Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:10:18 (1240600): wrapper (7.7.26015): starting
16:10:18 (1240600): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 16:10:18] Arguments: --nthreads 4
[2026-01-26 16:10:18] Threads: 4
[2026-01-26 16:10:18] Checking for CVMFS
[2026-01-26 16:10:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 16:10:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 16:10:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 16:10:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 16:10:19] 2.13.3.0 3897 9075 62644 155566 3 188 4844227 6144001 2769 130560 1 16759028 99.996 282293 723 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-26 16:10:19] CVMFS is ok
[2026-01-26 16:10:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 16:10:19] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-26 16:10:19] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-26 16:10:19] Further information can be found at the LHC@home message board.
[2026-01-26 16:10:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 16:10:19] Checking for apptainer binary...
[2026-01-26 16:10:19] apptainer is not installed, using version from CVMFS
[2026-01-26 16:10:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 16:10:20] ubuntu-vm
[2026-01-26 16:10:20] apptainer works
[2026-01-26 16:10:20] Set ATHENA_PROC_NUMBER=4
[2026-01-26 16:10:20] Set ATHENA_CORE_NUMBER=4
[2026-01-26 16:10:20] Starting ATLAS job with PandaID=6983466654
[2026-01-26 16:10:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/mnt/boinc/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 18:29:01]  *** The last 200 lines of the pilot log: ***
[2026-01-26 18:29:01] 2026-01-27 02:28:14,020 | INFO     | intersect: -7129055609.788955
[2026-01-26 18:29:01] 2026-01-27 02:28:14,020 | INFO     | chi2: 0.0011051185115478878
[2026-01-26 18:29:01] 2026-01-27 02:28:14,020 | INFO     | current chi2=0.0011051185115478878 (change=99.9135859818894 %)
[2026-01-26 18:29:01] 2026-01-27 02:28:14,020 | INFO     | sum of square deviations: 605592750.0
[2026-01-26 18:29:01] 2026-01-27 02:28:14,020 | INFO     | sum of deviations: 1895998827.9999998
[2026-01-26 18:29:01] 2026-01-27 02:28:14,021 | INFO     | mean x: 1769477056.0
[2026-01-26 18:29:01] 2026-01-27 02:28:14,021 | INFO     | mean y: 2356063.176
[2026-01-26 18:29:01] 2026-01-27 02:28:14,021 | INFO     | intersect: -5537549136.0670395
[2026-01-26 18:29:01] 2026-01-27 02:28:14,021 | INFO     | chi2: 0.0002820304976113466
[2026-01-26 18:29:01] 2026-01-27 02:28:14,021 | INFO     | current chi2=0.0002820304976113466 (change=74.47961511238105 %)
[2026-01-26 18:29:01] 2026-01-27 02:28:14,021 | INFO     | sum of square deviations: 535786790.0
[2026-01-26 18:29:01] 2026-01-27 02:28:14,021 | INFO     | sum of deviations: 1500473973.9999998
[2026-01-26 18:29:01] 2026-01-27 02:28:14,021 | INFO     | mean x: 1769477208.5
[2026-01-26 18:29:01] 2026-01-27 02:28:14,021 | INFO     | mean y: 2356924.316666667
[2026-01-26 18:29:01] 2026-01-27 02:28:14,021 | INFO     | intersect: -4953074132.392329
[2026-01-26 18:29:01] 2026-01-27 02:28:14,021 | INFO     | chi2: 0.00017829949085601947
