 25485
[2026-01-27 00:50:14] 2026-01-26 23:49:11,516 | INFO     | pgrp: 25485
[2026-01-27 00:50:14] 2026-01-26 23:49:11,516 | INFO     | corecount: 8
[2026-01-27 00:50:14] 2026-01-26 23:49:11,516 | INFO     | event service: False
[2026-01-27 00:50:14] 2026-01-26 23:49:11,516 | INFO     | sizes: {0: 2283142, 1: 2283827, 2: 2284228, 3: 2284288, 13: 2284316, 15072: 2315444, 15076: 2324498, 15079: 2324636}
[2026-01-27 00:50:14] 2026-01-26 23:49:11,516 | INFO     | --------------------------------------------------
[2026-01-27 00:50:14] 2026-01-26 23:49:11,516 | INFO     | 
[2026-01-27 00:50:14] 2026-01-26 23:49:11,516 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-27 00:50:14] 2026-01-26 23:49:12,277 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 00:50:14] 2026-01-26 23:49:12,278 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 00:50:14] 2026-01-26 23:49:12,278 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 00:50:14] 2026-01-26 23:49:12,278 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 00:50:14] 2026-01-26 23:49:12,278 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 00:50:14] 2026-01-26 23:49:12,278 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 00:50:14] 2026-01-26 23:49:12,278 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 00:50:14] 2026-01-26 23:49:12,278 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 00:50:14] 2026-01-26 23:49:12,278 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 00:50:14] 2026-01-26 23:49:12,278 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 00:50:14] 2026-01-26 23:49:12,279 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 00:50:14] 2026-01-26 23:49:12,279 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 00:50:14] 2026-01-26 23:49:12,279 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 00:50:14] 2026-01-26 23:49:12,279 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 00:50:14] 2026-01-26 23:49:12,279 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 00:50:14] 2026-01-26 23:49:12,279 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 00:50:14] 2026-01-26 23:49:12,279 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 00:50:14] 2026-01-26 23:49:12,279 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 00:50:14] 2026-01-26 23:49:12,280 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 00:50:14] 2026-01-26 23:49:12,280 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 00:50:14] 2026-01-26 23:49:12,280 | INFO     | job 6984043639 has completed (purged errors)
[2026-01-27 00:50:14] 2026-01-26 23:49:12,280 | INFO     | overall cleanup function is called
[2026-01-27 00:50:14] 2026-01-26 23:49:13,290 | INFO     | --- collectZombieJob: --- 10, [25485]
[2026-01-27 00:50:14] 2026-01-26 23:49:13,290 | INFO     | zombie collector waiting for pid 25485
[2026-01-27 00:50:14] 2026-01-26 23:49:13,290 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 00:50:14] 2026-01-26 23:49:13,290 | INFO     | collected zombie processes
[2026-01-27 00:50:14] 2026-01-26 23:49:13,290 | INFO     | will attempt to kill all subprocesses of pid=25485
[2026-01-27 00:50:14] 2026-01-26 23:49:13,397 | INFO     | process IDs to be killed: [25485] (in reverse order)
[2026-01-27 00:50:14] 2026-01-26 23:49:13,994 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 00:50:14] 2026-01-26 23:49:13,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 00:50:14] 2026-01-26 23:49:13,997 | INFO     | did not find any defunct processes belonging to 25485
[2026-01-27 00:50:14] 2026-01-26 23:49:13,999 | INFO     | did not find any defunct processes belonging to 25485
