Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:00:24 (1575199): wrapper (7.7.26015): starting
05:00:24 (1575199): wrapper: running run_atlas (--nthreads 9)
[2026-01-26 05:00:24] Arguments: --nthreads 9
[2026-01-26 05:00:24] Threads: 9
[2026-01-26 05:00:24] Checking for CVMFS
[2026-01-26 05:00:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 05:00:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 05:00:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 05:00:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 05:00:25] 2.13.3.0 11772 117696 191956 155541 3 413 21691452 32935937 18862 16776704 0 593594919 99.536 739311894 37390 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 05:00:25] CVMFS is ok
[2026-01-26 05:00:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 05:00:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 05:00:25] Further information can be found at the LHC@home message board.
[2026-01-26 05:00:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 05:00:25] Checking for apptainer binary...
[2026-01-26 05:00:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 05:00:25] Running /usr/bin/apptainer --version
[2026-01-26 05:00:25] apptainer version 1.4.5-2.el9
[2026-01-26 05:00:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 05:00:25] c7-3-28.aglt2.org
[2026-01-26 05:00:25] apptainer works
[2026-01-26 05:00:25] Set ATHENA_PROC_NUMBER=9
[2026-01-26 05:00:25] Set ATHENA_CORE_NUMBER=9
[2026-01-26 05:00:25] Starting ATLAS job with PandaID=6983773808
[2026-01-26 05:00:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 08:10:11]  *** The last 200 lines of the pilot log: ***
[2026-01-26 08:10:11] 2026-01-26 13:09:02,650 | INFO     | sum of deviations: 10274197240.821629
[2026-01-26 08:10:11] 2026-01-26 13:09:02,650 | INFO     | mean x: 1769427279.0648649
[2026-01-26 08:10:11] 2026-01-26 13:09:02,650 | INFO     | mean y: 2511966.2648648648
[2026-01-26 08:10:11] 2026-01-26 13:09:02,650 | INFO     | intersect: -9257484895.819874
[2026-01-26 08:10:11] 2026-01-26 13:09:02,651 | INFO     | chi2: 1.8219435323810251
[2026-01-26 08:10:11] 2026-01-26 13:09:02,661 | INFO     | sum of square deviations: 1808303478.200002
[2026-01-26 08:10:11] 2026-01-26 13:09:02,662 | INFO     | sum of deviations: 21564721675.666656
[2026-01-26 08:10:11] 2026-01-26 13:09:02,662 | INFO     | mean x: 1769427126.5666666
[2026-01-26 08:10:11] 2026-01-26 13:09:02,662 | INFO     | mean y: 2522826.777777778
[2026-01-26 08:10:11] 2026-01-26 13:09:02,662 | INFO     | intersect: -21098583248.496
[2026-01-26 08:10:11] 2026-01-26 13:09:02,663 | INFO     | chi2: 1.126298844503856
[2026-01-26 08:10:11] 2026-01-26 13:09:02,663 | INFO     | current chi2=1.126298844503856 (change=38.181462570799816 %)
[2026-01-26 08:10:11] 2026-01-26 13:09:02,663 | INFO     | sum of square deviations: 1661755553.177138
[2026-01-26 08:10:11] 2026-01-26 13:09:02,664 | INFO     | sum of deviations: 20887816424.051422
[2026-01-26 08:10:11] 2026-01-26 13:09:02,664 | INFO     | mean x: 1769426974.0685713
[2026-01-26 08:10:11] 2026-01-26 13:09:02,664 | INFO     | mean y: 2522122.245714286
[2026-01-26 08:10:11] 2026-01-26 13:09:02,664 | INFO     | intersect: -22238694848.2321
[2026-01-26 08:10:11] 2026-01-26 13:09:02,664 | INFO     | chi2: 1.1269315432137936
