Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:20:24 (2807390): wrapper (7.7.26015): starting
13:20:24 (2807390): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 13:20:24] Arguments: --nthreads 4
[2026-01-26 13:20:24] Threads: 4
[2026-01-26 13:20:24] Checking for CVMFS
[2026-01-26 13:20:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 13:20:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 13:20:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 13:20:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 13:20:24] 2.11.5.0 3607749 8618 145976 155556 1 50 4067722 4096001 6454 130560 0 23080632 99.996 259570 2356 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-26 13:20:24] CVMFS is ok
[2026-01-26 13:20:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 13:20:24] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-26 13:20:24] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-26 13:20:24] Further information can be found at the LHC@home message board.
[2026-01-26 13:20:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 13:20:24] Checking for apptainer binary...
[2026-01-26 13:20:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 13:20:24] Running /usr/bin/apptainer --version
[2026-01-26 13:20:24] apptainer version 1.4.5
[2026-01-26 13:20:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 13:20:24] x32-linux3
[2026-01-26 13:20:24] apptainer works
[2026-01-26 13:20:24] Set ATHENA_PROC_NUMBER=4
[2026-01-26 13:20:24] Set ATHENA_CORE_NUMBER=4
[2026-01-26 13:20:24] Starting ATLAS job with PandaID=6983466920
[2026-01-26 13:20:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 15:25:54]  *** The last 200 lines of the pilot log: ***
[2026-01-26 15:25:54] 2026-01-26 20:25:00,137 | INFO     | preparing for final server update for job 6983466920 in state='finished'
[2026-01-26 15:25:54] 2026-01-26 20:25:00,137 | INFO     | reading metadata from: /var/lib/boinc-client/slots/3/PanDA_Pilot-6983466920/jobReport.json
[2026-01-26 15:25:54] 2026-01-26 20:25:00,140 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/3/workernode_map.json
[2026-01-26 15:25:54] 2026-01-26 20:25:00,140 | INFO     | this job has now completed (state=finished)
[2026-01-26 15:25:54] 2026-01-26 20:25:00,140 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 15:25:54] 2026-01-26 20:25:00,140 | INFO     | log transfer has been attempted: DONE
[2026-01-26 15:25:54] 2026-01-26 20:25:00,140 | INFO     | job 6983466920 has finished - writing final server update
[2026-01-26 15:25:54] 2026-01-26 20:25:00,141 | INFO     | total number of processed events: 400 (read)
[2026-01-26 15:25:54] 2026-01-26 20:25:00,165 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6983466920/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 15:25:54] 2026-01-26 20:25:00,166 | INFO     | extracted standard info from prmon json
[2026-01-26 15:25:54] 2026-01-26 20:25:00,166 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 15:25:54] 2026-01-26 20:25:00,166 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 15:25:54] 2026-01-26 20:25:00,166 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 15:25:54] 2026-01-26 20:25:00,166 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 15:25:54] 2026-01-26 20:25:00,167 | INFO     | fitting pss+swap vs Time
[2026-01-26 15:25:54] 2026-01-26 20:25:00,168 | INFO     | sum of square deviations: 563026370.5