[2026-01-26 18:29:01] 2026-01-27 02:28:14,021 | INFO     | current chi2=0.00017829949085601947 (change=36.78006727424001 %)
[2026-01-26 18:29:01] 2026-01-27 02:28:14,021 | INFO     | sum of square deviations: 471562330.0
[2026-01-26 18:29:01] 2026-01-27 02:28:14,022 | INFO     | sum of deviations: 1248708552.0
[2026-01-26 18:29:01] 2026-01-27 02:28:14,022 | INFO     | mean x: 1769477361.0
[2026-01-26 18:29:01] 2026-01-27 02:28:14,022 | INFO     | mean y: 2357517.0347826085
[2026-01-26 18:29:01] 2026-01-27 02:28:14,022 | INFO     | intersect: -4683261695.278235
[2026-01-26 18:29:01] 2026-01-27 02:28:14,022 | INFO     | chi2: 0.00013299699716022318
[2026-01-26 18:29:01] 2026-01-27 02:28:14,022 | INFO     | current chi2=0.00013299699716022318 (change=25.408089208947317 %)
[2026-01-26 18:29:01] 2026-01-27 02:28:14,022 | INFO     | sum of square deviations: 412686807.5
[2026-01-26 18:29:01] 2026-01-27 02:28:14,022 | INFO     | sum of deviations: 1097410648.4999998
[2026-01-26 18:29:01] 2026-01-27 02:28:14,022 | INFO     | mean x: 1769477513.5
[2026-01-26 18:29:01] 2026-01-27 02:28:14,022 | INFO     | mean y: 2357911.2636363637
[2026-01-26 18:29:01] 2026-01-27 02:28:14,023 | INFO     | intersect: -4703010494.767133
[2026-01-26 18:29:01] 2026-01-27 02:28:14,023 | INFO     | chi2: 0.00012714352836355413
[2026-01-26 18:29:01] 2026-01-27 02:28:14,023 | INFO     | current chi2=0.00012714352836355413 (change=4.401203727643036 %)
[2026-01-26 18:29:01] 2026-01-27 02:28:14,023 | INFO     | left removable region: 50
[2026-01-26 18:29:01] 2026-01-27 02:28:14,023 | INFO     | sum of square deviations: 152858680.0
[2026-01-26 18:29:01] 2026-01-27 02:28:14,023 | INFO     | sum of deviations: 228705286.99999997
[2026-01-26 18:29:01] 2026-01-27 02:28:14,023 | INFO     | mean x: 1769478093.0
[2026-01-26 18:29:01] 2026-01-27 02:28:14,023 | INFO     | mean y: 2360158.0632911394
[2026-01-26 18:29:01] 2026-01-27 02:28:14,023 | INFO     | intersect: -2645111317.5492
[2026-01-26 18:29:01] 2026-01-27 02:28:14,023 | INFO     | chi2: 5.679536381352307e-05
[2026-01-26 18:29:01] 2026-01-27 02:28:14,023 | INFO     | current memory leak: 1.50 B/s (using 79 data points, chi2=0.00)
[2026-01-26 18:29:01] 2026-01-27 02:28:14,023 | INFO     | could have reported an average CPU frequency of 4199 MHz (8 samples)
[2026-01-26 18:29:01] 2026-01-27 02:28:14,024 | INFO     | ..............................
[2026-01-26 18:29:01] 2026-01-27 02:28:14,024 | INFO     | . Timing measurements:
[2026-01-26 18:29:01] 2026-01-27 02:28:14,024 | INFO     | . get job = 0 s
[2026-01-26 18:29:01] 2026-01-27 02:28:14,024 | INFO     | . initial setup = 8 s
[2026-01-26 18:29:01] 2026-01-27 02:28:14,024 | INFO     | . payload setup = 6 s
[2026-01-26 18:29:01] 2026-01-27 02:28:14,024 | INFO     | . stage-in = 0 s
[2026-01-26 18:29:01] 2026-01-27 02:28:14,024 | INFO     | . payload execution = 8225 s
[2026-01-26 18:29:01] 2026-01-27 02:28:14,024 | INFO     | . stage-out = 0 s
[2026-01-26 18:29:01] 2026-01-27 02:28:14,024 | INFO     | . log creation = 0 s
[2026-01-26 18:29:01] 2026-01-27 02:28:14,024 | INFO     | ..............................