[2026-01-26 08:10:11] 2026-01-26 13:09:02,664 | INFO     | current chi2=1.1269315432137936 (change=-0.056175029657991024 %)
[2026-01-26 08:10:11] 2026-01-26 13:09:02,665 | INFO     | right removable region: 174
[2026-01-26 08:10:11] 2026-01-26 13:09:02,676 | INFO     | sum of square deviations: 1808296158.200002
[2026-01-26 08:10:11] 2026-01-26 13:09:02,677 | INFO     | sum of deviations: -11003059440.199999
[2026-01-26 08:10:11] 2026-01-26 13:09:02,677 | INFO     | mean x: 1769427431.5666666
[2026-01-26 08:10:11] 2026-01-26 13:09:02,677 | INFO     | mean y: 2532582.1
[2026-01-26 08:10:11] 2026-01-26 13:09:02,677 | INFO     | intersect: 10769084906.155272
[2026-01-26 08:10:11] 2026-01-26 13:09:02,677 | INFO     | chi2: 0.7187373930703919
[2026-01-26 08:10:11] 2026-01-26 13:09:02,677 | INFO     | current chi2=0.7187373930703919 (change=60.551060979859095 %)
[2026-01-26 08:10:11] 2026-01-26 13:09:02,678 | INFO     | sum of square deviations: 1661806413.7942834
[2026-01-26 08:10:11] 2026-01-26 13:09:02,679 | INFO     | sum of deviations: -9695624359.617142
[2026-01-26 08:10:11] 2026-01-26 13:09:02,679 | INFO     | mean x: 1769427584.0342858
[2026-01-26 08:10:11] 2026-01-26 13:09:02,679 | INFO     | mean y: 2531215.1028571427
[2026-01-26 08:10:11] 2026-01-26 13:09:02,679 | INFO     | intersect: 10326059301.127592
[2026-01-26 08:10:11] 2026-01-26 13:09:02,679 | INFO     | chi2: 0.717911632540405
[2026-01-26 08:10:11] 2026-01-26 13:09:02,679 | INFO     | current chi2=0.717911632540405 (change=0.11489043675037615 %)
[2026-01-26 08:10:11] 2026-01-26 13:09:02,679 | INFO     | left removable region: 20
[2026-01-26 08:10:11] 2026-01-26 13:09:02,679 | INFO     | sum of square deviations: 1132477174.337665
[2026-01-26 08:10:11] 2026-01-26 13:09:02,692 | INFO     | sum of deviations: 2378435027.51948
[2026-01-26 08:10:11] 2026-01-26 13:09:02,692 | INFO     | mean x: 1769427553.5324676
[2026-01-26 08:10:11] 2026-01-26 13:09:02,693 | INFO     | mean y: 2541937.896103896
[2026-01-26 08:10:11] 2026-01-26 13:09:02,693 | INFO     | intersect: -3713619912.7310977
[2026-01-26 08:10:11] 2026-01-26 13:09:02,705 | INFO     | chi2: 0.0008276580543632633
[2026-01-26 08:10:11] 2026-01-26 13:09:02,705 | INFO     | current memory leak: 2.10 B/s (using 154 data points, chi2=0.00)
[2026-01-26 08:10:11] 2026-01-26 13:09:02,706 | INFO     | could have reported an average CPU frequency of 3193 MHz (10 samples)
[2026-01-26 08:10:11] 2026-01-26 13:09:02,706 | INFO     | ..............................
[2026-01-26 08:10:11] 2026-01-26 13:09:02,706 | INFO     | . Timing measurements:
[2026-01-26 08:10:11] 2026-01-26 13:09:02,706 | INFO     | . get job = 0 s
[2026-01-26 08:10:11] 2026-01-26 13:09:02,706 | INFO     | . initial setup = 7 s
[2026-01-26 08:10:11] 2026-01-26 13:09:02,706 | INFO     | . payload setup = 6 s
[2026-01-26 08:10:11] 2026-01-26 13:09:02,706 | INFO     | . stage-in = 0 s
[2026-01-26 08:10:11] 2026-01-26 13:09:02,706 | INFO     | . payload execution = 11274 s
[2026-01-26 08:10:11] 2026-01-26 13:09:02,707 | INFO     | . stage-out = 2 s
[2026-01-26 08:10:11] 2026-01-26 13:09:02,707 | INFO     | . log creation = 0 s
[2026-01-26 08:10:11] 2026-01-26 13:09:02,707 | INFO     | ..............................