[2026-01-26 15:25:54] 2026-01-26 20:25:00,168 | INFO     | sum of deviations: -11534572045.00001
[2026-01-26 15:25:54] 2026-01-26 20:25:00,168 | INFO     | mean x: 1769455345.5
[2026-01-26 15:25:54] 2026-01-26 20:25:00,168 | INFO     | mean y: 2386696.295081967
[2026-01-26 15:25:54] 2026-01-26 20:25:00,168 | INFO     | intersect: 36252749436.77374
[2026-01-26 15:25:54] 2026-01-26 20:25:00,168 | INFO     | chi2: 1.3687127078544066
[2026-01-26 15:25:54] 2026-01-26 20:25:00,169 | INFO     | sum of square deviations: 496597218.0
[2026-01-26 15:25:54] 2026-01-26 20:25:00,169 | INFO     | sum of deviations: -10312241174.0
[2026-01-26 15:25:54] 2026-01-26 20:25:00,169 | INFO     | mean x: 1769455193.0
[2026-01-26 15:25:54] 2026-01-26 20:25:00,169 | INFO     | mean y: 2389503.128205128
[2026-01-26 15:25:54] 2026-01-26 20:25:00,169 | INFO     | intersect: 36746551643.80842
[2026-01-26 15:25:54] 2026-01-26 20:25:00,169 | INFO     | chi2: 1.3679351956003822
[2026-01-26 15:25:54] 2026-01-26 20:25:00,169 | INFO     | current chi2=1.3679351956003822 (change=0.05680609594420769 %)
[2026-01-26 15:25:54] 2026-01-26 20:25:00,169 | INFO     | right removable region: 116
[2026-01-26 15:25:54] 2026-01-26 20:25:00,170 | INFO     | sum of square deviations: 496597218.0
[2026-01-26 15:25:54] 2026-01-26 20:25:00,170 | INFO     | sum of deviations: -24303182080.999996
[2026-01-26 15:25:54] 2026-01-26 20:25:00,170 | INFO     | mean x: 1769455498.0
[2026-01-26 15:25:54] 2026-01-26 20:25:00,170 | INFO     | mean y: 2415160.017094017
[2026-01-26 15:25:54] 2026-01-26 20:25:00,170 | INFO     | intersect: 86598548995.22623
[2026-01-26 15:25:54] 2026-01-26 20:25:00,170 | INFO     | chi2: 0.06687053299859969
[2026-01-26 15:25:54] 2026-01-26 20:25:00,170 | INFO     | current chi2=0.06687053299859969 (change=95.11434849586324 %)
[2026-01-26 15:25:54] 2026-01-26 20:25:00,171 | INFO     | sum of square deviations: 435610028.0
[2026-01-26 15:25:54] 2026-01-26 20:25:00,171 | INFO     | sum of deviations: -19996936582.499996
[2026-01-26 15:25:54] 2026-01-26 20:25:00,171 | INFO     | mean x: 1769455650.5
[2026-01-26 15:25:54] 2026-01-26 20:25:00,171 | INFO     | mean y: 2404367.901785714
[2026-01-26 15:25:54] 2026-01-26 20:25:00,171 | INFO     | intersect: 81230315008.64299
[2026-01-26 15:25:54] 2026-01-26 20:25:00,171 | INFO     | chi2: 0.061203045197896246
[2026-01-26 15:25:54] 2026-01-26 20:25:00,171 | INFO     | current chi2=0.061203045197896246 (change=8.475314232686198 %)
[2026-01-26 15:25:54] 2026-01-26 20:25:00,171 | INFO     | left removable region: 20
[2026-01-26 15:25:54] 2026-01-26 20:25:00,172 | INFO     | sum of square deviations: 274312120.0
[2026-01-26 15:25:54] 2026-01-26 20:25:00,172 | INFO     | sum of deviations: -12739147798.5
[2026-01-26 15:25:54] 2026-01-26 20:25:00,172 | INFO     | mean x: 1769455772.5
[2026-01-26 15:25:54] 2026-01-26 20:25:00,172 | INFO     | mean y: 2391523.65625
[2026-01-26 15:25:54] 2026-01-26 20:25:00,172 | INFO     | intersect: 82176517146.63817
[2026-01-26 15:25:54] 2026-01-26 20:25:00,172 | INFO     | chi2: 0.04653366292280318
[2026-01-26 15:25:54] 2026-01-26 20:25:00,172 | INFO     | current memory leak: -46.44 B/s (using 96 data points, chi2=0.05)
[2026-01-26 15:25:54] 2026-01-26 20:25:00,173 | INFO     | could have reported an average CPU frequency of 3916 MHz (8 samples)
[2026-01-26 15:25:54] 2026-01-26 20:25:00,173 | INFO     | ..............................