[2026-01-26 18:29:01] 2026-01-27 02:28:14,064 | INFO     | 
[2026-01-26 18:29:01] 2026-01-27 02:28:14,064 | INFO     | job summary report
[2026-01-26 18:29:01] 2026-01-27 02:28:14,064 | INFO     | --------------------------------------------------
[2026-01-26 18:29:01] 2026-01-27 02:28:14,064 | INFO     | PanDA job id: 6983466654
[2026-01-26 18:29:01] 2026-01-27 02:28:14,064 | INFO     | task id: 48329654
[2026-01-26 18:29:01] 2026-01-27 02:28:14,064 | INFO     | errors: (none)
[2026-01-26 18:29:01] 2026-01-27 02:28:14,064 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 18:29:01] 2026-01-27 02:28:14,064 | INFO     | pilot state: finished 
[2026-01-26 18:29:01] 2026-01-27 02:28:14,064 | INFO     | transexitcode: 0
[2026-01-26 18:29:01] 2026-01-27 02:28:14,064 | INFO     | exeerrorcode: 0
[2026-01-26 18:29:01] 2026-01-27 02:28:14,064 | INFO     | exeerrordiag: 
[2026-01-26 18:29:01] 2026-01-27 02:28:14,065 | INFO     | exitcode: 0
[2026-01-26 18:29:01] 2026-01-27 02:28:14,065 | INFO     | exitmsg: OK
[2026-01-26 18:29:01] 2026-01-27 02:28:14,065 | INFO     | cpuconsumptiontime: 31999 s
[2026-01-26 18:29:01] 2026-01-27 02:28:14,065 | INFO     | nevents: 400
[2026-01-26 18:29:01] 2026-01-27 02:28:14,065 | INFO     | neventsw: 0
[2026-01-26 18:29:01] 2026-01-27 02:28:14,065 | INFO     | pid: 1249192
[2026-01-26 18:29:01] 2026-01-27 02:28:14,065 | INFO     | pgrp: 1249192
[2026-01-26 18:29:01] 2026-01-27 02:28:14,065 | INFO     | corecount: 4
[2026-01-26 18:29:01] 2026-01-27 02:28:14,065 | INFO     | event service: False
[2026-01-26 18:29:01] 2026-01-27 02:28:14,065 | INFO     | sizes: {0: 2284368, 11: 2284368, 8235: 2312168, 8236: 2321184, 8238: 2321240, 8241: 2321434}
[2026-01-26 18:29:01] 2026-01-27 02:28:14,065 | INFO     | --------------------------------------------------
[2026-01-26 18:29:01] 2026-01-27 02:28:14,065 | INFO     | 
[2026-01-26 18:29:01] 2026-01-27 02:28:14,065 | INFO     | executing command: ls -lF /mnt/boinc/boinc-client/slots/2
[2026-01-26 18:29:01] 2026-01-27 02:28:14,081 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 18:29:01] 2026-01-27 02:28:14,081 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 18:29:01] 2026-01-27 02:28:14,081 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 18:29:01] 2026-01-27 02:28:14,081 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 18:29:01] 2026-01-27 02:28:14,081 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 18:29:01] 2026-01-27 02:28:14,082 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 18:29:01] 2026-01-27 02:28:14,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 18:29:01] 2026-01-27 02:28:14,082 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 18:29:01] 2026-01-27 02:28:14,082 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 18:29:01] 2026-01-27 02:28:14,082 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 18:29:01] 2026-01-27 02:28:14,082 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 18:29:01] 2026-01-27 02:28:14,082 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 18:29:01] 2026-01-27 02:28:14,082 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 18:29:01] 2026-01-27 02:28:14,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 18:29:01] 2026-01-27 02:28:14,082 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 18:29:01] 2026-01-27 02:28:14,082 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 18:29:01] 2026-01-27 02:28:14,082 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 18:29:01] 2026-01-27 02:28:14,082 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 18:29:01] 2026-01-27 02:28:14,082 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 18:29:01] 2026-01-27 02:28:14,082 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 18:29:01] 2026-01-27 02:28:14,082 | INFO     | job 6983466654 has completed (purged errors)