[2026-01-26 08:10:11] 2026-01-26 13:09:02,871 | INFO     | time since job start (11298s) is within the limit (349056.0s)
[2026-01-26 08:10:11] 2026-01-26 13:09:02,882 | INFO     | 
[2026-01-26 08:10:11] 2026-01-26 13:09:02,882 | INFO     | job summary report
[2026-01-26 08:10:11] 2026-01-26 13:09:02,882 | INFO     | --------------------------------------------------
[2026-01-26 08:10:11] 2026-01-26 13:09:02,882 | INFO     | PanDA job id: 6983773808
[2026-01-26 08:10:11] 2026-01-26 13:09:02,882 | INFO     | task id: 48318042
[2026-01-26 08:10:11] 2026-01-26 13:09:02,882 | INFO     | errors: (none)
[2026-01-26 08:10:11] 2026-01-26 13:09:02,882 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 08:10:11] 2026-01-26 13:09:02,882 | INFO     | pilot state: finished 
[2026-01-26 08:10:11] 2026-01-26 13:09:02,882 | INFO     | transexitcode: 0
[2026-01-26 08:10:11] 2026-01-26 13:09:02,882 | INFO     | exeerrorcode: 0
[2026-01-26 08:10:11] 2026-01-26 13:09:02,882 | INFO     | exeerrordiag: 
[2026-01-26 08:10:11] 2026-01-26 13:09:02,882 | INFO     | exitcode: 0
[2026-01-26 08:10:11] 2026-01-26 13:09:02,883 | INFO     | exitmsg: OK
[2026-01-26 08:10:11] 2026-01-26 13:09:02,883 | INFO     | cpuconsumptiontime: 36027 s
[2026-01-26 08:10:11] 2026-01-26 13:09:02,883 | INFO     | nevents: 400
[2026-01-26 08:10:11] 2026-01-26 13:09:02,883 | INFO     | neventsw: 0
[2026-01-26 08:10:11] 2026-01-26 13:09:02,883 | INFO     | pid: 1585363
[2026-01-26 08:10:11] 2026-01-26 13:09:02,883 | INFO     | pgrp: 1585363
[2026-01-26 08:10:11] 2026-01-26 13:09:02,883 | INFO     | corecount: 9
[2026-01-26 08:10:11] 2026-01-26 13:09:02,883 | INFO     | event service: False
[2026-01-26 08:10:11] 2026-01-26 13:09:02,883 | INFO     | sizes: {0: 2284249, 11: 2284249, 11283: 2313657, 11285: 2322655, 11286: 2322711, 11287: 2322905}
[2026-01-26 08:10:11] 2026-01-26 13:09:02,883 | INFO     | --------------------------------------------------
[2026-01-26 08:10:11] 2026-01-26 13:09:02,883 | INFO     | 
[2026-01-26 08:10:11] 2026-01-26 13:09:02,883 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-26 08:10:11] 2026-01-26 13:09:03,058 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 08:10:11] 2026-01-26 13:09:03,058 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 08:10:11] 2026-01-26 13:09:03,058 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 08:10:11] 2026-01-26 13:09:03,058 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 08:10:11] 2026-01-26 13:09:03,059 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 08:10:11] 2026-01-26 13:09:03,059 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 08:10:11] 2026-01-26 13:09:03,059 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 08:10:11] 2026-01-26 13:09:03,059 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 08:10:11] 2026-01-26 13:09:03,059 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 08:10:11] 2026-01-26 13:09:03,059 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 08:10:11] 2026-01-26 13:09:03,059 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 08:10:11] 2026-01-26 13:09:03,059 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 08:10:11] 2026-01-26 13:09:03,059 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 08:10:11] 2026-01-26 13:09:03,059 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 08:10:11] 2026-01-26 13:09:03,059 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 08:10:11] 2026-01-26 13:09:03,059 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 08:10:11] 2026-01-26 13:09:03,059 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 08:10:11] 2026-01-26 13:09:03,060 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 08:10:11] 2026-01-26 13:09:03,060 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 08:10:11] 2026-01-26 13:09:03,060 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 08:10:11] 2026-01-26 13:09:03,060 | INFO     | job 6983773808 has completed (purged errors)