[2026-01-26 15:25:54] 2026-01-26 20:25:00,173 | INFO     | . Timing measurements:
[2026-01-26 15:25:54] 2026-01-26 20:25:00,173 | INFO     | . get job = 0 s
[2026-01-26 15:25:54] 2026-01-26 20:25:00,173 | INFO     | . initial setup = 5 s
[2026-01-26 15:25:54] 2026-01-26 20:25:00,173 | INFO     | . payload setup = 4 s
[2026-01-26 15:25:54] 2026-01-26 20:25:00,173 | INFO     | . stage-in = 0 s
[2026-01-26 15:25:54] 2026-01-26 20:25:00,173 | INFO     | . payload execution = 7441 s
[2026-01-26 15:25:54] 2026-01-26 20:25:00,173 | INFO     | . stage-out = 0 s
[2026-01-26 15:25:54] 2026-01-26 20:25:00,173 | INFO     | . log creation = 0 s
[2026-01-26 15:25:54] 2026-01-26 20:25:00,173 | INFO     | ..............................
[2026-01-26 15:25:54] 2026-01-26 20:25:00,235 | INFO     | 
[2026-01-26 15:25:54] 2026-01-26 20:25:00,236 | INFO     | job summary report
[2026-01-26 15:25:54] 2026-01-26 20:25:00,236 | INFO     | --------------------------------------------------
[2026-01-26 15:25:54] 2026-01-26 20:25:00,236 | INFO     | PanDA job id: 6983466920
[2026-01-26 15:25:54] 2026-01-26 20:25:00,236 | INFO     | task id: 48318034
[2026-01-26 15:25:54] 2026-01-26 20:25:00,236 | INFO     | errors: (none)
[2026-01-26 15:25:54] 2026-01-26 20:25:00,236 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 15:25:54] 2026-01-26 20:25:00,236 | INFO     | pilot state: finished 
[2026-01-26 15:25:54] 2026-01-26 20:25:00,236 | INFO     | transexitcode: 0
[2026-01-26 15:25:54] 2026-01-26 20:25:00,236 | INFO     | exeerrorcode: 0
[2026-01-26 15:25:54] 2026-01-26 20:25:00,236 | INFO     | exeerrordiag: 
[2026-01-26 15:25:54] 2026-01-26 20:25:00,236 | INFO     | exitcode: 0
[2026-01-26 15:25:54] 2026-01-26 20:25:00,236 | INFO     | exitmsg: OK
[2026-01-26 15:25:54] 2026-01-26 20:25:00,236 | INFO     | cpuconsumptiontime: 28456 s
[2026-01-26 15:25:54] 2026-01-26 20:25:00,236 | INFO     | nevents: 400
[2026-01-26 15:25:54] 2026-01-26 20:25:00,236 | INFO     | neventsw: 0
[2026-01-26 15:25:54] 2026-01-26 20:25:00,236 | INFO     | pid: 2815796
[2026-01-26 15:25:54] 2026-01-26 20:25:00,236 | INFO     | pgrp: 2815796
[2026-01-26 15:25:54] 2026-01-26 20:25:00,237 | INFO     | corecount: 4
[2026-01-26 15:25:54] 2026-01-26 20:25:00,237 | INFO     | event service: False
[2026-01-26 15:25:54] 2026-01-26 20:25:00,237 | INFO     | sizes: {0: 2283946, 1: 2284208, 11: 2284236, 7449: 2311725, 7450: 2320737, 7452: 2320793, 7453: 2321115}
[2026-01-26 15:25:54] 2026-01-26 20:25:00,237 | INFO     | --------------------------------------------------
[2026-01-26 15:25:54] 2026-01-26 20:25:00,237 | INFO     | 
[2026-01-26 15:25:54] 2026-01-26 20:25:00,237 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2026-01-26 15:25:54] 2026-01-26 20:25:00,253 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 15:25:54] 2026-01-26 20:25:00,253 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 15:25:54] 2026-01-26 20:25:00,253 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 15:25:54] 2026-01-26 20:25:00,253 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 15:25:54] 2026-01-26 20:25:00,254 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 15:25:54] 2026-01-26 20:25:00,254 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 15:25:54] 2026-01-26 20:25:00,254 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 15:25:54] 2026-01-26 