[2026-01-27 00:50:14] 2026-01-26 23:49:13,999 | INFO     | ready for new job
[2026-01-27 00:50:14] 2026-01-26 23:49:13,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 00:50:14] 2026-01-26 23:49:14,001 | INFO     | **************************************
[2026-01-27 00:50:14] 2026-01-26 23:49:14,001 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 00:50:14] 2026-01-26 23:49:14,002 | INFO     | **************************************
[2026-01-27 00:50:14] 2026-01-26 23:49:14,002 | INFO     | 
[2026-01-27 00:50:14] 2026-01-26 23:49:14,002 | INFO     | pilot is running in a VM
[2026-01-27 00:50:14] 2026-01-26 23:49:14,002 | INFO     | architecture information:
[2026-01-27 00:50:14] 2026-01-26 23:49:14,006 | INFO     | executing command: cat /etc/os-release
[2026-01-27 00:50:14] 2026-01-26 23:49:14,240 | INFO     | cat /etc/os-release:
[2026-01-27 00:50:14] NAME="CentOS Linux"
[2026-01-27 00:50:14] VERSION="7 (Core)"
[2026-01-27 00:50:14] ID="centos"
[2026-01-27 00:50:14] ID_LIKE="rhel fedora"
[2026-01-27 00:50:14] VERSION_ID="7"
[2026-01-27 00:50:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 00:50:14] ANSI_COLOR="0;31"
[2026-01-27 00:50:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 00:50:14] HOME_URL="https://www.centos.org/"
[2026-01-27 00:50:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 00:50:14] 
[2026-01-27 00:50:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 00:50:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 00:50:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 00:50:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 00:50:14] 
[2026-01-27 00:50:14] 2026-01-26 23:49:14,240 | INFO     | **************************************
[2026-01-27 00:50:14] 2026-01-26 23:49:14,744 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-27 00:50:14] 2026-01-26 23:49:14,951 | INFO     | sufficient remaining disk space (495378759680 B)
[2026-01-27 00:50:14] 2026-01-26 23:49:14,952 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 00:50:14] 2026-01-26 23:49:14,952 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 00:50:14] 2026-01-26 23:49:14,952 | INFO     | update_server=False
[2026-01-27 00:50:14] 2026-01-26 23:49:14,952 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 00:50:14] 2026-01-26 23:49:15,333 | INFO     | all payload control threads have been joined
[2026-01-27 00:50:14] 2026-01-26 23:49:15,399 | INFO     | all data control threads have been joined
[2026-01-27 00:50:14] 2026-01-26 23:49:15,403 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 00:50:14] 2026-01-26 23:49:15,403 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 00:50:14] 2026-01-26 23:49:15,403 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 00:50:14] 2026-01-26 23:49:15,403 | INFO     | will abort loop
[2026-01-27 00:50:14] 2026-01-26 23:49:15,612 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 00:50:14] 2026-01-26 23:49:15,958 | INFO     | [job] retrieve thread has finished
[2026-01-27 00:50:14] 2026-01-26 23:49:16,099 | INFO     | [payload] failed_post thread has finished
[2026-01-27 00:50:14] 2026-01-26 23:49:16,135 | INFO     | [payload] validate_post thread has finished
[2026-01-27 00:50:14] 2026-01-26 23:49:16,286 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 00:50:14] 2026-01-26 23:49:16,339 | INFO     | [payload] control thread has finished
[2026-01-27 00:50:14] 2026-01-26 23:49:16,405 | INFO     | [data] control thread has finished
[2026-01-27 00:50:14] 2026-01-26 23:49:16,409 | INFO     | [job] job monitor thread has finished
[2026-01-27 00:50:14] 2026-01-26 23:49:16,416 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 00:50:14] 2026-01-26 23:49:16,448 | INFO     | [job] validate thread has finished