[2026-01-26 08:10:11] 2026-01-26 13:09:03,060 | INFO     | overall cleanup function is called
[2026-01-26 08:10:11] 2026-01-26 13:09:04,090 | INFO     | --- collectZombieJob: --- 10, [1585363]
[2026-01-26 08:10:11] 2026-01-26 13:09:04,090 | INFO     | zombie collector waiting for pid 1585363
[2026-01-26 08:10:11] 2026-01-26 13:09:04,090 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 08:10:11] 2026-01-26 13:09:04,090 | INFO     | collected zombie processes
[2026-01-26 08:10:11] 2026-01-26 13:09:04,090 | INFO     | will attempt to kill all subprocesses of pid=1585363
[2026-01-26 08:10:11] 2026-01-26 13:09:04,716 | WARNING  | process 1585363 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 08:10:11] 2026-01-26 13:09:04,949 | INFO     | process IDs to be killed: [1585363] (in reverse order)
[2026-01-26 08:10:11] 2026-01-26 13:09:05,260 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 08:10:11] 2026-01-26 13:09:05,261 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/1/PanDA_Pilot-6983773808/payload.stdout) since it has not been created yet
[2026-01-26 08:10:11] 2026-01-26 13:09:05,261 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-26 08:10:11] 2026-01-26 13:09:05,277 | INFO     | sufficient remaining disk space (70395101184 B)
[2026-01-26 08:10:11] 2026-01-26 13:09:05,278 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-26 08:10:11] 2026-01-26 13:09:05,278 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6983773808/HITS.48318042._002135.pool.root.1 since it does not exist
[2026-01-26 08:10:11] 2026-01-26 13:09:05,421 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 08:10:11] 2026-01-26 13:09:05,422 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 08:10:11] 2026-01-26 13:09:05,465 | INFO     | did not find any defunct processes belonging to 1585363
[2026-01-26 08:10:11] 2026-01-26 13:09:05,565 | INFO     | did not find any defunct processes belonging to 1585363
[2026-01-26 08:10:11] 2026-01-26 13:09:05,566 | INFO     | ready for new job
[2026-01-26 08:10:11] 2026-01-26 13:09:05,580 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 08:10:11] 2026-01-26 13:09:05,582 | INFO     | **************************************
[2026-01-26 08:10:11] 2026-01-26 13:09:05,582 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 08:10:11] 2026-01-26 13:09:05,582 | INFO     | **************************************
[2026-01-26 08:10:11] 2026-01-26 13:09:05,582 | INFO     | 
[2026-01-26 08:10:11] 2026-01-26 13:09:05,594 | INFO     | architecture information:
[2026-01-26 08:10:11] 2026-01-26 13:09:05,594 | INFO     | executing command: cat /etc/os-release
[2026-01-26 08:10:11] 2026-01-26 13:09:05,659 | INFO     | cat /etc/os-release:
[2026-01-26 08:10:11] NAME="CentOS Linux"
[2026-01-26 08:10:11] VERSION="7 (Core)"
[2026-01-26 08:10:11] ID="centos"
[2026-01-26 08:10:11] ID_LIKE="rhel fedora"
[2026-01-26 08:10:11] VERSION_ID="7"
[2026-01-26 08:10:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 08:10:11] ANSI_COLOR="0;31"