20:25:00,254 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 15:25:54] 2026-01-26 20:25:00,254 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 15:25:54] 2026-01-26 20:25:00,254 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 15:25:54] 2026-01-26 20:25:00,254 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 15:25:54] 2026-01-26 20:25:00,254 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 15:25:54] 2026-01-26 20:25:00,254 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 15:25:54] 2026-01-26 20:25:00,254 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 15:25:54] 2026-01-26 20:25:00,254 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 15:25:54] 2026-01-26 20:25:00,254 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 15:25:54] 2026-01-26 20:25:00,254 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 15:25:54] 2026-01-26 20:25:00,254 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 15:25:54] 2026-01-26 20:25:00,254 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 15:25:54] 2026-01-26 20:25:00,254 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 15:25:54] 2026-01-26 20:25:00,255 | INFO     | job 6983466920 has completed (purged errors)
[2026-01-26 15:25:54] 2026-01-26 20:25:00,255 | INFO     | overall cleanup function is called
[2026-01-26 15:25:54] 2026-01-26 20:25:00,960 | INFO     | PID=2811233 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 15:25:54] 2026-01-26 20:25:00,960 | INFO     | .. there are 8 such processes running
[2026-01-26 15:25:54] 2026-01-26 20:25:01,262 | INFO     | --- collectZombieJob: --- 10, [2815796]
[2026-01-26 15:25:54] 2026-01-26 20:25:01,262 | INFO     | zombie collector waiting for pid 2815796
[2026-01-26 15:25:54] 2026-01-26 20:25:01,262 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 15:25:54] 2026-01-26 20:25:01,262 | INFO     | collected zombie processes
[2026-01-26 15:25:54] 2026-01-26 20:25:01,262 | INFO     | will attempt to kill all subprocesses of pid=2815796
[2026-01-26 15:25:54] 2026-01-26 20:25:01,394 | INFO     | process IDs to be killed: [2815796] (in reverse order)
[2026-01-26 15:25:54] 2026-01-26 20:25:01,446 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 15:25:54] 2026-01-26 20:25:01,447 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 15:25:54] 2026-01-26 20:25:01,451 | INFO     | did not find any defunct processes belonging to 2815796
[2026-01-26 15:25:54] 2026-01-26 20:25:01,454 | INFO     | did not find any defunct processes belonging to 2815796
[2026-01-26 15:25:54] 2026-01-26 20:25:01,455 | INFO     | ready for new job
[2026-01-26 15:25:54] 2026-01-26 20:25:01,455 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 15:25:54] 2026-01-26 20:25:01,456 | INFO     | **************************************
[2026-01-26 15:25:54] 2026-01-26 20:25:01,456 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 15:25:54] 2026-01-26 20:25:01,456 | INFO     | **************************************
[2026-01-26 15:25:54] 2026-01-26 20:25:01,456 | INFO     | 
[2026-01-26 15:25:54] 2026-01-26 20:25:01,474 | INFO     | architecture information:
[2026-01-26 15:25:54] 2026-01-26 20:25:01,474 | INFO     | executing command: cat /etc/os-release
[2026-01-26 15:25:54] 2026-01-26 20:25:01,487 | INFO     | cat /etc/os-release:
[2026-01-26 15:25:54] NAME="CentOS Linux"