[2026-01-26 18:29:01] 2026-01-27 02:28:14,082 | INFO     | overall cleanup function is called
[2026-01-26 18:29:01] 2026-01-27 02:28:15,087 | INFO     | --- collectZombieJob: --- 10, [1249192]
[2026-01-26 18:29:01] 2026-01-27 02:28:15,087 | INFO     | zombie collector waiting for pid 1249192
[2026-01-26 18:29:01] 2026-01-27 02:28:15,087 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 18:29:01] 2026-01-27 02:28:15,087 | INFO     | collected zombie processes
[2026-01-26 18:29:01] 2026-01-27 02:28:15,087 | INFO     | will attempt to kill all subprocesses of pid=1249192
[2026-01-26 18:29:01] 2026-01-27 02:28:15,163 | INFO     | process IDs to be killed: [1249192] (in reverse order)
[2026-01-26 18:29:01] 2026-01-27 02:28:15,210 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 18:29:01] 2026-01-27 02:28:15,210 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 18:29:01] 2026-01-27 02:28:15,212 | INFO     | did not find any defunct processes belonging to 1249192
[2026-01-26 18:29:01] 2026-01-27 02:28:15,214 | INFO     | did not find any defunct processes belonging to 1249192
[2026-01-26 18:29:01] 2026-01-27 02:28:15,215 | INFO     | ready for new job
[2026-01-26 18:29:01] 2026-01-27 02:28:15,215 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 18:29:01] 2026-01-27 02:28:15,216 | INFO     | **************************************
[2026-01-26 18:29:01] 2026-01-27 02:28:15,216 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 18:29:01] 2026-01-27 02:28:15,216 | INFO     | **************************************
[2026-01-26 18:29:01] 2026-01-27 02:28:15,216 | INFO     | 
[2026-01-26 18:29:01] 2026-01-27 02:28:15,216 | INFO     | pilot is running in a VM
[2026-01-26 18:29:01] 2026-01-27 02:28:15,217 | INFO     | architecture information:
[2026-01-26 18:29:01] 2026-01-27 02:28:15,217 | INFO     | executing command: cat /etc/os-release
[2026-01-26 18:29:01] 2026-01-27 02:28:15,227 | INFO     | cat /etc/os-release:
[2026-01-26 18:29:01] NAME="CentOS Linux"
[2026-01-26 18:29:01] VERSION="7 (Core)"
[2026-01-26 18:29:01] ID="centos"
[2026-01-26 18:29:01] ID_LIKE="rhel fedora"
[2026-01-26 18:29:01] VERSION_ID="7"
[2026-01-26 18:29:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 18:29:01] ANSI_COLOR="0;31"
[2026-01-26 18:29:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 18:29:01] HOME_URL="https://www.centos.org/"
[2026-01-26 18:29:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 18:29:01] 
[2026-01-26 18:29:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 18:29:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 18:29:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 18:29:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 18:29:01] 
[2026-01-26 18:29:01] 2026-01-27 02:28:15,227 | INFO     | **************************************