[2026-01-26 08:10:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 08:10:11] HOME_URL="https://www.centos.org/"
[2026-01-26 08:10:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 08:10:11] 
[2026-01-26 08:10:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 08:10:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 08:10:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 08:10:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 08:10:11] 
[2026-01-26 08:10:11] 2026-01-26 13:09:05,659 | INFO     | **************************************
[2026-01-26 08:10:11] 2026-01-26 13:09:05,896 | INFO     | number of running child processes to parent process 1585363: 1
[2026-01-26 08:10:11] 2026-01-26 13:09:05,896 | INFO     | maximum number of monitored processes: 6
[2026-01-26 08:10:11] 2026-01-26 13:09:05,896 | INFO     | aborting job monitoring since job object (job id=6983773808) has expired
[2026-01-26 08:10:11] 2026-01-26 13:09:06,162 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-26 08:10:11] 2026-01-26 13:09:06,303 | INFO     | sufficient remaining disk space (70396149760 B)
[2026-01-26 08:10:11] 2026-01-26 13:09:06,303 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 08:10:11] 2026-01-26 13:09:06,304 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 08:10:11] 2026-01-26 13:09:06,304 | INFO     | update_server=False
[2026-01-26 08:10:11] 2026-01-26 13:09:06,304 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 08:10:11] 2026-01-26 13:09:06,310 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 08:10:11] 2026-01-26 13:09:06,310 | INFO     | will abort loop
[2026-01-26 08:10:11] 2026-01-26 13:09:06,552 | INFO     | all job control threads have been joined
[2026-01-26 08:10:11] 2026-01-26 13:09:06,756 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 08:10:11] 2026-01-26 13:09:06,896 | INFO     | all data control threads have been joined
[2026-01-26 08:10:11] 2026-01-26 13:09:06,961 | INFO     | all payload control threads have been joined
[2026-01-26 08:10:11] 2026-01-26 13:09:07,310 | INFO     | [job] retrieve thread has finished
[2026-01-26 08:10:11] 2026-01-26 13:09:07,316 | INFO     | [job] job monitor thread has finished
[2026-01-26 08:10:11] 2026-01-26 13:09:07,422 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 08:10:11] 2026-01-26 13:09:07,487 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 08:10:11] 2026-01-26 13:09:07,498 | INFO     | [job] validate thread has finished
[2026-01-26 08:10:11] 2026-01-26 13:09:07,558 | INFO     | [job] control thread has finished
[2026-01-26 08:10:11] 2026-01-26 13:09:07,736 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 08:10:11] 2026-01-26 13:09:07,896 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 08:10:11] 2026-01-26 13:09:07,902 | INFO     | [data] control thread has finished
[2026-01-26 08:10:11] 2026-01-26 13:09:07,967 | INFO     | [payload] validate_post thread has finished
[2026-01-26 08:10:11] 2026-01-26 13:09:07,967 | INFO     | [payload] control thread has finished
[2026-01-26 08:10:11] 2026-01-26 13:09:08,195 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 08:10:11] 2026-01-26 13:09:08,285 | INFO     | [data] copytool_in thread has finished
[2026-01-26 08:10:11] 2026-01-26 13:09:08,705 | INFO     | [payload] failed_post thread has finished
[2026-01-26 08:10:11] 2026-01-26 13:09:08,763 | INFO     | [data] copytool_out thread has finished