[2026-01-26 15:25:54] VERSION="7 (Core)"
[2026-01-26 15:25:54] ID="centos"
[2026-01-26 15:25:54] ID_LIKE="rhel fedora"
[2026-01-26 15:25:54] VERSION_ID="7"
[2026-01-26 15:25:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 15:25:54] ANSI_COLOR="0;31"
[2026-01-26 15:25:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 15:25:54] HOME_URL="https://www.centos.org/"
[2026-01-26 15:25:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 15:25:54] 
[2026-01-26 15:25:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 15:25:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 15:25:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 15:25:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 15:25:54] 
[2026-01-26 15:25:54] 2026-01-26 20:25:01,487 | INFO     | **************************************
[2026-01-26 15:25:54] 2026-01-26 20:25:01,988 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-01-26 15:25:54] 2026-01-26 20:25:02,004 | INFO     | sufficient remaining disk space (380768354304 B)
[2026-01-26 15:25:54] 2026-01-26 20:25:02,004 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 15:25:54] 2026-01-26 20:25:02,004 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 15:25:54] 2026-01-26 20:25:02,004 | INFO     | update_server=False
[2026-01-26 15:25:54] 2026-01-26 20:25:02,004 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 15:25:54] 2026-01-26 20:25:02,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 15:25:54] 2026-01-26 20:25:02,560 | INFO     | all data control threads have been joined
[2026-01-26 15:25:54] 2026-01-26 20:25:02,592 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 15:25:54] 2026-01-26 20:25:02,593 | INFO     | aborting loop
[2026-01-26 15:25:54] 2026-01-26 20:25:02,624 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 15:25:54] 2026-01-26 20:25:03,008 | INFO     | [job] retrieve thread has finished
[2026-01-26 15:25:54] 2026-01-26 20:25:03,009 | INFO     | [job] queue monitor thread has finished
[2026-01-26 15:25:54] 2026-01-26 20:25:03,062 | INFO     | all job control threads have been joined
[2026-01-26 15:25:54] 2026-01-26 20:25:03,104 | INFO     | [data] copytool_in thread has finished
[2026-01-26 15:25:54] 2026-01-26 20:25:03,318 | INFO     | all payload control threads have been joined
[2026-01-26 15:25:54] 2026-01-26 20:25:03,564 | INFO     | [data] control thread has finished
[2026-01-26 15:25:54] 2026-01-26 20:25:03,596 | INFO     | [job] job monitor thread has finished
[2026-01-26 15:25:54] 2026-01-26 20:25:03,748 | INFO     | [job] validate thread has finished
[2026-01-26 15:25:54] 2026-01-26 20:25:03,840 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 15:25:54] 2026-01-26 20:25:03,950 | INFO     | [payload] validate_post thread has finished
[2026-01-26 15:25:54] 2026-01-26 20:25:03,988 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 15:25:54] 2026-01-26 20:25:04,064 | INFO     | [job] control thread has finished
[2026-01-26 15:25:54] 2026-01-26 20:25:04,321 | INFO     | [payload] control thread has finished
[2026-01-26 15:25:54] 2026-01-26 20:25:04,405 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 15:25:54] 2026-01-26 20:25:04,444 | INFO     | [payload] failed_post thread has finished
[2026-01-26 15:25:54] 2026-01-26 20:25:04,630 | INFO     | [data] copytool_out thread has finished