[2026-01-26 18:29:01] 2026-01-27 02:28:15,359 | WARNING  | process 1249192 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 18:29:01] 2026-01-27 02:28:15,408 | INFO     | using path: /mnt/boinc/boinc-client/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 18:29:01] 2026-01-27 02:28:15,409 | INFO     | using path: /mnt/boinc/boinc-client/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 18:29:01] 2026-01-27 02:28:15,409 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 18:29:01] 2026-01-27 02:28:15,409 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 18:29:01] 2026-01-27 02:28:15,410 | INFO     | skipping file size check of payload stdout file (/mnt/boinc/boinc-client/slots/2/PanDA_Pilot-6983466654/payload.stdout) since it has not been created yet
[2026-01-26 18:29:01] 2026-01-27 02:28:15,410 | INFO     | executing command: df -mP /mnt/boinc/boinc-client/slots/2
[2026-01-26 18:29:01] 2026-01-27 02:28:15,423 | INFO     | sufficient remaining disk space (43615518720 B)
[2026-01-26 18:29:01] 2026-01-27 02:28:15,423 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-26 18:29:01] 2026-01-27 02:28:15,423 | INFO     | output file size check: skipping output file /mnt/boinc/boinc-client/slots/2/PanDA_Pilot-6983466654/HITS.48329654._000039.pool.root.1 since it does not exist
[2026-01-26 18:29:01] 2026-01-27 02:28:15,498 | INFO     | number of running child processes to parent process 1249192: 1
[2026-01-26 18:29:01] 2026-01-27 02:28:15,498 | INFO     | maximum number of monitored processes: 6
[2026-01-26 18:29:01] 2026-01-27 02:28:15,498 | INFO     | aborting job monitoring since job object (job id=6983466654) has expired
[2026-01-26 18:29:01] 2026-01-27 02:28:15,730 | INFO     | executing command: df -mP /mnt/boinc/boinc-client/slots/2
[2026-01-26 18:29:01] 2026-01-27 02:28:15,743 | INFO     | sufficient remaining disk space (43615518720 B)
[2026-01-26 18:29:01] 2026-01-27 02:28:15,744 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 18:29:01] 2026-01-27 02:28:15,744 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 18:29:01] 2026-01-27 02:28:15,744 | INFO     | update_server=False
[2026-01-26 18:29:01] 2026-01-27 02:28:15,744 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 18:29:01] 2026-01-27 02:28:15,744 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 18:29:01] 2026-01-27 02:28:15,744 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 18:29:01] 2026-01-27 02:28:15,744 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 18:29:01] 2026-01-27 02:28:15,744 | INFO     | will abort loop
[2026-01-26 18:29:01] 2026-01-27 02:28:16,368 | INFO     | all data control threads have been joined
[2026-01-26 18:29:01] 2026-01-27 02:28:16,426 | INFO     | all payload control threads have been joined
[2026-01-26 18:29:01] 2026-01-27 02:28:16,749 | INFO     | [job] retrieve thread has finished
[2026-01-26 18:29:01] 2026-01-27 02:28:16,750 | INFO     | [job] queue monitor thread has finished
[2026-01-26 18:29:01] 2026-01-27 02:28:16,750 | INFO     | [job] job monitor thread has finished
[2026-01-26 18:29:01] 2026-01-27 02:28:16,826 | INFO     | [job] validate thread has finished
[2026-01-26 18:29:01] 2026-01-27 02:28:16,841 | INFO     | all job control threads have been joined
[2026-01-26 18:29:01] 2026-01-27 02:28:16,896 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 18:29:01] 2026-01-27 02:28:16,967 | INFO     | [data] copytool_in thread has finished
[2026-01-26 18:29:01] 2026-01-27 02:28:17,026 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 18:29:01] 2026-01-27 02:28:17,258 | INFO     | [payload] failed_post thread has finished
[2026-01-26 18:29:01] 2026-01-27 02:28:17,363 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 18:29:01] 2026-01-27 02:28:17,374 | INFO     | [data] control thread has finished
[2026-01-26 18:29:01] 2026-01-27 02:28:17,427 | INFO     | [payload] control thread has finished