[2026-01-27 00:50:14] 2026-01-26 23:49:16,468 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 00:50:14] 2026-01-26 23:49:16,488 | INFO     | all job control threads have been joined
[2026-01-27 00:50:14] 2026-01-26 23:49:16,883 | INFO     | [data] copytool_in thread has finished
[2026-01-27 00:50:14] 2026-01-26 23:49:16,884 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 00:50:14] 2026-01-26 23:49:17,261 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 00:50:14] 2026-01-26 23:49:17,422 | INFO     | [job] queue monitor thread has finished
[2026-01-27 00:50:14] 2026-01-26 23:49:17,494 | INFO     | [job] control thread has finished
[2026-01-27 00:50:14] 2026-01-26 23:49:17,619 | INFO     | [data] copytool_out thread has finished
[2026-01-27 00:50:14] 2026-01-26 23:49:18,256 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 00:50:14] 2026-01-26 23:49:22,265 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 00:50:14] 2026-01-26 23:49:43,977 | INFO     | PID=21054 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-27 00:50:14] 2026-01-26 23:49:43,977 | INFO     | .. there are 2 such processes running
[2026-01-27 00:50:14] 2026-01-26 23:49:43,978 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 00:50:14] 2026-01-26 23:49:43,978 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 00:50:14] 2026-01-26 23:49:43,978 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 00:50:14] 2026-01-26 23:50:04,290 | INFO     | [monitor] cgroup control has ended
[2026-01-27 00:50:14] 2026-01-26 23:50:04,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140140712900416)>', '<ExcThread(monitor, started 140140127176448)>']
[2026-01-27 00:50:14] 2026-01-26 23:50:05,103 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 00:50:14] 2026-01-26 23:50:05,103 | INFO     | [monitor] control thread has ended
[2026-01-27 00:50:14] 2026-01-26 23:50:09,731 | INFO     | all workflow threads have been joined
[2026-01-27 00:50:14] 2026-01-26 23:50:09,731 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 00:50:14] 2026-01-26 23:50:09,731 | INFO     | traces error code: 0
[2026-01-27 00:50:14] 2026-01-26 23:50:09,732 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 00:50:14] 2026-01-26 23:50:10,073 [wrapper] ==== pilot stdout END ====
[2026-01-27 00:50:14] 2026-01-26 23:50:10,137 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 00:50:14] 2026-01-26 23:50:10,197 [wrapper] pilotpid: 21054
[2026-01-27 00:50:14] 2026-01-26 23:50:10,227 [wrapper] Pilot exit status: 0
[2026-01-27 00:50:14] 2026-01-26 23:50:10,784 [wrapper] pandaids: 6984043639
[2026-01-27 00:50:14] 2026-01-26 23:50:11,926 [wrapper] cleanup supervisor_pilot 31477 21055
[2026-01-27 00:50:14] 2026-01-26 23:50:12,050 [wrapper] Test setup, not cleaning
[2026-01-27 00:50:14] 2026-01-26 23:50:12,147 [wrapper] apfmon messages muted
[2026-01-27 00:50:14] 2026-01-26 23:50:12,254 [wrapper] ==== wrapper stdout END ====
[2026-01-27 00:50:14] 2026-01-26 23:50:12,325 [wrapper] ==== wrapper stderr END ====
[2026-01-27 00:50:14]  *** Error codes and diagnostics ***
[2026-01-27 00:50:14]     "exeErrorCode": 0,
[2026-01-27 00:50:14]     "exeErrorDiag": "",
[2026-01-27 00:50:14]     "pilotErrorCode": 0,
[2026-01-27 00:50:14]     "pilotErrorDiag": "",
[2026-01-27 00:50:14]  *** Listing of results directory ***
[2026-01-27 00:50:14] total 669068
[2026-01-27 00:50:14] -rw-r--r--. 1 boinc boinc    584422 Jan 26 06:14 pilot3.tar.gz
[2026-01-27 00:50:14] -rwx------. 1 boinc boinc     36322 Jan 26 06:15 runpilot2-wrapper.sh
[2026-01-27 00:50:14] -rw-r--r--. 1 boinc boinc      5111 Jan 26 06:16 queuedata.json