[2026-01-26 15:25:54] 2026-01-26 20:25:05,106 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 15:25:54] 2026-01-26 20:25:09,111 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 15:25:54] 2026-01-26 20:25:12,532 | INFO     | job.realtimelogging is not enabled
[2026-01-26 15:25:54] 2026-01-26 20:25:13,536 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 15:25:54] 2026-01-26 20:25:33,200 | INFO     | PID=2811233 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 15:25:54] 2026-01-26 20:25:33,200 | INFO     | .. there are 8 such processes running
[2026-01-26 15:25:54] 2026-01-26 20:25:33,201 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 15:25:54] 2026-01-26 20:25:33,201 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 15:25:54] 2026-01-26 20:25:33,201 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 15:25:54] 2026-01-26 20:25:48,172 | INFO     | [monitor] cgroup control has ended
[2026-01-26 15:25:54] 2026-01-26 20:25:49,536 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139695132305216)>', '<ExcThread(monitor, started 139694834685696)>']
[2026-01-26 15:25:54] 2026-01-26 20:25:50,273 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 15:25:54] 2026-01-26 20:25:50,274 | INFO     | [monitor] control thread has ended
[2026-01-26 15:25:54] 2026-01-26 20:25:54,560 | INFO     | all workflow threads have been joined
[2026-01-26 15:25:54] 2026-01-26 20:25:54,561 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 15:25:54] 2026-01-26 20:25:54,561 | INFO     | traces error code: 0
[2026-01-26 15:25:54] 2026-01-26 20:25:54,561 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 15:25:54] 2026-01-26 20:25:54,645 [wrapper] ==== pilot stdout END ====
[2026-01-26 15:25:54] 2026-01-26 20:25:54,647 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 15:25:54] 2026-01-26 20:25:54,649 [wrapper] pilotpid: 2811233
[2026-01-26 15:25:54] 2026-01-26 20:25:54,651 [wrapper] Pilot exit status: 0
[2026-01-26 15:25:54] 2026-01-26 20:25:54,659 [wrapper] pandaids: 6983466920
[2026-01-26 15:25:54] 2026-01-26 20:25:54,693 [wrapper] cleanup supervisor_pilot 2876186 2811234
[2026-01-26 15:25:54] 2026-01-26 20:25:54,696 [wrapper] Test setup, not cleaning
[2026-01-26 15:25:54] 2026-01-26 20:25:54,698 [wrapper] apfmon messages muted
[2026-01-26 15:25:54] 2026-01-26 20:25:54,700 [wrapper] ==== wrapper stdout END ====
[2026-01-26 15:25:54] 2026-01-26 20:25:54,702 [wrapper] ==== wrapper stderr END ====
[2026-01-26 15:25:54]  *** Error codes and diagnostics ***
[2026-01-26 15:25:54]     "exeErrorCode": 0,
[2026-01-26 15:25:54]     "exeErrorDiag": "",
[2026-01-26 15:25:54]     "pilotErrorCode": 0,
[2026-01-26 15:25:54]     "pilotErrorDiag": "",
[2026-01-26 15:25:54]  *** Listing of results directory ***
[2026-01-26 15:25:54] total 671952
[2026-01-26 15:25:54] -rwx------ 1 boinc boinc     36322 Jan 25 17:57 runpilot2-wrapper.sh
[2026-01-26 15:25:54] -rw-r--r-- 1 boinc boinc      5111 Jan 25 17:58 queuedata.json
[2026-01-26 15:25:54] -rw-r--r-- 1 boinc boinc    584422 Jan 25 18:00 pilot3.tar.gz
[2026-01-26 15:25:54] -rw-r--r-- 1 boinc boinc       100 Jan 26 13:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 15:25:54] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 13:20 run_atlas
[2026-01-26 15:25:54] -rw-r--r-- 1 boinc boinc       105 Jan 26 13:20 job.xml
[2026-01-26 15:25:54] -rw-r--r-- 2 boinc boinc     15845 Jan 26 13:20 start_atlas.sh