[2026-01-26 18:29:01] 2026-01-27 02:28:17,750 | INFO     | [data] copytool_out thread has finished
[2026-01-26 18:29:01] 2026-01-27 02:28:17,847 | INFO     | [job] control thread has finished
[2026-01-26 18:29:01] 2026-01-27 02:28:17,924 | INFO     | [payload] validate_post thread has finished
[2026-01-26 18:29:01] 2026-01-27 02:28:18,214 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 18:29:01] 2026-01-27 02:28:21,369 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 18:29:01] 2026-01-27 02:28:25,925 | INFO     | job.realtimelogging is not enabled
[2026-01-26 18:29:01] 2026-01-27 02:28:26,931 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 18:29:01] 2026-01-27 02:28:45,340 | INFO     | PID=1244706 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 18:29:01] 2026-01-27 02:28:45,340 | INFO     | .. there are 4 such processes running
[2026-01-26 18:29:01] 2026-01-27 02:28:45,340 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 18:29:01] 2026-01-27 02:28:45,340 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 18:29:01] 2026-01-27 02:28:45,340 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 18:29:01] 2026-01-27 02:28:55,233 | INFO     | [monitor] cgroup control has ended
[2026-01-26 18:29:01] 2026-01-27 02:28:56,599 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125203854104384)>', '<ExcThread(monitor, started 125203287877376)>']
[2026-01-26 18:29:01] 2026-01-27 02:28:57,387 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 18:29:01] 2026-01-27 02:28:57,387 | INFO     | [monitor] control thread has ended
[2026-01-26 18:29:01] 2026-01-27 02:29:01,616 | INFO     | all workflow threads have been joined
[2026-01-26 18:29:01] 2026-01-27 02:29:01,616 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 18:29:01] 2026-01-27 02:29:01,616 | INFO     | traces error code: 0
[2026-01-26 18:29:01] 2026-01-27 02:29:01,617 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 18:29:01] 2026-01-27 02:29:01,675 [wrapper] ==== pilot stdout END ====
[2026-01-26 18:29:01] 2026-01-27 02:29:01,677 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 18:29:01] 2026-01-27 02:29:01,679 [wrapper] pilotpid: 1244706
[2026-01-26 18:29:01] 2026-01-27 02:29:01,681 [wrapper] Pilot exit status: 0
[2026-01-26 18:29:01] 2026-01-27 02:29:01,688 [wrapper] pandaids: 6983466654
[2026-01-26 18:29:01] 2026-01-27 02:29:01,715 [wrapper] cleanup supervisor_pilot 1320534 1244707
[2026-01-26 18:29:01] 2026-01-27 02:29:01,717 [wrapper] Test setup, not cleaning
[2026-01-26 18:29:01] 2026-01-27 02:29:01,719 [wrapper] apfmon messages muted
[2026-01-26 18:29:01] 2026-01-27 02:29:01,722 [wrapper] ==== wrapper stdout END ====
[2026-01-26 18:29:01] 2026-01-27 02:29:01,724 [wrapper] ==== wrapper stderr END ====
[2026-01-26 18:29:01]  *** Error codes and diagnostics ***
[2026-01-26 18:29:01]     "exeErrorCode": 0,
[2026-01-26 18:29:01]     "exeErrorDiag": "",
[2026-01-26 18:29:01]     "pilotErrorCode": 0,
[2026-01-26 18:29:01]     "pilotErrorDiag": "",
[2026-01-26 18:29:01]  *** Listing of results directory ***
[2026-01-26 18:29:01] total 467056
[2026-01-26 18:29:01] -rwx------ 1 boinc boinc     36322 Jan 25 14:58 runpilot2-wrapper.sh
[2026-01-26 18:29:01] -rw-r--r-- 1 boinc boinc      5111 Jan 25 14:58 queuedata.json
[2026-01-26 18:29:01] -rw-r--r-- 1 boinc boinc    584422 Jan 25 15:00 pilot3.tar.gz
[2026-01-26 18:29:01] -rw-r--r-- 1 boinc boinc       100 Jan 26 16:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 18:29:01] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 16:10 run_atlas