[2026-01-26 08:10:11] 2026-01-26 13:09:08,902 | INFO     | [job] queue monitor thread has finished
[2026-01-26 08:10:11] 2026-01-26 13:09:12,253 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 08:10:11] 2026-01-26 13:09:16,463 | INFO     | job.realtimelogging is not enabled
[2026-01-26 08:10:11] 2026-01-26 13:09:17,469 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 08:10:11] 2026-01-26 13:09:37,305 | INFO     | PID=1579711 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 08:10:11] 2026-01-26 13:09:37,305 | INFO     | .. there are 17 such processes running
[2026-01-26 08:10:11] 2026-01-26 13:09:37,306 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 08:10:11] 2026-01-26 13:09:37,306 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 08:10:11] 2026-01-26 13:09:37,306 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 08:10:11] 2026-01-26 13:10:03,791 | INFO     | [monitor] cgroup control has ended
[2026-01-26 08:10:11] 2026-01-26 13:10:04,797 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139981479806784)>', '<ExcThread(monitor, started 139980701693696)>']
[2026-01-26 08:10:11] 2026-01-26 13:10:05,478 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 08:10:11] 2026-01-26 13:10:05,478 | INFO     | [monitor] control thread has ended
[2026-01-26 08:10:11] 2026-01-26 13:10:09,823 | INFO     | all workflow threads have been joined
[2026-01-26 08:10:11] 2026-01-26 13:10:09,823 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 08:10:11] 2026-01-26 13:10:09,823 | INFO     | traces error code: 0
[2026-01-26 08:10:11] 2026-01-26 13:10:09,824 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 08:10:11] 2026-01-26 13:10:10,391 [wrapper] ==== pilot stdout END ====
[2026-01-26 08:10:11] 2026-01-26 13:10:10,418 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 08:10:11] 2026-01-26 13:10:10,453 [wrapper] pilotpid: 1579711
[2026-01-26 08:10:11] 2026-01-26 13:10:10,469 [wrapper] Pilot exit status: 0
[2026-01-26 08:10:11] 2026-01-26 13:10:10,558 [wrapper] pandaids: 6983773808
[2026-01-26 08:10:11] 2026-01-26 13:10:10,811 [wrapper] cleanup supervisor_pilot 2086409 1579712
[2026-01-26 08:10:11] 2026-01-26 13:10:10,829 [wrapper] Test setup, not cleaning
[2026-01-26 08:10:11] 2026-01-26 13:10:10,844 [wrapper] apfmon messages muted
[2026-01-26 08:10:11] 2026-01-26 13:10:10,855 [wrapper] ==== wrapper stdout END ====
[2026-01-26 08:10:11] 2026-01-26 13:10:10,873 [wrapper] ==== wrapper stderr END ====
[2026-01-26 08:10:11]  *** Error codes and diagnostics ***
[2026-01-26 08:10:11]     "exeErrorCode": 0,
[2026-01-26 08:10:11]     "exeErrorDiag": "",
[2026-01-26 08:10:11]     "pilotErrorCode": 0,
[2026-01-26 08:10:11]     "pilotErrorDiag": "",
[2026-01-26 08:10:11]  *** Listing of results directory ***
[2026-01-26 08:10:11] total 676124
[2026-01-26 08:10:11] -rw-r--r--. 1 boincer umatlas    584422 Jan 26 00:14 pilot3.tar.gz
[2026-01-26 08:10:11] -rwx------. 1 boincer umatlas     36322 Jan 26 00:15 runpilot2-wrapper.sh
[2026-01-26 08:10:11] -rw-r--r--. 1 boincer umatlas      5111 Jan 26 00:15 queuedata.json
[2026-01-26 08:10:11] -rw-r--r--. 1 boincer umatlas       100 Jan 26 05:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 08:10:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 05:00 run_atlas
[2026-01-26 08:10:11] -rw-r--r--. 1 boincer umatlas       105 Jan 26 05:00 job.xml
[2026-01-26 08:10:11] -rw-r--r--. 2 boincer umatlas 502451226 Jan 26 05:00 EVNT.48318040._000043.pool.root.1