[2026-01-27 00:50:14] -rw-r--r--. 1 boinc boinc       100 Jan 26 20:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 00:50:14] -rwxr-xr-x. 1 boinc boinc      7986 Jan 26 20:30 run_atlas
[2026-01-27 00:50:14] -rw-r--r--. 1 boinc boinc       105 Jan 26 20:30 job.xml
[2026-01-27 00:50:14] -rw-r--r--. 2 boinc boinc 494752796 Jan 26 20:30 EVNT.48317869._000043.pool.root.1
[2026-01-27 00:50:14] -rw-r--r--. 2 boinc boinc     15845 Jan 26 20:30 start_atlas.sh
[2026-01-27 00:50:14] drwxrwx--x. 2 boinc boinc        68 Jan 26 20:30 shared
[2026-01-27 00:50:14] -rw-r--r--. 2 boinc boinc    597754 Jan 26 20:30 input.tar.gz
[2026-01-27 00:50:14] -rw-r--r--. 1 boinc boinc      6391 Jan 26 20:30 init_data.xml
[2026-01-27 00:50:14] -rw-r--r--. 1 boinc boinc         0 Jan 26 20:30 boinc_lockfile
[2026-01-27 00:50:14] -rw-r--r--. 1 boinc boinc      2514 Jan 26 20:31 pandaJob.out
[2026-01-27 00:50:14] -rw-------. 1 boinc boinc       415 Jan 26 20:37 workernode_map.json
[2026-01-27 00:50:14] -rw-------. 1 boinc boinc   1006449 Jan 26 20:37 agis_schedconf.cvmfs.json
[2026-01-27 00:50:14] drwx------. 5 boinc boinc      4096 Jan 26 20:37 pilot3
[2026-01-27 00:50:14] -rw-------. 1 boinc boinc 181198344 Jan 27 00:47 HITS.48317872._002307.pool.root.1
[2026-01-27 00:50:14] -rw-r--r--. 1 boinc boinc       532 Jan 27 00:47 boinc_task_state.xml
[2026-01-27 00:50:14] -rw-------. 1 boinc boinc        95 Jan 27 00:48 pilot_heartbeat.json
[2026-01-27 00:50:14] -rw-------. 1 boinc boinc      1012 Jan 27 00:48 memory_monitor_summary.json
[2026-01-27 00:50:14] -rw-------. 1 boinc boinc   1516246 Jan 27 00:49 agis_ddmendpoints.agis.ALL.json
[2026-01-27 00:50:14] -rw-------. 1 boinc boinc    506314 Jan 27 00:49 log.48317872._002307.job.log.tgz.1
[2026-01-27 00:50:14] -rw-------. 1 boinc boinc      6315 Jan 27 00:49 heartbeat.json
[2026-01-27 00:50:14] -rw-r--r--. 1 boinc boinc      8192 Jan 27 00:49 boinc_mmap_file
[2026-01-27 00:50:14] -rw-r--r--. 1 boinc boinc        28 Jan 27 00:49 wrapper_checkpoint.txt
[2026-01-27 00:50:14] -rw-------. 1 boinc boinc      5066 Jan 27 00:50 pilotlog.txt
[2026-01-27 00:50:14] -rw-------. 1 boinc boinc   2119083 Jan 27 00:50 log.48317872._002307.job.log.1
[2026-01-27 00:50:14] -rw-------. 1 boinc boinc       357 Jan 27 00:50 output.list
[2026-01-27 00:50:14] -rw-r--r--. 1 boinc boinc       620 Jan 27 00:50 runtime_log
[2026-01-27 00:50:14] -rw-------. 1 boinc boinc   2641920 Jan 27 00:50 result.tar.gz
[2026-01-27 00:50:14] -rw-r--r--. 1 boinc boinc      8816 Jan 27 00:50 runtime_log.err
[2026-01-27 00:50:14] -rw-------. 1 boinc boinc       656 Jan 27 00:50 8KqMDmu7T48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrA9KDmQd6dHm.diag
[2026-01-27 00:50:14] -rw-r--r--. 1 boinc boinc     20709 Jan 27 00:50 stderr.txt
[2026-01-27 00:50:14] HITS file was successfully produced:
[2026-01-27 00:50:14] -rw-------. 1 boinc boinc 181198344 Jan 27 00:47 shared/HITS.pool.root.1
[2026-01-27 00:50:14]  *** Contents of shared directory: ***
[2026-01-27 00:50:14] total 663292
[2026-01-27 00:50:14] -rw-r--r--. 2 boinc boinc 494752796 Jan 26 20:30 ATLAS.root_0
[2026-01-27 00:50:14] -rw-r--r--. 2 boinc boinc     15845 Jan 26 20:30 start_atlas.sh
[2026-01-27 00:50:14] -rw-r--r--. 2 boinc boinc    597754 Jan 26 20:30 input.tar.gz
[2026-01-27 00:50:14] -rw-------. 1 boinc boinc 181198344 Jan 27 00:47 HITS.pool.root.1
[2026-01-27 00:50:14] -rw-------. 1 boinc boinc   2641920 Jan 27 00:50 result.tar.gz
00:50:15 (17093): run_atlas exited; CPU time 56015.562218
00:50:15 (17093): called boinc_finish(0)

</stderr_txt>
]]>

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