[2026-01-26 15:25:54] drwxrwx--x 2 boinc boinc      4096 Jan 26 13:20 shared
[2026-01-26 15:25:54] -rw-r--r-- 2 boinc boinc    597763 Jan 26 13:20 input.tar.gz
[2026-01-26 15:25:54] -rw-r--r-- 1 boinc boinc      9156 Jan 26 13:20 init_data.xml
[2026-01-26 15:25:54] -rw-r--r-- 2 boinc boinc 501012596 Jan 26 13:20 EVNT.48318032._000033.pool.root.1
[2026-01-26 15:25:54] -rw-r--r-- 1 boinc boinc         0 Jan 26 13:20 boinc_setup_complete
[2026-01-26 15:25:54] -rw-r--r-- 1 boinc boinc         0 Jan 26 13:20 boinc_lockfile
[2026-01-26 15:25:54] -rw-r--r-- 1 boinc boinc      2533 Jan 26 13:20 pandaJob.out
[2026-01-26 15:25:54] -rw------- 1 boinc boinc   1006384 Jan 26 13:20 agis_schedconf.cvmfs.json
[2026-01-26 15:25:54] -rw------- 1 boinc boinc   1516246 Jan 26 13:20 agis_ddmendpoints.agis.ALL.json
[2026-01-26 15:25:54] -rw------- 1 boinc boinc       424 Jan 26 13:20 workernode_map.json
[2026-01-26 15:25:54] drwx------ 5 boinc boinc      4096 Jan 26 13:20 pilot3
[2026-01-26 15:25:54] -rw------- 1 boinc boinc 180263467 Jan 26 15:24 HITS.48318034._001646.pool.root.1
[2026-01-26 15:25:54] -rw-r--r-- 1 boinc boinc       530 Jan 26 15:24 boinc_task_state.xml
[2026-01-26 15:25:54] -rw------- 1 boinc boinc      1024 Jan 26 15:24 memory_monitor_summary.json
[2026-01-26 15:25:54] -rw------- 1 boinc boinc    341253 Jan 26 15:24 log.48318034._001646.job.log.tgz.1
[2026-01-26 15:25:54] -rw------- 1 boinc boinc      6295 Jan 26 15:25 heartbeat.json
[2026-01-26 15:25:54] -rw------- 1 boinc boinc        95 Jan 26 15:25 pilot_heartbeat.json
[2026-01-26 15:25:54] -rw-r--r-- 1 boinc boinc      8192 Jan 26 15:25 boinc_mmap_file
[2026-01-26 15:25:54] -rw-r--r-- 1 boinc boinc        27 Jan 26 15:25 wrapper_checkpoint.txt
[2026-01-26 15:25:54] -rw------- 1 boinc boinc      4899 Jan 26 15:25 pilotlog.txt
[2026-01-26 15:25:54] -rw------- 1 boinc boinc   1086342 Jan 26 15:25 log.48318034._001646.job.log.1
[2026-01-26 15:25:54] -rw------- 1 boinc boinc       357 Jan 26 15:25 output.list
[2026-01-26 15:25:54] -rw-r--r-- 1 boinc boinc       620 Jan 26 15:25 runtime_log
[2026-01-26 15:25:54] -rw------- 1 boinc boinc   1443840 Jan 26 15:25 result.tar.gz
[2026-01-26 15:25:54] -rw------- 1 boinc boinc       644 Jan 26 15:25 veHKDmVEO48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmp21KDmK7ndbn.diag
[2026-01-26 15:25:54] -rw-r--r-- 1 boinc boinc      8891 Jan 26 15:25 runtime_log.err
[2026-01-26 15:25:54] -rw-r--r-- 1 boinc boinc     21425 Jan 26 15:25 stderr.txt
[2026-01-26 15:25:54] HITS file was successfully produced:
[2026-01-26 15:25:54] -rw------- 1 boinc boinc 180263467 Jan 26 15:24 shared/HITS.pool.root.1
[2026-01-26 15:25:54]  *** Contents of shared directory: ***
[2026-01-26 15:25:54] total 667332
[2026-01-26 15:25:54] -rw-r--r-- 2 boinc boinc     15845 Jan 26 13:20 start_atlas.sh
[2026-01-26 15:25:54] -rw-r--r-- 2 boinc boinc    597763 Jan 26 13:20 input.tar.gz
[2026-01-26 15:25:54] -rw-r--r-- 2 boinc boinc 501012596 Jan 26 13:20 ATLAS.root_0
[2026-01-26 15:25:54] -rw------- 1 boinc boinc 180263467 Jan 26 15:24 HITS.pool.root.1
[2026-01-26 15:25:54] -rw------- 1 boinc boinc   1443840 Jan 26 15:25 result.tar.gz
15:25:55 (2807390): run_atlas exited; CPU time 28538.339430
15:25:55 (2807390): called boinc_finish(0)

</stderr_txt>
]]>

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