[2026-01-26 08:10:11] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 05:00 start_atlas.sh
[2026-01-26 08:10:11] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 05:00 shared
[2026-01-26 08:10:11] -rw-r--r--. 2 boincer umatlas    597766 Jan 26 05:00 input.tar.gz
[2026-01-26 08:10:11] -rw-r--r--. 1 boincer umatlas         0 Jan 26 05:00 boinc_lockfile
[2026-01-26 08:10:11] -rw-r--r--. 1 boincer umatlas      2532 Jan 26 05:00 pandaJob.out
[2026-01-26 08:10:11] -rw-------. 1 boincer umatlas        57 Jan 26 05:00 setup.sh.local
[2026-01-26 08:10:11] -rw-------. 1 boincer umatlas   1004246 Jan 26 05:00 agis_schedconf.cvmfs.json
[2026-01-26 08:10:11] -rw-------. 1 boincer umatlas       428 Jan 26 05:00 workernode_map.json
[2026-01-26 08:10:11] drwx------. 5 boincer umatlas      4096 Jan 26 05:00 pilot3
[2026-01-26 08:10:11] -rw-r--r--. 1 boincer umatlas      6946 Jan 26 08:00 init_data.xml
[2026-01-26 08:10:11] -rw-r--r--. 1 boincer umatlas       532 Jan 26 08:07 boinc_task_state.xml
[2026-01-26 08:10:11] -rw-------. 1 boincer umatlas 182076679 Jan 26 08:07 HITS.48318042._002135.pool.root.1
[2026-01-26 08:10:11] -rw-------. 1 boincer umatlas        95 Jan 26 08:08 pilot_heartbeat.json
[2026-01-26 08:10:11] -rw-------. 1 boincer umatlas      1043 Jan 26 08:08 memory_monitor_summary.json
[2026-01-26 08:10:11] -rw-------. 1 boincer umatlas   1516246 Jan 26 08:09 agis_ddmendpoints.agis.ALL.json
[2026-01-26 08:10:11] -rw-------. 1 boincer umatlas    440253 Jan 26 08:09 log.48318042._002135.job.log.tgz.1
[2026-01-26 08:10:11] -rw-------. 1 boincer umatlas      6344 Jan 26 08:09 heartbeat.json
[2026-01-26 08:10:11] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 08:10 boinc_mmap_file
[2026-01-26 08:10:11] -rw-r--r--. 1 boincer umatlas        28 Jan 26 08:10 wrapper_checkpoint.txt
[2026-01-26 08:10:11] -rw-------. 1 boincer umatlas      5182 Jan 26 08:10 pilotlog.txt
[2026-01-26 08:10:11] -rw-------. 1 boincer umatlas   1495123 Jan 26 08:10 log.48318042._002135.job.log.1
[2026-01-26 08:10:11] -rw-------. 1 boincer umatlas       357 Jan 26 08:10 output.list
[2026-01-26 08:10:11] -rw-r--r--. 1 boincer umatlas       620 Jan 26 08:10 runtime_log
[2026-01-26 08:10:11] -rw-------. 1 boincer umatlas   1955840 Jan 26 08:10 result.tar.gz
[2026-01-26 08:10:11] -rw-r--r--. 1 boincer umatlas      9337 Jan 26 08:10 runtime_log.err
[2026-01-26 08:10:11] -rw-------. 1 boincer umatlas       657 Jan 26 08:10 4ZfMDmU7T48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXa2KDmgvayVn.diag
[2026-01-26 08:10:11] -rw-r--r--. 1 boincer umatlas     21418 Jan 26 08:10 stderr.txt
[2026-01-26 08:10:11] HITS file was successfully produced:
[2026-01-26 08:10:11] -rw-------. 1 boincer umatlas 182076679 Jan 26 08:07 shared/HITS.pool.root.1
[2026-01-26 08:10:11]  *** Contents of shared directory: ***
[2026-01-26 08:10:11] total 671008
[2026-01-26 08:10:11] -rw-r--r--. 2 boincer umatlas 502451226 Jan 26 05:00 ATLAS.root_0
[2026-01-26 08:10:11] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 05:00 start_atlas.sh
[2026-01-26 08:10:11] -rw-r--r--. 2 boincer umatlas    597766 Jan 26 05:00 input.tar.gz
[2026-01-26 08:10:11] -rw-------. 1 boincer umatlas 182076679 Jan 26 08:07 HITS.pool.root.1
[2026-01-26 08:10:11] -rw-------. 1 boincer umatlas   1955840 Jan 26 08:10 result.tar.gz
08:10:13 (1575199): run_atlas exited; CPU time 36448.242441
08:10:13 (1575199): called boinc_finish(0)

</stderr_txt>
]]>

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