[2026-01-26 18:29:01] -rw-r--r-- 1 boinc boinc       105 Jan 26 16:10 job.xml
[2026-01-26 18:29:01] -rw-r--r-- 2 boinc boinc 271534624 Jan 26 16:10 EVNT.48329652._000002.pool.root.1
[2026-01-26 18:29:01] -rw-r--r-- 2 boinc boinc    597770 Jan 26 16:10 input.tar.gz
[2026-01-26 18:29:01] -rw-r--r-- 2 boinc boinc     15845 Jan 26 16:10 start_atlas.sh
[2026-01-26 18:29:01] drwxrwx--x 2 boinc boinc      4096 Jan 26 16:10 shared
[2026-01-26 18:29:01] -rw-r--r-- 1 boinc boinc         0 Jan 26 16:10 boinc_setup_complete
[2026-01-26 18:29:01] -rw-r--r-- 1 boinc boinc      6869 Jan 26 16:10 init_data.xml
[2026-01-26 18:29:01] -rw-r--r-- 1 boinc boinc         0 Jan 26 16:10 boinc_lockfile
[2026-01-26 18:29:01] -rw-r--r-- 1 boinc boinc      2611 Jan 26 16:10 pandaJob.out
[2026-01-26 18:29:01] -rw------- 1 boinc boinc   1006441 Jan 26 16:10 agis_schedconf.cvmfs.json
[2026-01-26 18:29:01] -rw------- 1 boinc boinc   1516246 Jan 26 16:10 agis_ddmendpoints.agis.ALL.json
[2026-01-26 18:29:01] -rw------- 1 boinc boinc       424 Jan 26 16:10 workernode_map.json
[2026-01-26 18:29:01] drwx------ 5 boinc boinc      4096 Jan 26 16:10 pilot3
[2026-01-26 18:29:01] -rw------- 1 boinc boinc 199730544 Jan 26 18:27 HITS.48329654._000039.pool.root.1
[2026-01-26 18:29:01] -rw-r--r-- 1 boinc boinc       529 Jan 26 18:28 boinc_task_state.xml
[2026-01-26 18:29:01] -rw------- 1 boinc boinc      1027 Jan 26 18:28 memory_monitor_summary.json
[2026-01-26 18:29:01] -rw------- 1 boinc boinc    318501 Jan 26 18:28 log.48329654._000039.job.log.tgz.1
[2026-01-26 18:29:01] -rw------- 1 boinc boinc        95 Jan 26 18:28 pilot_heartbeat.json
[2026-01-26 18:29:01] -rw------- 1 boinc boinc      6280 Jan 26 18:28 heartbeat.json
[2026-01-26 18:29:01] -rw-r--r-- 1 boinc boinc      8192 Jan 26 18:28 boinc_mmap_file
[2026-01-26 18:29:01] -rw-r--r-- 1 boinc boinc        27 Jan 26 18:28 wrapper_checkpoint.txt
[2026-01-26 18:29:01] -rw------- 1 boinc boinc      6492 Jan 26 18:29 pilotlog.txt
[2026-01-26 18:29:01] -rw------- 1 boinc boinc   1208817 Jan 26 18:29 log.48329654._000039.job.log.1
[2026-01-26 18:29:01] -rw------- 1 boinc boinc       357 Jan 26 18:29 output.list
[2026-01-26 18:29:01] -rw-r--r-- 1 boinc boinc       620 Jan 26 18:29 runtime_log
[2026-01-26 18:29:01] -rw------- 1 boinc boinc   1546240 Jan 26 18:29 result.tar.gz
[2026-01-26 18:29:01] -rw-r--r-- 1 boinc boinc      8954 Jan 26 18:29 runtime_log.err
[2026-01-26 18:29:01] -rw------- 1 boinc boinc       652 Jan 26 18:29 bzxMDmhEO48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpe8KDmDBc0xn.diag
[2026-01-26 18:29:01] -rw-r--r-- 1 boinc boinc     21638 Jan 26 18:29 stderr.txt
[2026-01-26 18:29:01] HITS file was successfully produced:
[2026-01-26 18:29:01] -rw------- 1 boinc boinc 199730544 Jan 26 18:27 shared/HITS.pool.root.1
[2026-01-26 18:29:01]  *** Contents of shared directory: ***
[2026-01-26 18:29:01] total 462344
[2026-01-26 18:29:01] -rw-r--r-- 2 boinc boinc 271534624 Jan 26 16:10 ATLAS.root_0
[2026-01-26 18:29:01] -rw-r--r-- 2 boinc boinc    597770 Jan 26 16:10 input.tar.gz
[2026-01-26 18:29:01] -rw-r--r-- 2 boinc boinc     15845 Jan 26 16:10 start_atlas.sh
[2026-01-26 18:29:01] -rw------- 1 boinc boinc 199730544 Jan 26 18:27 HITS.pool.root.1
[2026-01-26 18:29:01] -rw------- 1 boinc boinc   1546240 Jan 26 18:29 result.tar.gz
18:29:03 (1240600): run_atlas exited; CPU time 31979.186373
18:29:03 (1240600): called boinc_finish(0)

</stderr_txt>
]]>

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